New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 2915352 =27 (0.520)3 (0.060) 3/254 NT 8.2% coding (4372/10827 nt) PP_2561 hemolysin‑type calcium‑binding bacteriocin
?NC_002947 2915460 = 41 (0.830)coding (4480/10827 nt) PP_2561 hemolysin‑type calcium‑binding bacteriocin

GCTGAGCCTGCGGGTCAAGGCGATCTATCAGGATGCCCATGGCACCACCGAAGTGCTGTACTCGCAGCCTACCACCGTGGTGCAACCGGGCGCGCCCGTGGTGCCGACAGTGGCCACCCCGGTGGTGGATGCCAGTGACGGCGGTGCCGGCCTGCACATGGTGCGCTCCGACCTGAACTTCATCCTCGCGCAAATCAAGATTGCCGAGGCCGATGCCGCCGGGCAGGACATCCTCTCGCTGATCCCCAACGTCCGTGCAGCCATGGGCCTGCGTGCGGTGGATGGCTCGAACAAC  >  NC_002947/2915312‑2915606
                                                                                                                                                     |                                                                                                                                                  
cgaggatgaagttcaggtcggagcgcaccatgtgcaggccGGCACCACCGAAGTGCTGTACTCGCAGCCTACCACCGTGGTGCAACCGGGCGCGCCCGTGGTGCCGACAGTGGCCACCCCGGTGGTGGATGCCAGTGACGGCGGTGCCg                                                                                                                                                    >  5:50735‑M1/41‑149 (MQ=255)
          cGGGTCAAGGCGATCTATCAGGATGCCCATGGCACCACCGAAGTGCTGTACTCGCAGCCTACCACCGTGGTGCAACCGGGCGCGCCCGTGGTGCCGACAGTGGCCACCCCGGTGGTGGATGCCAGTGACGGCGGTGCCGGCCTGcac                                                                                                                                            <  6:297196/147‑1 (MQ=255)
                           tCAGGATGCCCATGGCACCACCGAAGTGCTGTACTCGCAGCCTACCACCGTGGTGCAACCGGGCGCGCCCGTGGTGCCGACAGTGGCCACCCCGGTGGTGGATGCCAGTGACGGCGGTGCCGGCCTGCACATGGTGCGCTCCGACCTg                                                                                                                          >  7:252604/1‑148 (MQ=255)
                           tCAGGATGCCCATGGCACCACCGAAGTGCTGTACTCGCAGCCTACCACCGTGGTGCAACCGGGCGCGCCCGTGGTGCCGACAGTGGCCACCCCGGTGGTGGATGCCAGTGACGGCGGTGCCGGCCTGCACATGGTGCGCTCCGACCTg                                                                                                                          >  6:203330/1‑148 (MQ=255)
                           tCAGGATGCCCATGGCACCACCGAAGTGCTGTACTCGCAGCCTACCACCGTGGTGCAACCGGGCGCGCCCGTGGTGCCGACAGTGGCCACCCCGGTGGTGGATGCCAGTGACGGCGGTGCCGGCCTGCACATGGTGCGCTCCGACCTg                                                                                                                          >  6:164337/1‑148 (MQ=255)
                             aGGATGCCCATGGCACCACCGAAGTGCTGTACTCGCAGCCTACCACCGTGGTGCAACCGGGCGCGCCCGTGGTGACGACAGTGGCCACCCCGGTGGTGGATGCCAGTGACGGCGGTGCCGGCCTGCACATGGTGCGCTCCGACCTGAAc                                                                                                                       >  7:117284/1‑149 (MQ=255)
                               gATGCCCATGGCACCACCGAAGTGCTGTACTCGCAGCCTACCACCGTGGTGCAACCGGGCGCGCCCGTGGTGCCGACAGTGGCCACCCCGGTGGTGGATGCCAGTGACGGCGGTGCCGGCCTGCACATGGTGCGCTCCGACCTGAACtt                                                                                                                     >  1:202445/1‑149 (MQ=255)
                                     cATGGCACCACCGAAGTGCTGTACTCGCAGCCTACCACCGTGGTGCAACCGGGCGCGCCCGTGGTGCCGACAGTGGCCACCCCGGTGGTGGATGCCAGTGACGGCGGTGCCGGCCTGCACATGGTGCGCTCCGACCTGAACTTCATCCt                                                                                                               <  2:202445/149‑1 (MQ=255)
                                        cggcaccgccgtcactggcatccaccaccggggtggccactgtcggcaccacgggcgcgcccggttgcaccacggtggtaggctgcgagtacagcacttcggtggtgccGGCCTGCACATGGTGCGCTCCGACCTGAACTTCATCCTcg                                                                                                             >  5:50735‑M2/110‑149 (MQ=255)
                                         ggcaccgccgtcactggcatccaccaccggggtggccactgtcggcaccacgggcgcgcccggttgcaccacggtggtaggctgcgagtacagcacttcggtggtgccGGCCTGCACATGGTGCGCTCCGACCTGAACTTCATCCTcgc                                                                                                            >  4:124702‑M2/109‑149 (MQ=255)
                                         gCACCACCGCATGGGGGTACTCGCCTCCTACCACCGTGGTGCAACCGGGCGGGCCCGTGGGGGCGTCAGTGGGCACCCCGGTGGTGGTTGCCATGTGACGGCGGTGCCGGCCTGCACATGGTGCGCTCCGACCTGAACTCCATCCTcgc                                                                                                            <  1:253297/149‑1 (MQ=255)
                                                 gAAGTGCTGTACTCGCAGCCTACCACCGTGGTGCAACCGGGCGCGCCCGTGGTGCCGACAGTGGCCACCCCGGTGGTGGATGCCAGTGACGGCGGTGCCGGCCTGCACATGGTGCGCTCCGACCTGAACTTCATCCTCGCGCAAATCaa                                                                                                   <  5:203330/149‑1 (MQ=255)
                                                   aGTGCTGTACTCGCAGCCTACCACCGTGGTGCAACCGGGCGCGCCCGTGGTGCCGACAGTGGCCACCCCGGTGGTGGATGCCAGTGACGGCGGTGCCGGCCTGCACATGGTGCGCTCCGACCTGAACTTCATCCTCGCGCAAATCAAGa                                                                                                 <  7:81702/149‑1 (MQ=255)
                                                     tGCTGTACTCGCAGCCTACCACCGTGGTGCAACCGGGCGCGCCCGTGGTGCCGACAGTGGCCACCCCGGTGGTGGATGCCAGTGACGGCGGTGCCGGCCTGCACATGGTGCGCTCCGACCTGAACTTCATCCTCGCGCAAATCAAGAtt                                                                                               >  4:36330/1‑149 (MQ=255)
                                                       cTGTACTCGCAGCCTACCACCGTGGTGCAACCGGGCGCGCCCGTGGTGCCGACAGTGGCCACCCCGGTGGTGGATGCCAGTGACGGCGGTGCCGGCCTGCACATGGTGCGCTCCGACCTGAACTTCATCCTCGCGCAAATCAAGATTGc                                                                                             >  7:43887/1‑149 (MQ=255)
                                                        tGTACTCGCAGCCTACCACCGTGGTGCAACCGGGCGCGCCCGTGGTGCCGACAGTGGCCACCCCGGTGGTGGATGCCAGTGACGGCGGTGCCGGCCTGCACATGGTGCGCTCCGACCTGAACTTCATCCTCGCGCAAATCAAGATTGcc                                                                                            >  3:311682/1‑149 (MQ=255)
                                                         gTACTCGCAGCCTACCACCGTGGTGCAACCGGGCGCGCCCGTGGTGCCGACAGTGGCCACCCCGGTGGTGGATGCCAGTGACGGCGGTGCCGGCCTGCACATg                                                                                                                                         <  2:238091/103‑1 (MQ=255)
                                                         gTACTCGCAGCCTACCACCGTGGTGCAACCGGGCGCGCCCGTGGTGCCGACAGTGGCCACCCCGGTGGTGGATGCCAGTGACGGCGGTGCCGGCCTGCACATg                                                                                                                                         >  1:238091/1‑103 (MQ=255)
                                                           aCTCGCAGCCTACCACCGTGGTGCAACCGGGCGCGCCCGTGGTGCCGACAGTGGCCACCCCGGTGGTGGATGCCAGTGACGGCGGTGCCGGCCTGCACATGGTGCGCCCCGACCTGAACTTCATCCTCGCGCAAATCAAGATTGCCGAg                                                                                         >  5:275632/1‑149 (MQ=255)
                                                             tCGCAGCCTACCACCGTGGTGCAACCGGGCGCGCCCGTGGTGCCGACAGTGGCCACCCCGGTGGTGGATGCCAGTGACGGCGGTGCCGGCCTGCACATGGTGCGCTCCGACCTGAACTTCATCCTCGCGCAAATCAAGATTGcccggcg                                                                                       >  5:292956/1‑144 (MQ=255)
                                                             tCGCAGCCTACCACCGTGGTGCAACCGGGCGCGCCCGTGGTGCCGACAGTGGCCACCCCGGTGGTGGATGCCAGTGACGGCGGTGCCGGCCTGCACATGGTGCGCTCCGACATGAACTTCAGCAGCGCGCAAAACAACATTGCCGAgga                                                                                       >  8:200132/1‑148 (MQ=255)
                                                                    cggggtggccactgtcggcaccacgggcgcgcccggttgcaccacggtggtaggctgcgagtacagcacttcggtggtgccGGCCTGCACATGGTGCGCTCCGACCTGAACTTCATCCTCGCGCAAATCAAGATTGCCGAGGCCGATgc                                                                                 <  3:124702‑M2/68‑1 (MQ=255)
                                                                       ccaccGTGGTGCAACCGGGCGCGCCCGTGGTGCCGACAGTGGCCACCCCGGTGGTGGATGCCAGTGACGGCGGTGCCGGCCTGCACATGGTGCGCTCCGACCTGAACTTCATCCTCGCGCAAATCAAGATTGCCGAGGCCGATgccgcc                                                                             >  5:209431/1‑149 (MQ=255)
                                                                       ccaccGTGGTGCAACCGGGCGCGCCCGTGGTGCCGACAGTGGCCACCCCGGTGGTGGATGCCAGTGACGGCGGTGCCGGCCTGCACATGGTGCGCTCCGACCTGAACTTCATCCTCGCGCAAATCAAGATTGCCGAGGCCGATgccgc                                                                              <  2:185955/148‑1 (MQ=255)
                                                                        caccGTGGTGCAACCGGGCGCGCCCGTGGTGCCGACAGTGGCCACCCCGGTGGTGGATGCCAGTGACGGCGGTGCCGGCCTGCACATGGTGCGCTCCGACCTGAACTTCATCCTCGCGCAAATCAAGATTGCCGAGGCCGATGccgccg                                                                            >  7:125569/1‑149 (MQ=255)
                                                                        caccGTGGTGCAACCGGGCGCGCCCGTGGTGCCGACAGTGGCCACCCCGGTGGTGGATGCCAGTGACGGCGGTGCCGGCCTGCACATGGTGCGCTCCGACCTGAACTTCATCCTCGCGCAAATCAAGATTGCCGAGGCCGATGccgccg                                                                            >  6:226391/1‑149 (MQ=255)
                                                                         accGTGGTGCAACCGGGCGCGCCCGTGGTGCCGACAGTGGCCACCCCGGTGGTGGATGCCAGTGACGGCGGTGCCGGCCTGCACATGGTGCGCTCCGACCTGAACTTCATCCTCGCGCAAATCAAGATTGCCGAGGCCGATGCCGCCgg                                                                           >  4:51495/1‑149 (MQ=255)
                                                                                  cAACCGGGCGCGCCCGTGGTGCCGACAGTGCCCACCCCGGTGGTGGATGCCAGTGACGGCGGTGCCGGCCTGCACATGGTGCGCTCCGACCTGAACTTCATCCTCGCGCAAATCAAGATTGCCGAGGCCGATGCCGCCGGGCAGGACAt                                                                  >  1:28352/1‑149 (MQ=255)
                                                                                     ccGGGCGCGCCCGTGGTGCCGACAGTGGCCACCCCGGTGGTGGATGCCAGTGACGGCGGTGCCGGCCTGCACATGGTGCGCTCCGACCTGAACTTCATCCTCGCGCAAATCAAGATTGCCGAGGCCGATGCCGCCGGGCAGGACATcc                                                                >  6:115552/1‑148 (MQ=255)
                                                                                        ggCGCGCCCGTGGTTCCGACAGTGGCCACCCCGGTGGTGGATGCCAGTGACGGCGGTGCCGGCCTGCACATGGTGCGCTCCGACCTGAACTTCATCCTCGCGCAAATCAAGATTGCCGAGGCCGATGCCGCCGGGCAGGACATCCtctc                                                            <  4:203449/149‑1 (MQ=255)
                                                                                           gcgcCCGTGGTGCCGACAGTGGCCACCCCGGTGGTGGATGCCAGTGACGGCGGTGACGGCCTGCACATGGTGCGCTCCGACCTGAACTTCATCCTCGCGCAAATCAAGATTGCCGAGGCCGATGCCGCCGGGCAGGACATCCTCTCGCt                                                         >  7:32192/1‑149 (MQ=255)
                                                                                            cgcCCGTGGTGCCGACAGTGGCCACCCCGGTGGTGGATGCCAGTGACGGCGGTGCCGGCCTGCACATGGTGCGCTCCGACCTGAACTTCATCCTCGCGCAAATCAAGATTGCCGAGGCCGATGCCGCCGGGCAGGACATCCTCTCGCt                                                         >  8:256210/1‑148 (MQ=255)
                                                                                                cGTGGTGCCGACAGTGGCCACCCCGGTGGTGGATGCCAGTGACGGCGGTGCCGGCCTGCACATGGTGCGCTCCGACCTGAACTTCATCCTCGCGCAAATCAAGATTGCCGAGGCCGATGCCGCCGGGCAGGACATCCTCTCGCTGATcc                                                    <  5:226391/149‑1 (MQ=255)
                                                                                                        cGACAGTGGCCACCCCGGTGGTGGATGCCAGTGACGGCGGTGCCGGCCTGCACATGGTGCGCTCCGACCTGAACTTCATCCTCGCGCAAATCAAGATTGCCGAGGCCGATGCCGCCGGGCAGGACATCCTCTCGCTGATCCCCAACGTc                                            >  5:153025/1‑149 (MQ=255)
                                                                                                              tGGCCACCCCGGTGGTGGATGCCAGTGACTGCTGTGCCGGCCTGCACATGCTGCGCTCCGACCTGAACTTCATCCTCGCGCAAAACAAGATTGCCGAGGCCGATGCCCCCGGGCAGGACAACCGCTCGCTCATCCCAAACGAACGTGCa                                      >  6:248636/1‑149 (MQ=255)
                                                                                                              tGGCCACCCCGGTGGTGGATGCCAGTGACGGCGGTGCCGGCCTGCACATGGTGCGCTCCGACCTGAACTTCATCCTCGCGCAAATCAAGATTGCCGAGGCCGATGCCGCCGGGCAGGACATCCTCTCGCTGATCCCCAACGTCCGTGCa                                      <  8:43887/149‑1 (MQ=255)
                                                                                                               ggCCACCCCGGTGGTGGATGCCAGTGACGGCGGTGCCGGCCTGCACATGGTGCGCTCCGACCTGAACTTCATCCTCGCGCAAATCAAGATTGCCGAGGCCGATGCCGCCGGGCAGGACATCCTCTCGCTGATCCCCAACGTCCGTGCa                                      <  3:61561/148‑1 (MQ=255)
                                                                                                                       cGGTGGTGGATGCCAGTGACGGCGGTGCCGGCCTGCACATGGTGCGCTCCGACCTGAACTTCATCCTCGCGCAAATCAAGATTGCCGAGGCCGATGCCGCCGGGCAGGACATCCTCTCGCTGATCCCCAACGTCCGTGCAGCCATGGGc                             >  3:299392/1‑149 (MQ=255)
                                                                                                                         gtggtgGATGCCAGTGACGGCGGTGCCGGCCTGCACATGGTGCGCTCCGACCTGAACTTCATCCTCGCGCAAATCAAGATTGCCGAGGCCGATGCCGCCGGGCAGGACATCCTCTCGCTGATCCCCAACGTCCGTGCAGCCATGGGCCt                           <  5:164337/149‑1 (MQ=255)
                                                                                                                           tgtggCTGCGAGTGACGGCGGTGCCGGCCGGCACATGGTGCGCTCCGACCTGAACTTCATCCTCGCGCAAATCAAGATTGCCGAGGCCGATGCCGCCGGGCAGGACATCCTCTCGCTGATCCCCAACGTCCGTGCAGCCATGGGCCtgc                         <  8:32192/148‑1 (MQ=255)
                                                                                                                                   ccAGTGACGGCGGTGCCGGCCTGCACATGGTGCGCTCCGACCTGAACTTCATCCTCGCGCAAATCAAGATTGCCGAGGCCGATGCCGCCGGGCAGGACATCCTCTCGCTGATCCCCAACGTCCGTGCAGCCATGGGCCTGCGTGCGGTg                 <  2:12623/149‑1 (MQ=255)
                                                                                                                                   ccAGGGACGGCGGTGCCGGCCTGCACATGGTGCGCTCCGACCTGAACTTCATCCTCGCGCAAATCAAGATTGCCGAGGCCGATGCCGCCGGGCAGGACATCCTCTCGCTGATCCCCAACGTCCGTGCAGCCATGGGCCTGCGTGCGGTg                 <  8:117284/149‑1 (MQ=255)
                                                                                                                                    cAGTGACGGCGGTGCCGGCCTGCACATGGTGCGCTCCGACCTGAACTTCATCCTCGCGCAAATCAAGATTGCCGAGGCCGATGCCGCCGGGCAGGACATCCTCTCGCTGATCCCCAACGTCCGTGCAGCCATGGGCCTGCGTGCGGTg                 >  1:107917/1‑148 (MQ=255)
                                                                                                                                    cAGTGACGGCGGTGCCGGCCTGCACATGGTGCGCTCCGACCTGAACTTCATCCTCGCGCAAATCAAGAACGCCGAGGCCGATGCCGCCGGGCAGGACATCCTCTCGCTGATCCCCAACGTCCGTGCAGCCATGGGCCTGCGTGCGGTg                 >  1:265583/1‑148 (MQ=255)
                                                                                                                                       gTGACGGCGGTTCCGGCCTGCACATGGTGCGCTCCGACCTGAACTTCATCCTCGCGCAAATCTCGATTGCCGAGGCCGATGCCGCCGGGCAGGACATCCTCTCGCTGATCCACAACGTCCGTGCAGCCATGGGCCTGCGTGCGGTGGAt              <  5:248636/149‑1 (MQ=255)
                                                                                                                                           cggcggTGCCGGCCTGCACATGGTGCGCTCCGACCTGAACTTCATCCTCGCGCAAATCAAGATTGCCGAGGCCGATGCCGCCGGGCAGGACATCCTCTCGCTGATCCCCAACGTCCGTGCAGCCATGGGCCTGCGTGCGGTGGATGGCt          <  6:209431/149‑1 (MQ=255)
                                                                                                                                            ggcggTGCCGGCCTGCACATGGTGCGCTCCGACCTGAACTTCATCCTCGCGCAAATCAAGATTGCCGAGGCCGATGCCGCCGGGCAGGACATCCTCTCGCTGATCCCCAACGTCCGTGCAGCCATGGGCCTGCGTGCGGTGGATGGCTc         >  6:162228/1‑149 (MQ=255)
                                                                                                                                            ggcggTGCCGGCCTGCACATGGTGCGCTCCGACCTGAACCTCATCCTCGCGCAAATCAAGATTGCCGAGGCCGATGCCGCCGGGCAGGACATCCTCTCGCTGATCCCCAACGTCCGTGCAGCCATGGGCCt                           <  8:121759/131‑1 (MQ=255)
                                                                                                                                            ggcggTGCCGGCCTGCACATGGTGCGCTCCGACCTGAACCTCATCCTCGCGCAAATCAAGATTGCCGAGGCCGATGCCGCCGGGCAGGACATCCTCTCGCTGATCCCCAACGTCCGTGCAGCCATGGGCCt                           >  7:121759/1‑131 (MQ=255)
                                                                                                                                                  gccGGCCTGCACATGGTGCGCTCCGACCTGAACTTCATCCTCGCGCAAATCAAGATTGCCGAGGCCGATGCCGCCGGGCAGGACATCCTCTCGCTGATCCCCAACGTCCGTGCAGCCATGGGCCTGCGTGCGGTGGATGGGTCGaacaa   >  7:277124‑M2/4‑149 (MQ=255)
                                                                                                                                                   ccGGCCTGCACATGGTGCGCTCCGACCTGAACTTCATCCTCGCGCAAATCAAGATTGCCGAGGCCGATGCCGCCGGGCAGGACATCCTCTCGCTGATCCCCAACGTCCGTGCAGCCATGGGCCTGCGTGCGGTGGATGGCTCGaacaac  <  2:28352‑M2/147‑1 (MQ=255)
                                                                                                                                                   ccGGCCTGCACATGGGGCGCTCCGACCTGAACTTCATCCTCGCGCAAATCAAGATTGCCGAGGCCGATGCCGCCGGGCAGGACATCCTCTCGCTGATCCCCAACGTCCGTGCAGCCATGGGCCTGCGTGCGGTGGATGGCTCGaacaac  <  7:200132‑M2/147‑1 (MQ=255)
                                                                                                                                                    cGGCCTGCACATGGTGCGCTCCGACCTGAACTTCATCCTCGCGCAAATCAAGATTGCCGAGGCCGATGCCGCCGGGCAGGACATCCTCTCGCTGATCCCCAACGTCCGTGCAGCCATGGGCCtgcgt                       <  7:273977‑M2/126‑1 (MQ=255)
                                                                                                                                                    cGGCCTGCACATGGTGCGCTCCGACCTGAACTTCATCCTCGCGCAAATCAAGATTGCCGAGGCCGATGCCGCCGGGCAGGACATCCTCTCGCTGATCCCCAACGTCCGTGCAGCCATGGGCCtgcgt                       >  8:273977‑M2/2‑127 (MQ=255)
                                                                                                                                                     |                                                                                                                                                  
GCTGAGCCTGCGGGTCAAGGCGATCTATCAGGATGCCCATGGCACCACCGAAGTGCTGTACTCGCAGCCTACCACCGTGGTGCAACCGGGCGCGCCCGTGGTGCCGACAGTGGCCACCCCGGTGGTGGATGCCAGTGACGGCGGTGCCGGCCTGCACATGGTGCGCTCCGACCTGAACTTCATCCTCGCGCAAATCAAGATTGCCGAGGCCGATGCCGCCGGGCAGGACATCCTCTCGCTGATCCCCAACGTCCGTGCAGCCATGGGCCTGCGTGCGGTGGATGGCTCGAACAAC  >  NC_002947/2915312‑2915606

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.