| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,381,267 | T→C | 9.0% | intergenic (+32/+33) | bamE → / ← PP_4732 | outer membrane protein assembly factor BamE/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,381,267 | 0 | T | C | 9.0% | 211.0 / 9.3 | 78 | intergenic (+32/+33) | bamE/PP_4732 | outer membrane protein assembly factor BamE/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (33/38); new base C (4/3); total (37/41) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.02e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.07e-01 | |||||||||||
GCGCAACCTGAAGAAAAACCGGCCAAGCCTGGTTCGACCGAAGAGTCCATCCAGCGCGAGATCGACACCATCGAGACTACCCCGGTCCCGACCCCGGCACCGCTGGAAACCCGCTAAGCGGGAACATCAGATGCAAAAAAGC‑CCGGACTTGGTCCGGGCTTTTTTGTTTGCGCCTTATACGTCAGGCATTCAATTGCTTGGCACGC‑TGGCAGAACGCATCGACCAGCGTATTCGCCGCCTGATTGAATAGCGGGCCCAACGTGGCGCGCACAATCGGCCCGGCGTAATCGAAGGA > NC_002947/5381119‑5381413 | gcggAACCTGAAGAAAAACCGGCCAAGCCTGGTTCTACCGAAGACTCCATCCAGCGCGAGATCGACACCATCGAGACTACCCCGGTCCCGACCCCGGCACCGCTGGAAACCCGCTAAGCGGGAACATCAGATGCAAAAAAGC‑CCGGACt < 5:220347/149‑1 (MQ=255) cgcAACCTGAAGAAAAACCGGCCAAGCCTGGTTCGACCGAAGAGTCCATCCAGCGCGAGATCGACACCATCGAGACTACCCCGGTCCCGACCCCGGCACCGCTGGAAACCCGCTAAGCGGGAACATCAGATGCAAAAAAGC‑CCGGACtt > 6:175205/1‑149 (MQ=255) cgcAACCTGAAGAAAAACCGGCAAAGCCTTTTTAGAAAGAAGAGTCCATCCAGCGCGAGATCGACACCATCGAGACTACCCCGGTCCCGACCCCGGCACCGCTGGAAACCCGCTAAGCGGGAACATCAGATGCAAAAAAGC‑CCGGACtt < 6:295598/149‑1 (MQ=255) gcAACCTGAAGAAAAACCGGCCAAGCCTGGTTCGACCGAAGAGTCCATCCAGCGCGAGATCGACACCATCGAGACTACCCCGGTCCCGACCCCGGCACCGCTGGAAACCCGCTAAGCGGGAACATCAGATGCAAAAAAGC‑CCGGACTTg < 3:80901/149‑1 (MQ=255) gcAACCTGAAGAAAAACCGGCCAAGCCTGGTTCGACCGAAGAGTCCATCCAGCGCGAGATCGACACCATCGAGACTACCCCGGTCCCGACCCCGGCACCGCTGGAAACCCGCTAAGCGGGAACATCAGATGCAAAAAAGC‑ACGGACTTg > 6:259714/1‑149 (MQ=255) cTGAAGAAAAACCGGCCAAGCCTGGTTCGACCGAAGAGTCCATCCAGCGCGAGATCGACACCATCGAGACTACCCCGGTCCCGACCCCGGCACCGCTGGAAACCCGCTAAGCGGGAACATCAGATGCAAAAAAGC‑CCGGACTTGGTCCg < 1:135282/149‑1 (MQ=255) gaagaaAAACCGGCCAAGCCTGGTTCGACCGAAGAGTCCATCCAGCGCGAGATCGACACCATCGAGACTACCCCGGTCCCGACCCCGGCACCGCTGGAAACCCGCTAAGCGGGAACATCAGATGCAAAAAAGC‑CCGGACTTGGTCCggg > 4:44483/1‑149 (MQ=255) agaaAAACCGGCCAAGCCTGGTTCGACCGAAGAGTCCATCCAGCGCGAGATCGACACCATCGAGACTACCCCGGTCCCGACCCCGGCACCGCTGGAAACCCGCTAAGCGGGAACATCAGATGCAAAAAAGC‑CCGGACCAAGTCCGGGc < 3:147811/148‑1 (MQ=255) gaaAAACCGGCCAAGCCTGGTTCGACCGAAGAGTCCATCCAGCGCGAGATCGACACCATCGAGACTACCCCGGTCCCGACCCCGGCACCGCTGGAAACCCGCTAAGCGGGAACATCAGATGCAAAAAAGC‑ACGGACTTGGTCCGGGCtt > 5:69773/1‑149 (MQ=255) aaaaaCCGGCCAAGCCTGGTTCGACCGAAGAGTCCATCCAGCGCGAGATCGACACCATCGAGACTACCCCGGTCCCGACCCCGGCACCGCTGGAAACCCGCTAAGCGGGAACATCAGATGCAAAAAAGC‑CCGGACTTGGTCCGGGCttt > 4:177572/1‑149 (MQ=255) aaaaCCGGCCAAGCCTGGTTCGACCGAAGAGTCCATCCAGCGCGAGATCGACACCATCGAGACTACCCCGGTCCCGACCCCGGCACCGCTGGAAACCCGCTAAGCGGGAACATCAGATGCAAAAAAGC‑CCGGACTTGGTCCGGGCtttt < 5:175205/149‑1 (MQ=255) aaCCGGCCAAGCCTGGTTCGACCGAAGAGTCCATCCAGCGCGAGATCGACACCATCGAGACTACCCCGGTCCCGACCCCGGCACCGCTGGAAACCCGCTAAGCGGGAACATCAGATGCAAAAAAGC‑CCGGACTTGGTCCGGGCtttttt > 2:160495/1‑149 (MQ=255) cGGCCAAGCCTGGTTCGACCGAAGAGTCCATCCAGCGCGAGATCGACACCATCGAGACTACCCCGGTCCCGACCCCGGCACCGCTGGAAACCCGCTAAGCGGGAACATCAGATGCAAAAAAGC‑CCGGACTTGGTCCGGGCTTTtttgtt < 1:160495/149‑1 (MQ=255) gCCAAGCCTGGTTCGACCGAAGAGTCCATCCAGCGCGAGATCGACACCATCGAGACTACCCCGGTCCCGACCCCGGCACCGCTGGAAACCCGCTAAGCGGGAACATCAGATGCAAAAAAGC‑CCGGACTTGGTCCGGGCTTTtttgtttg > 5:209955/1‑149 (MQ=255) ccAAGCCTGGTTCGACCGAAGAGTCCATCCAGCGCGAGATCGACACCATCGAGACTACCCCGGGCCCGCCCCCGGCACCGCTGGAAACCCGCTAAGCGGGAACATCCGATGCAAAAAAGC‑CCGGACTTGGTCCGGGCTTTTTTGTTTgc < 1:227358/149‑1 (MQ=255) aaGCCTGGTTCGACCGAAGAGTCCATCCAGCGCGAGATCGACACCATCGAGACTACCCCGGTCCCGACCCCGGCACCGCTGGAAACCCGCTAAGCGGGAACATCAGATGCAAAAAAGC‑CCGGACTTGGTCCGGGCTTTTTTGTTTgcgc < 8:240864/149‑1 (MQ=255) gCCTGGTTCGACCGAAGAGTCCATCCAGCGCGAGATCGACACCATCGAGACTACCCCGGTCCCGACCCCGGCACCGCTGGAAACCCGCTAAGCGGGAACATCAGATGCAAAAAAGC‑CCGGACTTGGTCCGGGCTTTTTTGTTTGCGCCt < 3:99235/149‑1 (MQ=255) cTGGTTCGACCGAAGAGTCCATCCAGCGCGAGATCGACACCATCGAGACTACCCCGGTCCCGACCCCGGCACCGCTGGAAACCCGCTAAGCGGGAACATCAGATGCAAAAAAGC‑CCGGACTTGGTCCGGGCTTTTTTGTTTGCGCCTta > 1:135580/1‑149 (MQ=255) cTGGTTCGACCGAAGAGTCCATCCAGCGCGAGATCGACACCATCGAGACTACCCCGGTCCCGACCCCGGCACCGCTGGAAACCCGCTAAGCGGGAACATCAGATGCAAAAAAGC‑CCGGACCAAGTCCGGGCtttttt < 7:120221/137‑1 (MQ=255) cTGGTTCGACCGAAGAGTCCATCCAGCGCGAGATCGACACCATCGAGACTACCCCGGTCCCGACCCCGGCACCGCTGGAAACCCGCTAAGCGGGAACATCAGATGCAAAAAAGC‑CCGGACCAAGTCCGGGCtttttt > 8:120221/1‑137 (MQ=255) ggTTCGACCGAAGAGTCCATCCAGCGCGAGATCGACACCATCGAGACTACCCCGGTCCCGACCCCGGCACCGCTGGAAACCCGCTAAGCGGGAACATCAGATGCAAAAAAGC‑CCGGACTTGGt > 3:125526/1‑123 (MQ=255) ggTTCGACCGAAGAGTCCATCCAGCGCGAGATCGACACCATCGAGACTACCCCGGTCCCGACCCCGGCACCGCTGGAAACCCGCTAAGCGGGAACATCAGATGCAAAAAAGC‑CCGGACTTGGt < 4:125526/123‑1 (MQ=255) cGACCGAAGAGTCCATCCAGCGCGAGATCGACACCATCGAGACTACCCCGGTCCCGACCCCGGCACCGCTGGAAACCCGCTAAGCGGGAACATCAGATGCAAAAAAGC‑CCGGACTTGGTCCGGGCTTTTTTGTTTGCGCCTTATACGt < 7:120562/148‑1 (MQ=255) aCCGAAGAGTCCATCCAGCGCGAGATCGACACCATCGAGACTACCCCGGTCCCGACCCCGGCACCGCTGGAAACCCGCTAAGCGGGAACATCAGATGCAAAAAAGC‑CCGGACTTGGTCCGGGCTTTTTTGTTTGCGCCTTATACGTCAg > 3:74540/1‑149 (MQ=255) cGAAGAGTCCATCCAGCGCGAGATCGACACCATCGAGACTACCCCGGTCCCGACCCCGGCACCGCTGGAAACCCGCTAAGCGGGAACATCAGATGCAAAAAAGC‑CCGGACTTGGTCCGGGCTTTTTTGTTTGCGCCTTATACGTCAGGc < 8:194582/149‑1 (MQ=255) agagTCCATCCAGCGCGAGATCGACACCATCGAGACTACCCCGGTCCCGACCCCGGCACCGCTGGAAACCCGCTAAGCGGGAACATCAGATGCAAAAAAGC‑CCGGACTTGGTCCGGGCTTTTTTGTTTGCGCCTTATACGTCAGGCAtt < 3:76638/149‑1 (MQ=255) tccatccaGCGCGAGATCGACACCATCGAGACTACCCCGGTCCCGACCCCGGCACCGCTGGAAACCCGCTAAGCGGGAACATCAGATGCAAAAAAGC‑CCGGACTTGGTCCGGGCTTTTTTGTTTGCGCCTTATACGTCAGGCATTCAAt > 1:304252/1‑149 (MQ=255) caGCGCGAGATCGACACCATCGAGACTACCCCGGTCCCGACCCCGGCACCGCTGGAAACCCGCTAAGCGGGAACATCAGATGCAAAAAAGC‑CCGGACTTGGTCCGGGCTTTTTTGTTTGCGCCTTATACGTCAGGCATTCAATTGCTTg < 3:148853/149‑1 (MQ=255) gcgcGAGATCGACACCATCGAGACTACCCCGGTCCCGACCCCGGCACCGCTGGAAACCCGCTAAGCGGGAACATCAGATGCAAAAAAGC‑CCGGACTTGGTCCGGGCTTTTTTGTTTGCGCCTTATACGTCAGGCATTCAATTGCTTGGc < 3:241547/149‑1 (MQ=255) gcgAGATCGACACCATCGAGACTACCCCGGTCCCGACCCCGGCACCGCTGGAAACCCGCTAAGCGGGAACATCAGATGCAAAAAAGC‑CCGGACTTGGTCCGGGCTTTTTTGTTTGCGCCTTATACGTCAGGCATTCAATTGCTTGGCAc > 4:76044/1‑149 (MQ=255) gaTCGACACCATCGAGACTACCCCGGTCCCGACCCCGGCACCGCTGGAAACCCGCTAAGCGGGAACATCAGATGCAAAAAAGC‑CCGGACTTGGTCCGGGCTTTTTTGTTTGCGCCTTATACGTCAGGCATTCAATTGCTTGGCACGC‑Tg > 7:53669/1‑149 (MQ=255) tCGACACCATCGAGACTACCCCGGTCCCGACCCCGGCACCTCTGGAAACCCGCTAAGCGTGAACATCAGATGCAAAAAAGC‑CCGGACTTGGTCCGGGCTTTTTTGTTTGCGCCTTATACGTCAGGCATTCAATTGCTTGGCACGC‑TGGc < 5:259714/149‑1 (MQ=255) tCGACACCATCGAGACTACCCCGGTCCCGACCCCGGCACCGCTGGAAACCCGCTAAGCGGGAACATCAGATGCAAAAAAGC‑CCTGACTTGGTCCGGGCTTTTTTGTTTGCGCCTTATACGTCAGGCATTCAATTGCTTGGCACGC‑TGGc < 3:96433/149‑1 (MQ=255) tCGACACCATCGAGACTACCCCGGTCCCGACCCCGGCACCGCTGGAAACCCGCTAAGCGGGAACATCAGATGCAAAAAAGC‑CCGGACTTGGTCCGGGCTTTTTTGTTTGCGCCTTATACGTCAGGCATTCAATTGCTTGGCACGC‑TGGc < 2:222231/149‑1 (MQ=255) gACACCATCGAGACTACCCCGGTCCCGACCCCGGCACCGCTGGAAACCCGCTAAGCGGGAACATCAGATGCAAAAAAGC‑CCGGACTTGGTCCGGGCTTTTTTGTTTGCGCCTTATACGTCAGGCATTCAATTGCTTGGCACGC‑Tgg > 5:104271/1‑146 (MQ=255) gACACCATCGAGACTACCCCGGTCCCGACCCCGGCACCGCTGGAAACCCGCTAAGCGGGAACATCAGATGCAAAAAAGC‑CCGGACTTGGTCCGGGCTTTTTTGTTTGCGCCTTATACGTCAGGCATTCAATTGCTTGGCACGC‑TGGCAg < 4:74540/149‑1 (MQ=255) aTCGAGACTACCCCGGTCCCGACCCCGGCACCGCTGGAAACCCGCTAAGCGGGAACATCAGATGCAAAAAAGC‑CCGGACTTGGTCCGGGCTTTTTTGTTTGCGCCTTATACGTCAGGCATTCAATTGCTTGGCACGC‑TGGCAGAACGCa > 3:108492/1‑149 (MQ=255) tCGAGACTACCCCGGTCCCGACCCCGGCACCGCTGGAAACCCGCTAAGCGGGAACATCAGATGCAAAAAAGC‑CCGGACTTGGTCCGGGCTTTTTTGTTTGCGCCTTATACGTCAGGCATTCAATTGCTTGGCACGC‑TGGCAGAACGCAt > 2:275466/1‑149 (MQ=255) tACCCCGGTCCCGACCCCGGCACCGCTGGAAACCCGCTAAGCGGGAACATCAGATGCAAAAAAGC‑CCGGACTTGGTCCGGGCTTTTTTGTTTGCGCCTTATACGTCAGGCATTCAATTGCTTGGCACGC‑TGGCAGAACGCATCGACCAg > 7:45591/1‑149 (MQ=255) ccccGGTCCCGACCCCGGCACCGCTGGAAACCCGCTAAGCGGGAACATCAGATGCAAAAAAGC‑CCGGACTTGGTCCGGGCTTTTTTGTTTGCGCCTTATACGTCAGGCATTCAATTGCTTGGCACGC‑TGGCAGAACGCATCGACCAGc < 7:212798/148‑1 (MQ=255) ccccGGTCCCGACCCCGGCACCGCTGGAAACCCGCTAAGCGGGAACATCAGATGCAAAAAAGC‑CCGGACTTGGTCCGGGCTTTTTTGTTTGCGCCTTATACGTCAGGCATTCAATTGCTTGGCACGC‑TGGCAGAACGCATCGACCAGc > 8:212798/1‑148 (MQ=255) ccccGGTCCCGACCCCGGCACCGCTGGAAACCCGCTAAGCGGGAACATCAGATGCAAAAAAGC‑CCGGACTTGGTCCGGGCTTTTTTGTTTGCGCCTTATACGTCAGGCATTCAATTGCTTGGCACGC‑TGGCAGAACGCATCGACCAGc < 3:239983/148‑1 (MQ=255) cccGGTCCCGACCCCGGCACCGCTGGAAACCCGCTAAGCGGGAACATCAGATGCAAAAAAGC‑CCGGACTTGGTCCGGGCTTTTTTGTTTGCGCCTTATACGTCAGGCATTCAATTGCTTGGCACGC‑TGGCAGAACGCATCGACCAGCg > 8:29536/1‑148 (MQ=255) ccGGTCCCGACCCCGGCACCGCTGGAAACCCGCTAAGCGGGAACATCAGATGCAAAAAAGC‑CCGGACTTGGTCCGGGCTTTTTTGTTTGCGCCTTATACGTCAGGCATTCAATTGCTTGGCACGC‑TGGCAGAACGCATCGACCAGCGTa > 2:220613/1‑149 (MQ=255) ccGGTCCCGACCCCGGCACCGCTGGAAACCCGCTAAGCGGGAACATCAGATGCAAAAAAGC‑CCGGACTTGGTCCGGGCTTTTTTGTTTGCGCCTTATACGTCAGGCATTCAATTGCTTGGCACGC‑TGGCAGAACGCATCGACCAGCGTa > 7:216149/1‑149 (MQ=255) cGGTCCCGACCCCGGCACCGCTGGAAACCTGCTAAGCGGGAACATCAGATGCAAAAAAGC‑CCGGACTTGGTCCGGGCTTTTTTGTTTGCGCCTTATACGTCAGGCATTCAATTGCTTGGCACGC‑TGGCAGAACGCATCGACCAGCGTAt > 1:189280/1‑149 (MQ=255) cGGTCCCGACCCCGGCACCGCTGGAAACCCGCTAAGCGGGAACATCAGATGCAAAAAAGC‑CCGGACTTGGTCCGGGCTTTTTTGTTTGCGCCTTATACGTCAGGCATTCAATTGCTTGGCACGC‑TGGCAGACCGCATCGTCCAGCGTAt > 7:130307/1‑149 (MQ=255) gTCCCGACCCCGGCACCGCTGGAAACCCGCTAAGCGGGAACATCAGATGCAAAAAAGC‑CCGGACTTGGTCCGGGCTTTTTTGTTTGCGCCTTATACGTCAGGCATTCAATTGCTTGGCACGC‑TGGCAGAACg > 3:255795/1‑132 (MQ=255) gTCCCGACCCCGGCACCGCTGGAAACCCGCTAAGCGGGAACATCAGATGCAAAAAAGC‑CCGGACTTGGTCCGGGCTTTTTTGTTTGCGCCTTATACGTCAGGCATTCAATTGCTTGGCACGC‑TGGCAGAACg < 4:255795/132‑1 (MQ=255) gTCCCGACCCCGGCACCGCTGGAAACCCGCTAAGCGGGAACATCAGATGCAAAAAAGC‑CCGGACTTGGTCCGGGCTTTTTTGTTTGCGCCTTATACGTCAGGCATTCAATTGCTTGGCACGC‑TGGCAGAACGCATCGACCAGCGTATTc < 8:216149/149‑1 (MQ=255) cGACCCCGGCACCGCTGGAAACCCGCTAAGCGGGAACATCAGATGCAAAAAAGC‑CCGGACTTGGTCCGGGCTTTTTTGTTTGCGCCTTATACGTCAGGCATTCAATTGCTTGGCACGC‑TGGCAGAACGCATCGACCAGCGTATTcgccg > 7:35280/1‑149 (MQ=255) ccGGCACCGCTGGAAACCCGCTAAGCGGGAACATCAGATGCAAAAAAGC‑CCGGACTTGGTCCGGGCTTTTTTGTTTGCGCCTTATACGTCATGCATTCAATTGCTTGGCACGC‑TGGCAGAACGCATCGACCAGCGTATTCGCCGCCTGa > 7:197754/1‑149 (MQ=255) cGGCACCGCTGGAAACCCGCTAAGCGGGAACATCAGATGCAAAAAAGC‑CCGGACTTGGTCCGGGCTTTTTTGTTTGCGCCTTATACGTCAGGCATTCAATTGCTTGGCACGC‑TGGCAGAACGCATCGACCAGCGTATTCGCCGCCTGAt > 1:126948/1‑149 (MQ=255) cGCTGGAAACCCGCTAAGCGGGAACATCAGATTCAAAAAAGA‑CCGGACTTGGTCCTCGCTTTTATGTTTGCGCCTTATACGTCACGCATTCAATTGCTTGGCACGC‑TGGCAGAACGCATCGACCAGCGTATTCGCCGCATGAtacaat > 2:268505/1‑143 (MQ=255) gCTGGAAACCCGCTAAGCGGGAACATCAGATGCAAAAAAGC‑CCGGACTTGGTCCGGGCTTTTTTGTTTGCGCCTTATACGTCAGGCATTCAATTGCTTGGCACGC‑TGGCAGAACGCATCGACCAGCGTATTCGCCGCCTGATTGAATAg < 6:104271/149‑1 (MQ=255) gCTGGAAACCCGCTAAGCGGGAACATCAGATGCAAAAAAGC‑CCGGACTTGGTCCGGGCTTTTTTGTTTGCGCCTTATACGTCAGGCATTCAATTGCTTGGCACGC‑TGGCAGAACGCATCGACCAGCGTATTCGCCGCCTGATTGAATAg < 3:14363/149‑1 (MQ=255) cTGGAAACCCGCTAAGCGGGAACATCAGATGCAAAAAAGC‑CCGGACTTGGTCCGGGCTTTTTTGTTTGCGCCTTATACGTCAGGCATTCAATTGCTTGGCACGC‑TGGCAGAACGCATCGACCAGCGTATTCGCCGCCTGATTGAATAGc < 1:220613/149‑1 (MQ=255) cccGCTAAGCGGGAACATCAGATGCAAAAAAGCTCCGGACTTGGTCCGGGCTTTTTTGTTTGCGCCTTATACGTCAGGCATTCAATTGCTTGGCACGC‑TGGCAGAACGCATCGACCAGCGTATTCGCCGCCTGATTGAATAGCGGGcc > 1:39368/1‑148 (MQ=255) cccGCTAAGCGGGAACATCAGATGCAAAAAAGC‑CCGGACTTGGTCCGGGCTTTTTTGTTTGCGCCTTATACGTCAGGCATTCAATTGCTTGGCACGCTTGGCAGAACGCATCGACCAGCGTATTCGCCGCCTGATTGAATAGCGGGccc < 1:80709/149‑1 (MQ=255) aGCGGGAACATCAGATGCAAAAAAGC‑CCGGACTTGGTCCGGGCTTTTTTGTTTGCGCCTTATACGTCAGGCATTCAATTGCTTGGCACGC‑TGGCAGAACGCATCGACCAGCGTATTCGCCGCCTGATTGAATAGCGGGCCCAACGTg < 2:304252/147‑1 (MQ=255) gggAACATCAGATGCAAAAAAGC‑CCGGACTTGGTCCGGGCTTTTTTGTTTGCGCCTTATACGTCAGGCATTCAATTGCTTGGCACGC‑TGGCAGAACGCATCGACCAGCGTATTCGCCGCCTGATTGAATAGCGGGCCCAACGTGgcgcg > 6:144187/1‑149 (MQ=255) aaCATCAGATGCAAAAAAGC‑CCGGACTTGGTCCGGGCTTTTTTGTTTGCGCCTTATACGTCAGGCATTCAATTGCTTGGCACGC‑TGGCAGAACGCATCGACCAGCGTATTCGCCGCCTGATTGAATAGCGGGCCCAACGTGGCGCGcac < 3:177572/149‑1 (MQ=255) cATCAGATGCAAAAAAGC‑CCGGACTTGGTCCGGGCTTTTTTGTTTGCGCCTTATACGTCAGGCATTCAATTGCTTGGCACGC‑TGGCAGAACGCATCGACCAGCGTATTCGCCGCCTGATTGAATAGCGGGCCCAACGTGGCGCGCACaa < 5:271958/149‑1 (MQ=255) tCAGATGCAAAAAAGC‑CCGGACTTGGTCCGGGCTTTTTTGTTTGCGCCTTATACGTCAGGCATTCAATTGCTTGGCACGC‑TGGCAGAACGCATCGACCAGCGTATTCGCCGCCTGATTGAATAGCGGGCCCAACGTGGCGCGCACAATc < 8:45591/149‑1 (MQ=255) gATGCAAAAAAGC‑CCGGACTTGGTCCGGGGGTTTTTGTTTGCGCCTTATACGTCAGGCATTCAATTGCTTGGCACGC‑TGGCAGATCGCATAGACCAGCGTATTCGCCGACTGATTGAATAGCGGGCCCAACGTGGCGAGCACAAACGGc > 3:17738/1‑149 (MQ=255) gATGCAAAAAAGC‑CCGGACTTGGTCCGGGCTTTTTTGTTTGCGCCTTATACGTCAGGCATTCAATTGCTTGGCACGC‑TGGCAGAACGCATCGACCAGCGTATTCGCCGCCTGATTGAATAGCGGGCCCAACGTGGCGCGCACAATCGGc < 2:126948/149‑1 (MQ=255) cAAAAAAGC‑CCGGACTTGGTCCGGGCTTTTTTGTTTGCGCCTTATACGTCAGGCATTCAATTGCTTGGCACGC‑TGGCAGAACGCATCGACCAGCGTATTCGCCGCCTGATTGAATAGCGGGCCCAACGTGGCGCGCACAATCGGCCCgg > 3:111244/1‑149 (MQ=255) aaaaaaGC‑CCGGACTTGGTCCGGGCTTTTTTGTTTGCGCCTTATACGTCAGGCATTCAATTGCTTGGCACGC‑TGGCAGAACGCATCGACCAg < 4:91112/92‑1 (MQ=255) aaaaaaGC‑CCGGACCAAGTCCGGGCTTTTTTGTTTGCGCCTTATACGTCAGGCATTCAATTGCTTGGCACGC‑TGGCAGAACGCATCGACCAGCGTATTCGCCGCCTGATTGAATAGc < 1:158030/117‑1 (MQ=255) aaaaaaGC‑CCGGACCAAGTCCGGGCTTTTTTGTTTGCGCCTTATACGTCAGGCATTCAATTGCTTGGCACGC‑TGGCAGAACGCATCGACCAGCGTATTCGCCGCCTGATTGAATAGc > 2:158030/1‑117 (MQ=255) aaaaaGC‑CCGGACCAAGTCCGGGCTTTTTTGTTTGCGCCTTATACGTCAGGCATTCAATTGCTAGGCACGC‑TGGCAGAACGCATCGAACAGCGAATTCGCCGCCTGATTGAATAGCGGGCCCAACGTGGCGCGCACAATCGGCCCGGc > 6:3207/1‑148 (MQ=255) aaGC‑CCGGACTTGGTCCGGGCTTTTTTGTTTGCGCCTTATACGTCAGGCATTCAATTGCTTGGCACGC‑TGGCAGAACGCATCGACCAGCGTATTCGCCGCCTGATTGAATAGCGGGCCCAACGTGGCGCGCACAATCGGCCCGGCGTaa < 8:53669/149‑1 (MQ=255) c‑ccGGACTTGGTCCGGGCTTTTTTGTTTGCGCCTTATACGTCAGGCATTCAATTGCTTGGCACGC‑TGGCAGAACGCATCGACCAGCGTATTCGCCGCCTGATTGAATAGCGGGCCCAACGTGGCGCGCACAATCGGCCCGGCGTAATc > 4:212072/1‑148 (MQ=255) c‑ccGGACCAAGTCCGGGCTTTTTTGTTTGCGCCTTATACGTCAGGCATTCAATTGCTTGGCACGC‑TGGCAGAACGCATCGACCAGCGTATTCGCCGCCTGATTGAATAGCGGGCCCAACGTGGCGCGCACAATCGGCCCGGCGTAATc > 4:165618/1‑148 (MQ=255) ccGGACTTGGTCCGGGCTTTTTTGTTTGCGCCTTATACGTCAGGCATTCAATTGCTTGGCACGC‑TGGCAGAACGCATCGACCAGCGTATTCGCCGCCTGATTGAATAGCGGGCCCAACGTGGCGCGCACAATCGGCCCGGc < 7:78142/141‑1 (MQ=255) ccGGACTTGGTCCGGGCTTTTTTGTTTGCGCCTTATACGTCAGGCATTCAATTGCTTGGCACGC‑TGGCAGAACGCATCGACCAGCGTATTCGCCGCCTGATTGAATAGCGGGCCCAACGTGGCGCGCACAATCGGCCCGGc > 8:78142/1‑141 (MQ=255) cGGACTTGGTCCGGGCTTTTTTGTTTGCGCCTTATACGTCAGGCATTCAATTGCTTGGCACGC‑TGGCAGAACGCATCGACCAGCGTATTCGCCGGCTGATTGAATAGCGGGCCCAACGTGGCGCGCACAATCGGCCCGGCGTAATCGaa < 2:135580/149‑1 (MQ=255) cGGACTTGGTCCGGGCTTTTTTGTTTGCGCCTTATACGTCAGGCATTCAATTGCTTGGCACGC‑TGGCAGAACGCATCGACCAGCGTATTCGCCGCCTGATTGAATAGCGGGCCCAACGTGGCGCGCACAATCGGCCCGGCGTAATCGaa < 6:69773/149‑1 (MQ=255) cGGACTTGGTCCGGGCTTTTTTGTTTGCGCCTTATACGTCAGGCATTCAATTGCTTGGCACGC‑TGGCAGAACGCATCGACCAGCGTATTCGCCGCCTGATTGAATAGCGGGCCCAACGTGGCGCGCACAATCGGCCCGGCGTAATCGaa < 2:39368/149‑1 (MQ=255) ggACTTGGTCCGGGCTTTTTTGTTTGCGCCTTATACGTCAGGCATTCAATTGCTTGGCACGC‑TGGCAGAACGCATCGACCAGCGTATTCGCCGCCTGATTGAATAGCGGGCCCAACGTGGCGCGCACAATCGGCCCGGCGTAATCGAAg < 6:209955/149‑1 (MQ=255) ggACTTGGTCCGGGCTTTTTTGTTTGCGCCTTATACGTCAGGCATTCAATTGCTTGGCACGC‑TGGCAGAACGCATCGACCAGCGTATTCGCCGCCTGATTGAATAGCGGGCCCAACGTGGCGCGCACAATCGGCCCGGCGTAATCGAAg < 3:44483/149‑1 (MQ=255) ttGGTCCGGGCTTTTTTGAATGCGCCTTATACGTCAGCAAATCAATTACTTGGCACGC‑TGGCAGAACGCAACGACAAGCTTATTCTCAGACTGAATCAATAGCGGGCCCAACGTGGCGCGCCCAATCGGCCCGCCGAAATCGAAAGa > 6:97473/1‑147 (MQ=255) | GCGCAACCTGAAGAAAAACCGGCCAAGCCTGGTTCGACCGAAGAGTCCATCCAGCGCGAGATCGACACCATCGAGACTACCCCGGTCCCGACCCCGGCACCGCTGGAAACCCGCTAAGCGGGAACATCAGATGCAAAAAAGC‑CCGGACTTGGTCCGGGCTTTTTTGTTTGCGCCTTATACGTCAGGCATTCAATTGCTTGGCACGC‑TGGCAGAACGCATCGACCAGCGTATTCGCCGCCTGATTGAATAGCGGGCCCAACGTGGCGCGCACAATCGGCCCGGCGTAATCGAAGGA > NC_002947/5381119‑5381413 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |