Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 467,968 G→A 6.2% L997L (CTG→TTG)  PP_0386 ← sensory box protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_002947467,9680GA 6.2% 241.4 / 3.4 80L997L (CTG→TTG) PP_0386sensory box protein
Reads supporting (aligned to +/- strand):  ref base G (41/34);  new base A (2/3);  total (43/37)
Fisher's exact test for biased strand distribution p-value = 6.58e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.59e-01

CCGAGCTGCAGGATGGTGCCGTTCTCTTCCGCCAAGTGGATGAAGTGTTCCGGCGGTACCTCGCCAAAGGTCGGGTGGCTCCAGCGGATCAGCGCTTCGGCACCCACCAGGCTCTGGGTCTTCAGGCTGAGCTTGGGCTGGAAGCACAGGCTCATTTCGTTGCGTTCGACGGCCCGGCGCAGCTCATGCTCCAGGGCGATGCGCTCGCTGGCCTGGGCGGTGAGGTCGCGGGTGTAGGCTTCGACGCGGTTGCGGCCCTTGGCCTTGGAGCGGTACATGGCGGCGTCGGCGTTGCGG  >  NC_002947/467820‑468116
                                                                                                                                                    |                                                                                                                                                    
ccGAGCTGCAGGATGGTGCCGTTCTCTTCCGCCAAGTGGATGAAGTGTTCCGGCGGTACCTCGCCAAAGGTCGGGTGGCTCCAGCGGATCAGCGCTTCGGCACCCACCAGGCTCTGGGTCTTCAGGCTGAGCTTGGGCTGGAAGCACAg                                                                                                                                                      <  7:132823/149‑1 (MQ=255)
ccGAGCTGCAGGATGGTGCCGTTCTCTTCCGCCAAGTGGATGAAGTGTTCCGGCGGTACCTCGCCAAAGGTCGGGTGGCTCCAGCGGATCAGCGCTTCGGCACCCACCAGGCTCTGGGTCTTCAGGCTGAGCTTGGGCTGGAAGCACAg                                                                                                                                                      <  7:81488/149‑1 (MQ=255)
       gCAGGATGGTGCCGTTCTCTTCCGCCAAGTGGATGAAGTGTTCCGGCGGTACCTCGCCAAAGGTCGGGTGGCTCCAGCGGATCAGCGCTTCGGCACCCACCAGGCTCTGGGTCTTCAGGCTGAGCTTGGGCTGGAAGCACAGGCTCAtt                                                                                                                                               >  5:304927/1‑149 (MQ=255)
         aGGATGGTGCCGTTCTCTTCCGCCAAGTGGATGAAGTGTTCCGGCGGTACCTCGCCAAAGGTCGGGTGGCTCCAGCGGATCAGCGCTTCGGCACCCACCAGGCTCTGGGTCTTCAGGCTGAGCTTGGGCTGGAAGCACAGGCTCATTTc                                                                                                                                             >  3:133543/1‑149 (MQ=255)
           gATGGTGCCGTTCTCTTCCGCCAAGTGGATGAAGTGTTCCGGCGGTACCTCGCCAAAGGTCGGGTGGCTCCAGCGGATCAGCGCTTCGGCACCCACCAGGCTCTGGGTCTTCAGGCTGAGCTTGGGCTGGAAGCACAGGCTCATTTCGt                                                                                                                                           >  3:199651/1‑149 (MQ=255)
            aTGGTGCCGTTCTCTTCCGCCAAGTGGATGAAGTGTTCCGGCGGTACCTCGCCAAAGGTCGGTTGGCTCCAGCGGATCAGCGCTTCGGCACCCACCAGGCTCTGGGTCTTCAGGCTGAGCGTGGGCTGGAAGCACAGGCTCATTTCGtt                                                                                                                                          <  1:20721/149‑1 (MQ=255)
                  ccGTTCTCTTCCGCCAAGTGGATGAAGTGTTCCGGCGGTACCTCGCCAAAGGTCGGGTGGCTCCAGCGGATCAGCGCTTCGGCACCCACCAGGCTCTGGGTCTTCAGGCTGAGCTTGGGCTGGAAGCACAGGCTCATTTCGTTGCGTTc                                                                                                                                    <  1:175730/149‑1 (MQ=255)
                     ttCTCTTCCGCCAAGTGGATGAAGTGTTCCGGCGGTACCTCGCCAAAGGTCGGGTGGCTCCAGCGGATCAGCGCTTCGGCACCCACCAGGCTCTGGGTCTTCAGGCTGAGCCTGTGCTTCCAGCCCAAGCTCagcctgaa                                                                                                                                          >  5:239345/1‑133 (MQ=38)
                     ttCTCTTCCGCCAAGTGGATGAAGTGTTCCGGCGGTACCTCGCCAAAGGTCGGGTGGCTCCAGCGGATCAGCGCTTCGGCACCCACCAGGCTCTGGGTCTTCAGGCTGAGCCTGTGCTTCCAGCCCAAGCTCagcctgaa                                                                                                                                          <  6:239345/140‑8 (MQ=38)
                          ttCCGCCAAGTGGATGAAGTGTTCCGGCGGTACCTCGCCAAAGGTCGGGTGGCTCCAGCGGATCAGCGCTTCGGCACCCACCAGGCTCTGGGTCTTCAGGCTGAGCTTGGGCTGGAAGCACAGGCTCATTTCGTTGCGTTCGACGGccc                                                                                                                            >  8:91938/1‑149 (MQ=255)
                             cGCCAAGTGGATGAAGTGTTCCGGCGGTACCTCGCCAAAGGTCGGGTGGCTCCAGCGGATCAGCGCTTCGGCACCCACCAGGCTCTGGGTCTTCAGGCTGAGCTTGGGCTGGAAGCACAGGCTCATTTCGTTGCGTTCGACGGCCCGgc                                                                                                                         <  7:108785/149‑1 (MQ=255)
                              gCCAAGTGGATGAAGTGTTCCGGCGGTACCTCGCCAAAGGTCGGGTGGCTCCAGCGGATCAGCGCTTCGGCACCCACCAGGCTCTGGGTCTTCAGGCTGAGCCTGTGCTTCCAGCCCAAGCTCagcc                                                                                                                                              <  7:69484/127‑4 (MQ=255)
                              gCCAAGTGGATGAAGTGTTCCGGCGGTACCTCGCCAAAGGTCGGGTGGCTCCAGCGGATCAGCGCTTCGGCACCCACCAGGCTCTGGGTCTTCAGGCTGAGCCTGTGCTTCCAGCCCAAGCTCagcc                                                                                                                                              >  8:69484/1‑124 (MQ=255)
                                 aaGTGGATGAAGTGTTCCGGCGGTACCTCGCCAAAGGTCGGGTGGCTCCAGCGGATCAGCGCTTCGGCACCCACCAGGCTCTGGGTCTTCAGGCTGAGCTTGGGCTGGAAGCACAGGCTCATTTCGtt                                                                                                                                          <  8:127808/128‑1 (MQ=255)
                                 aaGTGGATGAAGTGTTCCGGCGGTACCTCGCCAAAGGTCGGGTGGCTCCAGCGGATCAGCGCTTCGGCACCCACCAGGCTCTGGGTCTTCAGGCTGAGCTTGGGCTGGAAGCACAGGCTCATTTCGtt                                                                                                                                          >  7:127808/1‑128 (MQ=255)
                                   gTGGATGAAGTGTTCCGGCGGTACCTCGCCAAAGGTCGGGTGGCTCCAGCGGATCAGCGCTTCGGCACCCACCAGGCTCTGGGTCTTCAGGCTGAGCTTGGGCTGGAAGCACAGGCTCATTTCGTTGCGTTCGACGGCCCGGCGCAGCt                                                                                                                   >  4:102031/1‑149 (MQ=255)
                                    tGGATGAAGTGTTCCGGCGGTACCTCGCCAAAGGTCGGGTGGCTCCAGCGGATCAGCGCTTCGGCACCCACCAGGCTCTGGGTCTTCAGGCTGAGCTTGGGCTGGAAGCACAGGCTCATTTCGTTGCGTTCGACGGCCCGGCGCAGCt                                                                                                                   >  1:126610/1‑148 (MQ=255)
                                      gATGAAGTGTTCCGGCGGTACCTCGCCAAAGGTCGGGTGGCTCCAGCGGATCAGCGCTTCGGCACCCACCAGGCTCTGGGTCTTCAGGCTGAGCTTGGGCTGGAAGCACAGGCTCATTTCGTTGCGTTCGACGGCCCGGCGCAGCTCAt                                                                                                                >  7:24300/1‑149 (MQ=255)
                                        tGAAGTGTTCCGGCGGTACCTCGCCAAAGGTCGGGTGGCTCCAGCGGATCAGCGCTTCGGCACCCACCAGGCTCTGGGTCTTCAGGCTGAGCTTGGGCTGGAAGCACAGGCTCATTTCGTTGCGTTCGACGGCCCGGCGCAGCTCATGc                                                                                                              <  2:262261/149‑1 (MQ=255)
                                        tGAAGTGTTCCGGCGGTACCTCGCCAAAGGTCGGGTGGCTCCAGCGGATCAGCGCTTCGGCACCCACCAGGCTCTGGGTCTTCAGGCTGAGCTTGGGCTGGAAGCACAGGCTCATTTCGTTGCGTTCGACGGCCCGGCGCAGCTCATGc                                                                                                              >  3:61055/1‑149 (MQ=255)
                                          aacggtTCCGGCGGTACCTCCCCAAAGGTCGGGGGGCTCCAGCGGATCAGCGCTTCGGCACCCACCAGGCTCTGGGTCTTCAGGCTGAGCTTGGGCTGGAAGCACAGGCTCATTTCGTTGCGTGCGACGGCCCGGCGCAGCTCATGc                                                                                                              <  7:273986/143‑1 (MQ=255)
                                          aaGTGTTCCGGCGGTACCTCGCCAAAGGTCGGGTGGCTCCAGCGGATCAGCGCTTCGGCACCCACCAGGCTCTGGGTCTTCAGGCTGAGCTTGGGCTGGAAGCACAGGCTCATTTCGTTGCGTTCGACGGCCCGGCGCAGCTCATGCTc                                                                                                            <  5:114787/149‑1 (MQ=255)
                                           aGTGTTCCGGCGGTACCTCGCCAAAGGTCGGGTGGCTCCAGCGGATCAGCGCTTCGGCACCCACCAGGCTCTGGGTCTTCAGGCTGAGCTTGGGCTGGAAGCACAGGCTCATTTCGTCGCGTTCGACGGACCGGCGCAGCTCAttatc                                                                                                            >  8:277651/1‑144 (MQ=255)
                                           aGTGTTCCGGCGGTACCTCGCCAAAGGTCGGGTGGCTCCAGCGGATCAGCGCTTCGGCACCCACCAGGCTCTGGGTCTTCAGGCTGAGCTTGGGCTGGAAGCACAGGCTCATTTCGTAGCGTTCGAAGGCCCGGCGCAGCTCATGCta                                                                                                            >  8:281869/1‑147 (MQ=255)
                                             tgtTCCGGCGGTACCTCGCCAAAGGTCGGGTGGCTCCAGCGGATCAGCGCTTCGGCACCCACCAGGCTCTGGGTCTTCAGGCTGAGCTTGGGCTGGAAGCACAGGCTCATTTCGTTGCGTTCGACGGCCCGGCGCAGCTCATGCTCCAg                                                                                                         <  6:304927/149‑1 (MQ=255)
                                             tgtTCCGGCGGTACCTCGCCAAAGGTCGGGTGGCTCCAGCGGATCAGCGCTTCGGCACCCACCAGGCTCTGGGTCTTCAGGCTGAGCTTGGGCTGGAAGCACAGGCTCATTTCGTTGCGTTCGACGGCCCGGCGCAGCTCATGCTCCAg                                                                                                         <  4:133543/149‑1 (MQ=255)
                                               ttCCGGCGGTACCTCGCCAAAGGTCGGGTGGCTCCAGCGGATCAGCGCTTCGGCACCCACCAGGCTCTGGGTCTTCAGGCTGAGCTTGGGCTGGAAGCACAGGCTCATTTCGTTGCGTTCGACGGCCCGGCGCAGCTCATGCTCCAggg                                                                                                       <  2:219853/149‑1 (MQ=255)
                                                tCCGGCGGTACCTCGCCAAAGGTCGGGTGGCTCCAGCGGATCAGCGCTTCGGCACCCACCAGGCTCTGGGTCTTCAGGCTGAGCTTGGGCTGGAAGCACAGGCTCATTTCGTTGCGTTCGACGGCCCGGCGCAGCTCATGCTCCAGGGc                                                                                                      >  4:289889/1‑149 (MQ=255)
                                                 ccgccgGTACCTCGCCAAAGGTCGGGTGGCTCCAGCGGATCAGCGCTTCGGCAACCACCATGCTCTGGGTCTTCAGGCTGAGCTTGGGCTGGAAGCACAGGCTCATTTCGTTGCGTTCGACGGCCCGGCGCAGCTCATGCTCCAGGGc                                                                                                      >  5:225245/1‑148 (MQ=255)
                                                     cggTACCTCGCCAAAGGTCGGGTGGCTCCAGCGGATCAGCGCTTCGGCACCCACCAGGCTCTGGGTCTTCAGGCTGAGCTTGGGCTGGAAGCACAGGCTCATTTCGTTGTGTTCGACGGCCCGGCGCAGCTCATGCTCCAGGGCGATgc                                                                                                 <  6:74778/149‑1 (MQ=255)
                                                       gTACCTCGCCAAAGGTCGGGTGGCTCCAGCGGATCAGCGCTTCGGCACCCACCAGGCTCTGGGTCTTCAGGCTGAGCTTGGGCTGGAAGCACAGGCTCATTTCGTTGCGTTCGACGGCCCGGCGCAGCTCATGCTCCAGGGCGATgcgc                                                                                               <  1:1489/149‑1 (MQ=255)
                                                          ccTCGCCAAAGGTCGGGTGGCTCCAGCGGATCAGCGCTTCGGCACCCACCAGGCTCTGGGTCTTCAGGCTGAGCTTGGGCTGGAAGCACAGGCTCATTTCGTTGCGTTCGACGGCCCGGCGCAGCTCATGCTCCAGGGCGATGcgctc                                                                                             <  7:290610/148‑1 (MQ=255)
                                                           cTCGCCAAAGGTCGGGTGGCTCCAGCGGATCAGCGCTTCGGCCCCCCCCAGGCTCGGGGGCGTCCGGCGGAGCTTGGGCTGGAAGCACAGGCGCAGTGCGGGGCGTTCGACGGCCCGGCGCCGCTCATCCTCCAGGGCGAGGcgctc                                                                                             >  8:285605/1‑147 (MQ=255)
                                                              gCCAAAGGTCGGGTGGCTCCAGCGGATCAGCGCTTCGGCACCCACCAGGCTCTGGGTCTTCAGGCTGAGCTTGGGCTGGAAGCACAGGCTCATTTCGTTGCGTTCGACGGCCCGGCGCAGCTCATGCTCCAGGGCGATGCGCTCGCTgg                                                                                        >  4:144342/1‑149 (MQ=255)
                                                                     gTCGGGTGGCTCCAGCGGATCAGCGCTTCGGCACCCACCAGGCTCTGGGTCTTCAGGCTGAGCTTGGGCTGGAAGCACAGGCTCATTTCGTTGCGTTCGACGGCCCGGCGCAGCTCATGCTCCAGGGCGATGCGCTCGCTGGCCTGGGc                                                                                 >  5:123683/1‑149 (MQ=255)
                                                                        ggggggCTCCAGCGGATCAGCGCTTCGGCACCCACCAGGCTCTGGGGCTTCAGGCTGAGCTTGGGCTGGAAGCACAGGCTCATTTCGTTGCGTTCGACGGCCCGGCGCAGCTCATGCTCCAGGGCGATGCGCTCGCTGGCCTGGGCGGt                                                                              <  7:219736/149‑1 (MQ=255)
                                                                         ggTGGCTCCAGCGGATCAGCGCTTCGGCACCCACCAGGCTCTGGGTCTTCAGGCTGAGCTTGGGCTGGAAGCACAGGCTCATTTCGTTGCGTTCGACGGCCCGGCGCAGCTCATGCTCCAGGGCGATGCGCTCGCTGGCCTGGGCGGTg                                                                             <  2:65704/149‑1 (MQ=255)
                                                                         ggTGGCTCCAGCGGATCAGCGCTTCGGCACCCACCAGGCTCTGGGTCTTCAGGCTGAGCTTGGGCTGGAAGCACAGGCTCATTTCGTCGCGTTCGACGGCCCGGCGCAGCTCATGCTCCAGGGCGATGCGCTCGCTGGCCTGGGCGGTg                                                                             <  7:277651/149‑1 (MQ=255)
                                                                         ggTGGCTCCAGCGGATCAGCGCTTCGGCACCCACCAGGCTCTGGGTCTTCAGGCTGAGCTTGGGCTGGAAGCACAGGCTCATTTCGTCGCGTTCGACGGCCCGGCGCAGCTCATGCTCCAGGGCGATGCGCTCGCTGGCCTGGGCGGTg                                                                             <  7:281869/149‑1 (MQ=255)
                                                                             gCTCCAGCGGATCAGCGCTTCGGCACCCACCAGGCTCTGGGTCTTCAGGCTGAGCTTGGGCTGGAAGCACAGGCTCATTTCGTTGCGTTCGACGGCCCGGCGCAGCTCATGCTCCAGGGCGATGCGCTCGCTGGCCTGGGCGGTGAGGt                                                                         >  5:65964/1‑149 (MQ=255)
                                                                                 cAGCGGATCAGCGCTTCGGCACCCACCAGGCTCTGGGTCTTCAGGCTGAGCTTGGGCTGGAAGCACAGGCTCATTTCGTTGCGTTCGACGGCCCGGCGCAGCTCATGCTCCAGGGCGATGCGCTCGCTGGCCTGGGCGGTGAGGTcgcg                                                                     >  8:58361/1‑149 (MQ=255)
                                                                                  aGCGGATCAGCGCTTCGGCACCCACCAGGCTCTGGGTCTTCAGGCTGAGCTTGGGCTGGAAGCACAGGCTCATTTCGTTGCGTTCGACGGCCCGGCGCAGCTCATGCTCCAGGGCGATGCGCTCGCTGGCCTGGGCGGTGAGGTCGCgg                                                                    <  3:289889/149‑1 (MQ=255)
                                                                                           gcgcTTCGGCACCCACCAGGCTCTGGGTCTTCAGGCTGAGCTTGGGCTGGAAGCACAGGCTCATTTCGTTGCGTTCGACGGCCCGGCGCAGCTCATGCTCCAGGGCGATGCGCTCGCTGGCCTGGGCGGTGAGGTCGCGGGTGTAGGCt                                                           >  7:212088/1‑149 (MQ=255)
                                                                                               ttCGGCACCCACCAGGCTCTGGGTCTTCAGGCTGAGCTTGGGCTGGAAGCACAGGCTCATTTCGTTGCGTTCGACGGCCCGGCGCAGCTCATGCTCCAGGGCGATGCGCTCGCTGGCCTGGGCGGTGAGGTCGCGGGTGTAGGCTTCGa                                                       >  1:197363/1‑149 (MQ=255)
                                                                                                  ggCACCCACCAGGCTCTGGGTCTTCAGGCTGAGCTTGGGCTGGAAGCACAGGCTCATTTCGTTGCGTTCGACGGCCCGGCGCAGCTCATGCTCCAGGGCGATGCGCTCGCTGGCCTggg                                                                                  >  2:199574/1‑119 (MQ=255)
                                                                                                  ggCACCCACCAGGCTCTGGGTCTTCAGGCTGAGCTTGGGCTGGAAGCACAGGCTCATTTCGTTGCGTTCGACGGCCCGGCGCAGCTCATGCTCCAGGGCGATGCGCTCGCTGGCCTggg                                                                                  <  1:199574/119‑1 (MQ=255)
                                                                                                   gCACCCACCAGGCTCTGGGTCTTCAGGCTGAGCTTGGGCTGGAAGCACAGGCTCATTTCGTTGCGTTCGACGGCCCGGCGCAGCTCATGCTCCAGGGCGATGCGCTCGCTGGCCTGGGCGGTGAGGTCGCGGGTGTAGGCTTCGAcgcg                                                   >  5:70715/1‑149 (MQ=255)
                                                                                                      cccaccAGGCTCTGGGTCTTCAGGATGAGCGTGGGCTGGAAGCACAGGCTCATTTCGTTGCGTGCGACGGCCCGGCGCAGCTCATGCTCCAGGGCGATGCGCTCGCTGGCCTGGGCGGTGAGGTCGCGGGTGTAGGCTTCGACGCGGtt                                                <  2:219887/149‑1 (MQ=255)
                                                                                                        caccaGGCTCTGGGTCTTCAGGCTGAGCTTGGGCTGGAAGCACAGGCTCATTTCGTTGCGTTCGACGGCCCGGCGCAGCTCATGCTCCAGGGCGATGCGCTCGCTGGCCTGGGCGGTGAGGTCGCGGGTGTAGGCTTCGACGCGGTTGc                                              >  4:62009/1‑149 (MQ=255)
                                                                                                         accaGGCTCTGGGTCTTCAGGCTGAGCTTGGGCTGGAAGCACAGGCTCATTTCGTTGCGTTCGACGGCCCGGCGCAGCTCATGCTCCAGGGCGATGCGCTCGCTGGCCTGGGCGGTGAGGTCGCGGGTGTAGGCTTCGAcgccgccat                                              >  1:42251/1‑142 (MQ=255)
                                                                                                          ccaGGCTCTGGGTCTTCAGGCTGAGCTTGGGCTGGAAGCACAGGCTCATTTCGTTGCGTTCGACGGCCCGGCGCAGCTCATGCTCCAGGGCGATGCGCTCGCTGGCCTGGGCGGTGAGGTCGCGGGTGTAGGCTTCGACGCGGTTGCgg                                            <  4:61055/149‑1 (MQ=255)
                                                                                                                tctGGGTCTTCAGGCTGAGCTTGGGCTGGAAGCACAGGCTCATTTCGTTGCGTTCGACGGCCCGGCGCAGCTCATGCTCCAGGGCGATGCGCTCGCTGGCCTGGGCGGTGAGGTCGCGGGTGTAGGCTTCGACGCGGTTGCGGCccttg                                      >  5:212488/1‑149 (MQ=255)
                                                                                                                tctGGGTCTTCAGGCTGAGCTTGGGCTGGAAGCACAGGCTCATTTCGTTGCGTTCGACGGCCCGGCGCAGCTCATGCTCCAGGGCGATGCGCTCGCTGGCCTGGGCGGTGAGGTCGCGGGTGTAGGCTTCGACGCGGTTGCGGCccttg                                      >  5:128593/1‑149 (MQ=255)
                                                                                                                 ctGGGTCTTCAGGCTGAGCTTGGGCTGGAAGCACAGGCTCATTTCGTTGCGTTCGACGGCCCGGCGCAGCTCATGCTCCAGGGCGATGCGCTCGCTGGCCTGGGCGGTGAGGTCGCGGGTGTAGGCTTCGACGCGGTTGCGGCccttgg                                     >  3:311292/1‑149 (MQ=255)
                                                                                                                  tGGGTCTTCAGGCTGAGCTTGGGCTGGAAGCACAGGCTCATTTCGTTGCGTTCGACGGCCCGGCGCAGCTCATGCTCCAGTGCGATGCGCTCGCTGGCCTGGGCGGTGAGGTCGAGGGTGTAGCCTTCGACGCGGTTGCGGCccttggc                                    >  7:229827/1‑149 (MQ=255)
                                                                                                                  tGGGTCTTCAGGCTGAGCTTGGGCTGGAAGCACAGGCTCATTTCGTTGCGTTCGACGGCCCGGCGCAGCTCATGCTCCAGGGCGATGCGCTCGCTGGCCTGGGCGGTGAGGTCGCGGGTGTAGGCTTCGACGCGGTTGCGGCccttg                                      <  8:55429/147‑1 (MQ=255)
                                                                                                                  tGGGGCTGCCGGCGGAGCTTGGGCTGGACTCACAGGCTCATTTCGTGGCGTTCGCCGGCCCGGCGCAGCTCATGCTCCAGGGCGAGGCGCTCGCTGGCCGGGGCGGGGAGGTCGCGGGTGTAGGCGTCGACGCGGTTGCGGCccttggc                                    <  7:285605/149‑1 (MQ=255)
                                                                                                                    ggTCTTCAGGCTGAGCTTGGGCTGGAAGCAGAGGCTCATTTCGTTGCGTTCGACGGCCCGGCGCAGCTCATGCTCCAGGGCGATGCGCTCGCTGGCCTGGGCGGTGAGGTCGCGGGTGTAGGCTTCGACGCGGTTGCGGCccttggcc                                   <  8:212088/148‑1 (MQ=255)
                                                                                                                    ggTCTTCAGGCTGAGCTTGGGCTGGAAGCACAGGCTCATTTCGTTGCGTTCGACGGCCCGGCGCAGCTCATGCTCCAGGGCGATGCGCTCGCTGGCCTGGGCGGTGATGTCGCGGGTGTAGGCTTCGACGCGGTTGCGGCccttggc                                    <  8:24300/147‑1 (MQ=255)
                                                                                                                        ttCAGGCTGAGCTTGGGCTGGAAGCACAGGCTCATTTCGTTGCGTTCGACGGCCCGGCGCAGCTCATGCTCCAGGGCGATGCGCTCGCTGGCCTGGGCGGTGAGGTCGCGGGTGTAGGCTTCGACGCGGTTGCGGCccttggccttg                                >  5:198144/1‑147 (MQ=255)
                                                                                                                        ttCAGGCTGAGCTTGGGCTGGAAGCACAGGCTCATTTCGTTGCGTTCGACGGCCCGGCGCAGCTCATGCTCCAGGGCGATGCGCTCGCTGGCCTGGGCGGTGAGGTCGCGGGTGTAGGCTTCGACGCGGTTGCGGCccttggccttg                                >  7:56744/1‑147 (MQ=255)
                                                                                                                        ttCAGGCTGAGCTTGGGCTGGAAGCACAGGCTCATTTCGTTGCGTTCGACGGCCCGGCGCAGCTCATGCTCCAGGGCGATGCGCTCGCTGGCCTGGGCGGTGAGGTCGCGGGTGTAGGCTTCGACGCGGTTGCGGCccttg                                      >  3:117023/1‑141 (MQ=255)
                                                                                                                        ttCAGGCTGAGCTTGGGCTGGAAGCACAGGCTCATTTCGTTGCGTTCGACGGCCCGGCGCAGCTCATGCTCCAGGGCGATGCGCTCGCTGGCCTGGGCGGTGAGGTCGCGGGTGTAGGCTTCGACGCGGTTGCGGCccttg                                      <  4:117023/141‑1 (MQ=255)
                                                                                                                          cAGGCTGAGCTTGGGCTGGAAGCACAGGCTCATTTCGTTGCGTTCGACGGCCCGGCGCAGCTCATGCTCCAGGGCGATGCGCTCGCTGGCCTGGGCGGTGAGGTCGCGGGTGTAGGCTTCGACGCGGTTGCGGCccttggccttgg                               <  7:58361/146‑1 (MQ=255)
                                                                                                                           aGGCTGAGCTTGGGCTGGAAGCACAGGCTCATTTCGTTGCGTTCGACGGCCCGGCGCAGCTCATGCTCCAGGGCGATGCGCTCGCTGGCCTGGGCGGTGAGGTCGCGGGTGTAGGCTTCGACGCGGTTGCGGCCCTTGGCCTTGGAGc                            <  3:144342/148‑1 (MQ=255)
                                                                                                                            ggCTGAGCTTGGGCTGGAAGCACAGGCTCATTTCGTTGCGTTCGACGGCCCGGCGCAGCTCATGCTCCAGGGCGATGCGCTCGCTGGCCTGGGCGGTGAGGTCGCGGGTGTAGGCTTCGACGCGGTTGCGGCccttggcct                                  <  7:116097/141‑1 (MQ=255)
                                                                                                                            ggCTGAGCTTGGGCTGGAAGCACAGGCTCATTTCGTTGCGTTCGACGGCCCGGCGCAGCTCATGCTCCAGGGCGATGCGCTCGCTGGCCTGGGCGGTGAGGTCGCGGGTGTAGGCTTCGACGCGGTTGCGGCccttggcct                                  >  8:116097/1‑141 (MQ=255)
                                                                                                                            ggCTGAGCTTGGGCTGGAAGCACAGGCTCATTTCGTTGCGTTCGACGGCCCGGCGCAGCTCATGCTCCAGGGCGATGCGCTCGCTGGCCTGGGCGGTGAGGTCGCGGGTGTAGGCTTCGACGCGGTTGCGGCCCTTGGCCTTGGAGCgg                          >  3:147088/1‑149 (MQ=255)
                                                                                                                            ggCTGAGCTTGGGCTGGAAGCACAGGCTCATTTCGTTGCGTTCGACGGCCCGGCGCAGCTCATGATCCAGGGCGATGCGCTAGCTGGCCAGGGCGGTGAGGTCGCGGGTGTAGGCTTCGACGCGGTTGCGGCCCTTGGCCTTGGAGCgg                          >  1:260172/1‑149 (MQ=255)
                                                                                                                             gCTGAGCTTGGGCTGGAAGCACAGGCTCATTTCGTTGCGTTCGACGGCCCGGCGCAGCTCATGCTCCAGGGCGATGCGCTCGCTGGCCTGGGCGGTGAGGTCGCGGGTGTAGGCTTCGACGCGGTTGCGGCCCTTGGCCTTGGAGCGGt                         <  6:128593/149‑1 (MQ=255)
                                                                                                                             gCTGAGCTTGGGCTGGAAGCACAGGCTCATTTCGTTGCGTTCGACGGCCCGGCGCAGCGCATGCTCCAGGGCGATGCGCTCGCTGGCCTGGGCGGTGAGGTCGCGGGTGTAGGCTTCGACGCGGTTGCGGCCCTTGGCCTTGGAGCGGt                         <  4:199651/149‑1 (MQ=255)
                                                                                                                                      gggCTGGAAGCACAGGCTCATTTCGTTGCGTTCGACGGCCCGGCGCAGCTCATGCTCCAGGGCGATTCGCTCGCTGTCATGGGCGGTGAGGAAGCGTGTGTAGCCTTCGACGCGGTTGCGGCCATTGGCCTTGGAGCGGTACATggcgg                >  5:327727/1‑149 (MQ=255)
                                                                                                                                       ggCTTGAAGCACAGGCTCATTTCGTTGCGTTCGACGGCCCGGCGCAGCTCATGCTCCAGGGCGATGCGCTCGCTGGCCTGGGCGGTGAGGTCGCGGGTGTAGGCTTCGACGCGGTTGCGGCCCTTGGCCTTGGAGCGGTACATggcggc               <  6:123683/149‑1 (MQ=255)
                                                                                                                                        gCTGGAAGCACAGGCTCATTTCGTTGCGTTCGACGGCCCGGCGCAGCTCATGCTCCAGGGCGATGCGCTCGCTGGCCTGGGCGGTGAGGTCGCGGGTGTAGGCTTCGACGCGGTTGCGGCCCTTGGCCTTGGAGCGGTACATGgcggcg              >  5:67761/1‑149 (MQ=255)
                                                                                                                                         cTGGAAGCACAGGCTCATTTCGTTGCGTTCGACGGCCCGGCGCAGCTCATGCTCCAGGGCGATGCGCTCGCTGGCCTGGGCGGTGAGGTCGCGGGTGTAGGCTTCGACGCGGTTGCGGCCCTTGGCCTTGGAGCGGTACATg                    <  6:103549/142‑1 (MQ=255)
                                                                                                                                         cTGGAAGCACAGGCTCATTTCGTTGCGTTCGACGGCCCGGCGCAGCTCATGCTCCAGGGCGATGCGCTCGCTGGCCTGGGCGGTGAGGTCGCGGGTGTAGGCTTCGACGCGGTTGCGGCCCTTGGCCTTGGAGCGGTACATg                    >  5:103549/1‑142 (MQ=255)
                                                                                                                                            ccaGCCCAAGCTCATTTCGTTGCGTTCGACGGCCCGGCGCAGCTCATGCTCCAGGGCGATGCGCTCGCTGGCCTGGGCGGTGAGGTCGCGTGTGTAGGCTTCGACGCGGTTGCGGCCCTTGGCCTTGGAGCGGTACATGGcggcgtcg           <  1:252208/146‑1 (MQ=255)
                                                                                                                                               gCACAGGCTCATTTCGTTGCGTTCGACGGCCCGGCGCAGCTCATGCTACAGGGCGATGCGCTCGCTGGCCTTGGCGGTCAGTTCGCGGGTGTAGGCTTCGAAGGGGTTGCGGCCCTTGGCCTTGGAGCGGTACATGGcggcgtcggcgt       >  3:219368/1‑149 (MQ=255)
                                                                                                                                                cacaGGCTCATTTCGTTGCGTTCGACGGCCCGGCGCAGCTCATGCTCCAGGGCGATGCGCTCGCTGGCCTGGGCGGTGAGGTCGCGGGTGTAGGCTTCGACGCGGTTGCGGCCCTTGGCGTTGGAGCGGTACATGGCGGCGTCGGCGtt      >  4:70792/1‑149 (MQ=255)
                                                                                                                                                 acaGGCTCATTTCGTTGCGTTCGACGGCCCGGCGCAGCTCATGCTCCAGGGCGATGCGCTCGCTGGCCTGGGCGGTGAGGTCGCGGGTGTAGGCTTCGACGCGGTTGCGGCCCTTGGCCTTGGAGCGGTACATGGCGGCGTCGGCGTTg     >  5:272473/1‑149 (MQ=255)
                                                                                                                                                 acaGGCTCATTTCGTTGCGTTCGACGGCCCGGCGCAGCTCATGCTCCAGGGCGATGCGCTCGCTGGCCTGGGCGGTGAGGTCGCGGGTGTAGGCTTCGACGCGGTTGCGGCCCTTGGCCTTGGAGCGGTACATGGCGGCGTCGGCGTTg     >  8:87809/1‑149 (MQ=255)
                                                                                                                                                  caGGCTCATTTCGTTGCGTTCGACGGCCCGGCGCAGCTCATGCTCCAGGGCGATGCGCTCGCTGGCCTGGGCGGTGAGGTCGCGGGTGTAGGCTTCGACGCGGTTGCGGCCCTTGGCCTTGGAGCGGTACATGGCGGCGTCGGCGTTGc    <  3:113696/149‑1 (MQ=255)
                                                                                                                                                    ggCTCATTTCGTTGCGTTCGACGGCCCGGCGCAGCTCATGCTCCAGGGCGATGCGCTCGCTGGCCTGGGCGGTGAGGTCGCGGGTGTAGGCTTCGACGCGGTTGCGGCCCTTGGCCTTGGAGCGGTACATGGCGGCGTCGGCGTTGCgg  <  6:65964/149‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                    
CCGAGCTGCAGGATGGTGCCGTTCTCTTCCGCCAAGTGGATGAAGTGTTCCGGCGGTACCTCGCCAAAGGTCGGGTGGCTCCAGCGGATCAGCGCTTCGGCACCCACCAGGCTCTGGGTCTTCAGGCTGAGCTTGGGCTGGAAGCACAGGCTCATTTCGTTGCGTTCGACGGCCCGGCGCAGCTCATGCTCCAGGGCGATGCGCTCGCTGGCCTGGGCGGTGAGGTCGCGGGTGTAGGCTTCGACGCGGTTGCGGCCCTTGGCCTTGGAGCGGTACATGGCGGCGTCGGCGTTGCGG  >  NC_002947/467820‑468116

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑