Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 6,087,678 A→G 8.7% intergenic (+129/‑101) oruR → / → aphA ornithine utilization transcriptional regulator/acetylpolyamine aminohydrolase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029476,087,6780AG 8.7% 154.5 / 4.1 57intergenic (+129/‑101)oruR/aphAornithine utilization transcriptional regulator/acetylpolyamine aminohydrolase
Reads supporting (aligned to +/- strand):  ref base A (23/29);  new base G (2/3);  total (25/32)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

CCAGCCATTTTCGTGGTTGACCTGTTCTGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGCGTCACAACCCCTGACGCCCTGGTGGCCATTGTAGGAGCGGGTTCACCCGCGAAAAGGCCGGATAGGTCACCACCCATCCGGCCAAAGACCTTGGCCATATCAATCCCCTTTTGGCCGTTTGCGTCGTTCTCCCCTGCTGATCAGCCCATGACAATGGACCCACGCCAGTCCCACCGGAGAACAACAATGCTGACGATCTATTCCGATGACCACCGCCTGCACCACGGCCGCTG  >  NC_002947/6087530‑6087825
                                                                                                                                                    |                                                                                                                                                    
ccAGCCATTTTCGTGGTTGACCTGTTCTGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGCGTCACAACCCCTGACGCCCTGGTGGCCATTGTAGGAGCGGGTTCACCCGCGAAAAGGCCGGATAGGTCACCACCCATCCGGCCaaa                                                                                                                                                      <  3:145830/149‑1 (MQ=255)
ccAGCCATTTTCGTGGTTGACCTGTTCTGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGCGTCACAACCCCTGACGCCCTGGTGGCCATTGTAGGAGCGGGTTCACCCGCGAAAAGGCCGGATAGGTCACCACCCATCCGGCCaaa                                                                                                                                                      <  5:130623/149‑1 (MQ=255)
ccAGCCATTTTCGTGGTTGACCTGTTCTGGCCTCTTCGCGCGTAAACCCGCTCCTACAGGGGCGTCACAACCCCTGACGCCCTGGTGGCCATTGTAGGAGCGGGTTCACCCGCGAAAAGGCCGGATAGGTCACCACCCATCCGGCCaaa                                                                                                                                                      <  7:107630/149‑1 (MQ=255)
    ccATTTTCGTGGTTGACCTGTTCTGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGCGTCACAACCCCTGACGCCCTGGTGGCCATTGTAGGAGCGGGTTCACCCGCGAAAAGGCCGGATAGGTCACCACCCATCCGGCCAAAGAcc                                                                                                                                                  >  6:322742/1‑149 (MQ=255)
            gTGGTTGACCTGTTCTGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGCGTCACAACCCCTGACGCCCTGGTGGCCATTGTAGGAGCGGGTTCACCCGCGAAAAGGCCGGATAGGTCACCACCCATCCGGCCAAGGTCTTTGGccgg                                                                                                                                          <  2:201957/149‑3 (MQ=255)
             tGGTTGACCTGTTCTGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGCGTCACAACCCCTGACGCCCTGGTGGCCATTGTAGGAGCGGGTTCACCCGCGAAAAGGCCGGATAGGTCACCACCCATCCGGCCAAAGACCTTGGCCata                                                                                                                                         <  4:177457/149‑1 (MQ=255)
              ggTTGACCTGTTCTGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGCGTCACAACCCCTGACGCCCTGGTGGCCATTGTAGGAGCGGGTTCACCCGCGAAAAGGCCGGATAGGTCACCACCCATCCGGCCAAAGACCTTGGCCatat                                                                                                                                        >  8:242256/1‑149 (MQ=255)
               gTTGACCTGTTCTGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGCGTCACAACCCCTGACGCCCTGGTGGCCATTGTAGGAGCGGGTTCACCCGCGAAAAGGCCGGATAGGTCACCACCCATCCGGCCAAGGTCTTTGGccggat                                                                                                                                        <  3:294709/148‑5 (MQ=255)
                  gACCTGTTCTGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGCGTCACAACCCCTGACGCCCTGGTGGCCATTGTAGGAGCGGGTTCACCCGCGAAAAGGCCGGATAGGTCACCACCCATCCGGCCAAGGTCTTTGGccggatggg                                                                                                                                     <  5:314861/148‑8 (MQ=38)
                    ccTGTTCTGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGCGTCACAACCCCTGACGCCCTGGTGGCCATTGTAGGAGCGGGTTCACCCGCGAAAAGGCCGGATAGGTCACCACCCATCCGGCCAAAGACCTTGGCCATATCAATc                                                                                                                                   <  8:284148/148‑1 (MQ=255)
                     cTGTTCTGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGCGTCACAACCCCTGACGCCCTGGTGGCCATTGTAGGAGCGGGTTGACCCGCGAAAAGGCCGGATAGGTCACCACCCATCCGGCCAAAGACCTTGGCCATATAAATgcc                                                                                                                                 >  6:252712/1‑149 (MQ=255)
                          cTGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGCGTCACAACCCCTGACGCCCTGGTGGCCATTGTAGGAGCGGGTTCACCCGCGAAAAGGCCGGATAGGTCACCACCCATCCGGCCAAAGACCTTGGCCATATCAATCCCCttt                                                                                                                             <  2:56481/148‑1 (MQ=255)
                             gCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGCGTCACAACCCCTGACGCCCTGGTGGCCATTGTAGGAGCGGGTTCACCCGCGAAAAGGCCGGATAGGTCACCACCCATCCGGCCAAAGACCTTGGCCATATCAATCCCCtttt                                                                                                                            <  7:38688/146‑1 (MQ=255)
                                        ggTAAACCCGCTCCTACAGGGGCGTCACAACCCCTGACGCCCTGGTGGCCATTGTAGGAGCGGGTTCACCCGCGAAAAGGCCGGATAGGTCACCACCCCTCCGGCCAAAGACCTTGGCCATATCAATCCCCTTTTGGCCGTTTGcgtcg                                                                                                              >  7:14113/1‑149 (MQ=255)
                                                        cAGGGGCGTCACAACCCCTGACGCCCTGGTGGCCATTGTAGGAGCGGGTTCACCCGCGAAAAGGCCGGATAGGTCACCACCCATCCGGCCAAAGACCTTGGCCATATCAATCCCCTTTTGGCCGTTTGCGTCGTTCTCCCCTGCTGAt                                                                                               <  3:234726/148‑1 (MQ=255)
                                                         aGGGGCGTCACAACCCCTGACGCCCTGGTGGCCATTGTAGGAGCGGGTTCACCCGCGAAAAGGCCGGATAGGTCACCACCCATCCGGCCAAAGACCTTGGCCATATCAATCCCCTTTTGGCCGTTTGCGTCGTTCTCCCCTGCTGATCa                                                                                            <  8:194715/149‑1 (MQ=255)
                                                           gggCGTCACAACCCCTGACGCCCTGGTGGCCATTGTAGGAGCGGGTTCACCCGCGAAAAGGCCGGATAGGTCACCACCCATCCGGCCAAAGACCTTGGCCATATCAATCCCCTTTTGGCCGTTTGCGTCGTTCTCCCCTGCTGATCAGc                                                                                          >  5:128303/1‑149 (MQ=255)
                                                            ggCGTCACAACCCCTGACGCCCTGGTGGCCATTGTAGGAGCGGGTTCACCCGCGAAAAGGCCGGATAGGTCACCACCCATCCGGCCAAAGACCTTGGCCATATCAATCCCCTTTTGGCCGTTTGCGTCGTTCTCCCCTGCTGATCAGc                                                                                          <  7:107714/148‑1 (MQ=255)
                                                                  acaACCCCTGACGCCCTGGTGGCCATTGTAGGAGCGGGTTCACCCGCGAAAAGGCCGGATAGGTCACCACCCATCCGGCCAAAGACCTTGGCCATATCAATCCCCTTTTGGCCGTTTGCGTCGTTCTCCCCTGCTGATCAGCCCa                                                                                       <  2:285325/145‑1 (MQ=255)
                                                                  acaACCCCTGACGCCCTGGTGGCCATTGTAGGAGCGGGTTCACCCGCGAAAAGGCCGGATAGGTCACCAACCATCCGGCCAAAGACCTTGGCCATATCAATCCCCTTTTGGCCGTTTGCGTCGTTCTCCCCTGCTGATCAGCCCa                                                                                       >  1:285325/1‑145 (MQ=255)
                                                                    aaCCCCTGACGCCCTGGTGGCCATTGTAGGAGCGGGTTCACCCGCGAAAAGGCCGGATAGGTCACCACCCATCCGGCCAAAGACCTTGGCCATATCAATCCCCTTTTGGCCGTTTGCGTCGTTCTCCCCTGCTGATCAGCCCATGACaa                                                                                 <  7:71854/149‑1 (MQ=255)
                                                                    aaCCCCTGACGCCCTGGTGGCCATTGTAGGAGCGGGTTCACCCGCGAAAAGGCCGGATAGGTCACCACCCATCCGGCCAAAGACCTTGGCCATATCAATCCCCTTTTGGCCGTTTGCGTCGTTCTCCCCTGCTGATCAGCCCATGACaa                                                                                 >  3:98252/1‑149 (MQ=255)
                                                                     aCCCCTGACGCCCTGGTGGCCATTGTAGGAGCGGGTTCACCCGCGAAAAGGCCGGATAGGTCACCACCCATCCGGCCAAAGACCTTGGCCATATCAATCCCCTTTTGGCCGTTTGCGTCGTTCTCCCCTGCTGATCAGCCCATGACAAt                                                                                <  6:128303/149‑1 (MQ=255)
                                                                       cccTGACGCCCTGGTGGCCATTGTAGGAGCGGGTTCACCCGCGAAAAGGCCGGATAGGTCACCACCCATCCGGCCAAAGACCTTGGCCATATCAATCCCCttt                                                                                                                             >  6:14566/1‑103 (MQ=255)
                                                                       cccTGACGCCCTGGTGGCCATTGTAGGAGCGGGTTCACCCGCGAAAAGGCCGGATAGGTCACCACCCATCCGGCCAAAGACCTTGGCCATATCAATCCCCttt                                                                                                                             <  5:14566/103‑1 (MQ=255)
                                                                        ccTGACGCCCTGGTGGCCATTGTAGGAGCGGGTTCACCCGCGAAAAGGCCGGATAGGTCACCACCCATCCGGCCAAAGACCTTGGCCATATCAATCCCCTTTTGGCCGTTTGCGTCGTTCTCCCCTGCTGATCAGCCCATGACAATGGa                                                                             <  8:155202/149‑1 (MQ=255)
                                                                          tGACGCCCTGGTGGCCATTGTAGGAGCGGGTTCACCCGCGAAAAGGCCGGATAGGTCACCACCCATCCGGCCAAAGACCTTGGCCATATCAATCCCCTTTTgg                                                                                                                          >  8:94495/1‑103 (MQ=255)
                                                                           gACGCCCTGGTGGCCATTGTAGGAGCGGGTTCACCCGCGAAAAGGCCGGATAGGTCACCACCCATCCGGCCAAAGACCTTGGCCATATCAATCCCCTTTTGGCCGTTTGCGTCGTTCTCCCCTGCTGATCAGCCCATGACAATGGAcc                                                                           >  1:176187/1‑148 (MQ=255)
                                                                            aCGCCCTTGTGGCCATTGTAGGAGCGGGTTCACCCGCGAAAAGGCCGGATAGGTCACCACCCATCCTGCCAAAGACCTTGGCCATATCAATCCCCTTTTGGCCGTTTGCGTCGTTCTCCCCTGCTGATCAGCCCATGACAATGGAcc                                                                           <  5:252712/147‑1 (MQ=255)
                                                                               cccTGGTGGCCATTGTAGGAGCGGGTTCACCCGCGAAAAGGCCGGATAGGTCACCACCCATCCGGCCAAAGACCTTGGCCATATCAATCCCCTTTTGGCCGTTTGCGTCGTTCTCCCCTGCTGATCAGCCCATGACAATGGACCCACGc                                                                      <  7:242256/149‑1 (MQ=255)
                                                                                ccTGGTGGCCATTGTAGGAGCGGGTTCACCCGCGAAAAGGCCGGATAGGTCACCACCCATCCGGCCAAAGACCTTGGCCATATCAATCCCCTTTTGGCCGTTTGCGTCGTTCTCCCCTGCTGATCAGCCCATGACAATGGACCCACGc                                                                      >  7:213690/1‑148 (MQ=255)
                                                                                    gtggCCATTGTAGGAGCGGGTTCACCCGCGAAAAGGCCGGATAGGTCACCACCCATCCGGCCAAAGACCTTGGCCATATCAATCCCCTTTTGGCCGTTTGCGTCGTTCTCCCCTGCTGATCAGCCCATGACAATGGACCCACGCCAGTc                                                                 <  2:67771/149‑1 (MQ=255)
                                                                                             gTAGGAGCGGGTTCACCCGCGAAAAGGCCGGATAGGTCACCACCCATCCGGCCAAAGACCTTGGCCATATCAATCCCCTTTTGGCCGTTTGCGTCGTTCTCCCCTGCTGATCAGCCCATGACAATGGACCCACGCCAGTCCCACCGga                                                         <  8:137795/148‑1 (MQ=255)
                                                                                                  aGCGGGTTCACCCGCGAAAAGGCCGGATAGGTCACCACCCATCCGGCCAAAGACCTTGGCCATATCAATCCCCTTTTGGCCGTTTGCGTCGTTCTCCCCTGCTGATCAGCCCATGACAATGGACCCACGCCAGTCCCACCGGAGaacaa                                                   <  8:213690/149‑1 (MQ=255)
                                                                                                      ggTTCACCCGCGAAAAGGCCGGATAGGTCACCACCCATCCGGCCAAAGACCTTGGCCATATCAATCCCCTTTTGGCCGTTTGCGTCGTTCTCCCCTGCTGATCAGCCCATGACAATGGACCCACGCCAGTCCCACCGGAGAACAACAAt                                               <  5:322742/149‑1 (MQ=255)
                                                                                                      ggTTCACCCGCGAAAAGGCCGGATAGGTCACCACCCATCCGGCCAAAGACCTTGGCCATATCAATCCCCTTTTGGCCGTTTGCGTCGTTCTCCCCTGCTGATCAGCCCATGACAATGGACCCACGCCAGTCCCACCGGAGAACAACAAt                                               >  2:4088/1‑149 (MQ=255)
                                                                                                      ggTTCACCCGCGAAAAGGCCGGATAGGTCACCACCCATCCGGCCAAAGACCTTGGACATATCAATCCCCTTTTGGCCGTTTGCGTCGTTCTCCCCTGCTGATCAGCCCATGACAATGGACCCACGCCAGTCCCACCGGAGAACAACAAt                                               <  8:149734/149‑1 (MQ=255)
                                                                                                       gTTCACCCGCGAAAAGGCCGGATAGGTCACCACCCATCCGGCCAAAGACCTTGGCCATATCAATCCCCTTTTGGCCGTTTGCGTCGTTCTCCCCTGCTGATCAGCCCATGACAATGGACCCACGCCAGTCCCACCGGAGAACAACAAt                                               >  2:284490/1‑148 (MQ=255)
                                                                                                            accGCGAAAAGGCCGGATAGGTCACCACCCATCCGGCCAAAGACCTTGGCCATATCAATCCCCTTTTGGCCGTTTGCGTCGTTCTCCCCTGCTGATCTTGCCCATGACAATGGACCCACGCCAGTCCCACCGGAGAACAACAATGCTGa                                          <  1:80292/148‑1 (MQ=255)
                                                                                                              cgcgAAAAGGCCGGATAGGTCACCACCCATCCGGCCAAAGACCTTGGCCATATCAATCCCCTTTTGGCCGTTTGCGTCGTTCTCCCCTGCTGATCAGCCCATGACAATGGACCCACGCCAGTCCCACCGGAGAACAACAATGCTGACGa                                       >  4:307359/1‑149 (MQ=255)
                                                                                                               gcgAAAAGGCCGGATAGGTCACCACCCATCCGGCCAAAGACCTTGGCCATATCAATCCCCTTTTGGCCGTTTGCGTCGTTCTCCCCTGCTGATCAGCCCATGACAATGGACCCACGCCAGTCCCACCGGAGAACAACAATGCTGACGa                                       >  6:230992/1‑148 (MQ=255)
                                                                                                               gcgAAAAGGCCGGATAGGTCACCACCCATCCGGCCAAAGACCTTGGCCATATCAATCCCCTTTTGGCCGTTTGCGTCGTTCTCCCCTGCTGATCAGCCCATGACAATGGACCCACGCCAGTCCCACCGGAGAACAACAATGCTGACGAt                                      <  2:276870/149‑1 (MQ=255)
                                                                                                                 gAAAAGGCCGGATAGGTCACCACCCATCCGGCCAAAGACCTTGGCCATATCAATCCCCTTTTGGCCGTTTGCGTCGTTCTCCCCTGCTGATCAGCCCATTACAATGGACCCAAGCCAGTCCAACCGGATAACAACAAAGCTGAcagaac                                    >  6:149328/1‑144 (MQ=255)
                                                                                                                 gAAAAGGCCGGATAGGTCACCACCCATCCGGCCAAAGACCTTGGCCATATCAATCCCCTTTTGGCCGTTTGCGTCGTTCTCCCCTGCTGATCAGCCCATGACAATGGACCCACGCCAGTCCCACCGGAGAACAACAATGCTGa                                          <  5:149328/143‑1 (MQ=255)
                                                                                                                      ggCCGGATAGGTCACCACCCATCCGGCCAAAGACCTTGGCCATATCAATCCCCTTTTGGCCGTTTGCGTCGTTCTCCCCTGCTGATCAGCCCATGACAATGGACCCACGCCAGTCCCACCGGAGAACAACAATGCTGACGATCTATTcc                               >  4:49622/1‑149 (MQ=255)
                                                                                                                        ccGGATAGGTCACCACCCATCCGGCCAAAGACCTTGGCCATATCAATCCCCTTTTGGCCGTTTGCGTCGTTCTCCCCTGCTGATCAGCCCATGACAATGGACCCACGCCAGTCCCACCGGAGAACAACAATGCTGACGATGTATTCCGa                             >  2:26061/1‑149 (MQ=255)
                                                                                                                        ccGGATAGGTCACCACCCATCCGGCCAAAGACCTTGGCCATATCAATCCCCTTTTGGCCGTTTGCGTCGTTCTCCCCTGCTGATCAGCCCATGACAATGGACCCACGCCAGTCCCACCGGAGAACAACAATGCTGACGATCTATTCCGa                             >  5:116414/1‑149 (MQ=255)
                                                                                                                         cGGATAGGTCACCACCCATCCGGCCAAAGACCTTGGCCATATCAATCCCCTTTTGGCCGTTTGCGTCGTTCTCCCCTGCTGATCAGCCCATGACAATGGACCCACGCCAGTCCCACCGGAGAACAACAATGCTGACGATCTATTCCGAt                            <  8:14113/149‑1 (MQ=255)
                                                                                                                         cGGATAGGTCACCACCCATCCGGCCAAAGACCTTGGCCATATCAATCCCCTTTTGGCCGTTTGCGTCGTTCTCCCCTGCTGATCAGCCCATGACAATGGACCCACGCCAGTCCCACCGGAGAACAACAATGCTGACGATCTATTCCGAt                            <  5:16225/149‑1 (MQ=255)
                                                                                                                          ggATAGGTCACCACCCATCCGGCCAAAGACATTGGCCAAATAAATCCCCATTTTCCAGTTTGCGTCGTTCTCCCATGCTGATCAGCCCATGACAATGGACCCACTCCAGTCCCACCGAAGAACAACAATGATCACGATCTATTACGAt                            >  8:171991/1‑148 (MQ=255)
                                                                                                                            aTAGGTCACCACCCATCCGGCCAAAGACCTTGGCTATATCAATCCCCTTTTGGCCGTTTGCGTCGTTCTCCCCTGCTGATCAGCCCATGACAATGGACCCACGCCAGTCCCACCGGAGAACAACAATGCTGACGATCTATTCCGATGac                         >  2:34026/1‑149 (MQ=255)
                                                                                                                            aTAGGTCACCACCCATCCGGCCAAAGACCTTGGCCATATCAATCCCCTTTTGGCCGTTTGCGTCGTTCTCCCCTGCTGATCAGCCCATGACAATGGACCCACGCCAGTCCCACCGGAGAACAACAATGCTGACGATCTATTCCGATGac                         <  2:176187/149‑1 (MQ=255)
                                                                                                                                   accaccCATCCGGCCAAAGACCTTGGCCATATCAATCCCCTTTTGGCCGTTTGCGTCGTTCTCCCCTGCTGATCAGCCCATGACAATGGACCCACGCCAGTCCCACCGGAGAACAACAATGCTGACGATCTATTCCGATGACCACCGc                   <  6:116414/148‑1 (MQ=255)
                                                                                                                                         cATCCGGCCAAAGACCTTGGCCATATCAATCCCCTTTTGGCCGTTTGCGTCGTTCTCCCCTGCTGATCAGCCCATGACAATGGACCCACGCCAGTc                                                                 <  7:188502/96‑1 (MQ=255)
                                                                                                                                         cATCCGGCCAAAGACCTTGGCCATATCAATCCCCTTTTGGCCGTTTGCGTCGTTCTCCCCTGCTGATCAGCCCATGACAATGGACCCACGCCAGTc                                                                 >  8:188502/1‑96 (MQ=255)
                                                                                                                                           tatggCCAAGGTCTTTGGACATATCAATCACCTTTTGGCCGTTTGCGTCGTTGTCCCATGCTGATCAGCCCATGACAATGGACACACGACAGTCCCACCGGAGAACAAAAATGATGACGATCTATTCCGATGACAACCGCCTGcaccac          >  8:20694/4‑149 (MQ=255)
                                                                                                                                           tCCGGCCAAAGACCTTGGCCATATCAATCCCCTTTTGGCCGTTTGCGTCGTTCTCCCCTGCTGATCAGCCCATGACAATGGACCCACGCCAGTCCCACCGGAGAACAACAATGCTGACGATCTATTCCGATGACCACCGCCTGcaccac          >  1:224207/1‑149 (MQ=255)
                                                                                                                                            atggCCAAGGTCTTTGGCCATATCAATCCCCTTTTGGCCGTTTGCGTCGTTCTCCCCTGCTGATCAGCCCATGACAATGGACCCACGCCAGTCCCACCGGAGAACAACAATGCTGACGATCTATTCCGATGACCACCGCCTGCACCACg         >  1:294861/3‑149 (MQ=255)
                                                                                                                                                ccAAAGACCTTGGCCATATCAATCCCCTTTTGGCCGTTTGCGTCGTTCTCCCCTGCTGATCAGCCCATGACAATGGACCCACGCCAGTCCCACCGGAGAACAACAATGCTGACGATCTATTCCGATGACCACCGCCTGCACCACGGCCg     <  2:224207/149‑1 (MQ=255)
                                                                                                                                                 cAAAGACCTTGGCCATATCAATCCCCTTTTGGCCGTTTGCGTCGTTCTCCCCTGCTGATCAGCCCATGACAATGGACCCACGCCAGTCCCACCGGAGAACAACAATGCTGACGATCTATTCCGATGACCACCGCCTGCACCACGGCCGc    <  1:284490/149‑1 (MQ=255)
                                                                                                                                                   aaGACCTTGGCCATATCAATCCCCTTTTGGCCGTTTGCGTCGTTCTCCCCTGCTGATCAGCCCATGACAATGGACCCACGCCAGTCCCACCGGAGAACAACAATGCTGACGATCTATTCCGATGACCACCGCCTGCACCACGGCCGCTg  >  3:38929/1‑149 (MQ=255)
                                                                                                                                                    |                                                                                                                                                    
CCAGCCATTTTCGTGGTTGACCTGTTCTGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGCGTCACAACCCCTGACGCCCTGGTGGCCATTGTAGGAGCGGGTTCACCCGCGAAAAGGCCGGATAGGTCACCACCCATCCGGCCAAAGACCTTGGCCATATCAATCCCCTTTTGGCCGTTTGCGTCGTTCTCCCCTGCTGATCAGCCCATGACAATGGACCCACGCCAGTCCCACCGGAGAACAACAATGCTGACGATCTATTCCGATGACCACCGCCTGCACCACGGCCGCTG  >  NC_002947/6087530‑6087825

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: