Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 421,157 G→A 5.4% intergenic (+14/+4) PP_0347 → / ← PP_0348 hypothetical protein/hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_002947421,1570GA 5.4% 279.2 / 3.1 92intergenic (+14/+4)PP_0347/PP_0348hypothetical protein/hypothetical protein
Reads supporting (aligned to +/- strand):  ref base G (43/44);  new base A (2/3);  total (45/47)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.98e-01

TGTGCCAGCACGCCACCCAGCTCAGCTTCGCCCCGGCCTATGCCCGTGACCGGGCACGGCTGCTGCGCAACTGGCCCACTGGCAGTGCCTTGCATCAGCGGCTGGACCGGCTGTTGCCAAAACTGGTCGACTGAGGCCGCCGGCTCCGCTGTCAGTGGGCCGGCGGTGGTTGATCTGGCAGTGTCAGCCAGTCACTGCTGCGCCCTGCCTGGCGAACGCGTATCAGCCACTGGCCGTTTTCGTGGCGCAGCACCGCCCACGGCACCACCCCGGCGTTGCTGGCAACGGCAATCTC  >  NC_002947/421010‑421304
                                                                                                                                                   |                                                                                                                                                     
tgtgCCAGCACGCCACCCAGCTCAGCTTCGCCCCGGCCTATGCCCGTGACCGGGCACGGCTGCTGCGCAACTGGCCCACTGGCAGTGCCTTGCATCAGCGGCTGGACCGGCTGTTGCCAAAACTGGTCGACTGAGGCCGCCGGCTCCGc                                                                                                                                                      <  6:42007/149‑1 (MQ=255)
  taccAGCACGCCACCCAGCTCAGCTTCGCCCCGGCCTATGCCCGTGACCGGGCACGGCTGCTGCGCAACTGGCCCACTGGCAGTGCCTTGCATCAGCGGCTGGACCGGCTGTTGCCAAAACTGGTCGACTGAGGCCGCCGGCTCCGCTg                                                                                                                                                    >  7:270621/3‑149 (MQ=255)
    ccAGCACGCCACCCAGCTCAGCTTCGCCCCGGCCTATGCCCGTGACCGGGCACGGCTGCTGCGCAACTGGCCCACTGGCAGTGCCTTGCATCAGCGGCTGGACCGGCTGTTGCCAAAACTGGTCGACTGAGGCCGCCGGCTCCGCTGt                                                                                                                                                   <  3:29229/148‑1 (MQ=255)
       gCACGCCACCCAGCTCAGCTTCGCCCCGGCCTATGCCCGTGACCGGGCACGGCTGCTGCGCAACTGGCCCACTGGCAGTGCCTTGCATCAGCGGCTGGACCGGCTGTTGCCAAAACTGGTCGACTGAGGCCGCCGGCTCCGCTGTCAGt                                                                                                                                               >  6:75899/1‑149 (MQ=255)
         aCGCCACCCAGCTCAGCTTCGCCCCGGCCTATGCCCGTGACCGGGCACGGCTGCTGCGCAACTGGCCCACTGGCAGTGCCTTGCATCAGCGGCTGGACCGGCTGTTGCCAAAACTGGTCGACTGAGGCCGCCGGCTCCGCTGTCAGTgg                                                                                                                                             <  6:285679/149‑1 (MQ=255)
           gCCACCCAGCTCAGCTTCGCCCCGGCCTATGCCCGTGACCGGGCACGGCTGCTGCGCAACTGGCCCACTGGCAGTGCCTTGCATCAGCGGCTGGACCGGCTGTTGCCAAAACTGGTCGACTGAGGCCGCCGGCTCCGCTGTCAGTGGGc                                                                                                                                          <  5:327323/149‑1 (MQ=255)
           gCCACCCAGCTCAGCTTCGCCCCGGCCTATGCCCGTGACCGGGCACGGCTGCTGCGCAACTGGCCCACTGGCAGTGCCTTGCATCAGCGGCTGGACCGGCTGTTGCCAAAACTGGTCGACTGAGGCCGCCGGCTCCGCTGTCAGTGGGc                                                                                                                                          >  1:53027/1‑149 (MQ=255)
                ccAGCTCAGCTTCGCCCCGGCCTATGCCCGTGACCGGGCACGGCTGCTGCGCAACTGGCCCACTGGCAGTGCCTTGCATCAGCGGCTGGACCGGCTGTTGCCAAAACTGGTCGACTGAGGCCGCCGGCCCACTGACAGCGGAGCcggcg                                                                                                                                     <  6:97408/149‑1 (MQ=255)
                 cagctcagctTCGCCCCGGCCTATGCCCGTGACCGGGCACGGCTGCTGCGCAACTGGCCCACTGGCAGTGCCTTGCATCAGCGGCTGGACCGGCTGTTGCCAAAACTGGTCGACTGAGGCCGCCGGCTCCGCTGTCAGTGGGCcggcgg                                                                                                                                    <  8:270621/149‑1 (MQ=255)
                   gctcagctTCGCCCCGGCCTATGCCCGTGACCGGGCACGGCTGCTGCGCAACTGGCCCACTGGCAGTGCCTTGCATCAGCGGCTGGACCGGCTGTTGCCAAAACTGGTCGACTGAGGCCGCCGGCTCCGCTGTCAGt                                                                                                                                               >  2:74054/1‑137 (MQ=255)
                   gctcagctTCGCCCCGGCCTATGCCCGTGACCGGGCACGGCTGCTGCGCAACTGGCCCACTGGCAGTGCCTTGCATCAGCGGCTGGACCGGCTGTTGCCAAAACTGGTCGACTGAGGCCGCCGGCTCCGCTGTCAGTGGGCCGGCggtg                                                                                                                                  <  1:284496/149‑1 (MQ=255)
                     tcagctTCGCCCCGGCCTATGCCCGTGACCGGGCACGGCTGCTGCGCAACTGGCCCACTGGCAGTGCCTTGCATCAGCGGCTGGACCGGCTGTTGCCAAAACTGGTCGACTGAGGCCGCCGGCTCCGCTGTCAGTGGGCCGGCggtggt                                                                                                                                >  2:151270/1‑149 (MQ=255)
                       agctTCGCCCCGGCCTATGCCCGTGACCGGGCACGGCTGCTGCGCAACTGGCCCACTGGCAGTGCCTTGCATCAGCGGCTGGACCGGCTGTTGCCAAAACTGGTCGACTGAGGCCGCCGGCTCCGCTGTCAGTGGGCCGGCGGTGGTTg                                                                                                                              <  2:273660/149‑1 (MQ=255)
                       agctTCGCCCCGGCCTATGCCCGTGACCGGGCACGGCTGCTGCGCAACTGGCCCACTGGCAGTGCCTTGCATCAGCGGCTGGACCGGCTGTTGCCAAAACTGGTCGACTGAGACCGCCGGCCCACTGACAGCGGAGCcggcggcctc                                                                                                                                <  7:245852/147‑5 (MQ=38)
                              ccccGGCCTATGCCCGTGACCGGGCACGGCTGCTGCGCAACTGGCCCACTGGCAGTGCCTTGCATCAGCGGCTGGACCGGCTGTGGCCAAAACTGGTCGACTCAGGCCGCCGGCTCCGCTGTCTGGGGGCCGGCGGTGGTTGATCTGGc                                                                                                                       <  3:316158/149‑1 (MQ=255)
                               cccGGCCTATGCCCGTGACCGGGCACGGCTGCTGCGCAACTGGCCCACTGGCAGTGCCTTGCATCAGCGGCTGGACCGGCTGTTGCCAAAACTGGTCGACTGAGGCCGCCGGCTCCGCTGTCATTGGGCCGGCGGTGGTTGATCTgg                                                                                                                        >  4:81932/1‑147 (MQ=255)
                               cccGGCCTATGCCCGTGACCGGGCACGGCTGCTGCGCAACTGGCCCACTGGCAGTGCCTTGCATCAGCGGCTGGACCGGCTGTTGCCAAAACTGGTCGACTGAGGCCGCCGGCTCCGCTGTCAGTGGGCCGGCGGTGGTTGATCTgg                                                                                                                        >  5:300082/1‑147 (MQ=255)
                                ccGGCCTATGCCCGTGACCGGGCACGGCTGCTGCGCAACTGGCCCACTGGCAGTGCCTTGCATCAGCGGCTGGACCGGCTGTTGCCAAAACTGGTCGACTGAGGCCGCCGGCTCCGCTGTCAGTGGGCCGGCTGTGGTTTATCTGGCAg                                                                                                                     <  8:99584/149‑1 (MQ=255)
                                     cTATGCCCGTGACCGGGCACGGCTGCTGCGCAACTGGCCCACTGGCAGTGCCTTGCATCAGCGGCTGGACCGGCTGTTGCCAAAACTGGTCGACTGAGGCCGCCGGCTCCGCTGTCAGTGGGCCGGCGGTGGTTGATCTGGCAGTGTCa                                                                                                                >  4:94258/1‑149 (MQ=255)
                                      tATGCCCGTGACCGGGCACGGCTGCTACGCAACTGGCCCACTGGCAGTGCCTTGCATCAGCGGCTGGACCGGCTGTTGCCAAAACTGGTCGACTGAGGCCGCCGGCTCCGCTGTCAGTGGGCCGGCGGTGGTTGATCTGGCAGTGTCAg                                                                                                               >  2:282372/1‑149 (MQ=255)
                                        tGCCCGTGACCGGGCACGGCTGCTGCGCAACTGGCCCACTGGCAGTGCCTTGCATCAGCGGCTGGACCGGCTGTTGCCAAAACTGGTCGACTGAGGCCGCCGGCTCCGCTGTCAGTGGGCCGGCGGTGGTTGATCTGGCAGTGTCAGc                                                                                                             <  5:75899/148‑1 (MQ=255)
                                        tGCCCGTGACCGGGCACGGCTGCTGCGCAACTGGCCCACTGGCAGTGCCTTGCATCAGCGGCTGGACCGGCTGTTGCCAAAACTGGTCGACTGAGGCCACCGGCTCCGCTGTCAGTGGGCCGGCGGTGGTTGATCTGGCAGTGTCAGc                                                                                                             <  8:248944/148‑1 (MQ=255)
                                           ccGTGACCGGGCACGGCTGCTGCGCAACTGGCCCACTGGCAGTGCCTTGCATCAGCGGCTGGACCGGCTGTTGCCAAAACTGGTCGAGTGAGGCCGCCGGCTCCGCTGTCAGTGGGCCGGCGGTGGTTGATCTGGCAgt                                                                                                                    <  4:232566/139‑1 (MQ=255)
                                           ccGTGACCGGGCACGGCTGCTGCGCAACTGGCCCACTGGCAGTGCCTTGCATCAGCGGCTGGACCGGCTGTTGCCAAAACTGGTCGACTGAGGCCGCCGGCTCCGCTGTCAGTGGGCCGGCGGTGGTTGATCTGGCAgt                                                                                                                    >  3:232566/1‑139 (MQ=255)
                                            cGTGACCGGGCACGGCTGCTGCGCAACTGGCCCACTGGCAGTGCCTTGCATCAGCGGCTGGACCGGCTGTTGCCAAAACTGGTCGACTGAGGCCGCCGGCTCCGCTGTCAGTGGGCCGGCGGTGGTTGATCTGGCAGTGTCAGCCAGt                                                                                                         >  6:195357/1‑148 (MQ=255)
                                            cGTGACCGGGCACGGCTGCTGCGCAACTGGCCCACTGGCAGTGCCTTGCATCAGCGGCTGGACCGGCTGTTGCCAAAACTGGTCGACTGAGGCCGCCAGCTCCGCTGTCAGTGGGCCGGCCGTGGTTGATCTGGCAGTGTCAGCCAGt                                                                                                         >  3:76312/1‑148 (MQ=255)
                                                aCCGGGCACGGCTGCTGCGCAACTGGCCCACTGGCAGTGCCTTGCATCAGCGGCTGGACCGGCTGTTGCCAAAACTGGTCGACTGAGGCCGCCGGCTCCGCTGTCAGTGGGCCGGCGGTGGTTGATCTGGCAGTGTCAGCCAGTCActg                                                                                                    <  2:281679/149‑1 (MQ=255)
                                                 ccGGGCACGGCTGCTGCGCAACTGGCCCACTGGCAGTGCCTTGCATCAGCGGCTGGACCGGCTGTTGCCAAAACTGGTCGACTGAGGCCGCCGGCTCCGCTGTCAGTGGGCCGGCGGTGGTTGATCTGGCAGTGTCAGCCAGTCActgc                                                                                                   >  8:118554/1‑149 (MQ=255)
                                                  cGGGCACGGCTGCTGCGCAACTGGCCCACTGGCAGTGCCTTGCATCAGCGGCTGGACCGGCTGTTGCCAAAACTGGTCGACTGAGGCCGCCGGCTCCGCTGGCAGTGGGCCGGCGGTGGTTTATCTGGCAGTGTCAGCCAGTCActgct                                                                                                  >  6:115333/1‑149 (MQ=255)
                                                      cACGGCTGCTGCGCAACTGGCCCACTGGCAGTGCCTTGCATCAGCGGCTGGACCGGCTGTTGCCAAAACTGGTCGACTGAGGCCGCCGGCTCCGCTGTCAGTGGGCCGGCGGTGGTTGATCTGGCAGTGTCAGCCAGTCACTGCTgcgc                                                                                              <  7:118554/149‑1 (MQ=255)
                                                       aCGGCTGCTGCGCAACTGGCCCACTGGCAGTGCCTTGCATCAGCGGCTGGACCGGCTGTTGCCAAAACTGGTCGACTGAGGCCGCCGGCTCCGCTGTCAGTGGGCCGGCGGTGGTTGATCTGGCAGTGTCAGACAGTCACTGATGCGcc                                                                                             >  6:256201/1‑149 (MQ=255)
                                                         ggCTGCTGCGCAACTGGCCCACTGGCAGTGCCTTGCATCAGCGGCTGGACCGGCTGTTGCCAAAACTGGTCGACTGAGGCCGCCGGCTCCGCTGTCAGTGGGCCGGCGGTGGTTGATCTGGCAGTGTCAGCCAGTCACTGCTGCGCcct                                                                                           >  1:221954/1‑149 (MQ=255)
                                                           ctgctgCGCAACTGGCCCACTGGCAGTGCCTTGCATCAGCGGCTGGACCGGCTGTTGCCAAAACTGGTCGACTGAGGCCGCCGGCTCCGCTGTCAGTGGGCCGGCGGTGGTTGATCTGGCAGTGTCAGCCAGTCACTGCTGCGCcctgc                                                                                         <  2:221954/149‑1 (MQ=255)
                                                             gctgcGCAACTGGCCCACTGGCAGTGCCTTGCATCAGCGGCTGGACCGGCTGTTGCCAAAACTGGTCGACTGAGGCCGCCGGCTCCGCTGTCAGTGGGCCGGCGGTGGTTGATCTGGCAGTGTCAGCCAGTCACTGCTGCGCcctgcct                                                                                       >  6:74644/1‑149 (MQ=255)
                                                              ctgcGCAACTGGCCCACTGGCAGTGCCTTGCATCAGCGGCTGGACCGGCTGTTGCCAAAACTGGTCGACTGAGGCCGCCGGCTCCGCTGTCAGTGGGCCGGCGGTGGTTGATCTGGCAGTGTCAGCCAGTCACTGCTGCGCcctgcctg                                                                                      <  2:133131/149‑1 (MQ=255)
                                                                gcgcAACTCCCCCACTGGCAGTGCCTTCAATCAGCGGCTGGACCGGCTGTTGCCAAAACTGGTCGACTGAGGCCGCCGGCTCCGCTGTCAGTGGCCCGGCGGTGGTTGATCTCGCAGTCTCAGCCAGTCACTGCTGCCCcctcaatggc                                                                                    >  8:252887/1‑142 (MQ=255)
                                                                 cgcAACTGGCCCACTGGCAGTGCCTTGCATCAGCGGCTGGACCGGCTGTTGCCAAAACTGGTCGACTGAGGCCGCCGGCTCCGCTGTCAGTGGGCCGGCGGTGGTTGATCTGGCAGTGTCAGCCAGTCACTGCTGCGCCCTGCCTgg                                                                                     <  1:282372/147‑1 (MQ=255)
                                                                    aaCTGGCCCACTGGCAGTGCCTTGCATCAGCGGCTGGACCGGTTGTTGCCAATACTGGTCGACTGAGGCCGCCGGCTCCGCTGTCAGTGGGCCGGCGGTGGTTGATCTGGCAGTGTCAGCCAGTCACTGCTGCGCCCTGCCTGGCGAAc                                                                                <  5:323803/149‑1 (MQ=255)
                                                                      cTGGCCCACTGGCAGTGCCTTGCATCAGCGGCTGGACCGGCTGTTGCCAAAACTGGTCGACTGAGGCCGCCGGCTCCGCTGTCAGTGGGCCGGCGGTGGTTGATCTGGCAGTGTCAGCCAGTCACTGCTGCGCCCTGCCTGGCGAAcgc                                                                              <  5:74644/149‑1 (MQ=255)
                                                                      cTGGCCCACTGGCAGTGCCTTGCATCAGCGGCTGGACCGGCTGTTGCCAAAACTGGTCGACTGAGGCCGCCGGCTCCGCTGTCAGTGGGCCGGCGGTGGTTGATCTGGCAGTGTCAGCCAGTCACTGCTGCGCCCTGCCTGGCGAAcgc                                                                              <  8:107918/149‑1 (MQ=255)
                                                                      cTGGCACACTGGCAGTGCCTTGCAGCAGCGGATGGACCGGCTGTTGCCAAACCTGGTCGACTGAGGCCGCCGGCTCCGCTGTCAGTGGGCCGGCGGTGGTTGATCTGGCAGTGGCAGCCAGTCACTGCTGCGCCCTGCCTGGCGAAcgc                                                                              <  5:115333/149‑1 (MQ=255)
                                                                             aCTGGCAGTGCCTTGCATCAGCGGCTGGACCGGCTGTTGCCAAAACTGGTCGACTGAGGCCGCCGGCTCCGCTGTCAGTGGGCCGGCGGTGGTTGATCTGGCAGTGTCAGCCAGTCACTGCTGCGCCCTGCCTGGCGAACGCGTATCAg                                                                       >  7:183987/1‑149 (MQ=255)
                                                                              cTGGCAGTGCCTTGCATCAGCGGCTGGACCGGCTGTTGCCAAAACTGGTCGACTGAGGCCGCCGGCTCCGCTGTCAGTGGGCCGGCGGTGGTTGATCTGGCAGTGTCAGCCAGTCACTGCTGCGCCCTGCCTGGCGAACGCGTATCAGc                                                                      >  5:137624/1‑149 (MQ=255)
                                                                                 gCAGTGCCTTGCATCAGCGGCTGGACCGGCTGTTGCCAAAACTGATCGACTGAGGCCGCCGGCTCCGCTGTCAGTGGGCCGGCGGTGGTTGATCTGGCAGTGTCAGCCAGTCACTGCTGCGCCCTGCCTGGCGAACGCGTATCAGCCAc                                                                   >  1:231759/1‑149 (MQ=255)
                                                                                   aGTGCCTTGCATCAGCGGCTGGACCGGCTGTTGCCAAAACTGGTCGACTGAGGCCGCCGGCTCCGCTGTCAGTGGGCCGGCGGTGGTTGATCTGGCAGTGTCAGCCAGTCACTGCTGCGCCCTGCCTGGCGAACGCGTATCAGCCACTg                                                                 <  1:151270/149‑1 (MQ=255)
                                                                                    gTGCCTTGCATCAGCGGCTGGACCGGCTGTTGCCAAAACTGGTCGACTGAGGCCGCCGGCTCCGCTGTCAGTGGGCCGGCGGTGGTTGATCTGGCAGTGTCAGCCAGTCACTGCTGCGCCCTGCCTGGCGAACGCGTATCAGCCACTgg                                                                <  2:82697/149‑1 (MQ=255)
                                                                                            cATCAGCGGCTGGACCGGCTGTTGCCAAAACTGGTCGACTGAGGCCGCCGGCTCCGCTGTCAGTGGGCCGGCGGTGGTTGATCTGGCAGTGTCAGCCAGTCACTGCTGCGCCCTGCCTGGCGAACGCGTATCAGCCACTGGCCGTTTTc                                                        <  3:94258/149‑1 (MQ=255)
                                                                                              tCAGCGGCTGGACCGGCTGTTGCCAAAACTGGTCGACTGAGGCCGCCGGCTCCGCTGTCAGTGGGCCGGCGGTGGTTGATCTGGCAGTGTCAGCCAGTCACTGCTGCGCcctgcctg                                                                                      <  1:57606/117‑1 (MQ=255)
                                                                                              tCAGCGGCTGGACCGGCTGTTGCCAAAACTGGTCGACTGAGGCCGCCGGCTCCGCTGTCAGTGGGCCGGCGGTGGTTGATCTGGCAGTGTCAGCCAGTCACTGCTGCGCcctgcctg                                                                                      >  2:57606/1‑117 (MQ=255)
                                                                                              tCAGCGGCTGGACCGGCTGTTGCCAAAACTGGTCGACTGAGGCCGCCGGCTCCGCTGTCAGTGGGCCGGCGGTGGTTGATCTGGCAGTGTCAGCCAGTCACTGCTGCGCCCTGCCTGGCGAACGCGTATCAGCCAc                                                                   <  3:139269/136‑1 (MQ=255)
                                                                                              tCAGCGGCTGGACCGGCTGTTGCCAAAACTGGTCGACTGAGGCCGCCGGCTCCGCTGTCAGTGGGCCGGCGGTGGTTGATCTGGCAGTGTCAGCCAGTCACTGCTGCGCCCTGCCTGGCGAACGCGTATCAGCCAc                                                                   >  4:139269/1‑136 (MQ=255)
                                                                                              tCAGCGGCTGGACCGGCTGTTGCCAAAACTGGTCGACTGAGGCCGCCGGCTCCGCTGTCAGTGGGCCGGCGGTGGTTGATCTGGCAGTGTCAGCCAGTCACTGCTGCGCCCTGCCTGGCGAACGCGTATCAGCCACTGGCCGTTTTCGt                                                      >  3:36715/1‑149 (MQ=255)
                                                                                              tCAGCGGCTGGACCGGCTGTTGCCAAAACTGGTCGACTGAGGCCGCCGGCTCCGCTGTCAGTGGGCCGGCGGTGGTTGATCTGGCAGTGTCAGCCAGTCACTGCTGCGCCCTGCCTGGCGAACGCATATCAGCCACTGGCCGTTTTCGt                                                      >  5:78933/1‑149 (MQ=255)
                                                                                               cAGCGGCTGGACCGGCTGTTGCCAAAACTGGTCGACTGAGGCCGCCGGCTCCGCTGTCAGTGGGCCGGCGGTGGTTGATCTGGCAGTGTCAGCCAGTCACTGCTGCGCCCTGCCTGGCGAACGCATATCAGCCACTGGCCGTTTTCGt                                                      <  6:78933/148‑1 (MQ=255)
                                                                                                aGCTGCTGGACCGGCTGTTGCCAAAACTGGTCGACTGAGGCCGCCGGCTCCGCTGTCAGTGGGCCGGCGGTGGTTGATCTGGCAGTGTCAGCCAGTCACTGCTGCGCCCTGCCTGGCGAACGCGTATCAGCCACTGGCCGTTTTCGTgg                                                    <  2:53027/149‑1 (MQ=255)
                                                                                                aGCGGCTGGACCGGCTGTTGCCAAAACTGGTCGACTGAGGCCGCCAGCTCCGCTGTCAGTGGGCCGGCGGTGGTTGATCTGGCAGTGTCAGCCAGTCACTGCTGCGCCCTGCCTGGCGAACGCGTATCAGCCACTGGCCGTTTTCGTgg                                                    <  4:76312/149‑1 (MQ=255)
                                                                                                    gCTGGACCGGCTGTTGCCAAAACTGGTCGACTGAGGCCGCCGGCGCCGCTGTCAGTGGGCCGGCGGTGGTTGATCTGGCAGTGTCAGCCAGTCACTGCTGCGCCCTGCCTGGCGAACGCGTATCAGCCACTGGCCGTTTTCGTGGCgca                                                <  6:300082/149‑1 (MQ=255)
                                                                                                      tGGACCGGCTGTTGCCAAAACTGGTCGACTGAGGCCGCCGGCTCCGCTGTCAGTGGGCCGGCGGTGGTTGATCTGGCAGTGTCAGCCAGTCACTGCTGCGCCCTGCCTGGCGAACGCGTATCAGCCACTGGCCGTTTTCGTGGCgcagc                                              >  3:245101/1‑149 (MQ=255)
                                                                                                        gACCGGCTGTTGCCAAAACTGGTCGACTGAGGCCGCCGGCTCCGCTGTCAGTGGGCCGGCGGTGGTTGATCTGGCAGTGTCAGCCAGTCACTGCTGCGCCCTGCCTGGCGAACGCGTATCAGCCACTGGCCGTTTTCGTGGCgcagca                                             <  5:195357/148‑1 (MQ=255)
                                                                                                         aCCGGCTGTTGCCAAAACTGGTCGACTGAGGCCGCCGGCTCCGCTGTCAGTGGGCCGGCGGTGGTTGATCTGGCAGTGTCAGCCAGTCACTGCTGCGCCCTGCCTGGCGAACGCGTATCAGCCACTGGCCGTTTTCGTGGCGCAGCAcc                                           >  2:64902/1‑149 (MQ=255)
                                                                                                           cGGCTGTTGCCAAAACTGGTCGACTGAGGCCGCCGGCTCCGCTGTCAGTGGGCCGGCGGTGGTTGATCTGGCAGTGTCAGCCAGTCACTGCTGCGCCCTGCCTGGCGAACGCGTATCAGCCACTGGCCGTTTTCGTg                                                     <  6:218423/137‑1 (MQ=255)
                                                                                                           cGGCTGTTGCCAAAACTGGTCGACTGAGGCCGCCGGCTCCGCTGTCAGTGGGCCGGCGGTGGTTGATCTGGCAGTGTCAGCCAGTCACTGCTGCGCCCTGCCTGGCGAACGCGTATCAGCCACTGGCCGTTTTCGTg                                                     >  5:218423/1‑137 (MQ=255)
                                                                                                                 ttGCCAAAACTGGTCGACTGAGGCCGCCGGCTCCGCTGTCAGTGGGCCGGCGGTGGTTGATCTGGCAGTGTCAGCCAGTCACTGCTGCGCCCTGCCTGGCGAACGCGTATCAGCCACTGGCCGTTTTCGTGGCGCAGCACCGCCCAc                                     <  1:323482/147‑1 (MQ=255)
                                                                                                                   gCCAAAACTGGTCGACTGAGGCCGCCGCCTCCGCTGTCAGTGGGCCGGCGGTGGTTGATCTGGCACTGTCAGCCAGTCACTGCTGCGCCCTGCCTGGCGAACGCGTATCAGCCACTGGCCGTTTTCGTGGCGCAGCACCGCCCACGGca                                 >  7:37934/1‑149 (MQ=255)
                                                                                                                    ccAAAACTGGTCGACTGAGGCCGCCGGCTCCGCTGTCAGTGGGCCGGCGGTGGTTGATCTGGCAGTGTCAGCCAGTCACTGCTGCGCCCTGCCTGGCGAACGCGTATCAGCCACTGGCCGTTTTCGTGGCGCAGCACCGCCCACGGca                                 <  8:284827/148‑1 (MQ=255)
                                                                                                                       aaaCTGGTCGACTGAGGCCGCCGGCTCCGCTGTCAGTGGGCCGGCGGTGGTTGATCTGGCAGTGTCAGCCAGTCACTGCTGCGCCCTGCCTGGCGAACGCGTATCAGCCACTGGCCGTTTTCGTGGCGCAGCACCGCCCACGGcaccac                             <  3:77696/149‑1 (MQ=255)
                                                                                                                        aaCTGGTCGACTGAGGCCGCCGGCTCCGCTGTCAGTGGGCCGGCGGTGGTTGATCTGGCAGTGTCAGCCAGTCACTGCTGCGCCCTGACTGGCGAACGCGTATCAGCCACTGGCCGTTTTCGTGGCGCAGCACCGCCCACGGCcccccc                            >  2:212964/1‑149 (MQ=255)
                                                                                                                            ggTCGACTGAGGCCGCCGGCTCCGCTGTCAGTGGGCCGGCGGTGGTTGATCTGGCAGTGTCAGCCAGTCACTGCTGCGCCCTGCCTGGCGAACGCGTATCAGCCACTGGCCGTTTTCGTGGCGCAGCACCGCCCACGGCACCACCCCgg                        >  2:320860/1‑149 (MQ=255)
                                                                                                                             gTCGACTGAGGCCGCCGGCTCCGCTGTCAGTGGGACGGCGGTGGTTGATCTGGCAGTGTCAGCCAGTCACAGCTGCGCCCTGCCTGGCGAACGCGTATCAGCCACTGGCCCTTTTCGTGGCGCAGCACCGCCCACGGCACCACCCCCGc                       >  7:187752/1‑149 (MQ=255)
                                                                                                                              tCGACTGAGGCCGCCGGCTCCGCTGTCAGTGGGCCGGCGGTGGTTGATCTGGCAGTGTCAGCCAGTCACTGCTGCGCCCTGCCTGGCGAACGCGTATCAGCCACTGGCCGTTTTCGTGGCGCAGCACCGCCCACGGCACCACCCCGGCg                      >  8:108691/1‑149 (MQ=255)
                                                                                                                                gACTGAGGCCGCCGGCTCCGCTGTCAGTGGGCCGGCGGTGGTTGATCTGGCAGTGTCAGCCAGTCACTGCTGCGCCCTGCCTGGCGAACGCGTATCAGCCACTGGCCGTTTTCGTGGCGCAGCACCGCCCACGGCACCACCCCGGCGtt                    >  5:222801/1‑149 (MQ=255)
                                                                                                                                gACTGAGGCCGCCGGCTCCGCTGTCAGTGGGCCGGCGGTGGTTGATCTGGCAGTGTCAGCCAGTCACTGCTGCGCCCTGCCTGGCGAACGCGTATCAGCCACTGGCCGTTTTCGTGGCGCAGCACCGCCCACGGCACCACCCCGGCGtt                    >  2:142900/1‑149 (MQ=255)
                                                                                                                                 aCTGAGGCCGCCGGCTCCGCTGTCAGTGGGCCGGCGGTGGTTGATCTGGCAGTGTCAGGCAGTCACTGCTGCGCCCTGCCTGGCGAACGCGTATGAGCCACTGGCCGTTTTCGTGGCGCAGCACCGCCCACGGCACCACCCCGGCGTTg                   <  3:135067/149‑1 (MQ=255)
                                                                                                                                 aCTGAGGCCGCCGGCTCCGCTGTCAGTGGGCCGGCGGTGGTTGATCTGGCAGTGTCAGCCAGTCACTGCTGCGCCCTGCCTGGCGAACGCGTATCAGCCACTGGCCGTTTTCGTGGCGCAGCACCGCCCACGGCACCACCCCGGCGTTg                   <  7:252887/149‑1 (MQ=255)
                                                                                                                                   tGAGGCCGCCGGCTCCGCTGTCAGTGGGCCGGCGGTGGTTGATCTGGCAGTGTCAGCCAGTCACTGCTGCGCCCTGCCTGGCGAACGCGTATCAGCCACTGGCCGTTTTCGTGGCGCAGCACCGCCCACGGCACCACCCCGGCGTTGcc                 >  1:322047/1‑148 (MQ=255)
                                                                                                                                    gAGGCCGCCGGCTCCGCTGTCAGTGGGCCGGCGGTGGTTGATCTGGCAGTGTCAGCCAGTCACTGCTGCGCCCTGCCTGGCGAACGCGTATCAGCCACTGGCCGTTTTCGTGGCGCAGCACCGCCCACGGCACCACCCCGGCGTTGCTg                >  6:255312/1‑149 (MQ=255)
                                                                                                                                    accaccgccgGCCCACTGACAGCGGAGCCGGCGGTGGTTGATCTGGCAGTGTCAGCCAGTCACTGCTGCGCCCTGCCTGGCGAACGCGTATCAGCCACTGGCCGTTTTCGTGGCGCAGCACCGCCCACGGCACCACCCCGGCGTTGCTg                >  4:130639/5‑149 (MQ=255)
                                                                                                                                    accaccgccgGCCCACTGACAGCGGAGCCGGCGGTGGTTGATCTGGCAGTGTCAGCCAGTCACTGCTGCGCCCTGCCTGGCGAACGCGTATCAGCCACTGGCCGTTTTCGTGGCGCAGCACCGCCCACGGCACCACCCCGGCGTTGCTg                <  3:130639/145‑1 (MQ=255)
                                                                                                                                     ccaccgccgGCCCACTGACAGCGGAGCCGGCGGTGGTTGATCTGGCAGTGTCAGCCAGTCACTGCTGCGCCCTGCCTGGCGAACGCGTATCAGCCACTGGCCGTTTTCGTGGCGCAGCACCGCCCACGGCACCACCCCGGCGTTGCTgg               >  2:42797/4‑149 (MQ=255)
                                                                                                                                     aGGCCGCCGGCTCCGCTGTCAGTGGGCCGGCGGTGGTTGATCTGGCAGTGTCAGCCAGTCACTGCTGCGCCCTGCCTGGCGAACGCGTATCAGCCACTGGCCGTTTTCGTGGCGCAGCACCGCCCACGGCACCACCCCGGCGTTGCTgg               >  3:310041/1‑149 (MQ=255)
                                                                                                                                     aGGCCGCCGGCTCCGCTGTCAGTGGGCCGGCGGTGGTTGATCTGGCAGTGTCAGCCAGTCACTGCTGCGCCCTGCCTGGCGAACGCGTATCAGCCACTGGCCGTTTTCGTGGCGCAGCACCGCCCACGGCACCACCCCGGCGTTGCTgg               <  2:303786/149‑1 (MQ=255)
                                                                                                                                     aGGCCGCCGGCTCCGCTGTCAGTGGGCCGGCGGTGGTTGATCTGGCAGTGTCAGCCAGTCACTGCTGCGCCCTGCCTGGCGAACGCGTATCAGCCACTGGCCGTTTTCGTGGCGCAGCACCGCCCACGGCACCACCCCGGCGTTGCTgg               >  3:305039/1‑149 (MQ=255)
                                                                                                                                      ggCCGCCGGCTCCGCTGTCAGTGGGCCGGCGGTGGTTGATCTGGCAGTGTCAGAGCAGTCACTGCTGCGCCCTGCCTGGCGAACGCGTATCAGCCACTGGCCGTTTTCGTGGCGCAGCACCGCCCACGGCACCACCCCGGCGTTGCTgg               >  1:84916/1‑149 (MQ=255)
                                                                                                                                        ccgccgGCTCCGCTGTCAGTGGGCCGGCGGTGGTTGATCTGGCAGTGTCAGCCAGTCACTGCTGCGCCCTGCCTGGCGAACGCGTATCAGCCACTGGCCGTTTTCGTGGCGCAGCACCGCCCACGGCACCACCCCGGCGTTGCTGGCaa            <  5:88287/149‑1 (MQ=255)
                                                                                                                                        ccgcagGCTCCGCTGTCAGTGGGCCGGCGGTGGTTGATCTGGCAGTGTCAGCCAGTCACTGCTGCGCCCTGCCTGGCGAACGCGTATCAGCCACTGGCCGTTTTCGTGGCGCAGAACCGCCCACGGCACCACCCCGGCGTTGCTGGCac            >  6:106351/1‑148 (MQ=255)
                                                                                                                                          gccgGCTCCGCTGTCAGTGGGCCGGCGGTGGTTGATCTGGCAGTGTCAGCCAGTCACTGCTGCGCCCTGCCTGGCGAACGCGTATCAGCCACTGGCCGTTTTCGTGGCGCAGCACCGCCCACGGCACCACCCCGGCGTTGCCAGCAACg          >  6:91630/1‑149 (MQ=255)
                                                                                                                                            cgGCTCCGCTGTCAGTGGGCCGGCGGTGGTTGATCTGGCAGTGTCAGCCAGTCACTGCTGCGCCCTGCCTGGCGAACGCGTATCAGCCACTGGCCGTTTTCGTGGCGCAGCACCGCCCACGGCACCACCCCGGCGTTGCTGGCAACGGc        <  4:245101/149‑1 (MQ=255)
                                                                                                                                             ggCTCCGCTGTCAGTGGGCCGGCGGTGGTTGATCTGGCAGTGTCAGCCAGTCACTGCTGCGCCCTGCCTGGCGAACGCGTATCAGCCACTGGCCGTTTTCGTGGCGCAGCACCGCCCACGGCACCACCCCGGCGTTGCCAGCAACgccg       <  2:322047/149‑4 (MQ=255)
                                                                                                                                              gCTCCGCTGTCAGTGGGCCGGCGGTGGTTGATCTGGCAGTGTCAGCCAGTCACTGCTGCGCCCTGCCTGGCGAACGCGTATCAGCCACTGGCCGTTTTCGTGGCGCAGCACCGCCCACGGCACCACCCCGGCGTTGCCAGCAACgccgg      <  5:91630/149‑5 (MQ=255)
                                                                                                                                               cTCCGCTGTCAGTGGGCCGGCGGTGGTTGATCTGGCAGTGTCAGCCAGTCACTGCTGCGCCCTGCCTGGCGAACGCGTATCAGCCACTGGCCGTTTTCGTGGCGCAGCACCGCCCACGGCACCACCCCGGCGTTGCTGGCAACGGCAAt     <  6:137624/149‑1 (MQ=255)
                                                                                                                                                  cGCTGTCAGTGGGCCGGCGGTGGTTGATCTGGCAGTGTCAGCCAGTCACTGCTGCGCCCTGCCTGGCGAACGCGTATCAGCCACTGGCCGTTTTCGTGGCGCAGCACCGCCCACGGCACCACCCCGGCGTTGCTGGCAACGGCAAtctc  >  5:149130/1‑149 (MQ=255)
                                                                                                                                                  cGCTGTCAGTGGGCCGGCGGTGGTTGATCTGGCAGTGTCAGCCAGTCACTGCTGCGCCCTGCCTGGCGAACGCGTATCAGCCACTGGCCGTTTTCGTGGCGCAGCACCGCCCACGGCACCACCCCGGCGTTGCTGGCAACGGCAAtctc  <  4:36715/149‑1 (MQ=255)
                                                                                                                                                   gCTGTCAGTGGGCCGGCGGTGGTTGATCTGGCAGTGTCAGCCAGTCACTGCTGCGCCCTGCCTGGCGAACGCGTATCAGCCACTGGCCGTTTTCGTGGCGCAGCACCGCCCACGGCACCACCCCGGCGTTGCTGGCAACGGCAAtctc  >  1:253282/1‑148 (MQ=255)
                                                                                                                                                   |                                                                                                                                                     
TGTGCCAGCACGCCACCCAGCTCAGCTTCGCCCCGGCCTATGCCCGTGACCGGGCACGGCTGCTGCGCAACTGGCCCACTGGCAGTGCCTTGCATCAGCGGCTGGACCGGCTGTTGCCAAAACTGGTCGACTGAGGCCGCCGGCTCCGCTGTCAGTGGGCCGGCGGTGGTTGATCTGGCAGTGTCAGCCAGTCACTGCTGCGCCCTGCCTGGCGAACGCGTATCAGCCACTGGCCGTTTTCGTGGCGCAGCACCGCCCACGGCACCACCCCGGCGTTGCTGGCAACGGCAATCTC  >  NC_002947/421010‑421304

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: