| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,565,909 | A→T | 5.3% | L526Q (CTG→CAG) | mutL ← | DNA mismatch repair protein MutL |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,565,909 | 0 | A | T | 5.3% | 243.4 / 2.4 | 80 | L526Q (CTG→CAG) | mutL | DNA mismatch repair protein MutL |
| Reads supporting (aligned to +/- strand): ref base A (36/39); new base T (2/2); total (39/41) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.83e-01 | |||||||||||
AGCAGCTCATTGAGGTGCGCCTGAATGCGATCACTGGTGCCGTACTCCATAAGGTCGGCAAGCACGTCCTGCACCAGGCGGTTGGCTT‑CAGCCTGCTTGAGCAAGGCCGGGATCTGGCGAATCGCCAGGGTCTCGGGGCCCAGGCGCTGCAATTCGAAGCCCAGGCGCTGAAACCACTGTGCATGCTCTTCGGCACAGTCGGCTTCACGCTGGCTGAGGGCCAGGGTCTCCGGCACCAGCAGCGGCTGGCCGCTCAGGCCCTCGCTGGCCATGGCCACCTT > NC_002947/5565768‑5566048 | agcagcTCATTGAGGTGCGCCTGAATGCGATCACTGGTGCCGTACTCCATAAGGTCGGCAAGCACGTCCTGCACCAGGCGGTTGGCTT‑CAGCCTGCTTGAGCAAGGCCGGGATCTGGCGAATCGCCAGGGTCTCGGGGCCCAGGCGCTg < 8:139607/149‑1 (MQ=255) gcagcTCATTGAGGTGCGCCTGAATGCGATCACTGGTGCCGTACTCCATAAGGTCGGCAAGCACGTCCTGCACCAGGCGGTTGGCTT‑CAGCCTGCTTGAGCAAGGCCGGGATCTGGCGAATCGCCTGGGCCCCGAGACCCTGgcgattc < 7:226165/149‑5 (MQ=255) agcTCATTGAGGTGCGCCTGAATGCGATCACTGGTGCCGTACTCCATAAGGTCGGCAAGCACGTCCTGCACCAGGCGGTTGGCTT‑CAGCCTGCTTGAGCAAGGCCGGGATCTGGCGAATCGCCTGGGCCCCGAGACCCTGgcgattcgc < 1:326654/149‑7 (MQ=255) cTCATTGAGGTGCGCCTGAATGCGATCACTGGTGCCGTACTCCATAAGGTCGGCAAGCACGTCCTGCACCAGGCGGTTGGCTT‑CAGCCTGCTTGAGCAAGGCCGGGATCTGGCGAATCGCCAGGGTCTCGGGGCCCAGGCGCTGCAAtt < 8:154406/149‑1 (MQ=255) cTCATTGAGGTGCGCCTGAATGCGATCACTGGTGCCGTACTCCATAAGGTCGGCAAGCACGTCCTGCACCAGGCGGTTGGCTT‑CAGCCTGCTTGAGCAAGGCCGGGATCTGGCGAATCGCCAGGGTCTCGGGGCCCAGGCGCTGCAAtt > 6:286824/1‑149 (MQ=255) aTTGAGGTGCGCCTGAATGCGATCACTGGTGCCGTACTCCATAAGGTCGGCAAGCACGTCCTGCACCAGGCGGTTGGCTT‑CAGCCTGCTTGAGCAAGGCCGGGATCTGGCGAATCGCCAGGGTCTCGGGGCCCAGGCGCTGCAATTCg > 4:113074/1‑148 (MQ=255) aTTGAGGTGCGCCTGAATGCGATCACTGGTGCCGTACTCCATAAGGTCGGCAAGCACGTCCTGCACCAGGCGGTTGGCTT‑CAGCCTGCTTGAGCAAGGCCGGGATCTGGCGAATCGCCAGGGTCTCGGGGCCCAGGCGCTGCAATTCg > 4:250519/1‑148 (MQ=255) ggTGCGCCTGAATGCGAGCACTGGTGCCGTACTCCATAAGGTCGGCAAGCACGTCCTGCACCAGGCGGTTGGCTT‑CAGCCTGCTTGAGCGAGGCCGGGATCTGGCGAATCGCCAGGGTCTCGGGGCCCGGGCGCTGCAATTCGAGGccc > 6:163815/1‑149 (MQ=255) gTGCGCCTGAATGCGATCACTGGTGCCGTACTCCATAAGGTCGGCAAGCACGTCCTGCACCAGGCGGTTGGCTT‑CAGCCTGCTTGAGCAAGGCAGGGATCTGGCGAATCGCCAGGGTCTCGGGGCCCAGGCGCTGCAATTCGAAGcc > 5:217978/1‑147 (MQ=255) cTGAATGCGATCACTGGTGCCGTACTCCATAAGGTCGGCAAGCACGTCCTGCACCAGGCGGTTGGCTT‑CAGCCTGCTTGAGCAAGGCCGGGATCTGGCGAATCGCCAGGGTCTCGGGGCCCAGGCGCTGCAATTCGAAGCCCAGGCGCt > 6:151295/1‑149 (MQ=255) cTGAATGCGATCACTGGTGCCGTACTCCATAAGGTCGGCAAGCACGTCCTGCACCAGGCGGTTGGCTT‑CAGCCTGCTTGAGCAAGGCCGGGATCTGGCGAATCGCCAGGGTCTCGGGGCCCAGGCGCTGCAATTCGAAGCCCAGGCGCt > 2:23393/1‑149 (MQ=255) tGAATGCGATCACTGGTGCCGTACTCCATAAGGTCGGCAAGCACGTCCTGCACCAGGCGGTTGGCTT‑CAGCCTGCTTGAGCAAGGCCGGGATCTGGCGAATCGCCAGGGTCTCGGGGCCCAGGCGCTGCAATTCGAAGCCCAGGCGCt > 7:79253/1‑148 (MQ=255) aaTGCGATCACTGGTGCCGTACTCCATAAGGTCGGCAAGCACGTCGTGCACCAGGCGGTTGGCTT‑CAGCCTGCTTGAGCAAGGCCGGGATCTGGCGAATCGCCAGGGTCTCGGGGCCCAGGCGCTGCAATTCGAAGCCCAGGCGCTGa > 1:232001/1‑148 (MQ=255) aTGCGATCACTGGTGCCGTACTCCATAAGGTCGGCAAGCACGTCCTGCACCAGGCGGTTGGCTT‑CAGCCTGCTTGAGCAAGGCCGGGATCTGGCGAATCGCCAGGGTCTCGGGGCCCAGGCGCTGCAATTCGAAGCCCAGGCGCTGaa < 2:132596/148‑1 (MQ=255) aTGCGATCACTGGTGCCGTACTCCATAAGGTCGGCAAGCACGTCCTGCACCAGGCGGTTGGCTT‑CAGCCTGCTTGAGCAAGGCCGGGATCTGGCGAATCGCCAGGGTCTCGGGGCCCAGGCGCTGCAATTCGAAGCCCAGGCGCTGaa < 1:163608/148‑1 (MQ=255) cGATCACTGGTGCCGTACTCCATAAGGTCGGCAAGCACGTCCTGCACCAGGCGGTTGGCTT‑CAGCCTGCTTGAGCAAGGCCGGGATCTGGCGAATCGCCAGGGTCTCGGGGCCCAGGCGCTGCAATTCGAAGCCCAGGCGCTGAAACCa < 4:292438/149‑1 (MQ=255) aTCACTGGTGCTGTACTCCATAAGGTCGGCAAGCACGTCCTGCACCAGGCGGTTGGCTT‑CAGCCTGCTTGAGCAAGGCCGGGATCTGGCGAATCGCCAGGGTCTCGGGGCCCAGGCGCTGCAATTCGAAGCCCAGGCGCTGAAACCACt < 2:2684/149‑1 (MQ=255) tCACTGGTGCCGTACTCCATAAGGTCGGCAAGCACGTCCTGCACCAGGCGGTTGGCTT‑CAGCCTGCTTGAGCAAGGCCGGGATCTGGCGAATCGCCAGGGTCTCGGGGCCCAGGCGCTGCAATTCGAAGCCCAGGCGCTGAAACCACtg < 2:285859/149‑1 (MQ=255) aCTGGTGCCGTACTCCATAAGGTCGGCAAGCACGTCCTGCACCAGGCGGTTGGCTT‑CAGCCTGCTTGAGCAAGGCCGGGATCTGGCGAATCGCCAGGGTCTCGGGGCCCAGGCGCTGCAATTCGAAGCCCAGGCGCTGAAACCACtgt < 5:307083/148‑1 (MQ=255) cTGGTGCCGTACTCCATAAGGTCGGCAAGCACGTCCTGCACCAGGCGGTTGGCTT‑CAGCCTGCTTGAGCAAGGCCGGGATCTGGCGAATCGCCAGGGTCTCGGGGCCCAGGCGCTGCAATTCGAAGCCCAGGCGCTGAAACCACTGTGc < 5:151295/149‑1 (MQ=255) gTGCCGTACTCCATAAGGTCGGCAAGCACGTCCTGCACCAGGCGGTTGGCTT‑CAGCCTGCTTGAGCAAGGCCGGGATCTGGCGAATCGCCAGGGTCTCGGGGCCCAGGCGCTGCAATTCGAAGCCCAGGCGCTGAAACCACTGTGCATg < 6:17285/149‑1 (MQ=255) gTGCCGTACTCCATAAGGTCGGCAAGCACGTCCTGCACCAGGCGGTTGGCTT‑CAGCCTGCTTGAGCAAGGCCGGGATCTGGCGAATCGCCAGGGTCTCGGGGCCAAGGCGCTGCAATTCGAAGCCCAGGCGCTGAAACCACTGTGCATg < 1:68122/149‑1 (MQ=255) gTGCCGTACTCCATAAGGTCGGCAAGCAAGTCCTGCACCAGGCGGTTGGCTT‑CAGCCTGCTTGAGCAAGGCCGGGATCTTGCGAATCGCCAGGGTCTCGGTGCCCAGGCTCTGCAATTCGAAGCCCAGGCGCTGAAACCACTGTGCAt < 3:245553/148‑1 (MQ=255) cGTACTCCATAAGGTCGGCAAGCACGTCCTGCACCAGGCGGTTGGCTT‑CAGCCTGCTTGAGCAAGGCCGGGATCTGGCGAATCGCCAGGGTCTCGGGGCCCAGGCGCTGCAATTCGAAGCCCAGGCGCATCAACCACTGTGCATGctct > 8:86688/1‑149 (MQ=255) tACTCCATAAGGTCGGCAAGCACGTCCTGCACCAGGCGGTTGGCTT‑CAGCCTGCTTGAGCAAGGCCGGGATCTGGCGAATCGCCAGGGTCTCGGGGCCCAGGCGCTGCAATTCGAAGCCCAGGCGCTGAAACCACTGTGCATGCTCTTc < 5:286824/149‑1 (MQ=255) cTCCATAAGGTCGGCAAGCACGTCCTGCACCAGGCGGTTGGCTTGCAGCCTGCTTGAGCAAGGCCGGGATCTGGCGAATCGCCAGGGTCTCGGGGCCCAGGCGCTGCAATTCGAAGCCCAGGCGCTGAAACCACTGTGCATGCTCTTCg > 1:67186/1‑149 (MQ=255) cATAAGGTCGGCAAGCACGTCCTGCACCAGGCGGTTGGCTT‑CAGCCTGCTTGAGCAAGGCCGGGATCTGGCGAATCGCCAGGGTCTCGGGGCCCAGGCGCTGCAATTCGAAGCCCAGGCGCTGAAACCACTGTGCATGCTCTTCGGca > 1:261865/1‑148 (MQ=255) cATAAGGTCGGCAAGCACGTCCTGCACCAGGCGGTTGGCTT‑CAGCCTGCTTGAGCAAGGCCGGGATCTGGCGAATCGCCAGGGTCTCGGGGCCCAGGCGCTGCAATTCGAAGCCCAGGCGCTGAAACCACTGTGCATGCTCTTCGGca > 2:279512/1‑148 (MQ=255) aGGTCGGCAAGCACGTCCTGCACCAGGCGGTTGGCTT‑CAGCCTGCTTGAGCAAGGCCGGGATCTGGCGAATCGCCAGGGTCTCGGGGCCCAGGCGCTGCAATTCGAAGCCCAGGCGCTGAAACCACTGTGCATGCTCTTCGGCACAGTc < 2:261865/149‑1 (MQ=255) gCAAGCACGTCCTGCACCAGGCGGTTGGCTT‑CAGCCTGCTTGAGCAAGGCCGGGATCTGGCGAATCGCCAGGGTCTCGGGGCCCAGGCGCTGCAATTCGAAGCCCAGGCGCTGAAACCACTGTGCATGCTCTTCGGCACAGTCGGCtcc > 7:283515/1‑147 (MQ=255) aaGCACGTCCTGCACCAGGCGGTTGGCTT‑CAGCCTGCTTGAGCAAGGCCGGGATCTGGCGAATCGCCAGGGTCTCGGGGCCCAGGCGCTGCAATTCGAAGCCCAGGCGCTGAAACCACTGTGCATGCTCTTCGGCACAGTCGGCTTCAc > 7:31465/1‑149 (MQ=255) aaGCACGTCCTGCACCAGGCGGTTGGCTT‑CAGCCTGCTTGAGCAAGGCCGGGATCTGGCGAATCGCCAGGGCCTCGGGGCCCAGGCGCTGCAATTCGAAGCCCAGGCGCTGAAACCACTGTGCATGCTCTTCGGCACAGTCGGCTTCAc > 2:52841/1‑149 (MQ=255) aaGCACGTCCTGCACCAGGCGGTTGGCTT‑CAGCCTGCTTGAGCAAGGCCGGGATCTGGCGAATCGCCAGGGCCTCGGGGCCCAGGCGCTGCAATTCGAAGCCCAGGCGCTGAAACCACTGTGCATGCTCTTCGGCACAGTCGGCTTCAc > 2:57569/1‑149 (MQ=255) gCACGTCCTGCACCAGGCGGTTGGCTT‑CAGCCTGCTTGAGCAAGGCCGGGATCTGGCGAATCGCCAGGGTCTCGGGGCCCAGGCGCTGCAATTCGAAGCCCAGGCGCTGAAACCACTGTGCATGCTCTTCGGCACAGTCGGCTTCACgc > 2:226772/1‑149 (MQ=255) cACGTCCTGCACCAGGCGGTTGGCTT‑CAGCCTGCTTGAGCAAGGCCGGGATCTGGCGAATCGCCAGGGTCTCGGGGCCCAGGCGCTGCAATTCGAAGCCCAGGCGCTGAAACCACTGTGCATGCTCTTCGGCACAGTCGGCTTCACgct < 6:217978/149‑1 (MQ=255) cGTCCTGCACCAGGCGGTTGGCTT‑CAGCCTGCTTGAGCAAGGCCGGGATCTGGCGAATCGCCAGGGTCTCGGGGCCCAGGCGCTGCAATTCGAAGCCCAGGCGCTGAAACCACTGTGCATGCTCTTCGGCACAGTCGGCTTCACgctgg > 6:102528/1‑149 (MQ=255) cACCAGGCGGTTGGCTT‑CAGCCTGCTTGAGCAAGGCCGGGATCTGGCGAATCGCCAGGGTCTCGGGGCCCAGGCTCTGCAATTCCTAGCCCAGGCGCTGAAACCACTGTGCATTCTCTTCGGCACAGTCGGCTTCACGCTGGCTGAg < 7:86688/147‑1 (MQ=255) aCCAGGCGGTTGGCTT‑CAGCCTGCTTGAGCAAGGCCGGGATCTGGCGAATCGCCAGGGTCTCGGGGCCCAGGCGCTGCAATTCGAAGCCCAGGCGCTGAAACCACTGTGCATGCTCTTCGGCACAGTCGGCTTCACGCTGGCTGAGGGc > 8:293515/1‑149 (MQ=255) aGGCGGTTGGCTT‑CAGCCTGCTTGAGCAAGGCCGGGATCTGGCGAATCGCCAGGGTCTCGGGGCCCAGGCGCTGCAATTCGAAGCCCAGGCGCTGAAACCACTGTGCATGCTCTTCGGCACAGTCGGCTTCACGCTGGCTGa > 4:125076/1‑142 (MQ=255) aGGCGGTTGGCTT‑CAGCCTGCTTGAGCAAGGCCGGGATCTGGCGAATCGCCAGGGTCTCGGGGCCCAGGCGCTGCAATTCGAAGCCCAGGCGCTGAAACCACTGTGCATGCTCTTCGGCACAGTCGGCTTCACGCTGGCTGa < 3:125076/142‑1 (MQ=255) aGGCGGTTGGCTT‑CAGCCTGCTTGAGCAAGGCCGGGATCTGGCGAATCGCCAGGGTCTCGGGGCCCAGGCGCTGCAATTCGAAGCCCAGGCGCTGAAACCACTGTGCATGCTCTTCGGCACAGTCGGCTTCACGCTGGCTGAGGGCCAg < 3:250519/149‑1 (MQ=255) aGGCGGTTGGCTT‑CAGCCTGCTTGAGCAAGGCCGGGATCTGGCGAATCGCCAGGGTCTCGGGGCCCAGGCGCTGCAATTCGAAGCCCAGGCGCTGAAACCACTGTGCATGCTCTTCGGCACAGTCGGCTTCACGCTGGCTGAGGGCCAg > 5:17343/1‑149 (MQ=255) ttGGCTT‑CAGCCTGCTTGAGCAAGGCCGGGATCTGGCGAATCGCCAGGGTCTCGGGGCCCAGGCGCTGCAATTCGAAGCCCAGGCGCTGAAACCACTGTGCATGCTCTTCGGCACAGTCGGCTTCACgctggct < 6:116130/134‑1 (MQ=255) ttGGCTT‑CAGCCTGCTTGAGCAAGGCCGGGATCTGGCGAATCGCCAGGGTCTCGGGGCCCAGGCGCTGCAATTCGAAGCCCAGGCGCTGAAACCACTGTGCATGCTCTTCGGCACAGTCGGCTTCACgctggct > 5:116130/1‑134 (MQ=255) cTT‑CAGCCTGCTTGAGCAAGGCCGGGATCTGGCGAATCGCCAGGGTCTCGGGGCCCAGGCGCTGCAATTCGAAGCCCAGGCGCTGAAACCACTGTGCATGCTCTTCGGCACAGTCGGCTTCACGCTGGCTGAGGGCCAGGGTCTCCgg > 2:148783/1‑148 (MQ=255) cTT‑CAGCCTGCTTGAGCAAGGCCAGGATCTGGCGAATCGCCAGGGTCTCGGGGCCCAGGCGCTGCAATTCGAAGCCCAGGCGCTGAAACCACTGTGCATGCTCTTCGGCACAGTCGGCTTCACGCTGGCTGAGGGCCAGAGt < 2:26571/142‑1 (MQ=255) cTT‑CAGCCTGCTTGAGCAAGGCCAGGATCTGGCGAATCGCCAGGGTCTCGGGGCCCAGGCGCTGCAATTCGAAGCCCAGGCGCTGAAACCACTGTGCATGCTCTTCGGCACAGTCGGCTTCACGCTGGCTGAGGGCCAGAGt > 1:26571/1‑142 (MQ=255) cAGCCTGCTTGAGCAAGGCCGGGATCTGGCGAATCGCCAGGGTCTCGGGGCCCAGGCGCTGCAATTCGAAGCCCAGGCGCTGAAACCACTGTGCATGCTCTTCGGCACAGTCGGCTTCACGCTGGCTGAGGGCCAGGGTCTCCGGCAc < 8:79253/148‑1 (MQ=255) aGCCTGCTTGAGCAAGGCCGGGATCTGGCGAATCGCCAGGGTCTCGGGGCCCAGGCGCTGCAATTCGAAGCCCAGGCGCTGAAACCACTGTGCATGCTCTTCGGCACAGTCGGCTTCACGCTGGCTGAGGGCCAGGGTCTCCGGCACca < 7:293515/149‑1 (MQ=255) ccTGCTTGAGCAAGGCCGGGATCTGGCGAATCGCCAGGGTCTCGGGGCCCAGGCGCTGCAATTCGAAGCCCAGGCGCTGAAACCACTGTGCATGCTCTTCGGCACAGTCGGCTTCACGCTGGCTGAGGGCCAgg > 6:54636/1‑134 (MQ=255) ccTGCTTGAGCAAGGCCGGGATCTGGCGAATCGCCAGGGTCTCGGGGCCCAGGCGCTGCAATTCGAAGCCCAGGCGCTGAAACCACTGTGCATGCTCTTCGGCACAGTCGGCTTCACGCTGGCTGAGGGCCAgg < 5:54636/134‑1 (MQ=255) ccTGCTTGAGCAAGGCCGGGATCTGGCGAATCGCCAGGGTCTCGGGGCCCAGGCGCTGCAATTCGAAGCCCAGGCGCTGAAACCACTGTGCATGCTCTTCGGCACAGTCGGCTTCACGCTGGCTGAGGGCCAGGGTCTcc > 4:31747/1‑140 (MQ=255) ccTGCTTGAGCAAGGCCGGGATCTGGCGAATCGCCAGGGTCTCGGGGCCCAGGCGCTGCAATTCGAAGCCCAGGCGCTGAAACCACTGTGCATGCTCTTCGGCACAGTCGGCTTCACGCTGGCTGAGGGCCAGGGTCTcc < 3:31747/140‑1 (MQ=255) gCTTGAGCAAGGCCGGGATCTGGCGAATCGCCAGGGTCTCGGGGCCCAGGCTCTGCAATTCGAAGCCCAGGCGCTGAAACCACTGTGCATGCTCTTCGGCACAGTCGGCTTCACGCTGGCTGAGGGCCAGGGTCTCCGGCACca < 8:80503/144‑1 (MQ=255) gCTTGAGCAAGGCCGGGATCTGGCGAATCGCCAGGGTCTCGGGGCCCAGGCGCTGCAATTCGAAGCCCAGGCGCTGAAACCACTGTGCATGCTCTTCGGCACAGTCGGCTTCACGCTGGCTGAGGGCCAGGGTCTCCGGCACca > 7:80503/1‑144 (MQ=255) tGAGCAAGGCCGGGATCTGGCGAATCGCCAGGGTCTCGGGGCCCAGGCGCTGCAATTCGAAGCCCAGGCGCTGAAACCACTGTGCATGCTCTTCGGCACAGTCGGCTTCACGCTGGCTGAGGGCCAGGGTCTCCGGCACCAGCAGCGGc > 1:113394/1‑149 (MQ=255) aGCAAGGCCGGGATCTGGCGAATCGCCAGGGCCTCGGGGCCCAGGCGCTGCAATTCGAAGCCCAGGCGCTGAAACCACTGTGCATGCTCTTCGGCACAGTCGGCTTCACGCTGGCTGAGGGCCAGGGTCTCCGGCACCAGCAGCGGCTg < 1:57569/149‑1 (MQ=255) aGCAAGGCCGGGATCTGGCGAATCGCCAGGGCCTCGGGGCCCAGGCGCTGCAATTCGAAGCCCAGGCGCTGAAACCACTGTGCATGCTCTTCGGCACAGTCGGCTTCACGCTGGCTGAGGGCCAGGGTCTCCGGCACCAGCAGCGGCTg < 1:52841/149‑1 (MQ=255) gCAAGGCCGGGATCTGGCGAATCGCCAGGGTCTCGGGGCCCAGGCGCTGCAATTCGAAGCCCAGGCGCTGAAACCACTGTGCATGCTCTTCGGCACAGTCGGCTTCACGCTGGCTGAGGGCCAGGGTCTCCGGCACCAGCAGCGGCTgg < 3:216704/149‑1 (MQ=255) aGGCCGGGATCTGGCGAATCGCCAGGGTCTCGGGGCCCAGGCGCTGCAATTCGAAGCCCAGGCGCTGAAACCACTGTGCATGCTCTTCGGCACAGTCGGCTTCACGCTGGCTGAGGGCCAGGGTCTCCGGCACCAGCAGCGGCTGGCCg > 6:218494/1‑149 (MQ=255) gCCGGGATCTGGCGAATCGCCAGGGTCTCGGGGCCCAGGCGCTGCAATTCGAAGCCCAGGCGCTGAAACCACTGTGCATGCTCTTCGGCACAGTCGGCTTCACGCTGGCTGAGGGCCAGGGTCTCCGGCACCAGCAGCGGCTGGCCGCt > 3:179430/1‑149 (MQ=255) gggATCTGGCGAATCGCCAGGGTCTCGGGGCCCAGGCGCTGCAATTCGAAGCCCAGGCGCTGAAACCACTGTGCATGCTCTTCGGCACAGTCGGCTTCACGCTGGCTGAGGGCCAGGGTCTCCGGCACCAGCAGCGGCTGGCCGCTCAg < 5:328769/149‑1 (MQ=255) ggATCTGGCGAATCGCCAGGGTCTCGGGGCCCAGGCGCTGCAATTCGAAGCCCAGGCGCTGAAACCACTGTGCATGCTCTTCGGCACAGTCGGCTTCACGCTGGCTGAGGGCCAGGGTCTCCGGCACCAGCAGCGGCTGGCCGCTCAgg < 7:210940/149‑1 (MQ=255) ggAGCTGGCGAATCGCCAGGGTCTCGGGGCCCAGGCGCTGCAATTCGAAGCCCAGGCGCTGAAACCACTGTGCATGCTCTTCGGCACAGTCGGCTTCACGCTGGCTGAGGGCCAGGGTCTCCGGCACCAGCAGCGGCTGGCCGCTCAgg < 5:163815/149‑1 (MQ=255) gATCTGGCGAATCGCCAGGGTCTCGGGGCCCAGGCGCTGCAATTCGAAGCCCAGGCGCTGAAACCACTGTGCATGCTCTTCGGCACAGTCGGCTTCACGCTGGCTGAGGGCCAGGGTCTCCGGCACCAGCAGCGGCTGGCCGCTCAGGc < 2:67186/149‑1 (MQ=255) aTCTGGCGAATCGCCAGGGTCTCGGGGCCCAGGCGCTGCAATTCGAAGCCCAGGCGCTGAAACCACTGTGCATGCTCTTCGGCACAGTCGGCTTCACGCTGGCTGAGGGCCAGGGTCTCCGGCACCAGCAGCGGCTGGCCGCTCAGGcc > 4:48266/1‑149 (MQ=255) tGGCGAATCGCCAGGGTCTCGGGGCCCAGGCGCTGCAATTCGAAGCCCAGGCGCTGAAACCACTGTGCATGCTCTTCGGCACAGTCGGCTTCACGCTGGCTGAGGGCCAGGGTCTCCGGCACCAGCAGCGGCTGGCCGCTCAGGCCCTc > 4:120672/1‑149 (MQ=255) gCGAATCGCCAGGGTCTCGGGGCCCAGGCGCTGCAATTCGAAGCCCAGGCGCTGAAACCACTGTGCATGCTCTTCGGCACAGTCGGCTTCACGCTGGCTGAGGGCCAGGGTCTCCGGCACCAGCAGCGGCTGGCCGCTCAGGCCCt < 3:113074/146‑1 (MQ=255) gCGAATCGCCAGGGTCTCGGGGCCCAGGCGCTGCAATTCGAAGCCCAGGCGCTGAAACCACTGTGCATGCTCTTCGGCACAGTCGGCTTCACGCTGGCTGAGGGCCAGGGTCTCCGGCACCAGCAGCGGCTGGCCGCTCAGGCCCTCGc > 7:279959/1‑149 (MQ=255) gCGAATCGCCAGGGTCTCGGGGCCCAGGCGCTGCAATTCGAAGCCCAGGCGCTGAAACCACTGTGCATGCTCTTCGGCACAGTCGGCTTCACGCTGGCTGAGGGCCAGGGTCTCCGGCACCAGCAGCGGCCAGCCGCtgctggt < 1:148783/144‑7 (MQ=255) gAATCGCCAGGGTCTCGGGGCCCAGGCGCTGCAATTCGAAGCCCAGGCGCTGAAACCACTGTGCATGCTCTTCGGCACAGTCGGCTTCACGCTGGCTGAGGGCCAGTGTCTCCGGCACCAGCAGCGGCTGGCCGCTCAGGCCCTCGCtg < 1:226772/149‑1 (MQ=255) tCGCCAGGGTCTCGGGGCCCAGGCGCTGCAATTCGAAGCCCAGGCGCTGAAACCACTGTGCATGCTCTTCGGCACAGTCGGCTTCACGCTGGCTGAGGGCCAGGGTCTCCGGCACCAGCAGCGGCTGGCCGCTCAGGCCCTCGCtggcc < 5:102528/149‑1 (MQ=255) cGCCTGGGCCCCGAGACCCTGGCGCTGCAATTCGAAGCCCAGGCGCTGAAACCACTGTGCATGCTCTTCGGCACAGTCGGCTTCACGCTGGCTGAGGGCCAGGGTCTCCGGCACCAGCAGCGGCTGGCCGCTCAGGCCCTCGCtggcca > 3:27494/1‑149 (MQ=255) cGCCTGGGCCCCGAGACCCTGGCGCTGCAATTCGAAGCCCAGGCGCTGAAACCACTGTGCATGCTCTTCGGCACAGTCGGATTAACGCTGGATGAGGGCCAGGGTCTCCGGCCCCAGCAGCGGCTGGCCGCTCCGGCCAGCGCtggcca > 4:219449/1‑149 (MQ=255) gCCAGGGTCTCGGGGCCCAGGCGCTGCAATTCGAAGCCCAGGCGCTGAAACCACTGTGCATGCTCTTCGGCACAGTCGGCTTCACGCTGGCTGAGGGCCAGGGTCTCCGGCACCAGCAGCGGCTGGCCGCTCAGGCCCTCGCtggccat < 8:279959/149‑1 (MQ=255) gCCAGGGTCTCGGGGCCCAGGCGCTGCAATTCGAAGCCCAGGCGCTGAAACCACTGTGCATGCTCTTCGGCACAGTCGGCTTCACGCTGGCTGAGGGCCAGGGTCTCCGGCACCAGCAGCGGCTGGCCGCTCAGGCCCTCGCtggccat < 5:218494/149‑1 (MQ=255) ccAGGGTCTCGGGGCCCAGGCGCTGCAATTCGAAGCCCAGGCGCTGAAACCACTGTGCATGCTCTTCGGCACAGTCGGCTTCACGCTGGCTGAGGGCCAGGGTCTCCGGCACCagcagc > 2:85816/1‑119 (MQ=255) cAGGGTCTCGGGGCCCAGGCGCTGCAATTCGAAGCCCAGGCGCTGAAACCACTGTGCATGCTCTTCGGCACAGTCGGCTTCACGCTGGCTGAGGGCCAGGGTCTCCGGCACCAGCAGCGGCTGGCCGCTCAGGCCCTCGCtggccatgg < 2:113394/149‑1 (MQ=255) tctcGGGGCCCAGGCGCTGCAATTCGAAGCCCAGGCGCTGAAAACACAGTGCATGCTCATCGGCACAGTCGGCTTCACCCAGGCTGAGGGCCAGGGTGTCCGGCACCCGCAGCGGCTGGCCGCGAGGGCGCTCGCtgggcgtggggggg > 4:255614/1‑144 (MQ=255) tcGGGGCCCAGGCGCTGCAATTCGAAGCCCAGGCGCTGAAACCACTGTGCATGCTCTTCGGCACAGTCGGCTTCACGCTGGCTGAGGGCCAGGGTCTCCGGCACCAGCAGCGGCTGGCCGCTCAGGCCCTCGCTGGCCATGGCCACCtt > 8:169/1‑149 (MQ=255) | AGCAGCTCATTGAGGTGCGCCTGAATGCGATCACTGGTGCCGTACTCCATAAGGTCGGCAAGCACGTCCTGCACCAGGCGGTTGGCTT‑CAGCCTGCTTGAGCAAGGCCGGGATCTGGCGAATCGCCAGGGTCTCGGGGCCCAGGCGCTGCAATTCGAAGCCCAGGCGCTGAAACCACTGTGCATGCTCTTCGGCACAGTCGGCTTCACGCTGGCTGAGGGCCAGGGTCTCCGGCACCAGCAGCGGCTGGCCGCTCAGGCCCTCGCTGGCCATGGCCACCTT > NC_002947/5565768‑5566048 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |