| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| JC | NC_002947 | 5,555,608 | +GCC | 100% | intergenic (‑84/+87) | PP_4887 ← / ← PP_4888 | hypothetical protein/methyl‑accepting chemotaxis transducer |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5555608 | 1 (0.020) | 36 (0.710) +GCC |
32/260 | NT | 97.4% | intergenic (‑84/+87) | PP_4887/PP_4888 | hypothetical protein/methyl‑accepting chemotaxis transducer |
| ? | NC_002947 | 5555609 = | 1 (0.020) | intergenic (‑85/+86) | PP_4887/PP_4888 | hypothetical protein/methyl‑accepting chemotaxis transducer | |||||
TGTCACTGTGCAGGAAATTCAGGTCGGCCTGGGCAGCGATTAGTCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCG‑‑‑CCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGCGCGCAGCTGAGCCGCCAGATCATCCAGCACCTTGC > NC_002947/5555464‑5555756 | tgtcactgtgcaggaaattcagatcgggctgggcagcgattagtcgggctgacatgagcaactccttttgtcatgtgtcgccgacagcatagcaacaccgctcaggtgtgggagcggccttgtgtcgcgaaagggccgcatagcggccc < 4:90153‑M2/1‑1 (MQ=255) actgtgcaggaaattcaggtcggcctgggcagcgattaggcgggcggacatgagcaactccttttgtcatgtgtcgccgacagcatagcaacaccgctcaggtgtgggagcggccttgtgtcgcgaaagggccgcatagcggccCCGGc < 7:239896‑M2/5‑1 (MQ=255) caggaaattcaggtcggcctgggcagcgattagtcgggcggacatgagcaactccttttgtcatgtgtcgccgacagcatagcaacaccgctcaggtgtgggagcggccttgtgtagcgaaagggccccaaagcggccCCGGCCattta > 8:253568‑M2/139‑148 (MQ=255) ggaaattcaggtcggcctgggcagcgattagtcgggcggacatgagcaactccttttgtcatgtgtcgccgacagcatagcaacaccgctcaggtgtgggagcggccttgtttcgcgaaagggccgcatagcggccCCGGCAATTTCcg > 8:5827‑M2/137‑149 (MQ=255) ggaaattcaggtcggcctgggcagcgattagtcgggcggacatgagcaactccttttgtcatgtgtcgccgacagcatagcaacaccgctcaggtgtgggagcggccttgtgtcgcgaaagggccgcatagcggccCCGGCAATTTCcg > 7:153091‑M2/137‑149 (MQ=255) aattcaggtcggcctgggcagcgattagtcgggcggacatgagcaactccttttgtcatgtgtcgccgacagcatagcaacaccgctcaggtgtgggagcggccttgtgtcgcgaaagggccgcatagcggccCCGGCAATTTCcgcg < 2:288106‑M2/15‑1 (MQ=255) aattcaggtcggcctgggcagcgattagtcgggcggacatgagcaactccttttgtcatgtgtcgccgacagcatagcaacaccgctcaggtgtgggagcggccttgtgtcgcgaaagggccgcatagcggccCCGGCAATTTCCGCgt < 8:153091‑M2/16‑1 (MQ=255) gtcggcctgggcagcgattagtcgggcggacatgagcaactccttttgtcatgtgtcgccgacaaggcatagcaacaccgctcaggtgggggagcgccattgtgtcgccaaagggccgcatagcggccCCGGCAATTTCCGGGTGTAt > 1:260575‑M2/129‑148 (MQ=255) cctgggcagcgattagtcgggcggacatgagcaactccttttgtcatgtgtcgccgacagcatagcaacaccgctcaggtgtgggagcggccttgtgtcgcgaaagggccgcatagcggccCCGGCAATTTCCGCGTGTATGCAACaaa > 7:7399‑M2/122‑149 (MQ=255) tgggctgcgatttgggggggggacaggagcaactccttttgtcatgtgtcgccgacagcatagcaacaccgctcaggtgtgggagcggcgttgtgtcgcgaaagggccgcatagcggccCCGGCAATTTCCGCGTGTATGc < 6:34210‑M2/22‑1 (MQ=255) tgggcagcgattagtcgggcggacatgagcaactccttttgtcatgtgtcgccgacagcatagcaacaccgctcaggtgtgggagcggccttgtgtcgcgaaagggccgcatagcggccCCGGCAATTTCCGCGTGTATGc > 5:34210‑M2/120‑141 (MQ=255) gcagcgattagtcgggcggacatgagcaactccttttgtcatgtgtcgccgacagcatagcaacaccgctcaggtgtgggagcggccttgtttcgcgaaagggccgcatagcggccCCGGCAATTTCCGCGTGTATGCAACAAACCTgg < 7:5827‑M2/33‑1 (MQ=255) cagcgattagtcgggcggacatgagcaactccttttgtcatgtgtcgccgacagcatagcaacaccgctcaggtgtgggagcggccttgtgtcgcgaaagggccgcatagcggccCCGGCAATTTCCGCGTGTATGCAACAAACCTggg > 5:330138‑M2/116‑149 (MQ=255) agcgattagtcgggcggacatgagcaactccttttgtcatgtgtcgccgacagcatagcaacaccgctcaggtgtgggagcggccttgtgtcgcgaaagggccgcatagcggccCCGGCAATTTCCGCGTGTATGCAACAAACCTgggg < 8:7399‑M2/35‑1 (MQ=255) gattagtcgggcggacatgagcaactccttttgtcatgtgtcgccgacagcatagcaacaccgctcaggtgtgggagcggccttgtgtcgcgaaagggccgcatagcggccCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGgctg < 1:12838‑M2/38‑1 (MQ=255) agtcgggcggacatgagcaactccttttgtcatgtgtcgccgacagcatagcaacaccgctcaggtgtgggagcggccttgtgtcgcgaaagggccgcatagcggccCCGGCAATTTcc < 2:116227‑M2/12‑1 (MQ=255) agtcgggcggacatgagcaactccttttgtcatgtgtcgccgacagcatagcaacaccgctcaggtgtgggagcggccttgtgtcgcgaaagggccgcatagcggccCCGGCAATTTcc > 1:116227‑M2/108‑119 (MQ=255) gggcggacatgagcaactccttttgtcatgtgtcgccgacagcatagcaacaccgctcaggtgtgggagcggccttgtgtcgcgaaagggccgcatagcggccCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAg < 4:50012‑M2/46‑1 (MQ=255) ggcggacatgagcaactccttttgtcatgtgtcgccgacagcatagcaacaccgctcaggtgtgggagcggccttgtgtcgcgaaagggccgcatagcggccCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGc < 2:25400‑M2/47‑1 (MQ=255) gcaactccttttgtcatgtgtcgccgacagcatagcaacaccgctcaggtgtgggagcggccttgtgtcgcgaaagggccgcatagcggccCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGa < 6:330138‑M2/57‑1 (MQ=255) ctccttttgtcatgtgtcgccgacagcatagcaacaccgctcaggtgtgggagcggccttgtttcgcgaaagggccgcatagcggccCCGGGAATTTCCGCCTGTATGGAACAAACCAGGGGCTGCGATGCAGCCCGTTGGCGccac > 1:34000‑M2/88‑147 (MQ=255) cttttgtcatgtgtcgccgacagcatagcaacaccgctcaggtgtgggagcggccttgtgtcgcgaaagggccgcatagcggccCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAg < 2:260575‑M2/63‑1 (MQ=255) gtgtcgccgacagcatagcaacaccgctcaggtgtgggagcggccttgtgtcgcgaaagggccgcatagcggccCCGGCAATTTCCGCgt < 8:32704‑M2/16‑1 (MQ=255) gtgtcgccgacagcatagcaacaccgctcaggtgtgggagcggccttgtgtcgcgaaagggccgcatagcggccCCGGCAATTTCCGCgt > 7:32704‑M2/75‑90 (MQ=255) cgctcaggtgtgggagcggccatgtgtcgcgaaagggccgcatagcggccCCGGCAATTTCCGCGTGTATGGAACAAACCTGTGGATGCTATGCAGCCCTTTCGCGCCACCAGGCCCACAAAGGACCGCGCAGGCGGCAGGCCCggacc > 8:289804‑M2/51‑147 (MQ=255) aggtgtgggagcggccttgtgtcgcgaaagggccgcatagcggccCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGc < 7:179509‑M2/103‑1 (MQ=255) aGGTGTGGGAGCGGCCTTGTTTAGCCCAAGGGCCGCAAAGCGGCCCCCGCCATTTTCCCGGGTATTCAAAAAACCATGGGCTGCTATGCAGCCCGTTAGCGACACAACGCCCACAAAAGACCCCCCAGGCGTAAAGCCCCGGACAGGcc > 8:179509/1‑149 (MQ=255) ggtgtgggagcggccttgtgtcgcgaaagggccgcatagcggccCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGccc < 5:169562‑M2/105‑1 (MQ=255) ttgtgtcgcgaaagggccgcatagcggccCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGCGCGCAGc > 5:6955‑M2/30‑149 (MQ=255) gtgtcgcgaaagggccgcatagcggccCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCCGGCTGGCGCGCAGCTg > 3:228721‑M2/28‑149 (MQ=255) tgtcgcgaaagggccgcatagcggccCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGCGCGCAGCTGa < 7:125557‑M2/123‑1 (MQ=255) tcgcgaaagggccgcatagcggccCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGCGCGCAGCTGAgc > 3:115274‑M2/25‑149 (MQ=255) gcgaaagggccgcatagcggccCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGCGCGCAGCTGAgccg > 1:59758‑M2/23‑149 (MQ=255) cgaaagggccgcctagcggccCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGCGCGCAGCTGAgccgc < 4:115274‑M2/128‑1 (MQ=255) ccggggccgctatgcggccCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGCGCGCAGCTGAgccgcc > 8:167293‑M2/20‑148 (MQ=255) cggggccgctatgcggccCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCCGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGCGCGCAGCTGAgccgc > 5:156045‑M2/19‑146 (MQ=255) gggccgcatagcggccCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGCGCGCAGCTGAGCCGCCAGat < 7:253568‑M2/133‑1 (MQ=255) ccgcatagcggccCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGCGCGCAGCTGAGCCGCCAGatcat > 4:23127‑M2/14‑149 (MQ=255) ctcatagcggccCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGCGCGCAGCTGAGCCGCCAGatcatc < 7:250939‑M2/137‑1 (MQ=255) gccCCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGCGCGCAGCTGAGCCGCCAGATCATCCCGCACCtt > 7:154960‑M2/4‑149 (MQ=255) ccGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGCGCGCAGCTGAGCCGCCAg > 2:100069/1‑131 (MQ=255) ccGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGCGCGCAGCTGAGCCGCCAGATCATCCAGCACCTTGc > 8:212408/1‑148 (MQ=255) | TGTCACTGTGCAGGAAATTCAGGTCGGCCTGGGCAGCGATTAGTCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAGCG‑‑‑CCGGCAATTTCCGCGTGTATGCAACAAACCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGCGCGCAGCTGAGCCGCCAGATCATCCAGCACCTTGC > NC_002947/5555464‑5555756 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |