New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5786495	47 (0.900)	3 (0.070)	3/218	NT	6.4%	intergenic (+38/‑93)	PP_5068/trxC	hypothetical protein/thioredoxin
	?	NC_002947	= 5786532	49 (1.150)					intergenic (+75/‑56)	PP_5068/trxC	hypothetical protein/thioredoxin

AGCCCGGGATGCAAGCCTACGCCGAGCGACCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCT‑GTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACC‑CAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCACTGCAACGGCCTCAACCGCCTGCCCGCCGAGCGCCTGGGCGATGCGCCGAAATGCGGTCGC  >  NC_002947/5786384‑5786680                                                                                                                                                      |                                                                                                                                                      aGCCCGGGATGCAAGCCTACGCCGAGCGACCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCT‑GTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCGAAGCCGgtg                                                                                                                                                       <  8:97203/149‑1 (MQ=255)   cccGGGATGCAAGCCTACGCCGAGCGACCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCT‑GTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGtt                                                                                                                                                     <  7:44348‑M2/149‑3 (MQ=255)     cGGGATGCAAGCCTACGCCGAGCGACCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCT‑GTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCGAAGCCGgtgcaat                                                                                                                                                   <  2:81389/149‑5 (MQ=255)        gATGCAAGCCTACGCCGAGCGACCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCT‑GTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGttcgcgg                                                                                                                                                <  2:96674‑M2/149‑8 (MQ=255)        gATGCAAGCCTACGCCGAGCGACCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCT‑GTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGttcgcgg                                                                                                                                                >  8:239263‑M2/1‑142 (MQ=255)         aTGCAAGCCTACGCCGAGCGACCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCT‑GTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGttcgcggg                                                                                                                                               <  8:63367‑M2/149‑9 (MQ=255)          tGCAAGCCTACGCCGAGCGACCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCT‑GTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGttcgcgggc                                                                                                                                              >  7:287560‑M2/1‑140 (MQ=255)                      ccGAGCGACCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCT‑GTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGttcgcgggcacgcccgctccc                                                                                                                                  >  1:312225‑M2/1‑128 (MQ=255)                        gAGCGACCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCT‑GTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGttcgcgggcacgcccgctccca                                                                                                                                 <  6:246302‑M2/148‑23 (MQ=255)                          gCGACCGCCGGAGGGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCT‑GGGGGAGCGGGCGTGCCCGCTAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACaa                                                                                                                              <  8:202140/149‑1 (MQ=255)                                 ccgGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCT‑GTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGaaatc                                                                                                                       >  4:300369/1‑147 (MQ=255)                                  cgGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCT‑GTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCg                                                                                                                      >  6:140618/1‑149 (MQ=255)                                   ggAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCT‑GTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGt                                                                                                                     <  8:44348/149‑1 (MQ=255)                                   ggAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCT‑GTAGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGt                                                                                                                     <  1:52442/149‑1 (MQ=255)                                        ggggCAAGCACGTGTAAATCAGCTGCTATTCCTGATTTGCGCCGAATCCT‑GTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGTATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAAc                                                                                                                 <  7:264970/148‑1 (MQ=25)                                         gggCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCT‑GTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAAcc                                                                                                                >  2:47595/1‑148 (MQ=255)                                         gggCAAGAACCTGGAAATCAGCTGCTCTTCCTGATAAGCGCCGAAACCA‑CTGGGAGCGACCCTCCACCCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCCGTGTTCGCCGGCACGCCCCCTCCCACAACGAAACCGTGAAcc                                                                                                                >  2:52246/1‑148 (MQ=255)                                           gCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTAGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAAcc‑c                                                                                                              >  1:234589/1‑148 (MQ=255)                                                cACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCT‑GTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACC‑CAACACCg                                                                                                       <  4:289366/149‑1 (MQ=255)                                                 aCCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCT‑GTGGGAGCGGGCGTGCCCGCGAAGCAGCCAACGTGAAGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCCCTACCCCAACGAAACCGAGAACC‑CAACAccc                                                                                                       >  8:192097/1‑147 (MQ=37)                                                  ccTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCT‑GTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACC‑CAACACCGga                                                                                                     <  8:240345/149‑1 (MQ=255)                                                  ccTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCT‑GTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACC‑CAACACCGga                                                                                                     <  8:209361/149‑1 (MQ=255)                                                    tGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCT‑GTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACC‑CCACACCGgag                                                                                                    >  3:182660/1‑148 (MQ=255)                                                    tGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCT‑GTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACC‑CAACACCg                                                                                                       >  7:288338/1‑145 (MQ=255)                                                      gAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCT‑GTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACC‑CAACACCGgaga                                                                                                   <  5:246302/147‑1 (MQ=255)                                                      gAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCT‑GTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACC‑CAACACCGGAGAt                                                                                                  <  6:294866/148‑1 (MQ=255)                                                                  tctTCCTGATTAGCGCCGAATCAT‑GTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACCCCCGCTCCCACAAGGAAACCGAGAACC‑CAACACCGGAGATGAAATgaccgacc                                                                                     >  5:268273/1‑149 (MQ=255)                                                                      ccTGATTAGCGCCGAATCCT‑GTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAATCGTGAACC‑CAACACCGGAGATGAAATGACCGACCCa                                                                                   <  3:300369/147‑1 (MQ=255)                                                                        tGATTCGCGCCGAATCCT‑GTGGGCGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCCCCGGCTTCGCGGGTGTTCGCGGGCACGCCCGCTCCCACaa                                                                                                                              <  1:322394/103‑1 (MQ=21)                                                                        tGATTAGCGCCGAATCCT‑GTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACC‑CAACACCGGAGATGAAATGACCGACCCACTgg                                                                               >  5:205513/1‑149 (MQ=255)                                                                        tGATTAGCGCCGAATCCT‑GTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACC‑CAACACCGGAGATGAAATGACCGACCCACTgg                                                                               >  3:29900/1‑149 (MQ=255)                                                                             aGCGCCGAATCCT‑GTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGGACC‑CCACACCGGAGATGAAATGACCGACCCACTGGTAATc                                                                          >  3:271730/1‑149 (MQ=255)                                                                                 ccGAATCCT‑GTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACC‑CAACACCGGAGATGAAAt                                                                                             >  4:275338/1‑126 (MQ=255)                                                                                 ccGAATCCT‑GTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACC‑CAACACCGGAGATGAAAt                                                                                             <  3:275338/126‑1 (MQ=255)                                                                                        cT‑GTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACC‑CAACCCCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCa                                                               <  2:108273/149‑1 (MQ=255)                                                                                            tgGGAGCGTGCGTGCCCTCGAAGCAGTAAACGTGATGGATTTCACCGGATTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACC‑CAACACCGGAGATGAAATGACAGACCCACTTGTAATCCCCTGCCCCCACt                                                             <  6:125398/148‑1 (MQ=38)                                                                                            tgGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACC‑CAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCACt                                                             <  1:37911/148‑1 (MQ=255)                                                                                            tgGGAGCGGGCGTGCCCGCGAAGCAGGAAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACC‑CAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCAc                                                              <  5:182823/147‑1 (MQ=255)                                                                                                     gCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGttcgcgggcacgcccgctcccacaggattcggcgctaatcaggaagagcagctgatttccaggtgcttgccccactccggcggtcgctcggcgtaggct                                                    <  3:278401‑M2/149‑100 (MQ=255)                                                                                                      cGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGttcgcgggcacgcccgctcccacaggattcggcgctaatcaggaagagcagctgatttccaggtgcttgccccactccggcggtcgctcggcgtaggctt                                                   >  4:278401‑M2/1‑49 (MQ=255)                                                                                                           ccGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACC‑CAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCACTGCACCGGCCTCAACCg                                             >  3:91469/1‑149 (MQ=255)                                                                                                            cgcgAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGttcgcgggcacgcccgctcccacaggattcggcgctaatcaggaagagcagctgatttccaggtgcttgccccactccggcggtcgctcggcgtaggcttgcatcc                                             <  1:227455‑M2/149‑107 (MQ=255)                                                                                                            cgcgAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACC‑CAACTCCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCACTGCAACGGCCTCAACCGc                                            <  1:96674/149‑1 (MQ=255)                                                                                                              cgAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACC‑CAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCACTGCAACGGCCTCAACCGCCt                                          <  5:140618/149‑1 (MQ=255)                                                                                                                aaGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACC‑CAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCACTGCAACGGCCTCAACCGCCTGc                                        <  7:192097/149‑1 (MQ=255)                                                                                                                   cAGGCATCGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACC‑CAACACCGGAGATGAAATGAGCGACCCACTGGTAATCCCCTGCCCCCACTGCAACGGCCTCAACCGCCTGCccg                                     <  1:52246/149‑1 (MQ=255)                                                                                                                       cAACGTGATGGATTGCACCGGCGTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACC‑CAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCACTGCAACGGCCTCAACCGCCTGCCCGCCGa                                 <  8:182362/149‑1 (MQ=255)                                                                                                                             gATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACC‑CAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCACTGCAACGGCCTCAACCGCCTGCCCGCCGAgc                               >  8:82267/1‑145 (MQ=255)                                                                                                                             gATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACC‑CAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCACTGCAACGGCCTCAACCGCCTGCCCGCCGAgc                               <  7:82267/145‑1 (MQ=255)                                                                                                                             gATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACC‑CAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCACTGCAACGGCCTCAACCGCCTGCCCGCCGAGCGCCt                           >  5:88433/1‑149 (MQ=255)                                                                                                                             gATGGATTGCACCGGCTTCGCCGGTGTTCGCGAGCACGCCCGCTCCCACAAGGAAACCGTGAACC‑CAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCACTGCAACGGCCTCAACCGCCTGCCCGCCGAGCGCCt                           >  4:184404/1‑149 (MQ=255)                                                                                                                              aTGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACC‑CAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCACTGCAACGGCCTCAACCGCCTGCCCGCCGAGCGCCTg                          >  7:255312/1‑149 (MQ=255)                                                                                                                              aTGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACC‑CAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCACTGCAACGGCCTCAACCGCCTGCCCGCCGAGCGCCTg                          >  5:301549/1‑149 (MQ=255)                                                                                                                                gcaTTGCACCGGCTTCGCCGGGGTCGGCGGGAACGCCCGCTCCCACAAGGAAACCGTGAACC‑CAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCACTGCAACGGCCTCAACCGCCTGCCCGCCGAGCGCCTgg                         <  2:234589/146‑1 (MQ=255)                                                                                                                                   ttGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACCAAAACACCGGGGATGAAATGCCCGCCCCCCTGGTATTCCCGTGCCCCCCAGGCACCGGCGGAAACGGCCTGCCCGCCGCGGGCCTggggg                      >  1:93970/1‑147 (MQ=19)                                                                                                                                    tGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACC‑CAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCACTGCAACGGCCTCAACCGCCTGCCCGCCGAGCGCCTGGGCGAt                    >  1:304752/1‑149 (MQ=255)                                                                                                                                      cACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACC‑CAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCACTGCAACGGCCTCAACCGCCTGCCCGCCGAGCGCCTGGGCGATg                   <  8:288338/148‑1 (MQ=255)                                                                                                                                       aCCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACC‑CAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCACTGCAACGGCCTCAACCGCCTGCCCGCCGAGCGCCTGGGCGATgcg                 >  8:243924/1‑149 (MQ=255)                                                                                                                                       aCCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACC‑CAACACCGGAGATGAAATGACCGACCCACTGGT‑ATCCCCTGCCCCCACTGCAACGGCCTCAACCGCCTGCCCGCCGAGCGCCTGGGCGATgcgc                >  4:144363/1‑149 (MQ=255)                                                                                                                                           gCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACC‑CAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCACTGCAACGGCCTCAACCGCCTGCCCGCCGAGCGCCTGGGCGATGCGCCg              >  7:239943/1‑148 (MQ=255)                                                                                                                                               cGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGACCC‑CAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCACTGCAACGGCCTCAACCGCCTGCCCGCCGAGCGCCTGGGCGATGCGCCGaaa           <  7:63367/147‑1 (MQ=255)                                                                                                                                                gCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACC‑CAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCACTGCAACGGCCTCAACCGCCTGCCCGCCGAGCGCCTGGGCGATGCGCCGAAATGc        >  4:120661/1‑149 (MQ=255)                                                                                                                                                gCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACC‑CAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCACTGCAACGGCCTCAACCGCCTGCCCGCCGAGCGCCTGGGCGATGCGCCGAAATGc        <  1:47595/149‑1 (MQ=255)                                                                                                                                                     tgtTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACC‑CAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCACTGCAACGGCCTCAACCGCCTGCCCGCCGAGCGCCTGGGCGa                     <  4:178455/131‑1 (MQ=255)                                                                                                                                                     tgtTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACC‑CAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCACTGCAACGGCCTCAACCGCCTGCCCGCCGAGCGCCTGGGCGa                     >  3:178455/1‑131 (MQ=255)                                                                                                                                                      gtTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACC‑CAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCACTGCAACGGCCTCAACCGCCTGCCCGCCGAGCGCCTGGGCGATGCACCGAAATGCGGTCGc  >  7:31577/1‑149 (MQ=255)                                                                                                                                                      |                                                                                                                                                      AGCCCGGGATGCAAGCCTACGCCGAGCGACCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCT‑GTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACC‑CAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCACTGCAACGGCCTCAACCGCCTGCCCGCCGAGCGCCTGGGCGATGCGCCGAAATGCGGTCGC  >  NC_002947/5786384‑5786680

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.