New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5476368	61 (1.170)	7 (0.140)	7/252	NT	10.5%	coding (598/1317 nt)	PP_4813	PAP2 family protein/DedA family protein
	?	NC_002947	= 5476392	62 (1.260)					coding (622/1317 nt)	PP_4813	PAP2 family protein/DedA family protein

CTGCCCGGCTGGGCCACCGGCGCCGCCATGCGCCTGCCCCTGCCGGAAGGCTTCTGGCTGGACGCCGGGATCATAGCCGGCGCCCTCGCGGTGCTGATCGGCCTGAGCCTCAATACCAGCCTGCGTGACCAGCGCCACGGCACCCGGCTGGTTGCCGCGCTCAGCTTCATCGCCCTGGCCGG‑TGTATTCCTCG‑GCTGGCCCTACTTCCATGAGTTCGACCAAGGCGTGATGACACTGGTCCAGGAGCATCGCAGCCAGGCCATCGACGGCACCGTGGTGCTGGTGACACGGC  >  NC_002947/5476248‑5476539                                                                                                                                                 |                                                                                                                                                      ctgcCCGGCTGGGCCACCGGCGCCGCCATGCGCCTGCCCCTGCCGGAAGGCTTCTGGCTGGACGCCGGGATCATAGCCGGCGCCCTCGCGGTGCTGATCGGCCTGAGCCTCAATACCAGCCTGCGTGACCAGCGCCACGGCACCCggc                                                                                                                                                    >  5:240853‑M2/1‑145 (MQ=255)    cccGGCTGGGCCACCGGCGCCGCCATGCGCCTGCCCCTGCCGGAAGGCTTCTGGCTGGACGCCGGGATCATAGCCGGCGCCCTCGCGGTGCTGATCGGCCTGAGCCTCAATACCAGCCTGCGTGACCAGCGCCACGGCACCCggctg                                                                                                                                                  >  5:281092‑M2/1‑142 (MQ=255)    cccGGCTGGGCCACCGGCGCCGCCATGCGCCTGCCCCTGCCGGAAGGCTTCTGGCTGGACGCCGGGATCATAGCCGGCGCCCTCGCGGTGCTGATCGGCCTGAGCCTCAATACCAGCCTGCGTGACCAGCGCCACGGCACCCggctg                                                                                                                                                  >  1:170058‑M2/1‑142 (MQ=255)    cccGGCTGGGCCACCGGCGCCGCCATGCGCCTGCCCCTGCCGGAAGGCTTCTGGCTGGACGCCGGGATCATAGCCGGCGCCCTCGCGGTGCTGATCGGCCTGAGCCTCAATACCACCCTGCGTGACCAGCGCCACGGCACCCggcaggt                                                                                                                                                <  4:136852‑M2/149‑8 (MQ=255)     ccGGCTGGGCCACCGGCGCCGCCATGCGCCTGCCCCTGCCGGAAGGCTTCTGGCTGGACGCCGGGATCATACCCGGCGCCCTCGCGGTGCTGATCGGCCTGAGCCTCAATACCAGCCTGCGTAACCAGCGCCACGGCACCCGGCTGGtt                                                                                                                                               <  1:104072/149‑1 (MQ=255)        gCTGGGCCACCGGCGCCGCCATGCGCCTGCCCCTGCCGGAAGGCTTCTGGCTGGACGCCGGGATCATAGCCGGCGCCCTCGCGGTGCTGATCGGCCTGAGCCTCAATACCAGCCTGCGTGACCAGCGCCACGGCACCCGGCTGGTTGcc                                                                                                                                            <  5:128850/149‑1 (MQ=255)        gCTGGGCCACCGGCGCCGCCATGCGCCTGCCCCTGCCGGAAGGCTTCTGGCTGGACGCCGGGATCATAGCCGGCGCACTCGCGGTGCTGATCGGCCTGAGCCTCAATACCAGCCTGCGTGACCTGCGCAACGGCACCCggctggtggcc                                                                                                                                            <  6:327460‑M2/149‑12 (MQ=255)            ggCCACCGGCGCCGCCATGCGCCTGCCCCTGCCGGAAGGCTTCTGGCTGGACGCCGGGATCATAGCCGGCGCCCTCGCGGTGCTGATCGGCCTGAGCCTCAATACCAGCCTGCGTGACCAGCGCCACGGCACCCGGCTGGTTGCCgcgc                                                                                                                                        <  7:304713/149‑1 (MQ=255)              ccACCGGCGCCGCCATGCGCCTGCCCCTGCCGGAAGGCTTCTGGCTGGACGCCGGGATCATAGCCGGCGCCCTCGCGGTGCTGATCGGCCTGAGCCTCAATACCAGCCTGCGTGACCAGCGCCACGGCACCCGGCTGGTTGCCGCGCTc                                                                                                                                      >  4:91611/1‑149 (MQ=255)              ccACCGGCGCCGCCATGCGCCTGCACCTGCCGGAAGGATTCTGGCTGGACGCCGGAATCATAGCCGGCGACCTCGAGGTGCTGATCGGCCTGAGCCTCAATAACAGCCTGCGTGACCAGCGCCACGGCACACGGCTGGTTGACGCGCt                                                                                                                                       >  7:47465/1‑148 (MQ=255)                       ccgccATGCGCCTGCCCCTGCCGGAAGGCTTCTGGCTGGACGCCGGGATCATAGCCGGCGCCCTCGCGGTGCTGATCGGCCTGAGCCTCAATACCAGCCTGCGTGACCAGCGCCACGGCACCCGGCTGGTTGCCGCGCTCAGCTTCATc                                                                                                                             >  3:204255/1‑149 (MQ=255)                               cgcCTGCCCCTGCCGGAAGGCTTCTGGCTGGACGCCGGGATCATAGCCGGCGCCCTCGCGGTGCTGATCGGCCTGAGCCTCAATACCAGCCTGCGTGACCAGCGCCACGGCACCCGGCTGGTTGCCGCGCTCAGCTTCATCGCCCTgg                                                                                                                      <  3:239160/148‑1 (MQ=255)                                   tgcccctgccGGAAGGCTTCTGGCTGGACGCCGGGATCATAGCCGGCGCCCTCGCGGTGCTGATCGGCCTGAGCCTCAATACCAGCCTGCGTGACCAGCGCCACGGCACCCGGCTGGTTGCCGCGCTCAGCTTCATCGCCCTGGCCGg‑t                                                                                                                >  4:147632/1‑149 (MQ=255)                                   tgcccctgccGGAAGGCTTCTGGCTGGACGCCGGGATCATAGCCGGCGCCCTCGCGGTGCTGATCGGCCTGAGCCTCAATACCAGCCTGCGTGACCAGCGCCACGGCACCCGGCTGGTTGCCGCGCTCAGCTTCATCGCCCTGGCCGg‑t                                                                                                                >  7:16227/1‑149 (MQ=255)                                     cccctgccGGAAGGCTTCTGGCTGGACGCCGGGATCATAGCCGGCGCCCTCGCGGTGCTGATCGGCCTGAGCCTCAATACCAGCCTGCGTGACCAGCGCCACGGCACCCGGCTGGTTGCCGCGCTCAGCTTCATCGCCCTGGCCGg‑t                                                                                                                <  4:204255/147‑1 (MQ=255)                                     cccctgccGGAAGGCTTCTGGCTGGACGCCGGGATCATAGCCGGCGCCCTCGCGGTGCTGATCGGCCTGAGCCTCAATACCAGCCTGCGTGACCAGCGCCACGGCACCCGGCTGGTTGCCGCGCTCAGCTTCATCGCCCTGGCCGg‑t                                                                                                                <  4:276326/147‑1 (MQ=255)                                           ccGGAAGGCTTCTGGCTGGACGCCGGGATCATAGCCGGCGCCCTCGCGGTGCTGATCGGCCTGAGCCTCAATACCAGCCTGCGTGACCAGCGCCACGGCACCCGGCTGGTTGCCGCGCTCAGCTTCATCGCCCTGGCCGG‑TGTATTCCt                                                                                                        <  6:160084/149‑1 (MQ=255)                                           ccGGAAGGCTTCTGGCTGGACGCCGGGATCATAGCCGGCGCCCTCGCGGTGCTGATCGGCCTGAGCCTCAATACCAGCCTGCGTGACCAGCGCCACGGCACCCGGCTGGTTGCCGCGCTCAGCTTCATCGCCCTGGCCGG‑TGTATTCCt                                                                                                        >  3:107905/1‑149 (MQ=255)                                             ggAAGGCTTCTGGCTGGACGCCGGGATCATAGCCGGCGCCCTCGCGGTGCTGATCGGCCTGAGCCTCAATACCAGCCTGCGTGACCAGCGCCACGGCACCCGGCTGGTTGCCGCGCTCAGCTTCATCGCCCTGGCCGG‑TGTATTCCTCg                                                                                                      >  2:169666/1‑149 (MQ=255)                                                   cTTCTGGCTGGACGCCGGGATCATAGCCGGCGCCCTCGCGGTGCTGATCGGCCTGAGCCTCAATACCAGCCTGCGTGACCAGCGCCACGGCACCCGGCTGGTTGCCGCGCTCAGCTTCATCGCCCTGGCCGG‑TGTATTCCTCG‑GCTGGc                                                                                               <  2:140082/149‑1 (MQ=255)                                                   attCTGGCTGGACGCCGGGATCATAGCCGGCGCCCTCGCGGTGCTGATCGGCCTGAGCCTCAATACCAGCCTGCGTGACCAGCGCCACGGCACCCGGCTGGTTGCCGCGCTCATCTTCATCGCCCTGGCCGG‑TGTATTCCTCG‑GCTGGc                                                                                               <  7:117697/148‑1 (MQ=255)                                                    ttCTGGCTGGACGCCGGGATCATAGCCGGCGCCCTCGCGGTGCTGATCGGCCTGAGCCTCAATACCAGCCTGCGTGACCAGCGCCACGGCACCCGGCTGGTTGCCGCGCTCAGCTTCATCGCCCTGGCCGG‑TGTATTCCTCG‑GCTGGcc                                                                                              >  2:165053/1‑149 (MQ=255)                                                      ctggctggACGCCGGGATCATAGCCGGCGCCCTCGCGGTGCTGATCGGCCTGAGCCTCAATACCAGCCTGCGTGACCAGCGCCACGGCACCCGGCTGGTTGCCGCGCTCAGCTTCATCGCCCTGGCCGG‑TGTATTCCTCG‑GCTGGccc                                                                                             <  7:163363/148‑1 (MQ=255)                                                      ctggctggACGCCGGGATCATAGCCGGCGCCCTCGCGGTGCTGATCGGCCTGAGCCTCAATACCAGCCTGCGTGACCAGCGCCACGGCACCCGGCTGGTTGCCGCGCTCAGCTTCATCGCCCTGGCCGG‑TGTATTCCTCG‑GCTGGccc                                                                                             >  3:291597/1‑148 (MQ=255)                                                         gctggACGCCGGGATCATAGCCGGCGCCCTCGCGGTGCTGATCGGCCTGAGCCTCAATACCAGCCTGCGTGACCAGCGCCACGGCACCCGGCTGGTTGCCGCGCTCAGCTTCATCGCCCTGGCCGG‑TGTATTCCTCG‑GCTGGCCCTACt                                                                                         >  3:95733/1‑149 (MQ=255)                                                             gACGCCGGGATCATAGCCGGCGCCCTCGCGGTGCTGATCGGCCTGAGCCTCAATACCAGCCTGCGTGACCAGCGCCACGGCACCCGGCTGGTTGCCGCGCTCAGCTTCATCGCCCTGGCCGG‑TGTATTCCTCG‑GCTGGCCCTACTTcc                                                                                      <  1:54357/148‑1 (MQ=255)                                                              aCGCCGGGATCGTAGCCGGCGCCCTCGCGGTGCTGATCGGCCTGAGCCTCAATACCAGCCTGCGTGACCAGCGCCACGGCACCCGGCGGGTTGCCGCGCTCAGCTTCATCGCCCTGGCCGG‑GGTATTCCTCG‑GCTGGCCCTACTTCCAt                                                                                    <  6:155034/149‑1 (MQ=255)                                                              aCGCCGGGATCATAGCCGGCGCCCTCGCGGTGCTGATCGGCCTGAGCCTCAATACCAGCCTGCGTGACCAGCGCCACGGCACCCGGCTGGTTGCCGCGCTCAGCTTCATCGCCCTGGCCGG‑TGTATTCCTCG‑GCTGGCCCTACTTCCAt                                                                                    <  4:95733/149‑1 (MQ=255)                                                                         aTAGCCGGCGCCCTCGCGGTGCTGATCGGCCTGAGCCTCAATACCAGCCTGCGTGACCAGCGCCACGGCACCCGGCTGGTTGCCGCGCTCAGCTTCATCGCCCTGGCCGG‑TGTATTCCTCG‑GCTGGCCCTACTTCCATGAGTTCGAc                                                                           >  5:321713/1‑147 (MQ=255)                                                                          tAGCCGGCGCCCTCGCGGTGCTGATCGGCCTGAGCCTCAATACCAGCCTGCGTGACCAGCGCCACGGCACCCGGCTGGTTGCCGCGCTCAGCTTCATCGCCCTGGCCGG‑TGTATTCCTCG‑GCTGGCCCTACTTCCATGAGTTCGAcc                                                                          >  7:7430/1‑147 (MQ=255)                                                                          tAGCCGGCGCCCTCGCGGTGCTGATCGGCCTGAGCCTCAATACCAGCCTGCGTGACCAGCGCCACGGCACCCGGCTGGTTGCCGCGCTCAGCTTCATCGCCCTGGCCGG‑TGTATTCCTCG‑GCTGGCCCTACTTCCATGAGTTCGAcc                                                                          >  3:111001/1‑147 (MQ=255)                                                                            gCCGGCGCCCTCGCGGTGCTGATCGGCCTGAGCCTCAATACCAGCCTGCGTGACCAGCGCCACGGCACCCGGCTGGTTGCCGCGCTCAGCTTCATCGCCCTGGCCGG‑TGTATTCCTCG‑GCTGGCCCTACTTCCATGa                                                                                  <  2:95281/137‑1 (MQ=255)                                                                            gCCGGCGCCCTCGCGGTGCTGATCGGCCTGAGCCTCAATACCAGCCTGCGTGACCAGCGCCACGGCACCCGGCTGGTTGCCGCGCTCAGCTTCATCGCCCTGGCCGG‑TGTATTCCTCG‑GCTGGCCCTACTTCCATGa                                                                                  >  1:95281/1‑137 (MQ=255)                                                                             ccGGCGCCCTCGCGGTGCTGATCGGCCTGAGCCTCAATACCAGCCTGCGTGACCAGCGCCACGGCACCCGGCTGGTTGCCGCGCTCAGCTTCATCGCCCTGGCCGG‑TGTATTCCTCG‑GCTGGCCCTACTTCCATGAGTTCGACCAAGGc                                                                     >  1:249078/1‑149 (MQ=255)                                                                              cGGCGCCCTCGCGGTGCTGATCGGCCTGAGCCTCAATACCAGCCTGCGTGACCAGCGCCACGGCACCCGGCTGGTTGCCGCGCTCCGCTTCATCGCCCTGGCCGG‑TGTATTCCTCG‑GCTGGCCCTACTTCCATGAGTTCGACCAAGGCg                                                                    >  7:264542/1‑149 (MQ=255)                                                                              cGGCGCCCTCGCGGTGCTGATCGGCCTGAGCCTCAATACCAGCCTGCGTGACCAGCGCCACGGCACCCGGCTGGTTGCCGCGCTCAGCTTCATCGCCCTGGCCGG‑TGTATTCCTCGCGCTGGCCCTACTTCCATGAGTTCGACCAAGGc                                                                     <  1:38709/149‑1 (MQ=255)                                                                                 cgcCCTCGCGGTGCTGATCGGCCTGAGCCTCAATACCAGCCTGCGTGACCAGCGCCACGGCACCCGGCTGGTTGCCGCGCTCAGCTTCATCGCCCTGGCCGG‑TGTATTCCTCG‑GCTGGCCCTACTTCCATGAGTTCGACCAAGGCGtga                                                                 <  6:321713/149‑1 (MQ=255)                                                                                  gcCCTCGCGGTGCTGATCGGCCTGAGCCTCAATACCAGCCTGCGTGACCAGCGCCACGGCACCCGGCTGGTTGCCGCGCTCAGCTTCATCGCCCTGGCCGGTTGTATTCCTCG‑GCTGGCCCTACTTCCATGAGTTCGACCAAGGCGtga                                                                 <  1:234935/149‑1 (MQ=255)                                                                                  gcCCTCGCGGTGCTGATCGGCCTGAGCCTCAATACCAGCCTGCGTGACCAGCGCCACGGCACCCGGCTGGTTGCCGCGCTCAGCTTCATCGCCCTGGCCGG‑TGTATTCCTCG‑GCTGGCCCTACTTCCATGAGTTCGACCAAGGCGtgat                                                                <  2:318316/149‑1 (MQ=255)                                                                                    ccTCGCGGTGCTGATCGGCCCGAGCCTCAATACCAGCCTGCGTGACCAGCGCCACGGCACCCGGCTGGTTGCCGCGCTCAGCTTCATCGCCCTGGCCGG‑TGTATTCCTCG‑GCTGGCCCTACTTCCATGAGTTCGACCAAGGCGtgatga                                                              >  4:56025/1‑149 (MQ=255)                                                                                     cTCGCGGTGCTGATCGGCCTGAGCCTCAATACCAGCCTGCGTGACCAGCGCCACGGCACCCGGCTGGTTGCCGCGCTCAGCTTCATCGCCCTGGCCGG‑TGTATTCCTCG‑GCTGGCCCTACTTCCATGAGTTCGACCAAGGCGtgatga                                                              >  2:164375/1‑148 (MQ=255)                                                                                              cTGATCGGCCTGAGCCTCAATACCAGCCTGCGTGACCAGCGCCACGGCACCCGGCTGGTTGCCGCGCTCAGCTTCATCGCCCTGGCCGG‑TGTATTCCTCG‑GCTGGCCCTACTTCCATGAGTTCGACCAAGGCTTGATGACACTGGTc                                                      >  6:253276/1‑147 (MQ=255)                                                                                                gATCGGCCTGAGCCTCAATACCAGCCTGCGTGACCAGCGCCACGGCACCCGGCTGGTTGCCGCGCTCAGCTTCATCGCCCTGGCCGG‑TGTATTCCTCG‑GCTGGCCCTACTTCCATGAGTTCGACCAAGGCGTGATGACACTGGTCCAg                                                   >  8:131124/1‑148 (MQ=255)                                                                                                gATCGGCCTGAGCCTCAATACCAGCCTGCGTGACCAGCGCCACGGCACCCGGCTGGTTGCCGCGCTCAGCTTCATCGCCCTGGCCGG‑TGTATTCCTCG‑GCTGGCCCTACTTCCATCAGTTCGACCAAGGCGTGATGACACTGGTCCAg                                                   >  1:138578/1‑148 (MQ=255)                                                                                                 aTCGGCCTGAGCCTCAATACCAGCCTGCGTGACCAGCGCCACGGCACCCGGCTGGTTGCCGCGCTCAGCTTCATCGCCCTGGCCGG‑TGTATTCCTCG‑GCTGGCCCTACTTCCATGAGTTCGACCAAGGCTTGATGACACTGGTCCAGGa                                                 <  7:131124/149‑1 (MQ=255)                                                                                                  tCGGCCTGAGCCTCAATACCAGCCTGCGTGACCAGCGCCACGGCACCCGGCTGGTTGCCGCGCTCAGCTTCATCGCCCTGGCCGG‑TGTATTCCTCG‑GCTGGCCCTACTTCCATGAGTTCGACCAAGGCGTGATGACACTGGTCCAGGAg                                                <  1:165053/149‑1 (MQ=255)                                                                                                    ggCCTGAGCCTCAATACCAGCCTGCGTGACCAGCGCCACTGCACCCGGCTGGTTGCCGCGCTCAGCTTCATCGCCCTGGCCGG‑TGTATTCCTCG‑GCTGGCCCTACTTCCATGAGTTCGACCAAGGCGTGATGACACTGGTCCAGGAGc                                               <  3:136852/148‑1 (MQ=255)                                                                                                    ggCCTGAGCCTCAATACCAGCCTGCGTGACCAGCGCCACGGCACCCGGCTGGTTGCCGCGCTCAGCTTCATCGCCCTGGCCGG‑TGTATTCCTCG‑GCTGGCCCTACTTCCATGAGTTCGACCAAGGCGTGATGACACTGGTCCAGGAGc                                               <  6:29462/148‑1 (MQ=255)                                                                                                    ggCCTGAGCCTCAATACCAGCCTGCGTGACCAGCGCCACGGCACCCGGCTGGTTGCCGCGCTCAGCTTCATCGCCCTGGCCGG‑TGTATTCCTCG‑GCTGGCCCTACTTCCATGAGTTCGACCAAGGCGTGATGACACTGGTCCAGGAGCa                                              <  8:84616/149‑1 (MQ=255)                                                                                                    ggCCTGAGCCTCAATACCAGCCTGCGTGACCAGCGCCACGGCACCCGGCTGGTTGCCGCGCTCAGCTTCATCGCCCTGGCCGG‑TGTATTCCTCG‑GCTGGCCCTACTTCCATGAGTTCGACCAAGGCGTGATGACACTGGTCCAGGAGCa                                              >  2:209559/1‑149 (MQ=255)                                                                                                     gCCTGAGCCTCAATACCATCCTGCGTGACCAGCGCCACGGCACCCGGCTGGTTGCCGCGCTCAGCTTCATCGCCCTGGCCGG‑TGTATTCCTCG‑GCTGGCCCTACTTCCATGAGTTCGACCAAGGCGTGATGACACTGGTCCAGGAGCAt                                             <  5:323217/149‑1 (MQ=255)                                                                                                     gCCTGAGCCTCAATACCAGCCTGCGTGACCAGCGCCACGGCACCCggctggttgccgcgctcaggccgatcagcaccgcgagagcgccggctatgatcccggcgtccagccagaagccttccggcaggggcaggcgcatggcggcgccg                                               <  6:82205‑M2/149‑105 (MQ=255)                                                                                                     gCCTGAGCCTCAATACCAGCCTGCGTGACCAGCGCCACGGCACCCGGCTGGTTGCCGCGCTCAGCTTCATCGCCCTGGCCGG‑TGTATTCCTCG‑GCTGGCCCTACTTCCATGAGTTCGACCAAGGCGTGATGACACTGGTCCAGGAGCAt                                             >  7:270728/1‑149 (MQ=255)                                                                                                       cTGAGCCTCAATACCAGCCTGCGTGACCAGCGCCACGGCACCCGGCTGGTTGCCGCGCTCAGCTTCATCGCCCTGGCCGG‑TGTATTCCTCG‑GCTGGCCCTACTTCCATGAGTTCGACCAAGGCGTGATGACACTGGTCCAGGAGCATCg                                           >  2:144350/1‑149 (MQ=255)                                                                                                          ctcctcAATACCAGCCTGCGTGACCAGCGCCACGGCACCCggctggtattgaggctcaggccgatcagcaccgcgagggcgccggctatgatcccggcgtccagccagaagccttccggcaggggcaggcgcatggcggcgccggtggc                                          >  5:209532‑M2/3‑40 (MQ=255)                                                                                                             cTCAATACCAGCCTGCGTGACCAGCGCCACGGCACCCggctggtattgaggctcaggccgatcagcaccgcgagggcgccggctatgatcccggcgtccagccagaagccttccggcaggggcaggcgcatggcggcgccggtggc                                          <  6:209532‑M2/146‑110 (MQ=255)                                                                                                              tCAATACCAGCCTGCGTGACCAGCGCCACGGCACCCggctggtattgaggctcaggccgatcagcaccgcgagggcgccggctatgatcccggcgtcca                                                                                        <  4:274528‑M2/99‑64 (MQ=255)                                                                                                              tCAATACCAGCCTGCGTGACCAGCGCCACGGCACCCggctggtattgaggctcaggccgatcagcaccgcgagggcgccggctatgatcccggcgtcca                                                                                        >  3:274528‑M2/1‑36 (MQ=255)                                                                                                               cAATACCAGCCTGCGTGACCAGCGCCACGGCACCCGGCTGGTTGCCGCGCTCAGCTTCATCGCCCTGGCCGG‑TGTATTCCTCG‑GCTGGCCCTACTTCCATGAGTTCGACCAAGGCGTGATGACACTGGTCCAGGAGCATCGCAGCCAgg                                   >  6:146502/1‑149 (MQ=255)                                                                                                                aaTACCAGCCTGCGTGACCAGCGCCACGGCACCCGGCTGGTTGCCGCGCTCAGCTTCATCGCCCTGGCCGG‑TGTATTCCTCG‑GCTGGCCCTACTTCCATGAGTTCGACCAAGGCGTGATGACACTGGTCCAGGAGCATCGCAGCCAgg                                   <  5:146502/148‑1 (MQ=255)                                                                                                                aaTACCAGCCTGCGTGACCAGCGCCACGGCACCCGGCTGGTTGCCGCGCTCAGCTTCATCGCCCTGGCCGG‑TGTATTCCTCG‑GCTGGCCCTACTTCCATGAGTTCGACCAAGGCGTGATGACACTGGTCCAGGAGCATCGCAGCCAg                                    <  4:21254/147‑1 (MQ=255)                                                                                                                   aCCAGCCTGCGTGACCAGCGCCACGGCACCCGGCTGGTTGCCGCGCTCAGCTTCATCGCCCTGGCCGG‑TGTATTCCTCG‑GCTGGCCCTACTTCCATGAGTTCGACCAAGGCGTGATGACACTGGTc                                                      <  3:77232/126‑1 (MQ=255)                                                                                                                   aCCAGCCTGCGTGACCAGCGCCACGGCACCCGGCTGGTTGCCGCGCTCAGCTTCATCGCCCTGGCCGG‑TGTATTCCTCG‑GCTGGCCCTACTTCCATGAGTTCGACCAAGGCGTGATGACACTGGTc                                                      >  4:77232/1‑126 (MQ=255)                                                                                                                    ccAGCCTGCGTGACCAGCGCCACGGCACCCGGCTGGTTGCCGCGCTCAGCTTCATCGCCCTGGCCGG‑TGTATTCCTCG‑GCTGGCCCTACTTCCATGAGTTCGACCAAGGCGTGATGACACTGGTCCAGGAGCATCGCAGCCAGGCCATc                              <  5:126305/149‑1 (MQ=255)                                                                                                                     cAGCCTGCGTGACCAGCGCCACGGCACCCggctggtattgaggctcaggccgatcagcaccgcgagggcgccggctatgatcccggcgtccagccagaagccttccggcaggggcaggcgcatggcggcgccggtgg                                           <  3:278580‑M2/137‑109 (MQ=255)                                                                                                                     cAGCCTGCGTGACCAGCGCCACGGCACCCggctggtattgaggctcaggccgatcagcaccgcgagggcgccggctatgatcccggcgtccagccagaagccttccggcaggggcaggcgcatggcggcgccggtgg                                           >  4:278580‑M2/1‑29 (MQ=255)                                                                                                                       gCCTGCGTGACCAGCGCCACGGCACCCGGCTGGTTGCCGCGCTCAGCTTCATCGCCCTGGCCGG‑TGTATTCCTCG‑GCTGGCCCTACTTCCATGAGTTCGACCAAGGCGTGATGACACTGGTCCAGGAGCATCGCAGCCAGGCCATCGAc                           >  8:139737/1‑149 (MQ=255)                                                                                                                        ccTGCGTGACCAGCGCCACGGCACCCGGCTGGTTGCCGCGCTCAGCTTCATCGCCCTGGCCGG‑TGTATTCCTCG‑GCTGGCCCTACTTCCATGAGTTCGACCAAGGCGTGATGACACTGGTCCAGGAGCATCGCAGCCAGGCCATCGACg                          <  8:16227/149‑1 (MQ=255)                                                                                                                              tGACCAGCGCCACGGCACCCGGCTGGTTGCCGCGCTCAGCTTCATCGCCCTGGCCGG‑TGTATTCCTCG‑GCTGGCCCTACTTCCATGAGTTCGACCAAGGCGTGATGACACTGGTCCAGGAGCATCGCAGCCAGGCCATCGACGGCACCg                    <  4:111001/149‑1 (MQ=255)                                                                                                                                   aGCGCCACGGCACCCGGCTGGTTGCCGCGCTCAGCTTCATCGCCCTGGCCGG‑TGTATTCCTCG‑GCTGGCCCTACTTCCATGAGTTCGACCAAGGCGTGATGACACTGGTCCAGGAGCATCGCAGCCAGGCCATCGACGGCACCgtggtg               <  3:147632/149‑1 (MQ=255)                                                                                                                                       ccccGGCACCCGGCTGGTTGCCGCGCTCAGCTTCATCGCCCTGGCCGG‑TGTATTCCTCG‑GCTGGCCCTACTTCCATGAGTTCGACCAAGGCGTGATGACACTGGTCCAGGAGCATCGCAGCCAGGCCATCGACGGCACCGTGGTGCTg            <  4:1922/145‑1 (MQ=255)                                                                                                                                       ccACGGCACCCGGCTGGTTGCCGCGCTCAGCTTCATCGCCCTGGCCGG‑TGTATTCCTCG‑GCTGGCCCTACTTGCATGAGTTCGACCAAGGCCTGATGACACTGGTCCAGGAGCATCGCAGCCAGGCCATCGACGGCACCCTGGTGCTgt           >  3:1922/1‑148 (MQ=255)                                                                                                                                       ccACGGCACCCGGCTGGTTGCCGCGCTCAGCTTCATCGCCCTGGCCGG‑TGTATTCCTCG‑GCTGGCCCTACTTCCATGAGTTCGACCAAGGCGTGATGACACTGGTCCAGGAGCATCGCAGCCAGGCCATCGACGGCACCGTGGTGCTgg           <  3:91611/149‑1 (MQ=255)                                                                                                                                       ccACGGCACCCGGCTGGTTGCCGCGCTCAGCTTCATCGCCCTGGCCGG‑TGTATTCCTCG‑GCTGGCCCTACTTCCATGAGTTCGACCAAGGCGTGATGACACTGGTCCAGGAGCATCGCAGCCAGGCCATCGACGGCACCGTGGTGCTgg           <  1:144350/149‑1 (MQ=255)                                                                                                                                        cACGGCACCCGGCTGGTTGCCGCGCTCAGCTTCATCGCCCTGGCCGG‑TGTATTCCTCG‑GCTGGCCCTACTTCCATGAGTTCGACCAAGGCGTGATGACACTGGTCCAGGAGCATCGCAGCCAGGCCATCGACGGCACCGTGGTGCTGGt          >  8:122540/1‑149 (MQ=255)                                                                                                                                        cACGGCACCCGGCTGGTTGCCGCGCTCAGCTTCATCGCCCTGGCCGG‑TGTATTCCTCG‑GCTGGCCCTACTTCCATGAGTTCGACCAAGGCGTGATGACACTGGTCCAGGAGCATCGCAGCCAGGCCATCGACGGCACCGTGGTGCTGGt          <  8:270728/149‑1 (MQ=255)                                                                                                                                               cccGGCTGGTTGCCGCGCTCAGCTTCATCGCCCTGGCCGG‑TGTATTCCTCG‑GCTGGCCCTACTTCCATGAGTTCGACCAAGGCGTGATGACACTGGTCCAGGAGCATCGCAGCCAGGCCATCGACGGCACCGTGGTGCTGGTGACACgg   <  2:249078/149‑1 (MQ=255)                                                                                                                                                ccGGCTGGTTGCCGCGCTCAGCTTCATCGCCCTGGCCGG‑TGTATTCCTCG‑GCTGGCCCTACTTCCATGAGTTCGACCAAGGCGTGATGACACTGGTCCAGGAGCATCGCAGCCAGGCCATCGACGGCACCGTGGTGCTGGTGACACGGc  >  1:306567/1‑149 (MQ=255)                                                                                                                                                 |                                                                                                                                                      CTGCCCGGCTGGGCCACCGGCGCCGCCATGCGCCTGCCCCTGCCGGAAGGCTTCTGGCTGGACGCCGGGATCATAGCCGGCGCCCTCGCGGTGCTGATCGGCCTGAGCCTCAATACCAGCCTGCGTGACCAGCGCCACGGCACCCGGCTGGTTGCCGCGCTCAGCTTCATCGCCCTGGCCGG‑TGTATTCCTCG‑GCTGGCCCTACTTCCATGAGTTCGACCAAGGCGTGATGACACTGGTCCAGGAGCATCGCAGCCAGGCCATCGACGGCACCGTGGTGCTGGTGACACGGC  >  NC_002947/5476248‑5476539

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.