New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 2234201 = | 55 (1.060) | 3 (0.060) | 3/254 | NT | 6.0% | coding (405/1197 nt) | tyrB | aromatic amino acid aminotransferase |
? | NC_002947 | 2234237 = | 42 (0.850) | coding (369/1197 nt) | tyrB | aromatic amino acid aminotransferase |
TGGCAGGGCGTTGAGGTCTTCGAGCATGCCAGCGCGGTTGACGTCGTTGGTCGGCGCATCGTAGTAGCGGTAGGTCTGCACCGGGAAGCCGGCCGATTCGAACAGCGCACGGTGGTTTTCCCAGCTAGGGTCGCTGATGGCAACCACGGCATTGGGCGAGAGGCGCTTGAGGAAGTCGGCACCGATCTTCAGCGCGCCGGTACCACCGACGGCCTGCACGGTGACCACGCGGCCGGCGGCCAGCAGTGGCGACTCGGCGCCGAACAGCAGCTTCTGCACAGCCTGGTCGTAGGTGG > NC_002947/2234090‑2234385 | gccgagtcgccactgctggccgccggccgcgtggtcaccgtgcaggccgtcggtggtaccggcgcgctgaagatcggtgccgacttcctcaagcgcctctcgcccaatgccGTGGTTTTCCCAGCTAGGGTCGCTGATGGCAACCACgg > 4:102304‑M1/112‑149 (MQ=255) gagtcgccactgctggccgccggccgcgtggtcaccgtgcaggccgtcggtggtaccggcgcgctgaagatcggtgccgacttgctcaagcgcctctcgcccaatgccGTGGTTTTCCCAGCTAGGGTCGCTGATGGCAACCACGGc < 5:39183‑M1/39‑1 (MQ=255) gagtcgccactgctggccgccggccgcgtggtcaccgtgcaggccgtcggtggtaccggcgcgctgaagatcggtgccgacttcctcaagcgcctctcgcccaatgccGTGGTTTTCCCAGCTAGGGTCGCTGATGGCAACCACGGc > 6:39183‑M1/109‑147 (MQ=255) aGGGCGTTGAGGTCTTCGAGCATGCCAGCGCGGTTGACGTCGTTGGTCGGCGCATCGTAGTAGCGGTAGGTCTGCACCGGGAAGCCGGCCGATTCGAACAGCGCACGGTGGTTTTCCCAGCTTGGGTCGCTGATGGCAACCACGGCAtt > 1:46591/1‑149 (MQ=255) gCGTTGAGGTCTTCGAGCATGCCAGCGCGGTTGACGTCGTTGGTCGGCGCATCGTAGTAGCGGTAGGTCTGCACCGGGAAGCCGGCCGATTCGAACAGCGCACGGTGGTTTTCCCAGCTAGGGTCGCTGATGGCAACCACGGCATTggc < 4:293187/149‑2 (MQ=255) gTTGAGGTCTTCGAGCATGCCAGCGCGGTTGACGTCGTTGGTCGGCGCATCGTAGTAGCGGTAGGTCTGCACCGGGAAGCCGGCCGATTCGAACAGCGCACGGTGGTTTTCCCAGCTAGGGTCGCTGATGGCAACCACGGCATTGGGc > 6:143046/1‑148 (MQ=255) ttCGAGGTTGCCTGCGCGGTTGACGTCGTTGGTCGGCGCATCGTAGTAGGTGTAGGTCTGCAGCGGGTAGCGGGCCGATTCGAACAGCGGTCGGTGGTTTTCCCAGCTTGGGTCGCTGATGGCATCCACGGCATTGGGCgaga < 4:47928/143‑1 (MQ=255) ttCGAGCATGCCAGCGCGGTTGACCTCGTTCGTCGGCGCATCGTAGTAGCGGTAGGTCTGCACCGGGAAGCCGGCCGATTCGAACAGCGCACGGTGGATTTCCCAGCTACGGTCGCTGATGGCAACCACGGCATTGGGCgaga > 3:47928/1‑143 (MQ=255) cGAGCATGCCAGCGCGGTTGACGTCGTTGGTCGGCGCATCGTAGTAGCGGTAGGTCTGCACCGGGAAGCCGGCCGATTCGAACAGCGCACGGTGGTTTTCCCAGCTAGGGTCGCTGATGGCAACCACGGCATTGGGCGAGAGgcgc < 3:209386/146‑1 (MQ=255) cGAGCATGCCAGCGCGGTTGACGTCGTTGGTCGGCGCATCGTAGTAGCGGTAGGTCTGCACCGGGAAGCCGGCCGATTCGAACAGCGCACGGTGGTTTTCCCAGCTAGGGTCGCTGATGGCAACCACGGCATTGGGCGAGAGGCGCtt > 3:319262/1‑148 (MQ=255) gAGCATGCCAGCGCGGTTGACGTCGTTGGTCGGCGCATCGTAGTAGCGGTAGGTCTGCACCGGGAAGCCGGCCGATTCGAACAGCGCACGGTGGTTTTCCCAGCTAGGGTCGCTGATGGCAACCACGGCATTGGGCGAGAGGCGCtt > 5:239492/1‑147 (MQ=255) gAGCATGCCAGCGCGGTTGACGTCGTTGGTCGGCGCATCGTAGTAGCGGTAGGTCTGCACCGGGAAGCCGGCCGATTCGAACAGCGCACGGTGGTTTTCCCAGCTAGGGTCGCTGATGGCAACCACGGCATTGGGCGAGAGGCGCTTGa < 8:32139/149‑1 (MQ=255) gAGCATGCCAGCGCGGTTGACGTCGTTGGTCGGCGCATCGTAGTAGCGGTAGGTCTGCACCGGGAAGCCGGCCGATTCGAACAGCGCACGGTGGTTTTCCCAGCTAGGGTCGCTGATGGCAACCACGGCATTGGGCGAGAGGCGCTTGa < 7:17943/149‑1 (MQ=255) aGCATGCCAGCGCGGTTGACGTCGTTGGTCGGCGCATCGTAGTAGCGGTAGGTCTGCACCGGGAAGCCGGCCGATTCGAACAGCGCACGGTGGTTTTCCCAGCTAGGGTCGCTGATGGCAACCACGGCATTGGGCGAGAGGCGCTTGAg < 7:30356/149‑1 (MQ=255) aGCATGCCAGCGCGGTTGACGTCGTTGGTCGGCGCATCGTAGTAGCGGTAGGTCTGCACCGGGAAGCCGGCCGATTCGAACAGCGCACGGTGGTTTTCCCAGCTAGGGTCGCTGATGGCAACCACGGCATTGGGCGAGAGGCGCTTGAg < 3:56365/149‑1 (MQ=255) ccAGCGCGGTTGACGTCGTTGGTCGGCGCATCGTAGTAGCGGTAGGTCTGCACCGGGAAGCCGGCCGATTCGAACAGCGCACGGTGGTTTTCCCAGCTAGGGTCGCTGATGGCAACCACGGCATTGGGCGAGAGGCGCTTGAGGAAGTc < 5:115570/149‑1 (MQ=255) ccAGCGCGGTTGACGTCGTTGGTCGGCGCATCGTAGTAGCGGTAGGTCTGCACCGGGAAGCCGGCCGATTCGAACAGCGCACGGTGGTTTTCCCAGCTAGGGTCGCTGATGGCAACCACGGCATTGGGCGAGAGGCGCTTGAGGAAGTc < 5:83574/149‑1 (MQ=255) gcgGTTGACGTCGTTGGTCGGCGCATCGTAGTAGCGGTAGGTCTGCACCGGGAAGCCGGCCGATTCGAACAGCGCACGGTGGTTTTCCCAGCTTGGGTCGCTGATGGCAACCACGGCATTGGGCGAGAGGCGCTTGAGGAAGTCGGCAc < 2:46591/149‑1 (MQ=255) cgtcgtTGGTCGGCGCATCGTAGTAGCGGTAGGTCTGCACCGGGAAGCCGGCCGATTCGAACAGCGCACGGTGGTTTTCCCAGCTAGGGTCGCTGATGGCACCCACGGCATTGGGCGAGAGGCGCTTGAGGAAGTCGGCACCGATCtt > 8:230799/1‑148 (MQ=255) tcgtTGGTCGGCGCATCGTAGTAGCGGTAGGTCTGCACCGGGAAGCCGGCCGATTCGAACAGCGCACGGTGGTTTTCCCAGCTAGGGTCGCTGATTGCAACCACGGCATTGGGCGAGAGGCGCTTGAGGAAGTCGGCACCGATCTTCAg < 5:225327/149‑1 (MQ=255) tCGGCGCATCGTAGTAGCGGTAGGTCTGCACCGGGAAGCCGGCCGATTCGAACAGCGCACGGTGGTTTTCCCAGCTAGGGTCGCTGATGGCAACCACGGCATTGGGCGAGAGGCGCTTGAGGAAGTCGGCACCGATCTTCAGCGCGCCg > 7:233970/1‑149 (MQ=255) ggCGCATCGTAGTAGCGGTAGGTCTGCACCGGGAAGCCGGCCGATTCGAACAGCGCACGGTGGTTTTCCCAGCTAGGGTCGCTGATGGCAACCACGGCATTGGGCGAGAGGCGCTTGAGGAAGTCGGCACCGATCTTCAGCGCGCCgg > 6:130644/1‑148 (MQ=255) cgcATCGTAGTAGCGGTAGGTCTGCACCGGGAAGCCGGCCGATTCGAACAGCGCACGGTGGTTTTCCCAGCTAGGGTCGCTGATGGCAACCACGGCATTGGGCGAGAGGCGCTTGAGGAAGTCGGCACCGATCTTCAGCGCGCCGGTac < 8:7630/149‑1 (MQ=255) gTAGGTCTGCACCGGGAAGCCGGCCGATTCGAACAGCGCACGGTGGTTTTCCCAGCTAGGGTCGCTGATGGCAACCACGGCATTGGGCGAGAGGCGCTTGAGGAAGTCGGCACCGATCTTCAgcgcgc > 1:315397/1‑128 (MQ=255) gTAGGTCTGCACCGGGAAGCCGGCCGATTCGAACAGCGCACGGTGGTTTTCCCAGCTAGGGTCGCTGATGGCAACCACGGCATTGGGCGAGAGGCGCTTGAGGAAGTCGGCACCGATCTTCAgcgcgc < 2:315397/128‑1 (MQ=255) gTCTGCACCGGGAAGCCGGCCGATTCGAACAGCGCACGGTGGTTTTCCCAGCTAGGGTCGCTGATGGCAACCACGGCATTGGGCGAGAGGCGCTTGAGGAAGTCGGCACCGATCTTCAGCGCGCCGGTACCACCGACGGCCTGCACGGt > 2:42211/1‑149 (MQ=255) gTCTGCACCGGGAAGCCGGCCGATTCGAACAGCGCACGGTGGTTTTCCCAGCTAGGGTCGCTGATGGCAACCACGGCATTGGGCGAGAGGCGCTTGAGGAAGTCGGCACCGATCTTCAGCGCGCCGGTACCACCGACGGCCTGCACGGt < 5:237583/149‑1 (MQ=255) cTGCACCGGGAAGCCGGCCGATTCGAACAGCGCACGGTGGTTTTCCCAGCTAGGGTCGCTGATGGCAACCACGGCATTGGGCGAGAGGCGCTTGAGGAAGTCGGCCCCGATCTTCAGCGCGCCGGTACCACCGACGGCCTGCACGGTGa > 6:18458/1‑149 (MQ=255) tGCACCGGGAAGCCGGCCGATTCGAACAGCGCACGGTGGTTTTCCCAGCTAGGGTCGCTGATGGCAACCACGGCATTGGGCGAGAGGCGCTTGAGGAAGTCGGCACCGATCTTCAGCGCGCCGGTACCACCGACGGCCTGCACGGTGAc > 1:62123/1‑149 (MQ=255) cACCGGGAAGCCGGCCGATTCGAACAGCGCACGGTGGTTTTCCCAGCTAGGGTCGCTGATGGCAACCACGGCATTGGGCGAGAGGCGCTTGAGGAAGTCGGCACCGATCTTCAGCGCGCCGGTACCACCGACGGCCTGCACGGTGACCa > 3:219271/1‑149 (MQ=255) cGGGAAGCCGGCCGATTCGAACAGCGCACGGTGGTTTTCCCAGCTAGGGTCGCTGATGGCAACCACGGCATTGGGCGAGAGGCGCTTGAGGAAGTCGGCACCGATCTTCAGCGCGCCGGTACCACCGACGGCCTGCACGGt > 4:155915/1‑141 (MQ=255) cGGGAAGCCGGCCGATTCGAACAGCGCACGGTGGTTTTCCCAGCTAGGGTCGCTGATGGCAACCACGGCATTGGGCGAGAGGCGCTTGAGGAAGTCGGCACCGATCTTCAGCGCGCCGGTACCACCGACGGCCTGCACGGt < 3:155915/141‑1 (MQ=255) gccgATTCGAACAGCGCACGGTGGTTTTCCAAGCTAGGGTCGCTGATCTAAACCACGGAATTGGGCGAGAGGAGCTTGAGGAAGTCGGAACCGATCTTCAGCGCGCCGGTACCACCGACGGCCTGCAACGTGACCACGcggccggagca > 4:295390/1‑145 (MQ=255) gAACAGCGCACGGTGGTTTTCCCAGCCAGGGTCGCTGATGGCAACCACGGCATTGGGCGAGAGGCGCTTGAGGAAGTCGGCACCGATCTTCAGCGCGCCGGTACCACCGACGGCCTGCACGGTGCCCACGCGGCCGGCGGCCAGCAGTg > 6:88335/1‑149 (MQ=255) aaCAGCGCACGGTGGTTTTCCCAGCTAGGGTCGCTGATGGCAACCACGGCATTGGGCGAGAGGCGCTTGAGGAAGTCGGCACCGATCTTCAGCGCGCCGGTACCACCGACGGCCTGCACGGTGACCACGcgg < 5:128754/132‑1 (MQ=255) aaCAGCGCACGGTGGTTTTCCCAGCTAGGGTCGCTGATGGCAACCACGGCATTGGGCGAGAGGCGCTTGAGGAAGTCGGCACCGATCTTCAGCGCGCCGGTACCACCGACGGCCTGCACGGTGACCACGcgg > 6:128754/1‑132 (MQ=255) aaCAGCGCACGGTGGTTTTCCCAGCTAGGGTCGCTGATGGCAACCACGGCATTGGGCGAGAGGCGCTTGAGGAAGTCGGCACCGATCTTCAGCGCGCCGGTACCACCGACGGCCTGCACGGTGACCACGcgg > 2:75421/1‑132 (MQ=255) aaCAGCGCACGGTGGTTTTCCCAGCTAGGGTCGCTGATGGCAACCACGGCATTGGGCGAGAGGCGCTTGAGGAAGTCGGCACCGATCTTCAGCGCGCCGGTACCACCGACGGCCTGCACGGTGACCACGcgg < 1:75421/132‑1 (MQ=255) aaCAGCGCACGGTGGTTTTCCCAGCTAGGGTCGCTGATGGCAACCACGGCATTGGGCGAGAGGCGCTTGAGGAAGTCGGCACCGATCTTCAGCGCGCCGGTACCACCGACGGCCTGCACGGTGACCACGCGGCCGGCGGCCAGCAGTgg < 5:143046/149‑1 (MQ=255) aaCAGCGCACGGTGGTTTTCCCAGCTAGGGTCGCTGATGGCAACCACGGCATTGGGCGAGAGGCGCTTGAGGAAGTCGGCACCGATCTTCAGCGCGCCGGTACCACCGACGGCCTGCACGGTGACCACGCGGCCGGCGGCCAGCAGTgg > 2:58106/1‑149 (MQ=255) gccgtggttgccatcagcgaccctagctgggaaaaccacGGCATTGGGCGAGAGGCGCTTGAGGAAGTCGGCACCGATCTTCAGCGCGCCGGTACCACCGACGGCCTGCACGGTGACCACGCGGCCGGCGGCCAGCAGTGGCGACTc > 6:39183‑M2/40‑147 (MQ=255) gccgtggttgccatcagcgaccctagctgggaaaaccacGGCATTGGGCGAGAGGCGCTTGAGCAAGTCGGCACCGATCTTCAGCGCGCCGGTACCACCGACGGCCTGCACGGTGACCACGCGGCCGGCGGCCAGCAGTGGCGACTc < 5:39183‑M2/108‑1 (MQ=255) aCGGTGGTTTTCCCAGCTAGGGTCGCTGATGGCAACCACGGCATTGGGCGAGAGGCGCTTGAGGAAGTCGGCACCGATCTTCAGCGCGCCGGTACCACCGACGGCCTGCACGGTGACCACGCGGCCGGCGGCCAGCAGTGGCGACTCgg > 6:36294/1‑149 (MQ=255) ccgtggttgccatcagcgaccctagctgggaaaaccacGGCATTGGGCGAGAGGCGCTTGAGGAAGTCGGCACCGATCTTCAGCGCGCCGGTACCACCGACGGCCTGCACGGTGACCACGCGGCCGGCGGCCAGCAGTGGCGACTCGgc > 4:102304‑M2/39‑149 (MQ=255) TGGTTTTCCCAGCTAGGGTCGCTGATGGCAACCACGGCATTGGGCGAGAGGCGCTTGAGGAAGTCGGCACCGATCTTCAGCGCGCCGGTACCACCGACGGCCTGCACGGTGACCACGCGGCCGGCGGCCAGCAGTGGCGACTCGGCGcc < 6:155231‑M1/149‑1 (MQ=255) GTTTTCCCAGCTAGGGTCGCTGATGGCAACCACGGCATTGGGCGAGAGGCGCTTGAGGAAGTCGGCACCGATCTTCAGCGCGCCGGTACCACCGACGGCCTGCACGGTGACCACGCGGCCGGCGGCCAGCAGTGGCGACTCGGCGCCg > 4:219271‑M1/1‑148 (MQ=255) tCCCAGCTAGGGTCGCTGATGGCAACCACGGCATTGGGCGAGAGGCGCTTGAGGAAGTCGGCACCGATCTTCAGCGCGCCGGTACCACCGACGGCCTGCACGGTGACCACGCGGCCGGCGGCCAGCAGTGGCGACTCGGCGCCGAAca < 4:309802/148‑1 (MQ=255) ccAGCTAGGGTCGCTGATGGCAACCACGGCATTGGGCGAGAGGCGCTTGAGGAAGTCGGCACCGATCTTCAGCGCGCCGGTACCACCGACGGCCTGCACGGTGACCACGCGGCCGGCGGCCAGCAGTGGCGACTCGGCGCCGAAcagc < 6:239492/148‑1 (MQ=255) cAGCTAGGGTCGCTGATGGCAACCACGGCATTGGGCGAGAGGCGCTTGAGGAAGTCGGCACCGATCTTCAGCGCGCCGGTACCACCGACGGCCTGCACGGTGACCACGCGGCCGGCGGCCAGCAGTGGCGACTCGGCGCCGAAcagcag > 5:164385/1‑149 (MQ=255) aGCTAGGGTCGCTGATGGCAACCACGGCATTGGGCGAGAGGCGCTTGAGGAAGTCGGCACCGATCTTCAGCGCGCCGGTACCACCGACGGCCTGCACGGTGACCACGCGGCCGGCGGCCAGCAGTGGCGACTCGGCGCCGAACagcagc > 5:251948/1‑149 (MQ=255) tGGCAACCACGTCATTGTGCGAGAGGCGCTTGAGGAAGTCGGCACCGATCTTCAGCGCGCCGGTACCACCGACGGCCTGCACGGTGACCACGCGGCCGGCGGCCAGCAGTGGCGACTCGGCGCCGAACAGCATCTTCTGCACAGCCTg < 3:295390/148‑1 (MQ=255) cAACCACGGCATTGGGCGAGAGGCGCTTGAGGAAGTCGGCACCGATCTTCAGCGCGCCGGTACCACCGACAGCCTGCACGGTGACCACGCGGCCGGCGGCCAGCAGTGGCGACTCGGCGCCGAACAGCAGCTTCTGcaca < 5:222423/140‑1 (MQ=255) cAACCACGGCATTGGGCGAGAGGCGCTTGAGGAAGTCGGCACCGATCTTCAGCGCGCCGGTACCACCGACAGCCTGCACGGTGACCACGCGGCCGGCGGCCAGCAGTGGCGACTCGGCGCCGAACAGCAGCTTCTGcaca > 6:222423/1‑140 (MQ=255) aaccacGGCATTGGGCGAGAGGCGCATGAGGAAGTCGGCACCGATCTTCAGCGCGCCGGTACCACCGACGGCCTGCACGGTGACCACGCGGCCGGCGGCCAGCAGTGGCGACTCGGCGCCGAACAGCAGCTTCTCCACAGCCTGGTCg > 5:9437‑M2/7‑148 (MQ=255) cacGGCATTGGGCGAGAGGCGCTTGAGGAAGTCGGCACCGATCTTCAGCGCGCCGGTACCACCGACGGCCTGCACGGTGACCACGCGGCCGGCGGCCAGCAGTGGCGACTCGGCGCCGAACAGCAGCTTCTGCACAGCCTGGTCGTAgg > 6:18373‑M2/4‑149 (MQ=255) cacGGCATTGGGCGAGAGGCGCTTGAGGAAGTCGGCACCGATCTTCAGCGCGCCGGTACCACCGACGGCCTGCACGGTGACCACGCGGCCGGCGGCCAGCAGTGGCGACTCGGCGCCGAACAGCAGCTTCTGCACAGCCTGGTCGTAgg > 6:162755‑M2/4‑149 (MQ=255) aCGGCATTGGGCGAGAGTCTCTTGAGGATGTCGGCACCGATCTTCAGCGCGCGGGTACCTCCGACGGACTGCACTGTGACCACGCGGCCGGCGGCGAGCAGTGGCGAGTCGGCGCCGAACAGCTGCTTCTGCACAGGCTGGTCGTAGGt < 6:9437/149‑1 (MQ=255) ggCATTGGGCGAGAGGCGCTTGAGGAAGTCGGCACCGATCTTCAGCGCGCCGGTACCACCGACGGCCTGCACGGTGACCACGCGGCCGGCGGCCAGCAGTGGCGACTCGGCGCCGAACAGCAGCTTCTGCACAGCCTGGTCGTAGGTgg < 6:164385/149‑1 (MQ=255) ggCATTGGGCGAGAGGCGCTTGAGGAAGTCGGCACCGATCTTCAGCGCGCCGGTACCACCGACGGCCTGCACGGTGACCACGCGGCCGGCGGCCAGCAGTGGCGACTCGGCGCCGAACAGCAGCTTCTGCACAGCCTGGTCGTAGGTgg < 5:162755/149‑1 (MQ=255) ggCATTGGGCGAGAGGCGCTTGAGGAAGTCGGCACCGATCTTCAGCGCGCCGGTACCACCGACGGCCTGCACGGTGACCACGCGGCCGGCGGCCAGCAGTGGCGACTCGGCGCCGAACAGCAGCTTCTGCACAGCCTGGTCGTAGGTgg > 1:318947/1‑149 (MQ=255) | TGGCAGGGCGTTGAGGTCTTCGAGCATGCCAGCGCGGTTGACGTCGTTGGTCGGCGCATCGTAGTAGCGGTAGGTCTGCACCGGGAAGCCGGCCGATTCGAACAGCGCACGGTGGTTTTCCCAGCTAGGGTCGCTGATGGCAACCACGGCATTGGGCGAGAGGCGCTTGAGGAAGTCGGCACCGATCTTCAGCGCGCCGGTACCACCGACGGCCTGCACGGTGACCACGCGGCCGGCGGCCAGCAGTGGCGACTCGGCGCCGAACAGCAGCTTCTGCACAGCCTGGTCGTAGGTGG > NC_002947/2234090‑2234385 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |