| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,944,535 | C→T | 7.8% | intergenic (‑301/+39) | PP_5211 ← / ← PP_5212 | ChaC‑related protein/iron‑sulfur‑binding oxidoreductase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,944,535 | 0 | C | T | 7.8% | 182.1 / 4.1 | 64 | intergenic (‑301/+39) | PP_5211/PP_5212 | ChaC‑related protein/iron‑sulfur‑binding oxidoreductase |
| Reads supporting (aligned to +/- strand): ref base C (27/32); new base T (3/2); total (30/34) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.59e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.83e-01 | |||||||||||
GGCCGCTTTACCAAGGGCGCTTGCGGTAACCATAGGCCAGAATTGCAGGAATACTCAAGCCCTTGAGCACGCGTTTCATACACGGCTCCGACGACTGGGAAGTACTGTTTCAGCAGCGGTGAAAGTTATTGGCCAAGGCGGTAACAATTACCGCCTTATACCGATACTTTCAAACTTCGGTTATTAACCGCGCGGCGCGTAGGCAAACACATCGGCACGCATGCGGTGCGCATCCATACCGGCTTCGACCAGGGCGTCGAGCGTGGCATAGATCATGTTCGGTGAGCCGCTGG > NC_002947/5944391‑5944683 | ggCCGCTTTACCAAGGGCGCTTGCGGTAACCATAGGCCAGAATTGCAGGAATACTCAAGCCCTTGAGCACGCGTTTCATACACGGCTCCGACGACTGGGAAGTACTGTTTCAGCAGCGGTGAAAGTTATTGGCCAAGGCGGTAACAAtt < 1:212796/149‑1 (MQ=255) gcggCTTTACCAAGGGCGCTTGCGGTAACCATTGGCCAGAATTGCAGGAAGACTCAAGCGCTTCAGCACGAGTTTCATGAACGGCTCCGACGACTGGGAAGTAGTGGGTGGGCAGCGCGGAAACTTATTGGCGAAGGCGGTATCatct > 8:228746/4‑145 (MQ=255) tttACCAAGGGCGCTTGCGGTAACCATAGGCCAGAATTGCAGGAATACTCAACCCCTTGAGCACGCGTTTCATACACGGCTCCGACGACAGGGAAGTACTGTTTCAGCAGCGGTCAAAGTTATTGGCCAAGGCGGTAACAATTACCGcc > 4:135347/1‑149 (MQ=255) tACCAAGGGCGCTTGCGGTAACCATAGGCCAGAATTGCAGGAATACTCAAGCCCTTGAGCACGCGTTTCATACACGGCTCCGACGACTGGGAAGTACTGTTTCAGCAGCGGTGAAAGTTATTGGCCAAGGCGGTAACAATTACCGCCt < 8:114284/148‑1 (MQ=255) aCCAAGGGCGCTTGCGGTAACCATAGGCCAGAATTGCAGGAATACTCAAGCCCTTGAGCACGCGTTTCATACACGGCTCCGACGACTGGCAAGTACTGTTTCAGCAGCGGTGAAAGTTATTGGCCAAGGCGGTAACAATTACCGCCTta > 5:161114/1‑149 (MQ=255) ccAAGGGCGCTTGCGGTAACCATAGGCCAGAATTGCAGGAATACTCAAGCCCTTGAGCACGCGTTTCATACACGGCTCCGACGACTGGGAAGTACTGTTTCAGCAGCGGTGAAAGTTATTGGCCAAGGCGGTAATTGTTACCGCCttgg < 4:54550/149‑3 (MQ=255) aaGGGCGCTTGCGGTAACCATAGGCCAGAATTGCAGGAATACTCAAGCCCTTGAGCACGCGTTTCATACACGGCTCCGACGACTGGGAAGTACTGTTTCAGCAGCGGTGAAAGTTATTGGCCAAGGCGGTAACAATTACCGCCTTATAc < 6:161114/149‑1 (MQ=255) ggCGCTTGCGGTAACCATAGCCCAGAATTGCAGCAATACTCAAGCCCTTGAGCACGCTTTTCATACACGGCTCCGACGACTGGGAAGTACTTTTTCAGCAGCGTTTAAAGTTATTGGCCAAGGCGGTAACAATTACCGCCTTATACCGa < 4:229214/149‑1 (MQ=255) gcTTGCGGTAACCATAGGCCAGAATTGCAGGAATACTCAAGCCCTTGAGCACGCGTTTCATACACGGCTCCGACGACTGGGAAGTACTGTTTCAGCAGCGGTGAAAGTTATTGGCCAAGGCGGTAACAATTACCGCCTTATACCGATAc > 4:233509/1‑149 (MQ=255) gCGGTAACCATAGGCCAGAATTGCAGGAATACTCAAGCCCTTGAGCACGCGTTTCATACACGGCTCCGACGACTGGGAAGTACTGTTTCAGCAGCGGTGAAAGTTATTGGCCAAGGCGGTAACAATTACCGCCTTATACCGATACtt < 6:116842/147‑1 (MQ=255) gCGGTAACCATAGGCCAGAATTGCAGGAATACTCAAGCCCTTGAGCACGCGTTTCATACACGGCTCCGACGACTGGGAAGTACTGTTTCAGCAGCGGTGAAAGTTATTGGCCAAGGCGGTAACAATTACCGCCTTATACCGATACtt < 3:96341/147‑1 (MQ=255) cGGTAACCATAGGCCAGAATTGCAGGAATACTCAAGCCCTTGAGCACGCGTTTCATACACGGCTCCGACGACTGGGAAGTACTGTTTCAGCAGCGGTGAAAGTTATTGGCCAAGGCGGTAACAATTACCGCCTTATACCGATACTTTc < 3:233509/148‑1 (MQ=255) cGGTAACCATAGGCCAGAATTGCAGGAATACTCAAGCCCTTGAGCACGCGTTTCATACACGGCTCCGACGACTGGGAAGTACTGTTTCAGCAGCGGTGAAAGTTATTGGCCAAGGCGGTAACAATTACCGCCTTATACCGATACTTTc < 7:106681/148‑1 (MQ=255) ccATAGGCCAGAATTGCAGGAATACTCAAGCCCTTGAGCACGCGTTTCATACACGGCTCCGACGACTGGGAAGTACTGTTTCAGCAGCGGTGAAAGTTATTGGCCAAGGCGGTAACAATTACCGCCTTATACCGATACTTTCAAACTTc > 7:263264/1‑149 (MQ=255) cATAGGCCAGAATTGCAGGAATACTCAAGCCCTTGAGCACGCGTTTCATACACGGCTCCGACGACTGGGAAGTACTGTTTCAGCAGCGGTGAAAGTTATTGGCCAAGGCGGTAACAATTa > 2:326203/1‑120 (MQ=255) cATAGGCCAGAATTGCAGGAATACTCAAGCCCTTGAGCACGCGTTTCATACACGGCTCCGACGACTGGGAAGTACTGTTTCAGCAGCGGTGAAAGTTATTGGCCAAGGCGGTAACAATTa < 1:326203/120‑1 (MQ=255) cATAGGCCAGAATTGCAGGAATACTCAAGCCCTTGAGCACGCGTTTCATACACGGCTCCGACGACTGGGAAGTACTGTTTCAGCAGCGGTGAAAGTTATTGGCCAAGGCGGTAACAATTACCGCCTTATACCGATACTTTCAAACTTCg > 2:164759/1‑149 (MQ=255) cATAGGCCAGAATTGCAGGAATACTCAAGCCCTTGAGCACGCGTTTCATACACGGCTCCGACGACTGGGAAGTACTGTTTCAGCAGCGGTGAAAGTTATTGGCCAAGGCGGTAACAATTACCGCCTTATACCGATACTTTCAAACTTCg > 1:283092/1‑149 (MQ=255) ggCCAGAATTGCAGGAATACTCAAGCCCTTGAGCACGCGTTTCATACACGGCTCCGACGACTGGGAAGTACTGTTTCAGCAGCGGTGAAAGTTATTGGCCAAGGCGGTAACAATTACCGCCTTATACCGATACTTTCAAACTTCGGtt < 1:305345/148‑1 (MQ=255) gCCAGAATTGCAGGAATACTCAAGCCCTTGAGCACGCGTTTCATAAACGGCTCCGACGACTGGGAAGTACTGTTTCAGCAGCGGTGAAAGTTATTGGCCAAGGCGGTAACAATTACCGCCTTATACCGATACTTTCAAACTTCGGttat > 2:218108/1‑149 (MQ=255) ccAGAATTGCAGGAATACTCAAGCCCTTGAGCACGCGTTTCATACACGGCTCCGACGACTGGGAAGTACTGTTTCAGCAGCGGTGAAAGTTATTGGCCAAGGCGGTAACAATTACCGCCTTATACCGATACTTTCAAACTTCGGttatt < 8:263264/149‑1 (MQ=255) ccAGAATTGCAGGAATACTCAAGCCCTTGAGCACGCGTTTCATACACGGCTCCGACGACTGGGAAGTACTGTTTCAGCAGCGGTGAAAGTTATTGGCCAAGGCGGTAACAATTACCGCCTTATACCGATACTTTCAAACTTCGGttat > 5:322437/1‑148 (MQ=255) gAATACTCAAGCCCTTGAGCACGCGTTTCATACACGGCTCCGACGACTGGGAAGTACTGTTTCAGCAGCGGTGAAAGTTATTGGCCAAGGCGGTAACAATTACCGCCTTATACCGATACTTTCAAACTTCGGTTATTAACCgcgcggcg > 3:28478/1‑149 (MQ=255) aaGCCCTTGAGCACGCGTTTCATACACGGCTCCGACGACTGGGAAGTACTGTTTCAGCAGCGGTGAAAGTTATTGGCCAAGGCGGTAACAATTACCGCCTTATACCGATACTTTCAAACTTCGGTTATTAACCGCGCGGCGCGTAGGCa < 2:283092/149‑1 (MQ=255) cACGCGTTTCATACACGGCTCCGACGACTGGGAAGTACTGTTTCAGCAGCGGTGAAAGTTATTGGCCAAGGCGGTAACAATTACCGCCTTATACCGATACTTTCAAACTTCGGTTATTAACCGCGCGGCGCGTAGGCAAACACATCGGc < 1:227429/149‑1 (MQ=255) cgcgTTTCATACACGGCTCCGACGACTGGGAAGTACTGTTTCAGCAGCGGTGAAAGTTATTGGCCAAGGCGGTAACAATTACCGCCTTATACCGATACTTTCAAACTTCGGTTATTAACCGCGCGGCGCGTAGGCAAACACATCGGCAc < 4:173273/149‑1 (MQ=255) cacGGCTCCGACGACTGGGAAGTACTGTTTCAGCAGCGGTGAAAGTTATTGGCCAAGGCGGTAACAATTACCGCCTTATACCGATACTTTCAAACTTCGGTTATTAACCGCGCGGCGCGTAGGCAAACACATCGGCACGCATGCGGttc > 3:258898/1‑147 (MQ=255) acGGCTCCGACGACTGGGAAGTACTGTTTCAGCAGCGGTGAAAGTTATTGGCCAAGGCGGTAACAATTACCGCCTTATACCGATACTTTCAAACTTCGGTTATTAACCGCGCGGCGCGTAGGCAAACACATCGGCACGCATGCGGTgcg > 2:171747/1‑149 (MQ=255) cGGCTCCGACGACTGGGAAGTACTGTTTCAGCAGCGGTGAAAGTTATTGGCCAAGGCGGTAACAATTACCGCCTTATACCGATACTTTCAAACTTCGGTTATTAACCGCGCGGCGCGTAGGCAAACACATCGGCACGCAtgcgctgcgc < 7:292294/149‑1 (MQ=255) gacTGGGAAGTACTGTTTCAGCAGCGGTGAAAGTTATTGGCCAAGGCGGTAACAATTACCGCCTTATACCGATACTTTCAAACTTCGGTTATTAACCGCGCGGCGCGTAGGCAAACACATCGGCACGCATGc < 7:288179/132‑1 (MQ=255) gacTGGGAAGTACTGTTTCAGCAGCGGTGAAAGTTATTGGCCAAGGCGGTAACAATTACCGCCTTATACCGATACTTTCAAACTTCGGTTATTAACCGCGCGGCGCGTAGGCAAACACATCGGCACGCATGc > 8:288179/1‑132 (MQ=255) cTGGGAAGTACTGTTTCAGCAGCGGTGAAAGTTATTGGCCAAGGCGGTAACAATTACCGCCTTATACCGATACTTTCAAACTTCGGTTATTAACCGCGCGGCGCGTAGGCAAACACATCGGCACGCATGCGGTGCGCATCCATACCGGc > 5:18465/1‑149 (MQ=255) tGGGAAGTACTGTTTCAGCAGCGGTGAAAGTTATTGGCCAAGGCGGTAACAATTACCGCCTTATACCGATACTTTCAAACTTCGGTTATTAACCGCGCGGCGCGt > 5:196633/1‑105 (MQ=255) tGGGAAGTACTGTTTCAGCAGCGGTGAAAGTTATTGGCCAAGGCGGTAACAATTACCGCCTTATACCGATACTTTCAAACTTCGGTTATTAACCGCGCGGCGCGt < 6:196633/105‑1 (MQ=255) ggAAGTACTGTTTCAGCAGCGGTGAAAGTTATTGGCCAAGGCGGTAACAATTACCGCCTTATACCGATACTTTCAACCTTCGGTTATTAACCGCGCGGCGCGTAGGCAAACACATCGGCACGCATGCGGTGCGCATCCATACCGGCTTc > 8:146512/1‑149 (MQ=255) gAAGTACTGTTTCAGCAGCGGTGAAAGTTATTGGCCAAGGCGGTAACAATTACCGCCTTATACCGATACTTTCAAACTTCGGTTATTAACCGCGCGGCGCGTAGGCAAACACATCGGCACGCATGCGGTGCGCATCCATACCGGCTTCg < 3:135347/149‑1 (MQ=255) aCTGTTTCAGCAGCGGTGAAAGTTATTGGCCAAGGCGGTAACAATTACCGCCTTATACCGATACTTTCAAACTTCGGTTATTAACAGCGCGGCGCGTAGGCAAACACATCGGCACGCATGCGGTGCGCATCCATACAGGATTCGACCAg > 8:297752/1‑149 (MQ=255) cTGTTTCAGCAGCGGTGAAAGTTATTGGCCAAGGCGGTAACAATTACCGCCTTATACCGATACTTTCAAACTTCGGTTATTAACCGCGCGGCGCGTAGGCAAACACATCGGCACGCATGCGGTGCGCATCCATACCGGCTTCGACCAgg < 3:41040/149‑1 (MQ=255) tGTTTCAGCAGCGGTGAAAGTTATTGGCCAAGGCGGTAACAATTACCGCCTTATACCGATACTTTCAAACTTCGGTTATTAACCGCGCGGCGCGTAGGCAAACACATCGGCACGCATGCGGTGCGCATCCATACCGGCTTCGACCAggg > 2:325172/1‑149 (MQ=255) tttCAGCAGCGGTGAAAGTTATTGGCCAAGGCGGTAACAATTACCGCCTTATACCGATACTTTCAAACTTCGGTTATTAACCgcgcgg < 1:78606/88‑1 (MQ=255) attCAGCAGCGGTGAAAGTTATTGGCCAAGGCGGTAACAATTACCTCCTTATTCCGATACTTTCAAACTTCGGTTTTTAACCGCGCGGCGCGTAGGCAAACACATCGGCACGCATGCGGTGCGCATCCATACCGGCTTCGACCAgg < 8:119614/145‑1 (MQ=255) gcGGTGAAAGTTATTGGCCAAGGCGGTAACAATTACCGCCTTATACCGATACTTTCAAACTTCGGTTATTAACCGCGCGGCGCGTAGGCAAACACATCGGCACGCATGCGGTGCGCATCCATACCGGCTTCGACCAGGGCGTCGAGCGt > 8:35919/1‑149 (MQ=255) cGGTGAAAGTTATTGGCCAAGGCGGTAACAATTACCGCCTTATACCGATACTTTCAAACTTCGGTTATTAACCGCGCGGCGCGTAGGCAAACACATCGGCACGCATGCGGTGCGCATCCATACCGGCTTCGACCAGGGCGTCGAGCGTg < 6:169132/149‑1 (MQ=255) tGAAAGTTATTGGCCAAGGCGGTAACAATTACCGCCTTATACCGATACTTTCAAACTTCGGTTATTAACCGCGCGGCGCGTAGGCAAACACATCGGCACGCATGCGGTGCGCATCCATACCGGCTTCGACCAGGGCGTCGAGCGTGGCa > 3:222695/1‑149 (MQ=255) aaaGTTATTGGCCAAGGCGGTAACAATTACCGCCTTATACCGATACTTTCAAACTTCGGTTATTAACCGCGCGGCGCGTAGGCAAACACATCGGCACGCATGCGGTGCGCATGCATACCGGCTTCGACCAGGGCGTCGAGCGTGGCATa < 1:218108/149‑1 (MQ=255) aaaGTTATTGGCCAAGGCGGTAACAATTACCGCCTTATACCGATACTTTCAAACTTCGGTTATTAACCGCGCGGCGCGTAGGCAAACACATCGGCACGCATGCGGTGCGCATCCATACCGGCTTCGACCAGGGCGTCGAGCGTGGCa > 2:235471/1‑147 (MQ=255) ttATTGGCCAAGGCGGTAACAATTACCGCCTTATACCGATACTTTCAAACTTCGGTTATTAACCGCGCGGCGCGTAGGCAAACACATCGGCACGCATGCGGTGCGCATCCATACCGGCTTCGACCAGGGCGTCGAGCGTGGCATAGATc < 3:269754/149‑1 (MQ=255) aTTGGCCAAGGCGGTAACAATTACCGCCTTATACCGATACTTTCAAACTTCGGTTATTAACCGCGCGGCGCGTAGGCAAACACAt > 7:212711/1‑85 (MQ=255) aTTGGCCAAGGCGGTAACAATTACCGCCTTATACCGATACTTTCAAACTTCGGTTATTAACCGCGCGGCGCGTAGGCAAACACAt < 8:212711/85‑1 (MQ=255) aTTGGCCAAGGCGGTAACAATTACCGCCTTATACCGATACTTTCAAACTTCGGTTATTAACCGCGCGGCGCGTAGGCAAACACATCGGCACGCATGCGGTGCGCATCCATACCGGCTTCGACCAgg > 7:70192/1‑126 (MQ=255) aTTGGCCAAGGCGGTAACAATTACCGCCTTATACCGATACTTTCAAACTTCGGTTATTAACCGCGCGGCGCGTAGGCAAACACATCGGCACGCATGCGGTGCGCATCCATACCGGCTTCGACCAgg < 8:70192/126‑1 (MQ=255) ttGGCCAAGGCGGTAACAATTACCGCCTTATACCGATACTTTCAAACTTCGGtta < 2:6766/55‑1 (MQ=255) ttGGCCAAGGCGGTAACAATTACCGCCTTATACCGATACTTTCAAACTTCGGtta > 1:6766/1‑55 (MQ=255) ttGGCCAAGGCGGTAACAATTACCGCCTTATACCGATACTTTCAAACTTCGGTTATTAACCGCGCGGCGCGTAGGCAAACACATCGGCACGCATGCGGTTCGCATCCATACCGGCTTCGACCAGGGCGTCGAGCGTGGCATAGATCAt < 4:258898/148‑1 (MQ=255) gCCAAGGCGGTAACAATTACCGCCTTATACCGATACTTTCAAACTTCGGTTATTAACCGCGCGGCGCGTAGGCAAACACATCGGCACGCATGCGGTGCGCATCCATACCGGCTTCGACCAGGGCGTCGAGCGTGGCATAGATCATGTTc > 8:287583/1‑149 (MQ=255) aaGGCGGTAATTGTTACCGCCTTATACCGATACTTTCAAACTTCGGTTATTAACCGCGCGGCGCGTAGGCAAACACATCGGCACGCATGCGGTGCGCATCCATACCGGCTTCGACCAGGGCGTCGAGCGTGGCATAGATCATGTTCGGt > 7:35367/1‑149 (MQ=255) aaGGCGGTAACAATTACCGCCTTATACCGATACTTTCAAACTTCGGTTATTAACCGCGCGGCGCGTAGGCAAACACATCGGCACGCATGCGGTGCGCATCCATACCGGCTTCGACCAGGGCGTCGAGCGTGGCATAGATCATGTTCGGt > 8:205290/1‑149 (MQ=255) aaGGCGGTAACAATTACCGCCTTATACCGATACTTTCAAACTTCGGTTATTAACCGCGCGGCGCGTAGGCAAACACATCGGCACGCATGCGGTGCGCATCCATACCGGCTTCGACCAGGGCGTCGAGCGTGGCATAGATCATGTTCGGt < 4:28478/149‑1 (MQ=255) ggCGGTAATTGTTACCGCCTTATACCGATACTTTCAAACTTCGGTTATTAACCGCGCGGCGCGTAGGCAAACACATCGGCACGCATGCGGTGCGCATCCATACCGGCTTCGACCAGGGCGTCGAGCGTgg < 6:238272/130‑1 (MQ=255) ggCGGTAATTGTTACCGCCTTATACCGATACTTTCAAACTTCGGTTATTAACCGCGCGGCGCGTAGGCAAACACATCGGCACGCATGCGGTGCGCATCCATACCGGCTTCGACCAGGGCGTCGAGCGTgg > 5:238272/1‑130 (MQ=255) ggCGGTAATTGTTACCGCCTTATACCGATACTTTCAAACTTCGGTTATTAACCGCGCGGCGCGTACGCAAACACATCGGCACGCATGCGGTGCGAATCCATACCGGCTACGACCAGGCCGTCGAGCGTGGCATAGATCATGTTCGGTGa > 7:199561/1‑149 (MQ=255) ggCGGTAACAATTACCGCCTTATACCGATACTTTCAAACTTCGGTTATTAACCGCGCGGCGCGTAGGCAAACACATCGGCACGCATGCGGTGCGCATCCATACCGGCTTCGACCAGGGCGTCGAGCGTGGCATAGATCATGTTCGGTGa < 6:322437/149‑1 (MQ=255) aCAATTACCGCCTTATACCGATACTTTCAAACTTCGGTTATTAACCGCGCGGCGCGTAGGCAAACACATCGGCACGCATGCGGTGCGCATCCATACCGGCTTCGACCAGGGCGTCGAGCGTGGCATAGATCATGTTCGGTGAGCCGCt < 1:171747/148‑1 (MQ=255) aCAATTACCGCC‑TATACCGATACTTTCAAACTTCGGTTATTAACCGCGCGGCGCGTAGGCAAACACATCGGCACGCATGCGGTGCGCATCCATACCGGCTTCGACCAGGGCGTCGAGCGTGGCATAGATCATGTTCGGTGAGCCGCTg < 1:129633/148‑1 (MQ=255) cAATTACCGCCTTATACCGATACTTTCAAACTTCTGTTATTAACCGCGCGGCGCGTAGTCAAACACATCGGCACGCATGCGGTGCGCATCCATACCGGCTTCGACCAGGGCGTCGAGCGTGGGATAGATCATGTTCGGTGAGCCGCTgg < 7:228746/149‑1 (MQ=255) cAATTACCGCCTTATACCGATACTTTCAAACTTCGGTTATTAACCGCGCGGCGCGTAGGCAAACACATCGGCACGCATGCGGTGCGCATCCATACCGGCTTCGACCAGGGCGTCGAGCGTGGCATAGATCATGTTCGGTGAGCCGCTgg < 6:18465/149‑1 (MQ=255) | GGCCGCTTTACCAAGGGCGCTTGCGGTAACCATAGGCCAGAATTGCAGGAATACTCAAGCCCTTGAGCACGCGTTTCATACACGGCTCCGACGACTGGGAAGTACTGTTTCAGCAGCGGTGAAAGTTATTGGCCAAGGCGGTAACAATTACCGCCTTATACCGATACTTTCAAACTTCGGTTATTAACCGCGCGGCGCGTAGGCAAACACATCGGCACGCATGCGGTGCGCATCCATACCGGCTTCGACCAGGGCGTCGAGCGTGGCATAGATCATGTTCGGTGAGCCGCTGG > NC_002947/5944391‑5944683 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |