| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 407,762 | A→T | 7.1% | A81A (GCT→GCA) | aceF ← | AceF‑S‑acetyldihydrolipoate |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 407,762 | 0 | A | T | 7.1% | 248.4 / 7.6 | 85 | A81A (GCT→GCA) | aceF | AceF‑S‑acetyldihydrolipoate |
| Reads supporting (aligned to +/- strand): ref base A (40/39); new base T (3/3); total (43/42) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.45e-01 | |||||||||||
CTTGCCCGACGAACCGATGTCCGGCACGTGGATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGC‑GCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGG‑GCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCGGTCGCCCAGCTTGACCTTCAGTTCCTTGATCACGCCAGCCTTGGGCGCCGGAATTTCCATGGAGGCCTTGTCGGACTCCAGGGTCAGCAGGCT > NC_002947/407615‑407908 | cTTGCCCGACGAACCGATGTCCGGCACGTGGATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGC‑GCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGG‑GCCgcag < 1:31400/149‑1 (MQ=255)cTTGCCCGACGAACCGATGTCCGGCACGTGGATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGC‑GCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGG‑GCCgcag > 7:296047/1‑149 (MQ=255) gCCCGACGAACCGATGTCCGGCACGTGGATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGC‑ACCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGG‑GCCgcagc < 8:35899/147‑1 (MQ=255) acgaACCGATGTCCGGCACGTGGATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGC‑GCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGG‑GCCGCAGCAgcggcg > 3:215384/1‑149 (MQ=255) ccGATGTCCGGCACGTGGATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGC‑GCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGG‑GCCGCAGCAGCGGCGCCCTc < 1:310301/149‑1 (MQ=255) gctGTCCGGCACGTGGATGTCCTGCACGCTGGCAGCAGCCGGGGCGGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGC‑GCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGGCGCCGCTGCTGCGGcccctgag < 8:138124/147‑5 (MQ=255) gATGTCCGGCACGTGGATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGC‑GCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGGCGCCGCTGCTGCGGcccctgag < 3:256114/149‑5 (MQ=255) tCCGGCACGTGGATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGC‑GCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGG‑GCCGCAGCAGCGGCGCCCTCGGCTTc > 4:264924/1‑149 (MQ=255) ccGGCACGTGGATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGC‑GCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGG‑GCCGCAGCAGCGGCGCCCTCGGCTTc > 6:5213/1‑148 (MQ=255) ggCACGTGGATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGC‑GCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGG‑GCCGCAGCAGCGGCGCCCtga > 7:146769/1‑139 (MQ=255) ggCACGTGGATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGC‑GCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGG‑GCCGCAGCAGCGGCGCCCtga < 8:146769/141‑3 (MQ=255) ggCACGTGGATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGC‑GCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGG‑GCCGCAGCAGCGGCGCCCTCGGCTTCCAg > 5:157689/1‑149 (MQ=255) gTGGATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGC‑GCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGG‑GCCGCAGCAGCGGCGCCCTCGGCTTCCa < 2:253243/143‑1 (MQ=255) gTGGATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCATCAGCGGCTGGCGCTGGC‑GCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGG‑GCCGCAGCAGCGGCGCCCTCGGCTTCCa > 1:253243/1‑143 (MQ=255) gATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGC‑GCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGG‑GCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACcagca < 6:189302/149‑1 (MQ=255) gATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGC‑GCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGG‑GCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACcagc < 7:9020/148‑1 (MQ=255) tGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGC‑GCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGG‑GCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGt < 7:13470/149‑1 (MQ=255) ccTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGC‑GCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGG‑GCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTtcg > 3:306985/1‑149 (MQ=255) tGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGC‑GCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGGCGCCGCTGCTGCGGcccctgag > 8:294116/1‑123 (MQ=255) tGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGC‑GCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGGCGCCGCTGCTGCGGcccctgag < 7:294116/127‑5 (MQ=255) tggagCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGC‑GCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGG‑GCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTtcgtcg > 4:311697/5‑149 (MQ=255) cACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGC‑GCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGG‑GCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTtcgtc < 6:157689/147‑1 (MQ=255) cACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGC‑GCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGG‑GCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTtcgtc < 6:289519/147‑1 (MQ=255) gCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCAACCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGG‑GCCGCAGCAGCGGCGCCATCGGCTTCCAGGACCAGCAGTTCGGCGCct > 1:92940/1‑149 (MQ=255) ccggCCGCAGCCCCGGCTGCTGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGC‑GCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGG‑GCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCcttc > 5:84569/3‑149 (MQ=255) ccggCCGCAGCCCCGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGC‑GCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGG‑GCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCcttc > 7:213175/3‑149 (MQ=255) ggCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGC‑GCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGG‑GCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCcttctt > 5:37862/1‑149 (MQ=255) ggCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGC‑GCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGG‑GCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCcttctt > 7:22929/1‑149 (MQ=255) gccgcagcCCCGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGC‑GCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGG‑GCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCttt < 8:213175/146‑1 (MQ=255) cagcagCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGC‑GCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGG‑GCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCttt > 5:135333/1‑148 (MQ=255) cagcagCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGC‑GCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGG‑GCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTc < 2:289700/149‑1 (MQ=255) catccGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGC‑GCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGG‑GCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACAAGCAGTTCGTCGCCTTCTTTCAg < 7:203482/145‑1 (MQ=255) agcCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGC‑GCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGG‑GCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGc > 6:33922/1‑149 (MQ=255) gcCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGC‑GCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGG‑GCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCg < 8:296047/149‑1 (MQ=255) ggggCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGC‑GCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGG‑GCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCGGTc < 5:5213/149‑1 (MQ=255) ccggCTGCTGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGC‑GCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGG‑GCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCGGTc > 7:164292/3‑149 (MQ=255) gggCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGC‑GCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGG‑GCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCGGTCg < 3:264924/149‑1 (MQ=255) gggCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGC‑GCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGG‑GCCGCAGCAGCGGCGCCCTCGGCTCCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCGGTCg < 4:249574/149‑1 (MQ=255) ccGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGC‑GCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGG‑GCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCGGTCGCCCAGCTTg < 8:22929/149‑1 (MQ=255) ccGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGC‑GCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGG‑GCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCGGTCGCCCAGCTTg < 3:59725/149‑1 (MQ=255) cGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGC‑GCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGG‑GCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCGGTCGCCCAGCTTGa > 6:12935/1‑149 (MQ=255) ggAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGC‑GCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGG‑GCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCGGTCGCCCAGCTTGAc > 4:7925/1‑149 (MQ=255) ggAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGC‑GCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGG‑GCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCGGTCGCCCAGCTTGAc > 4:62618/1‑149 (MQ=255) ggAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGC‑GCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGG‑GCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCGGTCGCCCAGCTTGAc > 6:291352/1‑149 (MQ=255) gAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGC‑GCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGG‑GCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAg < 6:329896/130‑1 (MQ=255) gAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGC‑GCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGG‑GCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAg > 5:329896/1‑130 (MQ=255) gcagGAGCGGCTTCAGCGGCTGGCGCTGGC‑GCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGG‑GCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCGGTCGCCCAGCTTGACCTTCAg > 7:72329/1‑149 (MQ=255) ggAGCGGCTTCAGCGGCTGGCGCTGGC‑GCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGG‑GCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCGGTCGCCCAGCTTGACCTTCAGTTc < 4:306985/149‑1 (MQ=255) gAGCGGCTTCAGCGGCTGGCGCTGGC‑GCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGG‑GCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCGGTCGCCCAGCTTGACCTTCAGTTcc < 3:7925/149‑1 (MQ=255) gAGCGGCTTCAGCGGCTGGCGCTGGC‑GCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGG‑GCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCGGTCGCCCAGCTTGACCTTCAGTTcc > 2:70588/1‑149 (MQ=255) ggCTTCAGCGGCTGGCGCTGGC‑GCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGG‑GCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCGGTCGCCCAGCTTGACCTTCAGTTCCTTGa < 3:311697/149‑1 (MQ=255) gCTTCAGCGGCTGGCGCTGGC‑GCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGG‑GCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCACTTCGTCGCCTTCTTTCAGGCGGTCGCCCAGCTTGACATTCAGTTCCTTGa > 6:56105/1‑148 (MQ=255) cTTCAGCGGCTGGCGCTGGC‑GCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGG‑GCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCGGTCGCCCAGCTTGACCTTCAGTTCCtt > 5:56464/1‑145 (MQ=255) cTTCAGCGGCTGGCGCTGGC‑GCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGG‑GCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCGGTCGCCCAGCTTGACCTTCAGTTCCtt < 6:56464/145‑1 (MQ=255) cTTCAGCGGCTGGCGCTGGC‑GCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGG‑GCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCGGTCGCCCAGCTTGACCTTCAGTTCCTTGAt > 8:34029/1‑148 (MQ=255) tCAGCGGCTGGCGCTGGC‑GCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGG‑GCCGTAGCAGCGGCGCCCTCGGCTTCCa > 3:21790/1‑85 (MQ=255) tCAGCGGCTGGCGCTGGC‑GCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGG‑GCCGTAGCAGCGGCGCCCTCGGCTTCCa < 4:21790/85‑1 (MQ=255) cAGCGGCTGGCGCTGGC‑GCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGG‑GCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCGGTCGCCCAGCTTGACCTTCAGTTCCTTGATCACg > 3:207762/1‑149 (MQ=255) ctggcgctggc‑gCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGG‑GCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCGGTCGCCCAGCTTGACCTTCAGTTCCTTGATCACGCCAGcc < 7:34029/149‑1 (MQ=255) tggcgctggc‑gcCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGG‑GCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCa < 4:238750/104‑1 (MQ=255) tggcgctggc‑gcCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGG‑GCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCa > 3:238750/1‑104 (MQ=255) gcgctggc‑gcCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGG‑GCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCGGTCGCCCAGCTTGACCTTCAGTTCCTTGATCACGCCAGCCtt < 1:70588/148‑1 (MQ=255) gcgctggc‑gcCGCAGCCGGAGCAGCGGCAGCAGCCGACGCCTCAGGG‑GCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCGGTCGCCCAGCTTGACCTTCAGTTCCTTGATCACGCCAGCCtt < 5:321425/148‑1 (MQ=255) cgctggc‑gcCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGG‑GCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCGGTCGCCCAGCTTGACCTTCAGTTCCTTGATCACGCCAGCCTTgg < 8:164292/149‑1 (MQ=255) gc‑gcCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGG‑GCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCGGTCGCCCAGCTTGACCTTCAGTTCCTTGATCACGCCAGCCTTGGGCGcc < 5:12935/149‑1 (MQ=255) gc‑gcCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGG‑GCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCGGTCGCCCAGCTTGACCTTCAGTTCCTTGATCACGCCAGCCTTGGGCGcc < 6:84569/149‑1 (MQ=255) gcAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGG‑GCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCGGTCGCCCAGCTTGACCTTCAGTTCCTTGATCACGCCAGCCTTggg < 4:196081/140‑1 (MQ=255) gcAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGG‑GCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCGGTCGCCCAGCTTGACCTTCAGTTCCTTGATCACGCCAGCCTTggg > 3:196081/1‑140 (MQ=255) aGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGG‑GCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCGGTCGCCTAGCTTGACCTTCAGTTCCTTGATCACGCCAGCCTTGGGCGCCGGAAttt > 5:87256/1‑149 (MQ=255) ggAGCAGCGGCAGCAGCCGGCGCCTCAGGG‑GCCGCAGCACCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGGCTTCTTTCAGGCGGTCGACCAGCTTGACCTTCAGTTCCTTGATCACGCCAGCCTTGGGCGCCGGAATTTCCAt > 1:173668/1‑149 (MQ=255) gAGCAGCGGCAGCAGCCGGCGCCTCAGGG‑GCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCGGTCGCCCAGCTTGACCTTCAGTTCCTTGATCACGCCAGCCTTGGGCGCCGGAATTTCCATg < 4:166730/149‑1 (MQ=255) gcagcGGCAGCAGCCGGCGCCTCAGGG‑GCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCGGTCGCCCAGCTTGACCTTCAGTTCCTTGATCACGCCAGCCTTGGGCGCCGGAATTTCCATGGa < 8:72329/149‑1 (MQ=255) cagcGGCAGCAGCCGGCGCCTCAGGG‑GCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCGGTCGCCCAGCTTGACCTTCAGTTCCTTGATCACGCGAGCCTTGGGCGCCGGAATTTCCATGGAg < 1:185688/149‑1 (MQ=255) cGGCAGCAGCCGGCGCCTCAGGG‑GCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCGGTCGCCCAGCTTGACCTTCAGTTCCTTGATCACGCCAGCCTTGGGCGCCGGAATTTCCATGGAGGcc > 6:76468/1‑149 (MQ=255) ggCAGCAGCCGGCGCCTCAGGG‑GCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCGGTCGCCCAGCTTGACCTTCAGTTCCTTGATCACGCCAGCCTTGGGCGCCGGAATTTCCATGGAGGCCt > 1:128857/1‑149 (MQ=255) agcagcCGGCGCCTCAGGG‑GCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCGGTTCGTCGCCTTCTTTCAGGCGGTCGCCCAGCTTGACCTTCAGTTCCTTGATCACGCCAGCCTTGGGCGCCGGAATTTCCATGGAGGCCTTGt > 5:127612/1‑149 (MQ=255) gcCGGCGCCTCAGCG‑GCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCGGTCGCCCAGCTTGACCTTCAGTTCCTTGATCACGCCAGCCTTGGGCGCCGGAATTTCCATGGAGGCCTTGTCggt < 6:161502/149‑2 (MQ=255) cgcCTCAGGG‑GCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCGGTCGCCCAGCTTGACCTTCAGTTCCTTGATCACGCCAGCCTTGGGCGCCGGAATTTCCATGGAGGCCTTGTCGGACTc > 3:279523/1‑147 (MQ=255) ccTCAGGG‑GCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCGGTCGCCCAGCTTGACCTTCAGTTCCTTGATCACGCCAGCCTTGGGCGCCGGAATTTCCATGGAGGCCTTGTCGGACTCCAgg < 4:215384/149‑1 (MQ=255) ccTCAGGG‑GCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCGGTCGCCCAGCTTGACCTTCAGTTCCTTGATCACGCCAGCCTTGGGCGCCGGAATTTCCATGGAGGCCTTGTCGGACTCCAgg < 3:149916/149‑1 (MQ=255) cTCAGGG‑GCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCGGTCGCCCAGCTTGACCTTCAGTTCCTTGATCACGCCAGCCTTGGGCGCCGGAATTTCCATGGAGGCCTTGTc < 4:86735/138‑1 (MQ=255) cTCAGGG‑GCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCGGTCGCCCAGCTTGACCTTCAGTTCCTTGATCACGCCAGCCTTGGGCGCCGGAATTTCCATGGAGGCCTTGTc > 3:86735/1‑138 (MQ=255) tCAGTG‑GCCGCAGCAGCGGCGCCATCGGCTTCCATGACCAGCAGTTCGTCGCCTTCTTTCAGGCGGTCGCCCAGCTTGACCTTCAGTTACTTGATCACGCAAGCCTTGGGCGCCGGAATTTCCATGGAGTACTTGTCGGACTCAATGGt > 6:248402/1‑149 (MQ=255) cgagggcgCCGCTGCTGCGGC‑CCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCGGACGCCCAGCTTGACCTTCAGTTCCTTGATCACGCCAGCCTTGGGCGCCGGAATTTCCATGGAGGCCTTGTCGGACTCCAGGGt > 5:28759/8‑149 (MQ=39) aGGG‑GCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCGGTCGCCCAGCTTGACCTTCAGTTCCTTGATCACGCCAGCCTTGGGCGCCGGAATTTCCATGGAGGCCTTGTCGGACTCCAGGGt > 4:302660/1‑147 (MQ=255) aGGG‑GCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCGGTCGCCCAGCTTGACCTTCAGTTCCTTGATCACGCCAGCCTTGGGCGCCGGAATTTCCATGGAGGCCTTGTCGGACTCCAGGGt > 7:224940/1‑147 (MQ=255) gggcgCCGCTGCTGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCGGTCGCCCAGCTTGACCTTCAGTTCCTTGATCACGCCAGCCTTGGGCGCCGGAATTTCCATGGAGGCCTTGTCGGACTCCAGGGt > 8:191088/5‑147 (MQ=255) ccGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCGGTCGCCCAGCTTGACCTTCAGTTCCTTGATCACGCCAGCCTTGGGCGCCGGAATTTCCATGGAGGCCTTGTCGGACTCCAGGGTCAGCAgg < 2:92940/149‑1 (MQ=255) gcagcaGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCGGTCGCCCAGCTTGACCTTCAGTTCCTTGATCACGCCAGCCTTGGGCGCCGGAATTTCCATGGAGGCCTTGTCGGACTCCAGGGTCAGCAGGct < 6:37862/149‑1 (MQ=255) gcagcaGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCGGTCGCCCAGCTTGACCTTCAGTTCCTTGATCACGCCAGCCTTGGGCGCCGGAATTTCCATGGAGGCCTTGTCGGACTCCAGGGTCAGCAGGc > 6:31995/1‑148 (MQ=255) | CTTGCCCGACGAACCGATGTCCGGCACGTGGATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGC‑GCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGG‑GCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCGGTCGCCCAGCTTGACCTTCAGTTCCTTGATCACGCCAGCCTTGGGCGCCGGAATTTCCATGGAGGCCTTGTCGGACTCCAGGGTCAGCAGGCT > NC_002947/407615‑407908 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |