New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2310524 =	46 (0.880)	4 (0.080)	4/246	NT	8.6%	coding (275/1311 nt)	PP_2033	hypothetical protein
	?	NC_002947	2310581 =	42 (0.870)					coding (332/1311 nt)	PP_2033	hypothetical protein

GCTGATGCTGCCGGTGCCGACGGGCCGCAGGCGTTCTTGAAGCGCTATGTGGAAGGCGTGGGCACGCTGGCGGGTGAAGCCGACCATGTCTACGCCTCGGCCACCGGGCATGGGCGCACAGGGGCAGAGGCCCGGGTTGCCGAGGCGTTGCAGGGAATGGCCGAGCAACTGCGGGCATGGCGCCAGGCGCA‑TCCGCAGGCGACGCTGGAAGGGGTCGAGTTCGATCTTTTCGGTTTCAGCCGCGGC‑GCGGCAGCGGTGCGGCATCTGGCCAACCTGCTGCACGATGGCGCGGGCGG  >  NC_002947/2310433‑2310728                                                                                                                                                     |                                                                                                                                                      gCTGGTGCTGCCGGTGCCGACGGGCCGCAGGCGTTCTTGAAGCGCTATGTGGAAGGCGTGGGCACGCTGGCGGGTGAAGCCGACCATGTCTACGCCTCGGCCACCGGGCATGGGCGCACAGGGGCAGAGGCCCGGGTTGCCGAGGCGtt                                                                                                                                                       >  3:271592/1‑149 (MQ=255)     aTGCTGCCGGTGCCGACGGGCCGCAGGCGTTCTTGAAGCGCTATGTGGAAGGCGTGGGCACGCTGGCGGGTGAAGCCGACCATGTCTACGCCTCGGCCACCGGGCATGGGCGCACAGGGGCAGAGGCCCGGGTTGCCGAGGCGTTGCAg                                                                                                                                                   <  1:249496/149‑1 (MQ=255)          gcCGGTGCCGACGGGCCGCAGGCGTTCTTGAAGCGCTATGTGGAAGGCGTGGGCACGCTGGCGGGTGAAGCCGACCATGTCTACGCCTCGGCCACCGGGCATGGGCGCACAGGGGCAGAGGCCCGGGTTGCCGAGGCGTTGCAGGGAAt                                                                                                                                              >  5:128708/1‑149 (MQ=255)            cGGTGCCGACGGGCCGCAGGCGTTCTTGAAGCGCTATGTGGAAGGCGTGGGCACGCTGGCGGGTGAAGCCGACCATGTCTACGCCTCGGCCACCGGGCATGGGCGCACAGGGGCAGAGGCCCGGGTTGCCGAGGCGTTGCAGGGAATgg                                                                                                                                            <  2:298542/149‑1 (MQ=255)                  cGACGGGCCGCAGGCGTTCTTGAAGCGCTATGTGGAAGGCGTGGGCACGCTGGCGGGTGAAGCCGACCATGTCTACGCCTCGGCCACCGGGCATGGGCGCACAGGGGCAGAGGCCCGGGTTGCCGAGGCGTTGCAGGGAATGGCCGAg                                                                                                                                       >  7:144322/1‑148 (MQ=255)                    aCGGGCCGCAGGCGTTCTTGAAGCGCTATGTGGAAGGCGTGGGCACGCTGGCGGGTGAAGCCGACCATGTCTACGCCTCGGCCACCGGGCATGGGCGCACAGGGGCAGAGGCCCGGGTTGCCGAGGCGTTGCAGGGAATGGCCGAGCaa                                                                                                                                    <  8:97860/149‑1 (MQ=255)                          cGCAGGCGTTCTTGAAGCGCTATGTGGAAGGCGTGGGCACGCTGGCGGGTGAAGCCGACCATGTCTACGCCTCGGCCACCGGGCATGGGCGCACAGGGGCAGAGGCCCGGGTTGCCGAGGCGTTGCAGGGAATGGCCGAGCAACTGCgg                                                                                                                              <  6:290792/149‑1 (MQ=255)                           gCAGGCGTTCTTGAAGCGCTATGTGGAAGGCGTGGGCACGCTGGCGGGTGAAGCCGACCATGTCTACGCCTCGGCCACCGGGCATGGGCGCACAGGGGCAGAGGCCCGGGTTGCCGAGGCGTTGCAGGGAATGGCCGAGCGACTGCggg                                                                                                                             >  3:228351/1‑149 (MQ=255)                               gCGTTCTTGAAGCGCTATGTGGAAGGCGTGGGCACGCTGGCGGGTGAAGCCGTCCATGTCTACGCCTCGGCCACCGGGCATGGGCGCACAGGGGCAGAGGCCCGGGTTGCCGAGGCGTTGCAGGGAATGGCCGAGCAACTGCGGGCAt                                                                                                                          <  2:180570/148‑1 (MQ=255)                               gCGTTCTTGAAGCGCTATGTGGAAGGCGTGGGCACGCTGGCGGGTGAAGCCGACCATGTCTACGCCTCGGCCACCGGGCATGGGCGCACAGGGGCAGAGGCCCGGGTTGCCGAGGCGTTGCAGGGAATGGCCGAGCAACTGCGGGCAt                                                                                                                          >  1:180570/1‑148 (MQ=255)                               gCGTTCTTGAAGCGCTATGTGGAAGGCGTGGGCACGCTGGCGGGTGAAGCCGACCATGTCTACGCCTCGGCCACCGGGCATGGGCGCACAGGGGCAGAGGCCCGGGTTGCCGAGGCGTTGCAGGGAATGGCCGAGCAACTGCGGGCATg                                                                                                                         >  1:133549/1‑149 (MQ=255)                               gCGTTCTTGAAGCGCTATGTGGAAGGCGTGGGCACGCTGGCGGGTGAAGCCGACCATGTCTACGCCTCGGCCACCGGGCATGGGCGCACAGGGGCAGAGGCCCGGGTTGCCGAGGCGTTGCAGGGAATGGCCGAGCAACTGCGGGCATg                                                                                                                         <  1:247223/149‑1 (MQ=255)                                cGTTCTTGAAGCGCTATGTGGAAGGCGTGGGCACGCTGGCGGGTGAAGCCGACCATGTCTACGCCTCGGCCACCGGGCATGGGCGCACAGGGGCAGAGGCCCGGGTTGCCGAGGCGTTGCAGGGAATGGCCGAGCAACTGCGGGCATgg                                                                                                                        >  7:107180/1‑149 (MQ=255)                                         aGCGCTATGTGGAAGGCGTGGGCACGCTGGCGGGTGAAGCCGACCATGTCTACGCCTCGGCCACCGGGCATGGGCGCACAGGGGCAGAGGCCCGGGTTGCCGAGGCGTTGCAGGGAATGGCCGAGCAACTGCGGGCATGGCGCCAGgc                                                                                                                <  4:271592/148‑1 (MQ=255)                                             cTATGTGGAAGGCGTGGGCACGCTGGCGGGTGAAGCCGACCATGTCTACGCCTCGGCCACCGGGCATGGGCGCACAGGGGCAGAGGCCCGGGTTGCCGAGGCGTTGCAGGGAATGGCCGAGCAACTGCGGGCATGGCGCCAGGCGCA‑Tc                                                                                                          <  8:144322/149‑1 (MQ=255)                                                   ggAAGGCGTGGGCACGCTGGCGGGTGAAGCCGACCATGTCTACGCCTCGGCCACCGGGCATGGGCGCACAGGGGCAGAGGCCCGGGTTGCCGAGGCGTTGCAGGGAATGGCCGAGCAACTGCGGGCATGGCGCCAGGCGCA‑TCCGCAgg                                                                                                    >  2:238804/1‑149 (MQ=255)                                                   ggAAGGCGTGGGCACGCTGGCGGGTGAAGCCGACCATGTCTACGCCTCGGCCACCGGGCATGGGCGCACAGGGGCAGAGGCCCGGGTTGCCGAGGCGTTGCAGGGAATGGCCGAGCAACTGCGGGCATGGCGCCAGGCGCA‑TCCGCAgg                                                                                                    >  6:215962/1‑149 (MQ=255)                                                    gAAGGCGTGGGCACGCTGGCGGGTGAAGCCGACCATGTCTACGCCTCGGCCACCGGGCATGGGCGCACAGGGGCAGAGGCCCGGGTTGCCGAGGCGTTGCAGGGAATGGCCGAGCAACTGCGGGCATGGCGCCAGGCGCA‑TCCGCAGGc                                                                                                   >  7:109760/1‑149 (MQ=255)                                                           tGGGCACGCTGGCGGGTGAAGCCGACCATGTCTACGCCTCGGCCACCGGGCATGGGCGCACAGGGGCAGAGGCCCGGGTTGCCGAGGCGTTGCAGGGAATGGCCGAGCAACTGCGGGCATGGCGCCAGGCGCA‑TCCGCAGGCGACGCTg                                                                                            <  8:107180/149‑1 (MQ=255)                                                           tGGGCACGCTGGCGGGTGAAGCCGACCATGTCTACGCCTCGGCCACCGGGCATGGGCGCACAGGGGCAGAGGCCCGGGTTGCCGAGGCGTTGCAGGGAATGGCCGAGCAACTGCGGGCATGGCGCCAGGCGCA‑TCCGCAGGCGACGCTg                                                                                            <  3:234987/149‑1 (MQ=255)                                                             ggCACGCTGGCGGGTGAAGCCGACCATGTCTACGCCTCGGCCACCGGGCATGGGCGCACAGGGGCAGAGGCCCGGGTTGCCGAGGCGTTGCAGGGAATGGCCGAGCAACTGCGGGCATGGCGCCAGGCGCA‑TCCGCAGGCGACGCTgg                                                                                           <  4:130643/148‑1 (MQ=255)                                                              gCACGCTGGCGGGTGAAGCCGACCATGTCTACGCCTCGGCCACCGGGCATGGGCGCACAGGGGCAGAGGCCCGGGTTGCCGAGGCGTTGCAGGGAATGGCCGAGCGACTGCGGGCATGGCGCCAGGCGCA‑TCCGCAGGCGACGCTGGaa                                                                                         <  4:228351/149‑1 (MQ=255)                                                              gCACGCTGGCGGGTGAAGCCGACCATGTCTACGCCTCGGCCACCGGGCATGGGCGCACAGGGGCAGAGGCCCGGGTTGCCGAGGCGTTGCAGGGAATGGCCGAGCAACTGCGGGCATGGCGCCAGGCGCA‑TCCGCAGGCGACGCTGGaa                                                                                         <  2:133549/149‑1 (MQ=255)                                                               cACGCTGGCGGGTGAAGCCGACCATGTCTACGCCTCGGCCACCGGGCATGGGCGCACAGGGGCAGAGGCCCGGGTTGCCGAGGCGTTGCAGGGAATGGCCGAGCAACTGCGGGCATGGCGCCAGGCGCA‑TCCGCAGGCGACGCTGGAAg                                                                                        <  4:283553/149‑1 (MQ=255)                                                               cACGCTGGCGGGTGAAGCCGACCATGTCTACGCCTCGGCCACCGGGCATGGGCGCACAGGGGCAGAGGCCCGGGTTGCCGAGGCGTTGCAGGGAATGGCCGAGCAACTGCGGGCATGGCGCCAGGCGCA‑TCCGCAGGCGACGCTGGAAg                                                                                        >  1:179322/1‑149 (MQ=255)                                                                  gCTGGCGGGTGAAGCCGACCATGTCTACGCCTCGGCCACCGGGCATGGGCGCACAGGGGCAGAGGCCCGGGTTGCCGAGGCGTTGCAGGGAATGGCCGAGCAACTGCGGGCATGGCGCCAGGCGCA‑TCCGCAGGCGACGCTGGAAgggg                                                                                     >  8:262073/1‑149 (MQ=255)                                                                    tGGCGGGTGAAGCCGACCATGTCTACGCCTCGGCCACCGGGCATGGGCGCACAGGGGCAGAGGCCCGGGTTGCCGAGGCGTTGCAGGGAATGGCCGAGCAACTGCGGGCATGGCGCCAGGCGCA‑TCCGCAGGCGACGCTGGAAggg                                                                                      <  3:283623/146‑1 (MQ=255)                                                                    tGGCGGGTGAAGCCGACCATGTCTACGCCTCGGCCACCGGGCATGGGCGCACAGGGGCAGAGGCCCGGGTTGCCGAGGCGTTGCAGGGAATGGCCGAGCAACTGCGGGCATGGCGCCAGGCGCA‑TCCGCAGGCGACGCTGGAAggg                                                                                      >  4:283623/1‑146 (MQ=255)                                                                       cGGGTGAAGCCGACCATGTCTACGCCTCGGCCACCGGGCATGGGCGCACAGGGGCAGAGGCCCGGGTTGCCGAGGCGTTGCAGGGAATGGCCGAGCAACTGCGGGCATGGCGCCAGGCGCATTCCGCAGGCGACGCTGGAAGGGGTCGa                                                                                 <  1:169716/149‑1 (MQ=255)                                                                            gAAGCCGACCATGTCTACGCCTCGGCCACCGGGCATGGGCGCACAGGGGCAGAGGCCCGGGTTGCCGAGGCGTTGCAGGGAATGGCCGa                                                                                                                                        <  8:245957/89‑1 (MQ=255)                                                                            gAAGCCGACCATGTCTACGCCTCGGCCACCGGGCATGGGCGCACAGGGGCAGAGGCCCGGGTTGCCGAGGCGTTGCAGGGAATGGCCGa                                                                                                                                        >  7:245957/1‑89 (MQ=255)                                                                              aGCCGACCATGTCTACGCCTCGGCCACCGGGCATGGGCGCACAGGGGCAGAGGCCCGGGTTGCCGAGGCGTTGCAGGGAATGGCCGAGCAACTGCGGGCATGGCGCCAGGCGCA‑TCCGCAGGCGACGCTGGAAGTGGTCGAGTTCGATc                                                                         <  1:238804/149‑1 (MQ=255)                                                                                  gACCATGTCTACGCCTCGGCCACCGGGCATGGGCGCACAGGGGCAGAGGCCCGGGTTGCCGAGGCGTTGCAGGGAATGGCCGAGCAACTGCGGGCATGGCGCCAGGCGCA‑TCCGCAGGCGACGCTGGAAGGGGTCGAGTTCGATCtttt                                                                     <  7:262073/149‑1 (MQ=255)                                                                                   aCCATGTCTACGCCTCGGCCACCGGGCATGGGCGCACAGGGGCAGAGGCCCGGGTTGCCGAGGCGTTGCAGGGAATGGCCGAGCAACTGCGGGCATGGCGCCAGGCGCA‑TCCGCAGGCGACGCTGGAAGGGGTCGAGTTCGATCTTTTc                                                                    >  7:26079/1‑149 (MQ=255)                                                                                    ccATGTCTACGCCTCGGCCACCGGGCATGGGCGCACAGGGGCAGAGGCCCGGGTTGCCGAGGCGTTGCAGGGAATGGCCGAGCAACTGCGGGCATGGCGCCAGGCGCA‑TCCGCAGGCGACGCTGGAAGGGGTCGAGTTCGATCTTTTCg                                                                   <  5:215962/149‑1 (MQ=255)                                                                                           tACGCCTCGGCCACCGGGCATGGGCGCACAGGGGCAGAGGCCCGGGTTGCCGAGGCGTTGCAGGGAATGGCCGAGCAACTGCGGGCATGGCGCCAGGCGCA‑TCCGCAGGCGACGCTGGAAGGGGTCGAGTTCGATCTTTTCGGTTTCAg                                                            >  3:23510/1‑149 (MQ=255)                                                                                            ACGCCTCGGCCACCGGGCATGGGCGCACAGGGGCAGAGGCCCGGGTTGCCGAGGCGTTGCAGGGAATGGCCGAGCAACTGCGGGCATGGCGCCAGGCGCA‑TCCGCAGGCGACGCTGGAAGGGGACGAGTTCGATCTTTTCGGTTTCAGc                                                           <  7:160677‑M1/149‑1 (MQ=255)                                                                                               cctcggcaacccgggcctctgcccctgtgcgcccatgcccggtggccgaggcgtTGCAGGGAATGGCCGAGCAACTGCGGGCATGGCGCCAGGCGCA‑TCCGCAGGCGACGCTGGAAGGGGTCGa                                                                                 >  2:266008‑M2/55‑124 (MQ=255)                                                                                               cctcggcaacccgggcctctgcccctgtccgcccatgcccggtggccgaggcgtTGCAGGGAATGGCCGAGCAACTGCGGGCATGGCGCCAGGCGCA‑TCCGCAGGCGACGCTGGAAGGGGTCGa                                                                                 <  1:266008‑M2/70‑1 (MQ=255)                                                                                                CTCGGCCACCGGGCATGGGCGCACAGGGGCAGAGGCCCGGGTTGCCGAGGCGTTGCAGGGAATGGCCGAGCAACTGCGGGCATGGCGCCAGGCGCA‑TCCGCAGGCGACGCTGGAAGGGGTCGAGTTCGATCTTTTCGGTTTCAGCcgcg                                                       <  4:70855‑M1/149‑1 (MQ=255)                                                                                                CTCGGCCACCGGGCATGGGCGCACAGGGGCAGAGGCCCGGGTTGCCGAGGCGTTGCAGGGAATGGCCGAGCAACTGCGGGCATGGCGCCAGGCGCA‑TCCGCAGGCGACGCTGGAAGGGGTCGAGTTCGATCTTTTCGGTTTCAGCcg                                                         <  7:279600‑M1/147‑1 (MQ=255)                                                                                                 TCGGCCACCGGGCATGGGCGCACAGGGGCAGAGGCCCGGGTTGCCGAGGCGTTGCAGGGAATGGCCGAGCAACTGCGGGCATGGCGCCAGGCGCA‑TCCGCAGGCGACGCTGGAAGGGGTCGAGTTCGATCTTTTCGGTTTCAGCcgcgg                                                      <  3:108053‑M1/149‑1 (MQ=255)                                                                                                    gcaacccgggcctctgcccctgtgcgcccatgcccggtggccgaggcgtTGCAGGGAATGGCCGAGCAACTGCGGGCATGGCGCCAGGCGCA‑TCCGCAGGCGACGCTGGAAGGGGTc                                                                                   <  8:241782‑M2/68‑1 (MQ=255)                                                                                                    gcaacccgggcctctgcccctgtgcgcccatgcccggtggccgaggcgtTGCAGGGAATGGCCGAGCAACTGCGGGCATGGCGCCAGGCGCA‑TCCGCAGGCGACGCTGGAAGGGGTc                                                                                   >  7:241782‑M2/50‑117 (MQ=255)                                                                                                       aCCGGGCATGGGCGCACAGGGGCAGAGGCCCGGGTTGCCGAGGCGTTGCAGGGAATGGCCGAGCAACTGCGGGCATGGCGCCAGGCGCA‑TCCGCAGGCGACGCTGGAAGGGGTCGAGTTCGATCTTTTCGGTTTCAGCCgcggc‑gcggc                                               <  2:179322/149‑1 (MQ=255)                                                                                                                 ggCGCACAGGGGCAGAGGCCCGGGTTGCCGAGGCGTTGCAGGGAATGGCCGAGCAACTGCGGGCATGGCGCCAGGCGCA‑TCCGCAGGCGACGCTGGAAGGGGGCGAGTTCGATCTTTTCGGTTTCAGCCGCGGC‑GCGGCAGCGGTGCgg                                     <  7:70187/149‑1 (MQ=255)                                                                                                                  gcgcACAGGGGCAGAGGCCCGGGTTGCCGAGGCGTTGCAGGGAATGGCCGAGCAACTGCGGGCATGGCGCCAGGCGCA‑TCCGCAGGCGACGCTGGAAGGGGTCGAGTTCGATCTTTTCGGTTTCAGCCGCGGC‑GCGGCAGCGGTGCgg                                     >  6:312571/1‑148 (MQ=255)                                                                                                                  gcgcACAGGGGCAGAGGCCCGGGTTGCCGAGGCGTTGCAGGGAATGGCCGAGCAACTGCGGGCATGGCGCCAGGCGCA‑TCCGCAGGCGACGCTGGAAGGGGTCGAGTTCGATCTTTTCGGTTTCAGCCGCGGC‑GCGGCAGCGGTGCgg                                     >  7:112563/1‑148 (MQ=255)                                                                                                                       caGGGGCAGAGGCCCGGGTTGCCGAGGCGTTGCAGGGAATGGCCGAGCAACTGCGGGCATGGCGCCAGGCGCA‑TCCGCAGGCGTCGCTGGAAGGGGTCGAGTTCGATCTTTTCGGTTTCAGCCGCGGC‑GCGGCAGCGGTGCGGCATCTg                               <  8:26079/149‑1 (MQ=255)                                                                                                                       caGGGGCAGAGGCCCGGGTTGCCGAGGCGTTGCAGGGAATGGCCGAGCAACTGCGGGCATGGCGCCAGGCGCA‑TCCGCAGGCGACGCTGGAAGGGGTCGAGTTCGATCTTTTCGGTTTCAGCCGCGGC‑GCGGCAGCGGTGCGGCATCTg                               <  3:70855/149‑1 (MQ=255)                                                                                                                              agagGCCCGGGTTGCCGAGGCGTTGCAGGGAATGGCCGAGCAACTGCGGGCATGGCGCCAGGCGCA‑TCCGCAGGCGACGCTGGAAGGGGTCGAGTTCGATCTTTTCGGTTTCAGCCGCGGC‑GCGGCAGCGGTGCGGCATCTGGCCAAcc                        >  2:103386/1‑149 (MQ=255)                                                                                                                               gagGCCCGGGTTGCCGAGGCGTTGCAGGGGATGGCCGAGCAACTGCGGGCATGGCGCCAGGCGCA‑TCCGCAGGCGACGCTGGAAGGGGTCGAGTTCGATCTTTTCGGTTTCAGCCGCGGCAGCGGCAGCGGTGCGGCATCTGGCCAAcc                        <  1:185612/149‑1 (MQ=255)                                                                                                                                            ccgaggcgtTGCAGGGAATGGCCGAGCAACTGCGGGCATGGCGCCAGGCGCA‑TCCGCAGGCGACGCTGGAACGGGTCGAGTTCGATCTTTTCGGTTTCAGCCGCGGC‑GCGGCAGCGGTGCGGCATCTGGCCAACCTGCTGCACGATGgc          <  1:103386‑M2/140‑1 (MQ=255)                                                                                                                                             cgaggcgtTGCAGGGAATGGCCGAGCAACTGCGGGCATGGCGCCAGGCGCA‑TCCGCAGGCGACGCTGGAAGGGGTCGAGTTCGATCTTTTCGGTTTCAGCCGCGGC‑GCGGCAGCGGTGCGGCATCTGGCCAACCTGCTGCACGATGgcg         >  5:69905‑M2/9‑149 (MQ=255)                                                                                                                                             cgaggcgtTGCAGGGAATGGCCGAGCAACTGCGGGCATGGCGCCAGGCGCA‑TCCGCAGGCGACGCTGGAAGGGGTCGAGTTCGATCTTTTCGGTTTCAGCCGCGGC‑GCGGCAGCGGTGCGGCATCTGGCCAACCTGCTGCACGATGgcg         >  3:198598‑M2/9‑149 (MQ=255)                                                                                                                                              gaggcgtTGCAGGGAATGGCCGAGCAACTGCGGGCATGGCGCCAGGCGCA‑TCCGCAGGCGACGCTGGAAGGGGTCGAGTTCGATCTTTTCGGTTTCAGCCGCGGC‑GCGGCAGCGGTGCGGCATCTGGCCAACCTGCTGCACGATGgcgc        >  2:150681‑M2/8‑149 (MQ=255)                                                                                                                                              gaggcgtTGCAGGGAATGGCCGAGCAACTGCGGGCATGGCGCCAGGCGCA‑TCCGCAGGCGACGCTGGAAGGGGTCGAGTTCGATCTTTTCGGTTCCAGCCGCGGC‑GCGGCAGCGGTGCGGCATCTGGCCAACCTGCTGCACGATGgcgc        >  3:22257‑M2/8‑149 (MQ=255)                                                                                                                                                  cgtTGCAGGGAATGGCCGAGCAACTGCGGGCATGGCGCCAGGCGCA‑TCCGCAGGCGACGCTGGAAGGGGTCGAGTTCGATCTTTTCGGTTTCAGCCGCGGC‑GCGGCAGCGGTGCGGCATCTGGCCAACctgc                     <  4:4397‑M2/129‑1 (MQ=255)                                                                                                                                                  cgtTGCAGGGAATGGCCGAGCAACTGCGGGCATGGCGCCAGGCGCA‑TCCGCAGGCGACGCTGGAAGGGGTCGAGTTCGATCTTTTCGGTTTCAGCCGCGGC‑GCGGCAGCGGTGCGGCATCTGGCCAACctgc                     >  3:4397‑M2/4‑132 (MQ=255)                                                                                                                                                    tTGCAGGGAATGGCCGAGCAACTGCGGGCATGGCGCCAGGCGCA‑TCCGCAGGCGACGCTGGAAGGGGTCGAGTTCGATCTTTTCGGTTTCAGCCGCGGC‑GCGGCAGCGGTGCGGCATCTGGCCAACCTGCTGCACGATGGCgcgggcgg  <  8:109760‑M2/148‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                      GCTGATGCTGCCGGTGCCGACGGGCCGCAGGCGTTCTTGAAGCGCTATGTGGAAGGCGTGGGCACGCTGGCGGGTGAAGCCGACCATGTCTACGCCTCGGCCACCGGGCATGGGCGCACAGGGGCAGAGGCCCGGGTTGCCGAGGCGTTGCAGGGAATGGCCGAGCAACTGCGGGCATGGCGCCAGGCGCA‑TCCGCAGGCGACGCTGGAAGGGGTCGAGTTCGATCTTTTCGGTTTCAGCCGCGGC‑GCGGCAGCGGTGCGGCATCTGGCCAACCTGCTGCACGATGGCGCGGGCGG  >  NC_002947/2310433‑2310728

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.