New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2049203	49 (0.940)	3 (0.060)	3/254	NT	6.0%	coding (69/372 nt)	PP_1822	hypothetical protein
	?	NC_002947	= 2049243	48 (0.970)					coding (29/372 nt)	PP_1822	hypothetical protein

GGCGGGTTTTGACACAGAACGGGCAGGCGTGGAACTGGTACAGCGCCAGCCCCTTGGCCGCTTGCTCGATGCGGGCCTGGGCGGCGGCGTCGCGTTTGCGCTTGGCCGGGCGGCTGATCCAGTCACCGAAGACGATGAGCTGGCCGAGGCCAACCCGCAGGGCTTTGACGATCATGGGCAACTCCTGAAATGCAAAAGCCGACCCTGAAGGGTCGGCTCGGGGCCAGC‑AACCAATCACTTGATCAGGCTGAGGAACTCGCTGCGGGTGGCGGCGTTGTCGCGGAACTCACCCAGC  >  NC_002947/2049097‑2049391                                                                                                                                                   |                                                                                                                                                      ggcggGTTTTGACACAGAACGGGCAGGCGTGGAACTGGTACAGCGCCAGCCCCTTGGCCGCTTGCTCGATGCGGGCCTGGGCGGCGGCGTCGCGTTTGCGCTTGGCCGGGCGGCTGATCCAGTCACCGAAGACGATGAGCTGGCCGAgg                                                                                                                                                     >  3:302901‑M2/1‑147 (MQ=255)      gTTTTGACACAGAACGGGCAGGCGTGGAACTGGTACAGCGCCAGCCCCTTGGCCGCTTGCTCGATGCGGGCCTGGGCGGCGGCGTCGCGTTTGCGCTTGGCCGGGCGGCTGATCCAGTCACCGAAGACGATGAGCTGGCCGAGGCCAAc                                                                                                                                                >  2:27739/1‑149 (MQ=255)            acacAGAACGGGCAGGCGTGGAACTGGTACAGCGCCAGCCCCTTGGCCGCTTGCTCGATGCGGGCCTGGGCGGCGGCGTCGCGTTTGCGCTTGGCCGGGCGGCTGATCCAGTCACCGAAGACGATGAGCTGGCCGAGGCCAACCCGCAg                                                                                                                                          <  4:209761/149‑1 (MQ=255)             cacaGAACGGGCAGGCGTGGAACTGGTACAGCGCCAGCCCCTTGGCCGCTTGCTCGATGCGGGCCTGGGCGGCGGCGTCGCGTTTGCGCTTGGCCGGGCGGCTGATCCAGTCACCGAAGACGATGAGCTGGCCGAGGCCAACCCGCAgg                                                                                                                                         >  3:14440/1‑149 (MQ=255)              acaGAACGGGCAGGCGTGGAACTGGTACAGCGCCAGCCCCTTGGCCGCTTGCTCGATGCGGGCCTGGGCGGCGGCGTCGCGTTTGCGCTTGGCCGGGCGGCTGATCCAGTCACCGAAGACGATGAGCTGGCCGAGGCCAACCCGCAggg                                                                                                                                        <  5:317788/149‑1 (MQ=255)                  aaCGGGCAGGCGTGGAACTGGTACAGCGCCAGCCCCTTGGCCGCTTGCTCGATGCGGGCCTGGGCGGCGGCGTCGCGTTTGCGCTTGGCCGGGCGGCTGATCCAGTCACCGAAGACGATGAGCTGGCCGAGGCCAACCCGCAGGGCttt                                                                                                                                    <  4:14440/149‑1 (MQ=255)                           gCGTGGAACTGGTACAGCGCCAGCCCCTTGGCCGCTTGCTCGATGCGGGCCTGGGCGGCGGCGTCGCGTTTGCGCTTGGCCGGGCGGCTGATCCAGTCACCGAAGACGATGAGCTGGCCGAGGCCAACCCGCAGGGCTTTGACGATCAt                                                                                                                           >  1:164149/1‑149 (MQ=255)                             gTGGAACTGGTACAGCGCCAGCCCCTTGGCCGCTTGCTCGATGCGGGCCTGGGCGGCGGCGTCGCGTTTGCGCTTGGCCGGGCGGCTGATCCAGTCACCGAAGACGATGAGCTGGCCGAGGCCAACCCGCAGGGCTTTGACGATCATgg                                                                                                                         <  8:278098/149‑1 (MQ=255)                             gTGGAACTGGTACAGCGCCAGCCCCTTGGCCGCTTGCTCGATGCGGGCCTGGGCGGCGGCGTCGCGTTTGCGCTTGGCCGGGCGGCTGATCCAGTCACCGAAGACGATGAGCTGGCCGAGGCCAACCCGCAGGGCTTTGACGATCATgg                                                                                                                         >  3:21756/1‑149 (MQ=255)                              tGGAACTGGTACAGCGCCAGCCCCTTGGCCGCTTGCTCGATGCGGGCCTGGGCGGCGGCGTCGCGTTTGCGCTTGGCCGGGCGGCTGATCCAGTCACCGAAGACGATGAGCTGGCCGAGGCCAACCCGCAGGGCTTTGACGATCATggg                                                                                                                        >  1:34401/1‑149 (MQ=255)                               ggAACTGGTACAGCGCCAGCCCCTTGGCCGCTTGCTCGATGCGGGCCTGGGCGGCGGCGTCGCGTTTGCGCTTGGCCGGGCGGCTGATCCAGTCACCGAAGACGATGAGCTGGCCGAGGCCAACCCGCAGGGCTTTGACGATc                                                                                                                             <  8:259073/143‑1 (MQ=255)                               ggAACTGGTACAGCGCCAGCCCCTTGGCCGCTTGCTCGATGCGGGCCTGGGCGGCGGCGTCGCGTTTGCGCTTGGCCGGGCGGCTGATCCAGTCACCGAAGACGATGAGCTGGCCGAGGCCAACCCGCAGGGCTTTGACGATc                                                                                                                             >  7:259073/1‑143 (MQ=255)                                 aaCTGGTACAGCGCCAGCCCCTTGGCCGCTTGCTCGATGCGGGCCTGGGCGGCGGCGTCGCGTTTGCGCTTGGCCGGGCGGCTGATCCAGTCACCGAAGACGATGAGCTGGCCGAGGCCAACCCGCAGGGCTTTGACGATCATGGGCaa                                                                                                                     >  5:114735/1‑149 (MQ=255)                                    tGGTACAGCGCCAGCCCCTTGGCCGCTTGCTCGATGCGGGCCTGGGCGGCGGCGTCGCGTTTGCGCTTGGCCGGGCGGCTGATCCAGTCACCGAAGACGATGAGCTGGCCGAGGCCAACACGCAGGGCTTTCACGATCATGGGCAACTc                                                                                                                  >  5:195352/1‑149 (MQ=255)                                     ggTACAGCGCCAGCCCCTTGGCCGCTTGCTCGATGCGGGCCTGGGCGGCGGCGTCGCGTTTGCGCTTGGCCGGGCGGCTGATCCAGTCACCGAAGACGATGAGCTGGCCGAGGCCAACCCGCAGGGCTTTGACGATCATGTGCAACTcc                                                                                                                 >  8:54349/1‑149 (MQ=255)                                      gTACAGCGCCAGCCCCTTGGCCGCTTGCTCGATGCGGGCCTGGGCGGCGGCGTCGCGTTTGCGCTTGGCCGGGCGGCTGATCCAGTCACCGAAGACGATGAGCTGGCCGAGGCCAACCCGCAGGGCTTTGACGATCATGGGCAACTCCt                                                                                                                >  6:286774/1‑149 (MQ=255)                                       tACAGCGCCAGCCCCTTGGCCGCTTGCTCGATGCGGGCCTGGGCGGCGGCGTCGCGTTTGCGCTTGGCCGGGCGGCTGATCCAGTCACCGAAGACGATGAGCTGGCCGAGGCCAACCCGCAGGGCTTTGACGATCATGGGCAACTCCt                                                                                                                >  8:107578/1‑148 (MQ=255)                                        aCAGCGCCAGCCCCTTGGCCGCTTGCTCGATGCGGGCCTGGGCGGCGGCGTCGCGTTTGCGCTTGGCCGGGCGGCTGATCCAGTCACCGAAGACGATGAGCTGGCCGAGGCCAACCCGCAGGGCTTTGACGATCATGGGCAACTCCTg                                                                                                               >  4:72141/1‑148 (MQ=255)                                           gcgcCAGCCCCTTGGCCGCTTGCTCGATGCGGGCCTGGGCGGCGGCGTCGCGTTTGCGCTTGGCCGGGCGGCTGATCCAGTCACCGAAGACGATGAGCTGGCCGAGGCCAACCCGCAGGGCTTTGACGATCATGGGCAACTCCTGAAAt                                                                                                           <  5:308012/149‑1 (MQ=255)                                           gcgcCAGCCCCTTGGCCGCTTGCTCGATGCGGGCCTGGGCGGCGGCGTCGCGTTTGCGCTTGGCCGGGCGGCTGATCCAGTCACCGAAGACGATGAGCTGGCCGAGGCCAACCCGCAGGGCTTTGACGATCATGGGCAACTCCTGAAAt                                                                                                           <  7:107578/149‑1 (MQ=255)                                                         gCCGCTTGCTCGATGCGGGCCTGGGCGGCGGCGTCGCGTTTGCGCTTGGCCGGGCGGCTGATCCAGTCACCGAAGACGATGAGCTGGCCGAGGCCAACCCGCAGGGCTTTGACGATCATGGGCAACTCCTGAAATGCAAAAGCCGAcc                                                                                              <  6:108853/148‑1 (MQ=255)                                                            gatctcTCGATGCGGGCCTGGGCGGCGGCGTCGCGTTTGCGCTTGGCCGGGCGGCTGATCCAGTCACCGAAGACGATGAGCTGGCCGAGGCCAACCCGCAGGGCTTTGACGATCATGGGCAACTCCTGAAATGCAAGAGCCGACCCttc                                                                                          <  1:116946/144‑3 (MQ=255)                                                                 cTCGATGCGGGCCTGGGCGGCGGCGTCGCGTTTGCGCTTGGCCGGGCGGCTGATCCAGTCACCGAAGACGATGAGCTGGCCGAGGCCAACCCGCAGGGCTTTGACGATCATGGGCAACTCCTGAAATGCAAAAGCCGACCCTGAAggg                                                                                      <  2:164149/148‑1 (MQ=255)                                                                 cTCGATGCGGGCCTGGGCGGCGGCGTCGCGTTTGCGCTTGGCCGGGCGGCTGATCCAGTCACCGAAGACGATGAGCTGGCCGAGGCCAACCCGCAGGGCTTTGACGATCATGGGCAACTCCTGAAATGCAAAAGCCGACCCTGAAGGGt                                                                                     <  7:10775/149‑1 (MQ=255)                                                                  tCGATGCGGGCCTGGGCGGCGGCGTCGCGTTTGCGCTTGGCCGGGCGGCTGATCCAGTCACCGAAGACGATGAGCTGGCCGAGGCCAACCCGCAGGGCTTTGACGATCATGGGCAACTCCTGAAATGCAAGAGCCGACCCttc                                                                                          >  2:116946/1‑141 (MQ=255)                                                                  tCGATGCGGGCCTGGGCGGCGGCGTCGCGTTTGCGCATGGCCGGGCGGCTCATCCAGTCACCGAAGACGATGAGCTTGAAGAGGCCAACCCGCAGGGCTTTGACGATAATGGGCAACTACTGAAATGCAAAAGCCGACCCTGAAGGGTc                                                                                    >  6:331737/1‑149 (MQ=255)                                                                    gATGCGGGCCTGGGCGGCGGCGTCGCGTTTGCGCTTGGCCGGGCGGCTGATCCAGTCACCGAAGACGATGAGCTGGCCGAGGCCAACCCGCAGGGCTTTGACGATCATGGGCAACTCCTGAAATGCAAAAGCCGACCCTGAAGGGTc                                                                                    >  7:59287/1‑147 (MQ=255)                                                                    gATGCGGGCCTGGGCGGCGGCGTCGCGTTTGCGCTTGGCCGGGCGGCTGATCCAGTCACCGAAGACGATGAGCTGGCCGAGGCCAACCCGCAGGGCTTTGACGATCATGGGCAACTCCTGAAATGCAAAAGCCGACCCTGAAGGGTc                                                                                    <  8:59287/147‑1 (MQ=255)                                                                         gggCCTGGGCGGCGGCGTCGCGTTTGCGCTTGGCCGGGCGGCTGATCCAGTCACCGAAGACGATGAGCTGGCCGAGGCCAACCCGCAGGGCTTTGACGATCATGGGCAACTCCTGAAATGCAAAAGCCGACCCTTCAGGGTCGGCtttt                                                                             <  6:195352/149‑4 (MQ=255)                                                                         gggCCTGGGCGGCGGCGTCGCGTTTGCGCTTGGCCGGGCGGCTGATCCAGTCACCGAAGACGATGAGCTGGCCGAGGCCAACCCGCAGGGCTTTGACGATCATGGGCAACTCCTGAAATGCAAAAGCCGACCCTGAATGGTCGGCTCgg                                                                             >  6:191712/1‑149 (MQ=255)                                                                         gggCCTGGGCGGCGGCGTCGCGTTTGCGCTTGGCCGGGCGGCTGATCCAGTCACCGAAGACGATGAGCTGGCCGAGGCCAACCCGCAGGGCTTTGACGATCATGGGCAACTCCTGAAATGCAAAAGCCGACCCTGAAGGGTCGGCTCgg                                                                             <  2:34401/149‑1 (MQ=255)                                                                                   ggcggcgTCGCGTTTGCGCTTGGCCGGGCGGCTGATCCAGTCACCGAAGACGATGAGCTGGCCGAGGCCAACCCGCAGGGCTTTGACGATCATGGGCAACTCCTGAAATGCAAAAGCCGACCCTGAAGGGTCGGCTCGGGGCCAGC‑AAc                                                                  <  5:100689/149‑1 (MQ=255)                                                                                   ggcggcgTCGCGTTGGCGCTTGGCCGGGCGGCTGATCCAGTCACCGAAGACGATGAGCTGGCCGAGGCCAACCCGCAGGGCTTTGACGATCATGGGCAACTCCTGAAATGCAAAAGCCGACCCTGAAGGGTCGGCTCGGGGCCAGC‑AAc                                                                  <  7:205222/149‑1 (MQ=255)                                                                                        cgTCGCGTTTGCGCTTGGCCGGGCGGCTGATCCAGTCACCGAAGACGATGAGCTGGCCGAGGCCAACCCGCAGGGCTTTGACGATCATGGGCAACTCCTGAAATGCAAAAGCCGACCCTGAAGGGTCGGCTCGGGGCCAGC‑AACCAATc                                                             <  4:21756/149‑1 (MQ=255)                                                                                         gTCGCGTTTGCGCTTGGCCGGGCGGCTGATCAAGTCACCGAAGACGATGAGCTGGCCGAGGCCAACCCGCAGGGCTTTGACGATCATGGGCAACTCCTGAAATGCAAAAGCCGACCCTGAAGGGTCGGCTCGGGGCCAGC‑AACCAATCa                                                            >  8:113303/1‑149 (MQ=255)                                                                                                 tGCGCTTGGCCGGGCGGCTGATCCAGTCACCGAAGACGATGAGCTGGCCGAGGCCAACCCGCAGGGCTTTGACGATCATGGGCAACTCCTTAAATGCAAAAGCCGACCCTGAAGGGTCGGCTCGGGGCCAGC‑AACCAATCACTTGATc                                                     <  8:298414/148‑1 (MQ=255)                                                                                                    gcTTGGCCGGGCGGCTGATCCAGTCACCGAAGACGATGAGCTGGCCGAggccaagcgcaaacgcgacgccgccgcccaggcccgcatcgagcaagcggccaaggggctggcgctgtaccagttccacgcctgcccgttctgtgtcaaaa                                                  <  7:82873‑M2/149‑102 (MQ=255)                                                                                                     cTTGGCCGGGCGGCTGATCCAGTCACCGAAGACGATGAGCTGGCCGAggccaagcgcaaacgcgacgccgccgcccaggcccgcatc                                                                                                               >  4:199655‑M2/1‑47 (MQ=255)                                                                                                     cTTGGCCGGGCGGCTGATCCAGTCACCGAAGACGATGAGCTGGCCGAggccaagcgcaaacgcgacgccgccgcccaggcccgcatc                                                                                                               <  3:199655‑M2/87‑41 (MQ=255)                                                                                                     cTTGGCCGGGCGGCTGATCCAGTCACCGAAGACGATGAGCTGGCCGAGGCCAACCCGCAGGGCTTTGACGATCATGGGCAACTCCTGAAATGCAAAAGCCGACCCTGAAGGGTCGGCTCGGGGCCAGC‑AACCAATCACTTGATCAGGCt                                                >  3:263613/1‑149 (MQ=255)                                                                                                      ttGGCCGGGCGGCTGATCCAGTCACCGAAGACGATGAGCTGGCCGAGGCCAACCCGCAGGGCTTTGACGATCATGGGCAACTCATGAATTGCAAAAGCCGACCCTGAAGGGTCGGCTCGGGGCCCGC‑AACCAAGCCCGTGATCAGGCTg                                               >  6:26824/1‑149 (MQ=255)                                                                                                         gCCGGGCGGCTGATCCAGTCACCGAAGACGATGAGCTGGCCGAGGCCAACCAGCAGGGCTTTGACGATCATGGGCAACTCCTGAAATGCAAAAGCCGACCCTGAAGGGTCGGCTCGGGGCCAGC‑AACCAATCACTTGATCAGGCTGAg                                             >  2:75861/1‑148 (MQ=255)                                                                                                                  cTGATCCAGTCACCGAAGACGATGAGCTGGCCGAGGCCAACCCGCAGGGCTTTGACGATCATGGGCAACTCCTGAAATGCAAAAGCCGACCCTGAAGGGTCGGCTCGGGGCCAGC‑AACCAATCACTTGATCAGGCTGAGGAACTCGCTg                                   <  4:263613/149‑1 (MQ=255)                                                                                                                  cTGATCCAGTCACCGAAGACGATGAGCTGGCCGAGGCCAACCCGCAGGGCTTTGACGATCATGGGCAACTCCTGAAATGCAAAAGCCGACCCTGAAGGGTCGGCTCGGGGCCAGC‑AACCAATCACTTGATCAGGCTGAGGAACTCGCTg                                   <  8:5250/149‑1 (MQ=255)                                                                                                                             aCCGAAGACGATGAGCTGGCCGAGGCCAACCCGCAGGGCTTTGACGATCATGGGCAACTCCTGAAATGCAAAAGCCGACCCTGAAGGGTCGGCTCGGGGCCAGC‑AACCAATCACTTGATCAGGCTGAGGAACTCGCTGCGGGTggcggc                        >  2:55838/1‑149 (MQ=255)                                                                                                                                  aGACGATGAGCGGCCCGAGGCCAACCCGCAGGGCTTTGACGATCATGGGCAACTCCAGAAATGCAAAAGCCGACCCTGAAGGGTCGGCTCGGGGCCAGC‑AACCAATCACTTGATCAGGCTGAGGAACTCGCTGCGGGTGGCGGCGTTGt                   <  4:172466/149‑1 (MQ=255)                                                                                                                                   gACGATGAGCTGCCCGAGGCCAACCCGCAGGGCTTTGACGATCATTGGCAACTCCTGAAATGCAAAAGCCGACCCTGAAGGGTCGGCTCGGGGCCAGCAAACCAATCACTTGATCAGGCTGAGGAACTCGCTGCGGGTGGCGGCGTTGt                   <  1:75861/149‑1 (MQ=255)                                                                                                                                     cGATGAGCTGGCCGAGGCCAACCCGCAGGGCTTTGACGATCATGGGCAACTCCTGAAATGCAAAAGCCGACCCTGAAGGGTCGGCTCGGGGCCAGC‑AACCAATCACTTGATCAGGCTGAGGAACTCGCTGCGGGTGGCGGCGTTGTcgc                >  3:44339/1‑149 (MQ=255)                                                                                                                                      gATGAGCTGGCCGAGGCCAACCCGCAGGGCTTTGACGATCATGGGCAACTCCTGAAATGCAAAAGCCGACCCTGAAGGGTCGGCTCGGGGCCAGC‑AACCAATCACTTGATCAGGCTGAGGAACTCGCTGCGGGTg                             >  3:114208/1‑135 (MQ=255)                                                                                                                                      gATGAGCTGGCCGAGGCCAACCCGCAGGGCTTTGACGATCATGGGCAACTCCTGAAATGCAAAAGCCGACCCTGAAGGGTCGGCTCGGGGCCAGC‑AACCAATCACTTGATCAGGCTGAGGAACTCGCTGCGGGTg                             <  4:114208/135‑1 (MQ=255)                                                                                                                                      gATGAGCTGGCCGAGGCCAACCCGCAGGGCTTTGACGATCATGGGCAACTCCTGAAATGCAAAAGCCGACCCTGAAGGGTCGGCTCGGGGCCAGC‑AACCAATCACTTGATCAGGCTGAGGAACTCGCTGCGGGTGGCGGCGTTGTcgcg               >  2:160360/1‑149 (MQ=255)                                                                                                                                      gATGAGCGGGCCGAGGCCAACCCGCAGGGCTTTGACGATCATGGGCAACTCCTGAAATGCAAAAGCCGACCCTGACGGGTCGGCTCGGGGCCAGC‑AACCAATCACTTGATCAGGCTGAGGAACTCGCTGCGGGTGGCGGCGTTGTcgcg               <  7:54349/149‑1 (MQ=255)                                                                                                                                            cTGGCCGAGGCCAACCCGCAGGGCTTTGACGATCATGGGCAACTCCTGAAATGCAAAAGCCGACCCTGAAGGGTCGGCTCGGGGCCAGC‑AACCAATCACTTGATCAGGCTGAGGAACTCGCTGCGGGTGGCGGCGTTGTCGCGGAACt          >  6:143593/1‑148 (MQ=255)                                                                                                                                               gCCGAGGCCAACCCGCAGGGCTTTGACGATCATGGGCAACTCCTGAAATGCAAAAGCCGACCCTGAAGGGTCGGCTCGGGGCCAGC‑AACCAATCACTTGATCAGGCTGAGGAACTCGCTGCGGGTGGCGGCGTTGTCGCGGAACTCAcc      <  6:114735/149‑1 (MQ=255)                                                                                                                                                ccGAGGCCAACCCGCAGGGCTTTGACGATCATGGGCAACTCCTGAAATGCAAAAGCCGACCCTGAAGGGTCGGCTCGGGGCCAGC‑AACCAATCACTTGATCAGGCTGAGGAACTCGCTGCGGGTGGCGGCGTTGTCGCGGAACTCAccc     <  3:72141/149‑1 (MQ=255)                                                                                                                                                   aGGCCAACCCGCAGGGCTTTGACGATCATGGGCAACTCCTGAAATGCAAAAGCCGACCCTGAAGGGTCGGCTCGGGGCCAGC‑AACCAATCACTTGATCAGGCTGAGGAACTCGCTGCGGGTGGCGGCGTTGTCGCGGAACTCACCCAGc  <  1:160360/149‑1 (MQ=255)                                                                                                                                                   aGGCCAACCCGCAGGGCTTTGACGATCATGGGCAACTCCTGAAATGCAAAAGCCGACCCTGAAGGGGCGGCTCGGGGCCAGC‑AACCAATCACTTGATCAGGCTGAGGAACTCGCTGCGGGTGGCGGCGTTGTCGCGGAACTCACCCAGc  <  5:331737/149‑1 (MQ=255)                                                                                                                                                   |                                                                                                                                                      GGCGGGTTTTGACACAGAACGGGCAGGCGTGGAACTGGTACAGCGCCAGCCCCTTGGCCGCTTGCTCGATGCGGGCCTGGGCGGCGGCGTCGCGTTTGCGCTTGGCCGGGCGGCTGATCCAGTCACCGAAGACGATGAGCTGGCCGAGGCCAACCCGCAGGGCTTTGACGATCATGGGCAACTCCTGAAATGCAAAAGCCGACCCTGAAGGGTCGGCTCGGGGCCAGC‑AACCAATCACTTGATCAGGCTGAGGAACTCGCTGCGGGTGGCGGCGTTGTCGCGGAACTCACCCAGC  >  NC_002947/2049097‑2049391

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.