New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 5868966 =67 (1.290)3 (0.060) 3/258 NT 4.6% coding (397/783 nt) PP_5143 membrane protein
?NC_002947 5869013 = 59 (1.170)coding (350/783 nt) PP_5143 membrane protein
Rejected: Frequency below/above cutoff threshold.

GGTGAGGAACGGCACCGTCAGCGAACCACCGCCAATGCCGAAAATGGCCGAGGCCCAGCCAATCACGCCACCTGCACCGATCAGCCCAGGTTTGCCGGGGACGCCACGGCTGGCCTTGGGTTTGAGGTCAAGGGCCATCTGCGCGGCGATGACCAGGGCGAACACACCGATGATCTTTTGCAGCAGTGGCCCCTGGATCAGCGAAGCGGTCTTGGCACCGACACCGGCCCCCAGGAGGATGCCGATGGTCATCCAGATGAAGATCGGCCATTGCACCGCGCGCTTGCGGTGGT  >  NC_002947/5868865‑5869157
                                                                                                                                                    |                                                                                                                                                
accatcggcatcctcctgggggccggtgtcggtgccaagaccgcttcgctgatccaggggccactgctgcaaaagatcatcggtgtgttcgccctggtcatCGCCACGGCTGGCCTTGGGTTTGAGGTCAAGGGCCATCTGCGCGGCGa                                                                                                                                                  >  6:89557‑M1/102‑149 (MQ=255)
 gTGAGGAACGGCACCGTCAGCGAACCACCGCCAATGCCGAAAATGGCCGAGGCCCAGCCAATCACGCCACCTGCACCGATCAGCCCAGGTTTGCCGGGGACGCCACGGCTGGCCTTGGGTTTGAGGTCAAGGGCCATCTGCGCGGCGAt                                                                                                                                                 <  7:267145/149‑1 (MQ=255)
   atcggcatcctcctgggggccggtgtcggtgccaagaccgcttcgctgatccaggggccactgctgcaaaagatcatcggtgtgttcgccctggtcatCGCCACGGCTGGCCTTGGGTTTGAGGTCAAGGGCCATCTGCGCGGCGATg                                                                                                                                                >  6:317183‑M1/99‑148 (MQ=255)
   atcggcatcctcctgggggccggtgtcggtgccaagaccgcttcgctgatccaggggccactgctgcaaaagatcatcggtgtgttcgccctggtcatCGCCACGGCTGGCCTTGGGTTTGAGGTCAAGGGCCATCTGCGCGGCGATg                                                                                                                                                <  5:317183‑M1/50‑1 (MQ=255)
         cGGCACCGTCAGCGAACCACCGCCAATGCCGAAAATGGCCGAGGCCCAGCCAATCACGCCACCTGCACCGATCAGCCCAGGTTTGCCGGGGACGCCACGGCTGGCCTTGGGTTTGAGGTCAAGGGCCATCTGCGCGGCGATGACCAggg                                                                                                                                         <  3:220506/149‑1 (MQ=255)
           gCACCGTCAGCGAACCACCGCCAATGCCGAAAATGGCCGAGGCCCAGCCAATCACGCCACCTGCACCGATCAGCCCAGGTTTGCCGGGGACGCCACGGCTGGCCTTGGGTTTGAGGTCAAGGGCCATCTGCGCGGCGATGACCAGGGc                                                                                                                                        >  4:87044/1‑148 (MQ=255)
             aCCGTCAGCGAACCACCGCCAATGCCGAAAATGGCCGAGGCCCAGCCAATCACGCCACCTGCACCGATCAGCCCAGGTTTGCCGGGGACGCCACGGCTGGCCTTGGGTTTGAGGTCAAGGGCCATCTGCGCGGCGATGACCAGGGCGaa                                                                                                                                     <  8:300519/149‑1 (MQ=255)
             aCCGTCAGCGAACCACCGCCAATGCCGAAAATGGCCGAGGCCCAGCCAATCACGCCACCTGCACCGATCAGCCCAGGTTTGCCGGGGACGCCACGGCTGGCCTTGGGTTTGAGGTCAAGGGCCATCTGCGCGGCGATGACCAGGGCGaa                                                                                                                                     <  8:144281/149‑1 (MQ=255)
                 tCAGCGAACCACCGCCAATGCCGAAAATGGCCGAGGCCCAGCCAATCACGCCACCTGCACCGATCAGCCCAGGTTTGCCGGGGACGCCACGGCTGGCCTTGGGTTTGAGGTCAAGGGCCATCTGCGCGGCGATGACCAGGGCGAacaca                                                                                                                                 >  2:202818/1‑149 (MQ=255)
                    gCGAACCACCGCCAATGCCGAAAATGGCCGAGGCCCAGCCAATCACGCCACCTGCACCGATCAGCCCAGGTTTGCCGGGGACGCCACGGCTGGCCTTGGGTTTGAGGTCAAGGGCCATCTGCGCGGCGATGACCAGGGCGAACACAcc                                                                                                                               >  8:84252/1‑148 (MQ=255)
                       aaCCACCGCCAATGCCGAAAATGGCCGAGGCCCAGCCAATCACGCCACCTGCACCGATCAGCCCAGGTTTGCCGGGGACGCCACGGCTGGCCTTGGGTTTGAGGTCAAGGGCCATCTGCGCGGCGATGACCAGGGCGAACACACCgatg                                                                                                                           <  7:118669/149‑1 (MQ=255)
                        agcaccGCCAATGCCGAAAATGGCCGAGGCCCAGCCAATCACGCCACCTGCACCGATCAGCCCAGGTTTGCCGGGGACGCCACGGCTGGCCTTGGGTTTGAGGTCAAGGGCCATCTGCGCGGCGATGACCAGGGCGAACCCACCgatga                                                                                                                          >  8:162982/3‑149 (MQ=255)
                         ccaccGCCAATGCCGAAAATGGCCGAGGCCCAGCCAATCACGCCACCTGCACCGATCAGCCCAGGTTTGCCGGGGACGCCACGGCTGGCCTTGGGTTTGAGGTCAAGGGCCATCTGCGCGGCGATGACCAGGGCGAACACACCgatgat                                                                                                                         >  5:27124/1‑149 (MQ=255)
                          caccGCCAATGCCGAAAATGGCCGAGGCCCAGCCAATCACGCCACCTGCACCGATCAGCCCAGGTTTGCCGGGGACGCCACGGCTGGCCTTGGGTTTGAGGTCAAGGGCCATCTGCGCGGCGATGACCAGGGCGAACACACCGATGATc                                                                                                                        <  5:113011/149‑1 (MQ=255)
                            ccGCCAATGCCGAAAATGGCCGAGGCCCAGCCAATCACGCCACCTGCACCGATCAGGCCAGGTTTGCCGGGGACGCCACGGCTGGCCTTGGGTTTGAGGTCAAGGGCCATCTGCGCGGCGATGACCAGGGCGAACACACCGATGATCtt                                                                                                                      >  1:301605/1‑149 (MQ=255)
                            ccGCCAATGCCGAAAATGGCCGAGGCCCAGCCAATCACGCCACCTGCACCGATCAGCCCAGGATTGCCGGGGACGCCACGGCTGGCCTTGGGTTTGAGGTCAAGGGCCATCTGCGCGGCGATGACCAGGGCGAACACACCGATGATCtt                                                                                                                      >  8:47724/1‑149 (MQ=255)
                              gCCAATGCCGAAAATGGCCGAGGCCCAGCCAATCACGCCACCTGCACCGATCAGCCCAGGTTTGCCGGGGACGCCACGGCTGGTTTTGGGTTTGAGGTCAAGGGCCATCTGCGCGGCGATGACCAGGGCGAACACACCGATGATCtttt                                                                                                                    <  1:260049/149‑1 (MQ=255)
                              gCCAATGCCGAAAATGGCCGAGGCCCAGCCAATCACGCCACCTGCACCGATCAGCCCAGGTTTGCCGGGGACGCCACGGCTGGCCTTGGGTTTGAGGTCAAGGGCCATCTGCGCGGCGATGACCAGGGCGAACACACCGATGATCtttt                                                                                                                    <  5:218388/149‑1 (MQ=255)
                              gCCAATGCCGAAAATGGCCGAGGCCCAGCCAATCACGCCACCTGCACAGATCAGCCCAGGTTTGCCGGGGACGCCACGGCTGGCCTTGGGTTTGAGGTCAAGGGCCATCTGCGCGGCGATGACCAGGGCGAACACCCCGATGATCtttt                                                                                                                    >  3:19671/1‑149 (MQ=255)
                               ccAATGCCGAAAATGGCCGAGGCCCAGCCAATCACGCCACCTGCACCGATCAGCCCAGGTTTGCCGGGGACGCCACGGCTGGCCTTGGGTTTGAGGTCAAGGGCCATCTGCGCGGCGATGACCAGGGCGAACACACCGATGATCTTTTg                                                                                                                   <  8:30330/149‑1 (MQ=255)
                               ccAATGCCGAAAATGGCCGAGGCCCAGCCAATCACGCCACCTGCACCGATCAGCCCAGGTTTGCCGGGGACGCCACGGCTGGCCTTGGGTTTGAGGTCAAGGGCCATCTGCGCGGCGATGACCAGGGCGAACACACCGATGATCTTTTg                                                                                                                   <  7:84252/149‑1 (MQ=255)
                                cAATGCCGAAAATGGCCGAGGCCCAGCCAATCACGCCACCTGCACCGATCAGCCCAGGTTTGCCGGGGACGCCACGGCTGGCCTTGGGTTTGAGGTCAAGGGCCATCTGCGCGGCGATGACCAGGGCGAACACACCGATGATCTTTTg                                                                                                                   >  3:46150/1‑148 (MQ=255)
                                 aaTGGCGAAAATGGCCGAGGCCCAGCCAATCACGCCACCTGCACCGATCAGCCCAGGTTTGCCTGGGACGCCACGGCTGGCCTTGGGTTTGAGGTCAAGGGCCATCTGCGCGGCGATGACCAGGGCGAACACACCGATGATCTTTTgca                                                                                                                 <  5:292287/149‑1 (MQ=255)
                                     ccGAAAATGGCCGAGGCCCAGCCAATCACGCCACCTGCACCGATCAGCCCAGGTTTGCCGGGGACGCCACGGCTGGCCTTGGGTTTGAGGTCAAGGGCCATCTGCGCGGCGATGACCAGGGCGAACACACCGATGATCTTTTGcagcag                                                                                                             >  5:40947/1‑149 (MQ=255)
                                       gAAAATGGCCGAGGCCCAGCCAATCACGCCACCTGCACCGATCAGCCCAGGTTTGCCGGGGACGCCACGGCTGGCCTTGGGTTTGAGGTCAAGGGCCATCTGCGCGGCGATGACCAGGGCGAACACACCGATGATCTTTTGCAGCAGTg                                                                                                           >  1:308332/1‑149 (MQ=255)
                                       gAAAATGGCCGAGGCCCAGCCAATCACGCCACCTGCACCGATCAGCCCAGGTTTGCCGGGGACGCCACGGCTGGCCTTGGGTTTGAGGTCAAGGGCCATCTGCGCGGCGATGACCAGGGCGAACACACCGATGATCTTTTGCAGAAGTg                                                                                                           >  3:204063/1‑149 (MQ=255)
                                                 gAGGCCCAGCCAATCACGCCACCTGCACCGATCAGCCCAGGTTTGCCGGGGACGCCACGGCTGGCCTTGGGTTTGAGGTCAAGGGCCATCTGCGCGGCGATGACCAGGGCGAACACACCGATGATCTTTTGCAGCAGTGGCCCCTGGAt                                                                                                 >  5:297422/1‑149 (MQ=255)
                                                      ccAGCCAATCACGCCACCTGCACCGATCAGCCCAGGTTTGCCGGGGACGCCACGGCTGGCCTTGGGTTTGAGGTCAAGGGCCATCTGCGCGGCGATGACCAGGGCGAACACACCgatgat                                                                                                                         <  6:62645/120‑1 (MQ=255)
                                                      ccAGCCAATCACGCCACCTGCACCGATCAGCCCAGGTTTGCCGGGGACGCCACGGCTGGCCTTGGGTTTGAGGTCAAGGGCCATCTGCGCGGCGATGACCAGGGCGAACACACCgatgat                                                                                                                         >  5:62645/1‑120 (MQ=255)
                                                      ccAGCCAATCACGCCACCTGCACCGATCAGCCCAGGTTTGCCGGGGACGCCACGGCTGGCCTTGGGTTTGAGGTCAAGGGCCATCTGCGCGGCGATGACCAGGGCGAACACACCgatgat                                                                                                                         >  5:67294/1‑120 (MQ=255)
                                                      ccAGCCAATCACGCCACCTGCACCGATCAGCCCAGGTTTGCCGGGGACGCCACGGCTGGCCTTGGGTTTGAGGTCAAGGGCCATCTGCGCGGCGATGACCAGGGCGAACACACCgatgat                                                                                                                         <  6:67294/120‑1 (MQ=255)
                                                      ccAGCCAATCACGCCACCTGCACCGATCAGCCCAGGTTTGCCGGGGACGCCACGGCTGGCCTTGGGTTTGAGGTCAAGGGCCATCTGCGCGGCGATGACCAGGGCGAACACACCGATGATCTTTTGCAGCAGTGGCCCCTGGATCAGCg                                                                                            <  6:197674/149‑1 (MQ=255)
                                                      ccAGCCAATCACGCCACCTGCACCGATCAGCCCAGGTTTGCCGGGGACGCCACGGCTGGCCTTGGGGTTGAGGTCAAGGGCCATCTGCGCGGCGATGACCAGGGCGAACACACCGATGATCTTTTGCAGCAGTGGCCCCTGGATCAGc                                                                                             >  3:9753/1‑148 (MQ=255)
                                                       cAGCCAATCACGCCACCTGCACCGATCAGCCCGGGTTTGCCGGGGACGCCCCGGCTGGCCTTGGGTTTGAGGTCAAGGGCCATCTGCGCGGCGATGACCAGGGCGAACACACCGATGATCTTTTGCAGCAGTGGCCCCTGGATCAGCg                                                                                            >  7:61377/1‑148 (MQ=255)
                                                        aGCCAATCACGCCACCTGCACCGATCAGCCCAGGTTTGCCGGGGACGCCACGGCTGGCCTTGGGTTTGAGGTCAAGGGCCATCTGCGCGGCGATGAcc                                                                                                                                             >  1:210266/1‑98 (MQ=255)
                                                        aGCCAATCACGCCACCTGCACCGATCAGCCCAGGTTTGCCGGGGACGCCACGGCTGGCCTTGGGTTTGAGGTCAAGGGCCATCTGCGCGGCGATGAcc                                                                                                                                             <  2:210266/98‑1 (MQ=255)
                                                        aGCCAATCACGCCACCTGCACCGATCAGCCCAGGTTTGCCGGGGACGCCACGGCTGGCCTTGGGTTTGAGGTCAAGGGCCATCTGCGCGGCGATGACCAGGGCGAACACACCGATGATCTTTTGCAGCAGTGGCCCCTGGATCAGCGaa                                                                                          <  1:202818/149‑1 (MQ=255)
                                                             aTCACGCCACCTGCACCGATCAGCCCAGGTTTGCCGGGGACGCCACGGCTGGCCTTGGGTTTGAGGTCAAGGGCCATCTGCGCGGCGATGACCAGGGCGAACACACCGATGATCTTTTGCAGCAGTGGCCCCTGGATCAGCGAAGCgg                                                                                      >  2:1268/1‑148 (MQ=255)
                                                                aCGCCACCTGCACCGATCAGCCCAGGTTTGCCGGGGACGCCACGGCTGGCCTTGGGTTTGAGGTCAAGGGCCATCTGCGCGGCGATGACCAGGGCGAACACACCGATGATCTTTTGCAGCAGTGGCCCCTGGATCAGCGAAGCGGTCtt                                                                                  <  3:87044/149‑1 (MQ=255)
                                                                  gCCACCTGCACCGATCAGCCCAGGTTTGCCGGGGACGCCACGGCTGGCCTTGGGTTTGAGGTCAAGGGCCATCTGCGCGGCGATGACCAGGGCGAACACACCGATGATCTTTTGCAGCAGTGGCCCCTGGATCAGCGAAGCGGTCTTgg                                                                                >  3:212420/1‑149 (MQ=255)
                                                                      ccTGCACCGATCAGCCCAGGTTTGCCGGGGACGCCACGGCTGGCCTTGGGTTTGAGGTCAAGGGCCATCTGCGCGGCGATGACCAGGGCGAACACACCGATGATCTTTTGCAGCAGTGGCCCCTGGATCAGCGAAGCGGTCTTGGCAcc                                                                            >  2:136273/1‑149 (MQ=255)
                                                                             cGATCAGCCCAGGTTTGCCGGGGACGCCACGGCTGGCCTTGGGTTTGAGGTCAAGGGCCATCTGCGCGGCGATGACCAGGGCGAACACACCGATGATCTTTTGCAGCAGTGGCCCCTGGATCAGCGAAGCGGTCTTGGCACCGACACCg                                                                     <  6:27124/149‑1 (MQ=255)
                                                                              gATCAGCCCAGGTTTGCCGGGGACGCCACGGCTGGCCTTGGGTTTGAGGTCAAGGGCCATCTGCGCGGCGATGACCAGGGCGAACACACCGATGATCTTTTGCAGCAGTGGCCCCTGGATCAGCGAAGCGGTCTTGGCACCGACACCgg                                                                    >  3:207393/1‑149 (MQ=255)
                                                                                    cccAGGTTTGCCGGGGACGCCACGGCTGGCCTTGGGTTTGAGGTCAAGGGCCATCTGCGCGGCGATGACCAGGGCGAACACACCGATGATCTTTTGCAGCAGTGGCCCCTGGATCAGCGAAGCGGTCTTGGCACCGACACCGGcccc                                                                >  7:253741/1‑147 (MQ=255)
                                                                                    cccAGGTTTGCCGGGGACGCCACGGCTGGCCTTGGGTTTGAGGTCAAGGGCCATCTGCGCGGCGATGACCAGGGCGAACACACCGATGATCTTTTGCAGCAGTGGCCCCTGGATCAGCGAAGCGGTCTTGGCACCGACACCGGcccc                                                                >  3:168962/1‑147 (MQ=255)
                                                                                           ttGCCGGGGACGCCACGGCTGGCCTTGGGTTTGAGGTCAAGGGCCATCTGCGCGGCGATGACCAGGGCGAACACACCGATGATCTTTTGCAGCAGTGGCCCCTGGATCAGCGAAGCGGTCTTGGCACCGACACCGGCCCCCAGGAGGAt                                                       >  6:264928/1‑149 (MQ=255)
                                                                                              ccGGGGACGCCACGGCTGGCCTTGGGTTTGAGGTCAAGGGCCATCTGCGCGGCGATGACCAGGGCGAACACACCGATGATCTTTTGCAGCAGTGGCCCCTGGATCAGCGAAGCGGTCTTGGCACCGACACCGGc                                                                   >  3:112497/1‑134 (MQ=255)
                                                                                              ccGGGGACGCCACGGCTGGCCTTGGGTTTGAGGTCAAGGGCCATCTGCGCGGCGATGACCAGGGCGAACACACCGATGATCTTTTGCAGCAGTGGCCCCTGGATCAGCGAAGCGGTCTTGGCACCGACACCGGc                                                                   <  4:112497/134‑1 (MQ=255)
                                                                                              ccGGGGACGCCACGGCTGGCCTTGGGTTTGAGGTCAAGGGCCATCTGCGCGGCGATGACCAGGGCGAACACACCGATGATCTTTTGCAGCAGTGGCCCCTGGATCAGCGAAGCGGTCTTGGCACCGACACCGGCCCCCAGGAGGATGc                                                     <  2:301605/148‑1 (MQ=255)
                                                                                                ggggACGCCACGGCTGGCCTTGGGTTTGAGGTCAAGGGCCATCTGCGCGGCGATGACCAGGGCGAACACACCGATGATCTTTTGCAGCAGTGGCCCCTGGATCAGCGAAGCGGTCTTGGCACCGACACCGGCCCCCAGGAGGATGCCGa                                                  <  1:1268/149‑1 (MQ=255)
                                                                                                  ggACGCCACGGCTGGCGTTGGGTTTGAGGTCAAGGGCCATCTGCGCGGCGATGACCAGGGCGAACACACCGATGATCTTTTGCAGCAGTGGCCCCTGGATCAGCGAAGCGGTCTTGGCACCGACACCGGCCCCCAGGAGGATGCCGATg                                                <  4:46150/149‑1 (MQ=255)
                                                                                                  catcgccgcgcagatggcccttgacctcaaacccaaggccagccgtggcgATGACCAGGGCGAACACACCGATGATCTTTTGCAGCAGTGGCCCCTGGATCAGCGAAGCGGTCTTGGCACCGACACCGGCCCCCAGGAGGATGCCGAt                                                 <  5:317183‑M2/98‑1 (MQ=255)
                                                                                                  catcgccgcgcagatggcccttgacctcaaacccaaggccagccgtggcgATGACCAGGGCGAACACACCGATGATCTTTTGCAGCAGTGGCCCCTGGATCAGCGAAGCGGTCTTGGCACCGACACCGGCCCCCAGGAGGATGCCGAt                                                 >  6:317183‑M2/51‑148 (MQ=255)
                                                                                                    tcgccgcgcagatggcccttgacctcaaacccaaggccagccgtggcgATGACCAGGGCGAACACACCGATGATCTTTTGCAGCAGTGGCCCCTGGATCAGCGAAGCGGTCTTGGCACCGACACCGGCCCCCAGGAGGATGCCGATGGt                                              >  6:89557‑M2/49‑149 (MQ=255)
                                                                                                        CACGGGGGGCCTTGGGTTTGAGGTCAAGGGCGATCTGCGCGGCGATGACCAGGGGGAACACACCGATGATCTTTTGCAGCAGTGGCCGCTGGATCAGCGAAGCGGTCTTGGCACCGACACCGGCCCCCAGGAGGATGCCGATGGTCATc                                          >  7:162982‑M1/1‑149 (MQ=255)
                                                                                                         aCGGCTGGCCTTGGGTTTGAGGTCAAGGGCCATCTGCGCGGCGATGACCAGGGCGAACACACCGATGATCTTTTGCAGCAGTGGCCCCTGGATCAGCGAAGCGGTCTTGGCACCGACACCGGCCCCCAGGAGGATGCCGATGGTCATcc                                         <  4:207393/149‑1 (MQ=255)
                                                                                                             cTGGCCTTGGGTTTGAGGTCAAGGGCCATCTGCGCGGCGATGACCAGGGCGAACACACCGATGATCTTTTGCAGCAGTGGCCCCTGGATCAGCGAAGCGGTCTTGGCACCGACACCGGCCCCCAGGAGGATGCCGATGGTCATCCAGAt                                     <  5:264928/149‑1 (MQ=255)
                                                                                                                gCCTTGGGTTTGAGGTCAAGGGCCATCTGCGCGGCGATGACCAGGGCGAACTCACCGATGATCTTTTGCAGCAGTGGCCCCTGGATCAGCGAAGCGGTCTTGGCACCGACACCGGCCCCCAGGAGGATTCCGATGGTCATCCAGATGa                                   <  6:297422/148‑1 (MQ=255)
                                                                                                                  cTTGGGTTTGAGGTCAAGGGCCATCTGCGCGGCGATGACCAGGGCGAACACACCGATGATCTTTTGCAGCAGTGGCCCCTGGATCAGCGAAGCGGTCTTGGCACCGACACCGGCCCCCAGGAGGATGCCGATGGTCATCCAGATg                                    >  3:271303/1‑145 (MQ=255)
                                                                                                                   ttGGGTTTGAGGTCAAGGGCCATCTGCGCGGCGATGACCAGGGCGAACACACCGATGATCTTTTGCAGCAGTGGCCCCTGGATCAGCGAAGCGGTCTTGGCACCGACACCGGCCCCCAGGAGGATGCCGATGGTCATCCAGATg                                    >  1:106643/1‑144 (MQ=255)
                                                                                                                        tttGAGGTCAAGGGCCATCTGCGCGGCGATGACCAGGGCGAACACACCGATGATCTTTTGCAGCAGTGGCCCCTGGATCAGCGAAGCGGTCTTGGCACCGACACCGGCCCCCAGGAGGATGCCGATGGTCATCCAGATGAAGATCGGc                           <  4:13149/148‑1 (MQ=255)
                                                                                                                        tttGAGGTCAAGGGCCATCTGCGCGGCGATGACCAGGGCGAACACACCGATGATCTTTTGCAGCAGTGGCCCCTGGATCAGCGAAGCGGTCTTGGCACCGACACCGGCCCCCAGGAGGATGCCGATGGTCATCCAGATGAAGATCGGc                           >  3:13149/1‑148 (MQ=255)
                                                                                                                           gAGGTCAAGGGCCATCTGCGCGGCGATGACCAGGGCGAACACACCGATGATCTTTTGCAGCAGTGGCCCCTGGATCAGCGAAGCGGTCTTGGCACCGACACCGGCCCCCAGGAGGATGCCGATGGTCATCCAGATGAAGATCGGCCAtt                       >  5:958/1‑149 (MQ=255)
                                                                                                                              gTCAAGGGCCATCTGCGCGGCGATGACCAGGGCGAACACACCGATGATCTTTTGCAGCAGTGGCCCCTGGATCAGCGAAGCGGTCTTGGCACCGACACCGGCCCCCAGGAGGATGCCGATGGTCATCCAGATGAAGATCGGCCATTGCa                    >  6:134743/1‑149 (MQ=255)
                                                                                                                                   gggCCATCTGCGCGGCGATGACCAGGGCGAACACACCGATGATCTTTTGCAGCAGTGGCCCCTGGATCAGCGAAGCGGTCTTGGCACCGACACCGGCCCCCAGGAGGATGCCGATGGTCATCCAGATGAAGATCGGCCATTGCACcgcg               <  6:40947/149‑1 (MQ=255)
                                                                                                                                    ggCCATCTGCGCGGCGATGACCAGGGCGAACACACCGATGATCTTTTGCAGCAGTGGCCCCTGGATCAGCGAAGCGGTCTTGGCACCGACACCGGCCCCCAGGAGGATGCCGATGGTCATCCAGATGAAGATCGGCCATTGCACcgcgc              >  2:229111/1‑149 (MQ=255)
                                                                                                                                       cATCTGCGCGGCGATGACCAGGGCGAACACACCGATGATCTTTTGCAGCAGTGGCCCCTGGATCAGCGAAGCGGTCTTGGCACCGACACCGGCCCCCAGGAGGATGCCGATGGTCATCCAGATGAAGATCGGCCATTGCACCGCGCGCt           >  8:7114/1‑149 (MQ=255)
                                                                                                                                            gcgcGGCGATGACCAGGGCGAACACACCGATGATCTTTTGCAGCAGTGGCCCCTGGATCAGCGAAGCGGTCTTGGCACCGACACCGGCCCCCAGGAGGATGCCGATGGTCATCCAGATGAAGATCGGCCATTGCACCGCGCGCTTGCgg      >  6:207217/1‑149 (MQ=255)
                                                                                                                                             cgcgGCGATGACCAGGGCGAACACACCGATGATCTTTTGCAGCAGTGGCCCCTGGATCAGCGAAGCGGTCTTGGCACCGACACCGGCCCCCAGGAGGATGCCGATGGTCATCCAGATGAAGATCGGCCATTGCACCGCGCGCTTGCggt     <  3:152253/149‑1 (MQ=255)
                                                                                                                                              gcggcgATGACCAGGGCGAACACACCGATGATCTTTTGCAGCAGTGGCCCCTGGATCAGCGAAGCGGTCTTGGCACCGACACCGGCCCCCAGGAGGATGCCGATGGTCATCCAGATGAAGATCGGCCATTGCACCGCGCGCTTGCggtg    <  4:168962/149‑1 (MQ=255)
                                                                                                                                              gcggcgATGACCAGGGCGAACACACCGATGATCTTTTGCAGCAGTGGCCCCTGGATCAGCGAAGCGGTCTTGGCACCGACACCGGCCCCCAGGAGGATGCCGATGGTCATCCAGATGAAGATCGGCCATTGCACCGCGCGCTTGCggtg    <  5:46505/149‑1 (MQ=255)
                                                                                                                                              gcggcgATGACCAGGGCGAACACACCGATGATCTTTTGCAGCAGTGGCCCCTGGATCAGCGAAGCGGTCTTGGCACCGACACCGGCCCCCAGGAGGATGCCGATGGTCATCCAGATGAAGATCGGCCATTGCACCGCGCGCTTGCggtg    <  2:308332/149‑1 (MQ=255)
                                                                                                                                               cggcgATGACCAGGGCGAACACCCCGCTGATCTTTTGCAGCAGGGGCCCCTGGATCAGCGAAGCGGTCTTGGCACCGACACCGGCCCCCAGGAGGATGCCGATGGTCATCCAGATGAAGAGCGGCCATTGCACCGCGCGCTTGCggtgg   <  4:142007/149‑1 (MQ=255)
                                                                                                                                               cggcgATGACCAGGGCGAACACACCGATGATCTTTTGCCGCAGTGGCCCCTGGATCAGCGAAGCGGTCTTGGCACCGACACCGGCCCCCAGGAGGATGCCGATGGTCATCCAGATGATGATCGGCCATTGCACCGCGCGCTTGCggtgg   <  7:47724/149‑1 (MQ=255)
                                                                                                                                                ggcgATGACCCGGGCGAACACACCGAGGATCTTTTGCAGCTGTGCGCCCTGGCTCAGCGAAGCGGTGTTGGCAACGACACCGGCCCCCAGGAGTATGCCGATGGTCATCCAGCTGAAGATCGGCCATTGGACCGCGCGCTTGCggtggt  <  8:61377/149‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                
GGTGAGGAACGGCACCGTCAGCGAACCACCGCCAATGCCGAAAATGGCCGAGGCCCAGCCAATCACGCCACCTGCACCGATCAGCCCAGGTTTGCCGGGGACGCCACGGCTGGCCTTGGGTTTGAGGTCAAGGGCCATCTGCGCGGCGATGACCAGGGCGAACACACCGATGATCTTTTGCAGCAGTGGCCCCTGGATCAGCGAAGCGGTCTTGGCACCGACACCGGCCCCCAGGAGGATGCCGATGGTCATCCAGATGAAGATCGGCCATTGCACCGCGCGCTTGCGGTGGT  >  NC_002947/5868865‑5869157

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.