| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 6,067,303 | A→T | 6.4% | intergenic (+119/‑55) | phoR → / → PP_5322 | two‑component system sensor histidine kinase/metal ion transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 6,067,303 | 0 | A | T | 6.4% | 233.1 / 4.8 | 78 | intergenic (+119/‑55) | phoR/PP_5322 | two‑component system sensor histidine kinase/metal ion transporter |
| Reads supporting (aligned to +/- strand): ref base A (36/37); new base T (2/3); total (38/40) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.02e-01 | |||||||||||
AGCACAATTGGCCAACGAAAAGGCTTGAGATTGAGGCTGCGGCGCAGCCCTTCGCGGGCATGCCGGCTGCCACTGGGCCCGCAATGAGTCCGCTGCCCTTTGCTTTTACGGCCCCAGCCGCTACATTGGATCCCCTGTGCCAGCAAAAGCTGGCACTTTTTTTCTCTCTATCTCAAAGACGGACCCCGTAAAAACTCCATCATGGACCCTTCCTCTGGTATTAGCCTCACCTCGTTATTCGCCGACTTCGGCATGATCATCTTTGCCTTCCTGCTGGTGCTGCTCAACGGCTTC > NC_002947/6067157‑6067450 | aGCACAATTGGCCAACGAAAAGGCTTGAGATTGAGGCTGCGGCGCAGCCCTTCGCGGGCATGCCGGCTGCCACTGGGCCCGCAATGAGTCCGCTGCCCTTTGCTTTTACGGCCCCAGCCGCTACATTGGATCCCCTGTGCCAGCAAAAg < 7:223939/149‑1 (MQ=255) cacaATTGGCCAACGAAAAGGCTTGAGATTGAGGCTGCGGCGCAGCCCTTCGCGGGCATGCCGGCTGCCACTGGGCCCGCAATGAGTCCGCTGCCCTTTGCTTTTACGGCCCCAGCCGCTACATTGGATCCCCTGTGCCAGCAAAAGCt < 8:171629/149‑1 (MQ=255) caATTGGCCAACGAAAAGGCTTGAGATTGAGGCTGCGGCGCAGCCCTTCGCGGGCATGCCGGCTGCCACTGGGCCCGCAATGAGTCCGCTGCCCTTTGCTTTTACGGCCCCAGCCGCTACATTGGATCCCCTGTGCCAGCAAAAGCTgg < 4:63219/149‑1 (MQ=255) caATTGGCCAACGAAAAGGCTTGAGATTGAGGCTGCGGCGCAGCCCTTCGCGGGCATGCCGGCTGCCACTGGGCCCGCAATGAGTCCGCTGCCCTTTGCTTTTACGGCCCCAGCCGCTACATTGGATCCCCTGTGCCAGCAAAAGCTgg < 4:113278/149‑1 (MQ=255) aTTGGCCAACGAAAAGGCTTGAGATTGAGGCTGCGGCGCAGCCCTTCGCGGGCATGCCGGCTGCCACTGGGCCCGCAATGAGTCCGCTGCCCTTTGCTTTTACGGGCCCAGCCGCTACATTGGATCCCCTGTGCCAGCAAAAGCTGGCa < 1:226886/149‑1 (MQ=255) gCCAACGAAAAGGCTTGAGATTGAGGCTGCGGCGCAGCCCTTCGCGGGCATGCCGGCTGCCACTGGGCCCGCAATGAGTCCGCTGCCCTTTGCTTTTACGGCCCCAGCCGCTACATTGGATCCCCTGTGCCAGCTTTTGCTGGCAca > 2:205873/1‑146 (MQ=255) gCCAACGAAAAGGCTTGAGATTGAGGCTGCGGCGCAGCCCTTCGCGGGCATGCCGGCTGCCACTGGGCCCGCAATGAGTCCGCTGCCCTTTGCTTTTACGGCCCCAGCCGCTACATTGGATCCCCTGTGCCAGCTTTTGCTGGCAca < 1:205873/147‑2 (MQ=255) ccAACGAAAAGGCTTGAGATTGAGGCTGCGGCGCAGCCCTTCGCGGGCATGCCGGCTGCCACTGGGCCCGCAATGAGTCCGCTGCCCTTTGCTTTTACGGCCCCAGCCGCTACATTGGATCCCCTGTGCCAGCTTTTGCTGGCAcaggg < 8:296791/149‑5 (MQ=255) aCGAAAAGGCTTGAGATTGAGGCTGCGGCGCAGCCCTTCGCGGGCATGCCGGCTGCCACTGGGCCCGCAATGAGTCCGCTGCCCTTTGCTTTTACGGCCCCAGCCGCTACATTGGATCCCCTGTGCCAGCAAAAGCTGGCACttttttt > 1:179560/1‑149 (MQ=255) aaaGGCTTGAGATTGAGGCTGCGGCGCAGCCCTTCGCGGGCATGCCGGCTGCCACTGGGCCCGCAATGAGTCCGCTGCCCTTTGCTTTTACGGCCCCAGCCGCTACATTGGATCCCCTGTGCCAGCAAAAGCTGGCACTTTTTTtctct < 1:121885/149‑1 (MQ=255) aaaGGCTTGAGATTGAGGCTGCGGCGCAGCCCTTCGCGGGCATGCCGGCTGCCACTGGGCCCGCAATGAGTCCGCTGCCCTTTGCTTTTACGGCCCCAGCCGCTACATTGGATCCCCTGTGCCAGCAAAAGCTGGCACTTTTTTtctct > 4:92968/1‑149 (MQ=255) aaaGGCTTGAGATTGAGGCTGCGGCGCAGCCCTTCGCGGGCATGCCGGCTGCCACTGGGCCCGCAATGAGTCCGCTGCCCTTTGCTTTTACGGCCCCAGCCGCTACATTGGATCCCCTGTGCCAGCAAAAGCTGGCACTTTTTTtctc < 5:254885/148‑1 (MQ=255) aaaGGCTTGAGATTGAGGCTGCGGCGCAGCCCTTCGCGGGCATGCCGGCTGCCACTGGGCCCGCAATGAGTCCGCTGCCCTTTGCTTTTACGGCCCCAGCCGCTACATTGGATCCCCTGTGCCAGCAAAAGCTGGCACTTTTTTtctc > 6:254885/1‑148 (MQ=255) aaGGCTTGAGATTGAGGCTGCGGCGCAGCCCTTCGCGGGCATGCCGGCTGCCACTGGGCCCGCAATGAGTCCGCTGCCCTTTGCTTTTACGGCCCCAGCCGCTACATTGGATCCCCTGTGCCAGCAAAAGCTGGCACTTTTTTtctctc > 5:320034/1‑149 (MQ=255) aGGCTTGAGATTGAGGCTGCGGCGCAGCCCTTCGCGGGCATGCCGGCTGCCACTGGGCCCGCAATGAGTCCGCTGCCCTTTGCTTTTACGGCCCCAGCCGCCACATTGGATCCCCTGTGCCAGCAAAAGCTGGCACTTTTTTTctctct < 4:216963/149‑1 (MQ=255) gCTTGAGATTGAGGCTGCGGCGCAGCCCTTCGCGGGCATGCCGGCTGCCACTGGGCCCGCAATGAGTCCGCTGCCCTTTGCTTTTACGGCCCCAGCCGCTACATTGGATCCCCTGTGCCAGCAAAAGCTGGCACTTTTTTTCTCTCTAt < 1:113552/149‑1 (MQ=255) ttGAGATTGAGGCTGCGGCGCAGCCCTTCGCGGGCATGCCGGCTGCCACTGGGCCCGCAATGAGTCCGCTGCCCTTTGCTTTTACGGCCCCAGCCGCTACATTGGATCCCCTGTGCCAGCAAAAGCTGGCACTTTTTTTCTCTCTAtct > 2:56718/1‑149 (MQ=255) ttGAGATTGAGGCTGCGGCGCAGCCCTTCGCGGGCATGCCGGCTGCCACTGGGCCCGCAATGAGTCCGCTGCCCTTTGCTTTTACGGCCCCAGCCGCCACATTGGATCCCCTGTGCCAGCAAAAGCTGGCACTTTTTTTCtatctatc > 3:13093/1‑148 (MQ=255) aTTGAGGCTGCGGCGCAGCCCTTCGCGGGCATGCCGGCTGCCCCTGGGCCCGCAATGAGTCCGCTGCCCTGTGGTTTTACGGCCGCAGGCGCGAGAGTGGAGCCCCTGTGCCAGGAAAGGCGGGCACTTTGTTTGTCTGTTTCTCAAAg > 4:237009/1‑149 (MQ=255) aGGCTGCGGCGCAGCCCTTCGCGGGCATGCCGGCTGCCACTGGGCCCGCAATGAGTCCGCTGCCCTTTGCTTTTACGGCCCCAGCCGCTACATTGGATCCCCTGTGCCAGCAAAAGCTGGCACTTTTTTTCTCTCTATCTCAAAGACg < 7:16150/148‑1 (MQ=255) ggCTGCGGCGCAGCCCTTCGCGGGCATGCCGGCTGCCACTGGGCCCGCAATGAGTCCGCTGCCCTTTGCTTTTACGGCCCCAGCCGCTACATTGGATCCCCTGTGCCAGCAAAAGCTGGCACTTTTTTtctc < 8:105926/132‑1 (MQ=255) gCTGCGGCGCAGCCCTTCGCGGGCATGCCGGCTGCCACTGGGCCCGCAATGAGTCCGCTGCCCTTTGCTTTTACGGCCCCAGCCGCTACATTGGATCCCCTGTGCCAGCAAAAGCTGGCACTTTTTTTCTCTCTATCTCAAAGACGGAc > 5:88423/1‑149 (MQ=255) tGCGGCGCAGCCCTTCGCGGGCATGCCGGCTGCCACTGGGCCCGCAATGAGTCCGCTGCCCTTTGCTTTTACGGCCCCAGCCGCTACATTGGATCCCCTGTGCCAGCTTTTGCTGGCAc < 6:213492/119‑1 (MQ=255) tGCGGCGCAGCCCTTCGCGGGCATGCCGGCTGCCACTGGGCCCGCAATGAGTCCGCTGCCCTTTGCTTTTACGGCCCCAGCCGCTACATTGGATCCCCTGTGCCAGCTTTTGCTGGCAc > 5:213492/1‑119 (MQ=255) ggcgCAGCCCTTCGCGGGCATGCCGGCTGCCACTGGGCCCGCAATGAGTCCGCTGCCCTTTGCTTTTACGGCCCCAGCCGCTACATTGGATCCCCTGTGCCAGCAAAAGCTGGCACTTTTTTTCTCTCTATCTCAAAGACGGACCCCGt < 8:31819/149‑1 (MQ=255) gcAGCCCTTCGCGGGCATGCCGGCTGCCACTGGGCCCGCAATGAGTCCGCTGCCCTTTGCTTTTACGGCCCCAGCCGCTACATTGGATCCCCTGTGCCAGCAAAAGCTGGCACTTTTTTTCTCTCTATCTCAAAGACGGACCCCGTaa > 5:95135/1‑148 (MQ=255) gCCCTTCGCGGGCATGCCGGCTGCCACTGGGCCCGCAATGAGTCCGCTGCCCTTTGCTTTTACGGCCCCAGCCGCTACATTGGATCCCCTGTGCCAGCAAAAGCTGGCACTTTTTTTCTCTCTATGTCAAAGACGGACCCCGTAAGAAc > 3:222932/1‑149 (MQ=255) cccTTCGCGGGCATGCCGGCTGCCACTGGGCCCGCAATGAGTCCGCTGCCCTTTGCTTTTACGGCCCCAGCCGCTACATTGGATCCCCTGTGCCAGCAAAAGCTGGCACTTTTTTTCTCTCTATCTCAAAGACGGACCCCGTAAAAACt > 3:290849/1‑149 (MQ=255) cccTTCGCGGGCATGCCGGCTGCCACTGGGCCCGCAATGAGTCCGCTGCCCTTTGCTTTTACGGCCCCAGCCGCTACATTGGATCCCCTGTGCCAGCAAAAGCTGGCACTTTTTTTATCTCTAACTCAAAGACGGACCCCCTAAAAACt > 1:140118/1‑149 (MQ=255) ccTTCGCGGGCATGCCGGCTGCCACTGGGCCCGCAATGAGTCCGCTGCCCTTTGCTTTTACGGCCCCAGCCGCTACATTGGATCCCCTGTGCCAGCAAAAGCTGGCACTTTTTTTCTCTCTATCTCAAAGACGGACCCCGTAAAAACTc > 2:138392/1‑149 (MQ=255) cTTCGCGGGCATGCCGGCTGCCACTGGGCCCGCAATGAGTCCGCTGCCCTTTGCTTTTACGGCCCCAGCCGCTACATTGGATCCCCTGTGCCAGCAAAAGCTGGCACTTTTTTTCTCTCTATCTCAAAGACGGACCCCGTAAAAACTc > 5:219589/1‑148 (MQ=255) gCATGCCGGCTGCCACTGGGCCCGCAATGAGTCCGCTGCCCTTTGCTTTTACGGCCCCAGCCGCTACATTGGATCCCCTGTGCCAGCAAAAGCTGGCACTTTTTTTCTCTCTATCTCAAAGACGGACCCCGTAAAAACTCCATCATGGa > 7:37261/1‑149 (MQ=255) cATGCCGGCTGCCACTGGGCCCGCAATGAGTCCGCTGCCCTTTGCTTTTACGGCCCCAGCCGCTACATTGGATCCCCTGTGCCAGCAAAAGCTGGCACTTTTTTTCTCTCTATCTCAAAGACGGACCCCGTAAAAACTCCATCATGGAc < 6:320034/149‑1 (MQ=255) tGCCACTGGGCCCGCAATGAGTCCGCTGCCCTTTGCTTTTACGGCCCCAGCCGCTACATTGGATCCCCTGTGCCAGCAAAAGCTGGCACTTTTTTTCTCTCTATCTCAAAGACGGACCCCGTAAAAACTCCATCATGGACACTTCctct > 5:185117/1‑149 (MQ=255) ccACTGGGCCCGCAATGAGTCCGCTGCCCTTTGCTTTTACGGCCCCAGCCGCTACATTGGATCCCCTGTGCCAGCAAAAGCTGGCACTTTTTTTCTCTCTATCTCAAAGACGGACCCCGTAAAAACTCCATCATGGACCCTTCctct < 8:77440/147‑1 (MQ=255) ccACTGGGCCCGCAATGAGTCCGCTGCCCTTTGCTTTTACGGCCCCAGCCGCTACATTGGATCCCCTGTGCCAGCAAAAGCTGGCACTTTTTTTCTCTCTATCTCAAAGACGGACCCCGTAAAAACTCCATCATGGACCCTTCCTCTgg > 3:72515/1‑149 (MQ=255) ccACTGGGCCCGCAATGAGTCCGCTGCCCTTTGCTTTTACGGCCCCAGCCGCTACATTGGATCCCCTGTGCCAGCAAAAGCTGGCACTTTTTTTCTCTCTATCTCAAAGACGGACCCCGTAAAAACTCCATCATGGACCCTTCCTCTg < 1:305449/148‑1 (MQ=255) ccACTGGGCCCGCAATGAGTCCGCTGCCCTTTGCTTTTACGGCCCCAGCCGCTACATTGGATCCCCTGTGCCAGCAAAAGCTGGCACTTTTTTTCTCTCTATCTCAAAGACGGACCCCGTAAAAACTCCATCATGGACCCTTCCTCTg < 1:56718/148‑1 (MQ=255) ccACTGGGCCCGCAATGAGTCCGCTGCCCTTTGCTTTTACGGCCCCAGCCGCTACATTGGATCCCCTGTGCCAGCAAAAGCTGGCACTTTTTTTATCTCTATCTCAAAGACGGACCCCGTAAAAAAACCATCATGCACCCTTCAACTgg > 2:295988/1‑149 (MQ=255) cACTGGGCCCGCAATGAGTCCGCTGCCCTTTGCTTTTACGGCCCCAGCCGCTACATTGGATCCCCTGTGCCAGCAAAAGCTGGCACTTTTTTTCTCTCTATCTCAAAGACGGACCCCGTAAAAACTCCATCATGGACCCTTCCTCTGGt > 7:138893/1‑149 (MQ=255) cACTGGGCCCGCAATGAGTCCGCTGCCCTTTGCTTTTACGGCCCCAGCCGCTACATTGGATCCCCTGTGCCAGCAAAAGCTGGCACTTTTTTTCTCTCTATCTCAAAGACGGACCCCGTAAAAACTCCATCATGGACCCTTCCTCTGGt < 6:95135/149‑1 (MQ=255) aCTGGGCCCGCAATGAGTCCGCTGCCCTTTGCTTTTACGGCCCCAGCCGCTACATTGGATCCCCTGTGCCAGCAAAAGCTGGCACTTTTTTTCTCTCTATCTCAAAGACGGACCCCGTAAAAACTCCATCATGGACCCTTCCTCTGGTa > 7:197407/1‑149 (MQ=255) cTGGGCCCGCAATGAGTCCGCTGCCCTTTGCTTTTACGGCCCCAGCCGCTACATTGGATCCCCTGTGCCAGCAAAAGCTGGCACTTTTTTTCTCTCTATCTCAAAGACGGACCCCGTAAAAACTCCATCATGGACCCTTc < 3:159420/140‑1 (MQ=255) cTGGGCCCGCAATGAGTCCGCTGCCCTTTGCTTTTACGGCCCCAGCCGCTACATTGGATCCCCTGTGCCAGCAAAAGCTGGCACTTTTTTTCTCTCTATCTCAAAGACGGACCCCGTAAAAACTCCATCATGGACCCTTc > 4:159420/1‑140 (MQ=255) ggCCCGCAATGAGTCCGCTGCCCTTTGCTTTTACGGCCCCAGCCGCTACATTGGATCCCCTGTGCCAGCAAAAGCTGGCACTTTTTTTCTCTCTATCTCAAAGACGGACCCCGTAAAAACTCCATCATGGACCCTTCCTCTGGTAtt < 8:170419/147‑1 (MQ=255) ggCCCGCAATGAGTCCGCTGCCCTTTGCTTTTACGGCCCCAGCCGCTACATTGGATCCCCTGTGCCAGCAAAAGCTGGCACTTTTTGTCTCTCTATCTCAAAGACGGACCCCGTAAAAACTCCATCATGGACCCTTCCTCTGGTATTAg > 7:170970/1‑149 (MQ=255) gCCCGCAATGAGTCCGCTGCCCTTTGCTTTTACGGCCCCAGCCGCTACATTGGATCCCCTGTGCCAGCAAAAGCTGGCACTTTTTTTCTCTCTATCTCAAAGACGGACCCCGTAAAAACTCCATCATGGACCCTTCCTCTGGTATTAGc > 3:21223/1‑149 (MQ=255) gCAATGAGTCCGCTGCCCTTTGCTTTTACGGCCCCAGCCGCTACATTGGATCCCCTGTGCCAGCAAAAGCTGGCACTTTTTTTCTCTCTATCTCAAAGACGGACCCCCTAAAAACTCCATCATGGACCCTTCCTCTgg > 2:29957/1‑138 (MQ=255) gCAATGAGTCCGCTGCCCTTTGCTTTTACGGCCCCAGCCGCTACATTGGATCCCCTGTGCCAGCAAAAGCTGGCACTTTTTTTCTCTCTATCTCAAAGACGGACCCCCTAAAAACTCCATCATGGACCCTTCCTCTgg < 1:29957/138‑1 (MQ=255) gTCCGCTGCCCTTTGCTTTTACGGCCCCAGCCGCTACATTGGATCCCCTGTGCCAGCAAAAGCTGGCACTTTTTTTCTCTCTATCTCAAAGACGGACCCCGTAAAAACTCCATCATGGACCCTTCCTCTGGTATTAGCCTCACCTCGtt < 3:188545/149‑1 (MQ=255) tCCGCTGCCCTTTGCTTTTACGGCCCCAGCCGCTACATTGGATCCCCTGTGCCAGCAAAAGCTGGCACTTTTTTTCTCTCTATCTCAAAGACGGACCCCGTAAAAACTCCATCATGGACCCTTCCTCTGGTATTAGCCTCACCTCGTTa > 5:205923/1‑149 (MQ=255) tCCGCTGCCCTTTGCTTTTACGGCCCCAGCCGCTACATTGGATCCCCTGTGCCAGCAAAAGCTGGCACTTTTTTTCTCTCTATCTCAAAGACGGACCCCGTAAAAACTCCATCATGGACCCTTCCTCTGGTATTAGCCTCACCTCGTTa < 6:185117/149‑1 (MQ=255) tttGCTTTTACGGCCCCAGCCGCTACATTGGATCCCCTGTGCCAGCAAAAGCTGGCACTTTTTTTCTCTCTATCTCAAAGACGGACCCCGTAAAAACTCCATCATGGACCCTTCCTCTGGTATTa < 2:16607/125‑1 (MQ=255) tttGCTTTTACGGCCCCAGCCGCTACATTGGATCCCCTGTGCCAGCAAAAGCTGGCACTTTTTTTCTCTCTATCTCAAAGACGGACCCCGTAAAAACTCCATCATGGACCCTTCCTCTGGTATTa > 1:16607/1‑125 (MQ=255) gCTTTTACGGCCCCAGCCGCTACATTGGATCCCCTGTGCCAGCAAAAGCTGGCACTTTTTTTCTCTCTATCTCAAAGACGGACCCCGTAAAAACTCCATCATGGACCCTTCCTCTGGTATTAGCCTCACCTCGTTATTCGCCGACTTc < 1:138392/148‑1 (MQ=255) cTTTTACGGCCCCAGCCGCTACATTGGATCCCCTGTGCCAGCAAAAGCTGGCACTTTTTTTCTCTCTATCTCAAAGACGGACCCCGTAAAAACTCCATCATGGACCCTTCCTCTGGTATTAGCCTCACCTCGTTATTCGCCGACTTCg < 2:179560/148‑1 (MQ=255) cTTTTACGGCCCCAGCCGCTACATTGGATCCCCTGTGCCAGCAAAAGCTGGCACTTTTTTTCTCTCTATCTCAAAGACGGACCCCGTAAAAACTCCATCATGGACCCTTCCTCTGGTATTAGCCTCACCTCGTTATTCGCCGACTTCg < 8:138893/148‑1 (MQ=255) ttttACGGCCCCAGCCGCTACATTGGATCCCCTGTGCCAGCAAAAGCTGGCACTTTTTTTCTCTCTATCTCAAAGACGGACCCCGTAAAAACTCCATCATGGACCCTTCCTCTGGTATTAGCCTCACCTCGTTATTCGCCGACTTCgg > 4:255506/1‑148 (MQ=255) ttACGGCCCCAGCCGCTACATTGGATCCCCTGTGCCAGCAAAAGCTGGCACTTTTTTTCTCTCTATCTCAAAGACGGACCCCGTAAAAACTCCATCATGGACCCTTCCTCTGGTATTAGCCTCACCTCGTTATTCGCCGACTTCGGc < 4:72515/147‑1 (MQ=255) ttACGGCCCCAGCCGCTACATTGGATCCCCTGTGCCAGCAAAAGCTGGCACTTTTTTTCTCTCTATCTCAAAGACGGACCCCGTAAAAACTCCATCATGGACCCTTCCTCTGGTATTAGCCTCACCTCGTTATTCGCCGACTTCGGc < 4:21223/147‑1 (MQ=255) tACGGCCCCAGCCGCGACATTGGTTACCCTGTGCCAGAAAATGCTGGCTCTTTTTTTCTCTCTATGTCAAAGACGGACCACGTAAATACTACTTCATGGACACTTCCTCTGGTATTAGCCTCACATCGTTATTCGCCGACTTCGTCAt < 4:13093/148‑1 (MQ=255) cGGCCCCAGCCGCTACATTGGATCCCCTGTGCCAGCAAAAGCTGGCACTTTTTTTCTCTCTATCTCAAAGACGGACCCCGTAAAAACTCCATCATGGACCCTTCCTCTGGTATTAGCCTCACCTCGTTATTCGCCGACTTCGGCATGa < 6:219589/148‑1 (MQ=255) ggCCCCAGCCGCTACATTGGATCCCCTGTGCCAGCAAAAGCTGGCACTTTTTTTCTCTCTATCTCAAAGACGGACCCCGTAAAAACTCCATCATGGACCCTTCCTCTGGTATTAGCCTCACCTCGTTATTCGCCGACTTCGGCATGat > 5:200216/1‑148 (MQ=255) ccccAGCCGCTACATTGGATCCCCTGTGCCAGCAAAAGCTGGCACTTTATTTCTCTCTATCTCAAAGTCGGACGCCGTAAAAACTCCATCATGGACCCTTCCTCTGGTATTAGCCTCACCTCGTTATTCGCCGACTTCGGCATGatcat < 8:37261/149‑1 (MQ=255) ccAGCCGCTACATTGGATCCCCTGTGCCAGCAAAAGCTGGCACTTTTTTTCTCTCTATCTCAAAGACGGACCCCGTAAAAACTCCATCATGGACCCTTCCTCTGGTATTAGCCTCACCTCGTTATTCGCCGACTTCg < 3:178301/137‑1 (MQ=255) ccAGCCGCTACATTGGATCCCCTGTGCCAGCAAAAGCTGGCACTTTTTTTCTCTCTATCTCAAAGACGGACCCCGTAAAAACTCCATCATGGACCCTTCCTCTGGTATTAGCCTCACCTCGTTATTCGCCGACTTCg > 4:178301/1‑137 (MQ=255) aGCCGCTACATTGGATCCCCTGTGCCAGCAAAAGCTGGCACTTTTTTTCTCTCTATCTCAAAGACGGACCCCGTAAAAACTCCATCATGGACCCTTCCTCTGGTATTAGCCTCACCTCGTTATTCGCCGACTTCGGCATGATCATCttt < 3:92968/149‑1 (MQ=255) gATCCCCTGTGCCAGCAAAAGCTGGCACTTTTTTTCTCTCTATCTCAAAGACGGACCCCGTAAAAACTCCATCATGGACCCTTCCTCTGGTATTAGCCTCACCTCGTTATTCGCCGACTTCGGCATGATCATCTTTGCCTTCCTGCTgg > 8:123778/1‑149 (MQ=255) gATCCCCTGTGCCAGCAAAAGCTGGCACTTTTTTTCTCTCTATCTCAAAGACGGACCCCGTAAAAACTCCATCATGGACCCTTCCTCTGGTATTAGACTCACCTCGTTATTCGCCGACTTCGGCATGATCATCTTTGCCTTCCTGCTgg > 1:233777/1‑149 (MQ=255) cccTGTGCCAGCAAAAGCTGGCACTTTTTTTCTCTCTATCTCAAAGACGGACCCCGTAAAAACTCCATCATGGACCCTTCCTCTGGTATTAGCCTCACCTCGTTATTCGCCGACTTCGGCATGATCATCTTTGCCTTCCTGCTGGtgct > 6:107722/1‑149 (MQ=255) ccTGTGCCAGCAAAAGCTGGCACTTTTTTTCTCTCTATCTCAAAGACGGACCCCGTAAAAACTCCATCATGGACCCTTCCTCTGGTATTAGCCTCACCTCGTTATTCGCCGACTTCGGCATGATCATCTTTGCCTTCCTGCTGGtgctg > 1:249997/1‑149 (MQ=255) ccTGTGCCAGCAAAAGCTGGCACTTTTTTTCTCTCTATCTCAAAGACGGACCCCGTAAAAACTCCATCATGGACCCTTCCTCTGGTATTAGCCTCACCTCGTTATTCGCCGACTTCGGCATGATCATCTTTGCCTTCCTGCTGGtgctg > 6:138964/1‑149 (MQ=255) ccTGTGCCAGCAAAAGCTGGCACTTTTTTTCTCTCTATCTCAAAGACGGACCCCGTAAAAACTCCATCATGGACCCTTCCTCTGGTATTAGCCTCACCTCGTTATTCGCCGACTTCGGCATGATCATCTTTGCCTTCCTGCTGGtgctg > 4:118093/1‑149 (MQ=255) cAGCAAAAGCTGGCACTTTTTTTCTCTCTATCTCTAAGACGGACCCCCTAAAAACTCCATCATGGACCCTTCCTCTGGTATTAGCCTCACCTCGTTATTCGGCGACTTCGGCATGATCATCTTTGCCTTCCTGCTGGTGCTGCTCAACg < 2:140118/149‑1 (MQ=255) cAGCAAAAGCTGGCACTTTTTTTCTCTCTATCTCAAAGACGGACCCCTTAAAAACTCCATCATGGACCCTTCCTCTGGTATTAGCCTCACCTCGTTATTCGCCGACTTCGGCATGATCATCTTTGCCTTCCTGCTGGTGCTGCTCAACg < 4:290849/149‑1 (MQ=255) cAGCAAAAGCTGGCACTTTTTTTCTCTCTATCTCAAAGACGGACCCCGTAAAAACTCcatca < 8:160095/62‑1 (MQ=255) cAGCAAAAGCTGGCACTTTTTTTCTCTCTATCTCAAAGACGGACCCCGTAAAAACTCcatca > 7:160095/1‑62 (MQ=255) cAGCAAAAGCTGGCACTTTTTTTCTCTCTATCTCAAAGACGGACCCCGTAAAAACTCCATCATGGACCCTTCCTCTGGTATTAGCCTCACCTCGTTATTCGCCGACTTCGGCATGATCATCTTTGCCTTCCTGCTGGTGCTGCTCAACg < 3:255506/149‑1 (MQ=255) aaaaGCTGGCACTTTTTTTCTCTCTATCTCAAAGACGGACCCCGTAAAAACTCCATCATGGACCCTTCCTCTGGTATTAGCCTCACCTCGTTATTCGCCGACTTCGGCATGATCATCTTTGCCTTCCTGCTGGTGCTGCTCAACGGctt < 8:197407/149‑1 (MQ=255) aaaGCTGGCACTTTTTTTCTCTCTATCTCAAAGACGGACCCCGTAAAAACTCCATCATGGACCCTTCCTCTGGTATTAGCCTCACCTCGTTATTCGCCGACTTCGGCATGATCATCTTTGCCTTCCTGCTGGTGCTGCTCAACGGcttc > 4:201124/1‑149 (MQ=255) aaaGCTGGCACTTTTTTTCTCTCTATCTCAAAGACGGACCCCGTAAAAACTCCATCATGGACCCTTCCTCTGGTATTAGCCTCACCTCGTTATTCGCCGACTTCGGCATGATCATCTTTGCCTTCCTGCTGGTGCTGCTCAACGGcttc > 5:124347/1‑149 (MQ=255) | AGCACAATTGGCCAACGAAAAGGCTTGAGATTGAGGCTGCGGCGCAGCCCTTCGCGGGCATGCCGGCTGCCACTGGGCCCGCAATGAGTCCGCTGCCCTTTGCTTTTACGGCCCCAGCCGCTACATTGGATCCCCTGTGCCAGCAAAAGCTGGCACTTTTTTTCTCTCTATCTCAAAGACGGACCCCGTAAAAACTCCATCATGGACCCTTCCTCTGGTATTAGCCTCACCTCGTTATTCGCCGACTTCGGCATGATCATCTTTGCCTTCCTGCTGGTGCTGCTCAACGGCTTC > NC_002947/6067157‑6067450 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |