| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 543,730 | C→T | 6.5% | A657V (GCT→GTT) | rpoC → | DNA‑directed RNA polymerase subunit beta' |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 543,730 | 0 | C | T | 6.5% | 224.5 / 3.5 | 77 | A657V (GCT→GTT) | rpoC | DNA‑directed RNA polymerase subunit beta' |
| Reads supporting (aligned to +/- strand): ref base C (33/38); new base T (3/2); total (37/40) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.63e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CTACCGCGTGGTTGGTCTGAAAGAGACCGTTATCTTCGCCGACCAACTGATGTACACCGGTTTCGCATACTCGACCATTTCCGGCGTTTCCATCGGTGTTAACGACTTCGTTATCCCGGACGAGAAAGCCCGCATCATCGGTAACG‑CTACCGATGAAGTGAAGGAAATCGAGAGCCAGTACGCCTCCGGCCTGGTAACCCAGGGCGAGAAGTACAACAAGGTCATCGACTTGTGGTCGAAGGCGAACGACGAAGTGTCCAAGGCGATGATGGCCAACCTCTCGAAAGAGAAGG > NC_002947/543584‑543876 | cTACCGCGTGGTTGGTCTGAAAGAGACCGTTATCTTCGCCGACCAACTGATGTACACCGGTTTCGCATACTCGACCATTTCCGGCGTTTCCATCGGTGTTAACGACTTCGTTATCCCGGACGAGAAAGCCCGCATCATCGGTAACG‑Ct > 7:59563/1‑148 (MQ=255)cTACCGCGTGGTTGGTCTGAAAGAGACCGTTATCTTCGCCGACCAACTGATGTACACCGGTTTCGCATACTCGACCATTTCCGGCGTTTCCATCGGTGTTAACGACTTCGTTATCCCGGACGAGAAAGCCCGCATCATCGGTAACG‑Ct < 8:59563/148‑1 (MQ=255) ctgggtgTGGTTGGTCTGAAAGAGACCGTTATCTTAGCCGACCAACTGATGTACACCGGTTTCGCATACTCGACCATTTCCGGCGTTTCCATCGGTGTTAACGACTTCGTTATCCCGGACGAGAACGCCCGCATCATCGGTAACG‑ATAc > 2:205680/7‑149 (MQ=255) ccGCGTGGTTGGTCTGAAAGAGACCGTTATCTTCGCCGACCAACTGATGTACACCGGTTTCGCATACTCGACCATTTCCGGCGTTTCCATCGGTGTTAACGACTTCGTTATCCCGGACGAGAAAGCCCGCATCATCGGTAACG‑CTACCg < 2:321905/149‑1 (MQ=255) cgcgTGGTTGGTCTGAAAGAGACCGTTATCTTCGCCGACCAACTGATGTACACCGGTTTCGCATACTCGACCATTTCCGGCGTTTCCATCGGTGTTAACGACTTCGTTATCCCGGACGAGAAAGCCCGCATCATCGGTAACG‑CTACCGa > 7:285332/1‑149 (MQ=255) gcgTGGTTGGTCTGAAAGAGACCGTTATCTTCGCCTATCAACTGATGTACACCGGTTTCGCATACTCGACCATTTCCTGCGTTTCCATCGGTGTTAACGAGTTCGTTATCCCGGACGAGAAAGCCCGCATCATCGTTAACG‑CTACCGAt < 3:95604/149‑1 (MQ=255) gcgTGGTTGGTCTGAAAGAGACCGTTATCTTCGCCGACCAACTGATGTACACCGGTTTCGCATACTCGACCATTTCCGGCGTTTCCATCGGTGTTAACGACTTCGTTATCCCGGACGAGAAAGCCCGCATCATCGGTAACG‑CTACCGAt > 8:190284/1‑149 (MQ=255) cgTGGTTGGTCTGAAAGAGACCGTTATCTTCGCCGACCAACTGATGTACACCGGTTTCGCATACTCGACCATTTCCGGCGTTTCCATCGGTGTTAACGACTTCGTTATCCCGGACGAGAAAGCCCGCATCATCGGTAACG‑CTACCGAtg < 5:3334/149‑1 (MQ=255) tggttggtCTGAAAGAGACCGTTATCTTCGCCGACCAACTGATGTACACCGGTTTCGCATACTCGACCATTTCCGGCGTTTCCATCGGTGTTAACGACTTCGTTATCCCGGACGAGAAAGCCCGCATCATCGGTAGCG‑TTACCGAtgat < 3:123534/149‑2 (MQ=255) gttggtCTGAAAGAGACCGTTATCTTCGCCGACCAACTGATGTACACCGGTTTCGCATACTCGACCATTTCCGGCGTTTCCATCGGTGTTAACGACTTCGTTATCCCGGACGAGAAAGCCCGCATCATCGGTAACG‑CTACCGAtgaagt < 7:276676/149‑1 (MQ=255) ttggtCTGAAAGAGACCGTTATCTTCGCCGACCAACTGATGTACACCGGTTTCGCATACTCGACCATTTCCGGCGTTTCCATCGGTGTTAACGACTTCGTTATCCCGGACGAGAAAGCCCGCATCATCGGTAGCG‑TTACCGAtgatgcg < 5:66045/149‑5 (MQ=255) gtCTGAAAGAGACCGTTATCTTCGCCGACCAACTGATGTACACCGGTTTCGCATACTCGACCATTTCCGGCGTTTCCATCGGTGTTAACGACTTCGTTATCCCGGACGAGAAAGCCCGCATCATCGGTAACG‑CTACCGAtgaagtgaa < 8:104155/148‑1 (MQ=255) cTGAAAGAGACCGTTATCTTCGCCGACCAACTGATCTACACCGCTTTCGCATACTCGACCATTTCCGGCGTTTCCATCGGTGTTAACGACTTCGTTATCCCGGACGAGAAAGCCACCATCATCCGTAACG‑CTACCGATGAAGAGAAgg > 6:90016/1‑148 (MQ=255) gAAAGAGACCGTTATCTTCGCCGACCAACTGATGTACACCGGTTTCGCATACTCGACCATTTCCGGCGTTTCCATCGGTGTTAACGACTTCGTTATCCCGGACGAGAAAGCCCGCATCATCGGTAACG‑CTACCGATGAAGTGAAGGaa > 8:201239/1‑148 (MQ=255) aaaGAGACCGTTATCTTCGCCGACCAACTGATGTACACCGGTTTCGCATACTCGACCATTTCCGGCGTTTCCATCGGTGTTAACGACTTCGTTATCCCGGACGAGAAAGCCCGCATCATCGGTAACG‑CTACCGAtgaa < 8:257560/138‑1 (MQ=255) aaaGAGACCGTTATCTTCGCCGACCAACTGATGTACACCGGTTTCGCATACTCGACCATTTCCGGCGTTTCCATCGGTGTTAACGACTTCGTTATCCCGGACGAGAAAGCCCGCATCATCGGTAACG‑CTACCGAtgaa > 7:257560/1‑138 (MQ=255) aaaGAGACCGTTATCTTCGCCGACCAACTGATGTACACCGGTTTCGCATACTCGACCATTTCCGGCGTTTCCATCGGTGTTAACGACTTCGTTATCCCGGACGAGAAAGCCCGCATCATCGGTAACG‑CTACCGATGAAGTGAAGGAAAt > 2:17132/1‑149 (MQ=255) aaaGAGACCGTTATCTTCGCCGACCAACTGATGTACACCGGTTTCGCATACTCGACCATTTCCGGCGTTTCCATCGGTGTTAACGACTTCGTTATCCCGGACGAGAAAGCCCGCATCATCGGTAACG‑CTACCGATGAAGTGAAGGAAAt > 1:103259/1‑149 (MQ=255) agagACCGTTATCTTCGCCGACCAACTGATGTACACCGGTTTCGCATACTCGACCATTTCCGGCGTTTCCATCGGTGTTAACGACTTCGTTATCCCGGACGAGAAAGCCCGCATCATCGGTAACG‑CTACCGATGAAGTGAAGGAAATc > 1:130003/1‑148 (MQ=255) gaCCGTTATCTTCGCCGACCAACTGATGTACACCGTGGTCGCATAATGGACCATTTCCGGCGGTTCCCTCGGTGTTACCGACTTCGTTATCCCGGACGAGAAATCCCGCATCATCGGTAACG‑CTACCGATGAAGTGAAGGAAATCgaga < 4:27003/149‑1 (MQ=255) aCCGTTATCTTCGCCGACCAACTGATGTACACCGGTTTCGCATACTCGACCATTTCCGGCGTTTCCATCGGTGTTAACGACTTCGTTATCCCGGACGAGAAAGCCCGCATCATCGGTAACGCCTACCGATGAAGTGAAGGAAATCgaga < 1:14306/149‑1 (MQ=255) ccGTTATCTTCGCCGACCAACTGATGTACACCGGTTTCGCATACTCGACCATTTCCGGCGTTTCCATCGGTGTTAACGACTTCGTTATCCCGGACGAGAAAGCCCGCATCATCGGTAACG‑CTACCGATGAAGTGAAGGAAATCGAGAGc < 8:92740/149‑1 (MQ=255) cTTCGCCGACCAACTGATGTACACCGGTTTCGCATACTCGACCATTTCCGGCGTTTCCATCGGTGTTAACGACTTCGTTATCCCGGACGAGAAAGCCCGCATCATCGGTAACG‑CTACCGATGAAGTGAAGGAAATCGAGAGCCAGTACg > 6:217280/1‑149 (MQ=255) tCGCCGACCAACTGATGTACACCGGTTTCGCATACTCGACCATTTCCGGCGTTTCCATCGGTGTTAACGACTTCGTTATCCCGGACGAGAAAGCCCGCATCATCGGTAACG‑CTACCGATGAAGTGAAGGAAATCgaga < 7:293546/138‑1 (MQ=255) tCGCCGACCAACTGATGTACACCGGTTTCGCATACTCGACCATTTCCGGCGTTTCCATCGGTGTTAACGACTTCGTTATCCCGGACGAGAAAGCCCGCATCATCGGTAACG‑CTACCGATGAAGTGAAGGAAATCgaga > 8:293546/1‑138 (MQ=255) cGCCGACCAACTGATGTACACCGGTTTCGCATACTCGACCATTTCCGGCGTTTCCATCGGTGTTAACGACTTCGTTATCCCGGACGAGAAAGCCCGCATCATCGGTAACG‑CTACCGATGAAGTGAAGGAAATCGAGAGCCAGTACGc < 2:103259/147‑1 (MQ=255) gACCAACTGATGTACACCGGTTTCGCATACTCGACCATTTCCGGCGTTTCCATCGGTGTTAACGACTTCGTTATCCCGGACGAGAAAGCCCGCATCATCGGTAACG‑CTACCGATGAAGTGAAGGAAATCGAGAGCCAGTACGCCTCCgg > 3:241491/1‑149 (MQ=255) gACCAACTGATGTACACCGGTTTCGCATACTCGACCATTTCCGGCGTTTCCATCGGTGTTAACGACTTCGTTATCCCGGACGAGAAAGCCCGCATCATCGGTAACG‑CTACCGATGAAGTGAAGGAAATCGAGAGCCAGTACGCCTCCgg > 6:68834/1‑149 (MQ=255) cAACTGATGTACACCGGTTTCGCATACTCGACCATTTCCGGCGTTTCCATCGGTGTTAACGACTTCGTTATCCCGGACGAGAAAGCCCGCATCATCGGTAACG‑CTACCGATGAAGTGAAGGAAATCga < 4:60245/128‑1 (MQ=255) cAACTGATGTACACCGGTTTCGCATACTCGACCATTTCCGGCGTTTCCATCGGTGTTAACGACTTCGTTATCCCGGACGAGAAAGCCCGCATCATCGGTAACG‑CTACCGATGAAGTGAAGGAAATCga > 3:60245/1‑128 (MQ=255) aaCTGATGTACACCGGTTTCGCATACTCGACCATTTCCGGCGTTTCCATCGGTGTTAACGACTTCGTTATCCCGGACGAGAAAGCCCGCATCATCGGTAACG‑CTACCGATGAAGTGAAGGAAATCGAGAGCCAGTACGCCTCCGGCCTg < 8:285332/149‑1 (MQ=255) aaCTGATGTACACCGGTTTCGCATACTCGACCATTTCCGGCGTTTCCATCGGTGTTAACGACTTCGTTATCCCCGACGAGAAAGCCCGCATCATCGGTAACG‑CTACCGATGAAGTGAAGGAAATCGAGAGCCAGTACGCCTCCGGCCTg < 3:306878/149‑1 (MQ=255) aTGTACACCGGTTTCGCATACTCGACCATTTCCGGCGTTTCCATCGGTGTTAACGACTTCGTTATCCCGGACGAGAAAGCCCGCATCATCGGTAACG‑CTACCGATGAAGTGAAGGAAATCGAGAGCCAGTACGCCTCCGGCCTGGTAAc > 8:74109/1‑149 (MQ=255) gTACACCGGTTTCGCATACTCGACCATTTCCGGCGTTTCCATCGGTGTTAACGACTTCGTTATCCCGGACGAGAAAGCCCGCATCATCGGTAACG‑CTACCGATGAAGGGAAGGAAATCGAGAGCCAGTACGCCTCCGGCCTGGTaccg > 4:14611/1‑145 (MQ=255) tACACCGGTTTCGCATACTCGACCATTTCCGGCGTTTCCATCGGTGTTAACGACTTCGTTATCCCGGACGAGAAAGCCCGCATCATCGGTAACG‑CTACCGATGAAGTGAAGGAAATCGAGAGCCAGTACGCCTCCGGCCTGGTAAccc < 5:90016/148‑1 (MQ=255) acacCGGTTTCGCATACTCGACCATTTCCGGCGTTTCCATCGGTGTTAACGACTTCGTTATCCCGGACGAGAAAGCCCGCATCATCGGTAACG‑CTACCGATGAAGTGAAGGAAATCGAGAGCCAGTACGCCTCCGGCCTGGTAACCCAg > 7:197548/1‑149 (MQ=255) ggTTTCGCATACTCGACCATTTCCGGCGTTTCCATCGGTGTTAACGACTTCGTTATCCCGGACGAGAAAGCCCGCATCATCGGTAACG‑CTACCGATGAAGTGAAGGAAATCGAGAGCCAGTACGCCTCCGGCCTGGTAACCCAGGGCga < 4:241491/149‑1 (MQ=255) gTTTCGCATACTCGACCATTTCCGGCGTTTCCATCGGTGTTAACGACTTCGTTATCCCGGACGAGAAAGCCCGCATCATCGGTAACG‑CTACCGATGAAGTGAAGGAAATCGAGAGCCAGTACGCCTCCGGCCTGGTAACCCAGGGCgag < 5:144812/149‑1 (MQ=255) tCGCATACTCGACCATTTCCGGCGTTTCCATCGGTGTTAACGACTTCGTTATCCCGGACGAGAAAGCCCGCATCATCGGTAACG‑CTACCGATGAAGTGAAGGAAATCGAGAGCCAGTACGCCTCCGGCCTGGTAACCCAGGGCGAGaa < 3:14611/148‑1 (MQ=255) cGCATACTCGACCATTTCCGGCGTTTCCATCGGTGTTAACGACTTCGTTATCCCGGACGAGAAAGCCCGCATCATCGGTAACG‑CTACCGATGAAGTGAAGGAAATCGAGAGCCAGTACGCCTCCGGCCTGGTAACCCAGGGCGAGAAg < 7:190284/148‑1 (MQ=255) gCATACTCGACCATTTCCGGCGTTTCCATCGGTGTTAACGACTTCGTTATCCCGGACGAGAAAGCCCGCATCATCGGTAACG‑CTACCGATGAAGTGAAGGAAATCGAGAGCCa > 4:81501/1‑113 (MQ=255) gCATACTCGACCATTTCCGGCGTTTCCATCGGTGTTAACGACTTCGTTATCCCGGACGAGAAAGCCCGCATCATCGGTAACG‑CTACCGATGAAGTGAAGGAAATCGAGAGCCAGTACGCCTCCGGCCTGGTAACCCAGGGCGAGAAGt < 3:241309/148‑1 (MQ=255) aCTCGACCATTTCCGGCGTTTCCATCGGTGTTAACGACTTCGTTATCCCGGACGAGAAAGCCCGCATCATCGGTAACG‑CTACCGATGAAGTGAAGGAAATCGAGAGCCAGTACGCCTCCGGCCTGGTAACCCAGGGCGAGAAGTacaa > 2:8445/1‑148 (MQ=255) gACCATTTCCGGCGTTTCCATCGGTGTTAACGACTTCGTTATCCCGGACGAGAAAGCCCGCATCATCGGTAACG‑CTACCGATGAAGTGAAGGAAATCGAGAGCCAGTACGCCTCCGGCCTGGTAACCCAGGGCGAGAAGTACAACAAgg > 7:274633/1‑149 (MQ=255) gACCATTTCCGGCGTTTCCATCGGTGTTAACGACTTCGTTATCCCGGACGAGAAAGCCCGCATCATCGGTAACG‑CTACCGATGAAGTGAAGGAAATCGAGAGCCAGTACGCCTCCGGCCTGGTAACCCAGGGCGAGAAGTACAACAAg < 1:36244/148‑1 (MQ=255) cATTTCCGGCGTTTCCATCGGTGTTAACGACTTCGTTATCCCGGACGAGAAAGCCCGCATCATCGGTAACG‑CTACCGATGAAGTGAAGGAAATAGAGAGCCAGTACGCCTCCGGCCTGGTAACACAGGGCGAGAAGTACAACAAGGTCa > 7:285542/1‑149 (MQ=255) tttCCGGCGTTTCCATCGGTGTTAACGACTTCGTTATCCCGGACGAGAAAGCCCGCATCATCGGTAACG‑CTACCGATGAAGTGAAGGAAATCGAGAGCCAGTACGCCTCCGGCCTGGTAACCCAGGGCGAGAAGTACAACAAGGTCATc < 4:215277/149‑1 (MQ=255) ggCGTTTCCATCGGTGTTAACGACTTCGTTATCCCGGACGAGAAAGCCCGCATCATCGGTAACG‑CTACCGATGAAGTGAAGGAAATCGAGAGCCAGTACGCCTCCGGCCTGGTAACCCAGGGCGAGAAGTACAACAAGGTCATCGACtt < 5:217280/149‑1 (MQ=255) cGTTTCCATCGGTGTTACCGACTTCGTTATCCCGGACGAGAAAGCCCGCATCATCGGTAACG‑CTACCGATGAAGTGAAGGAAATCGAGAGCCAGTACGCCTCCGGCCTGGTAACCCAGGGCGAGAAGTACAACAAGGTCATCGACTtgt < 8:134781/149‑1 (MQ=255) cATCGGTGTTAACGACTTCGTTATCCCGGACGAGAAAGCCCGCATCATCGGTAACG‑CTACCGATGAAGTGAAGGAAATCGAGAGCCAGTACGCCTCCGGCCTGGTAACCCAGGGCGAGAAGTACAACAAGGTCATCGACTtg < 7:306527/142‑1 (MQ=255) cATCGGTGTTAACGACTTCGTTATCCCGGACGAGAAAGCCCGCATCATCGGTAACG‑CTACCGATGAAGTGAAGGAAATCGAGAGCCAGTACGCCTCCGGCCTGGTAACCCAGGGCGAGAAGTACAACAAGGTCATCGACTtg > 8:306527/1‑142 (MQ=255) tCGGTGTTAACGACTTCGTTATCCCGGACGAGAAAGCCCGCATCATCGGTAACG‑CTACCGATGAAGTGAAGGAAATCGAGAGCCAGTACGCCTCCGGCCTGGTAACCCAGGGCGAGAAGTACAACAAGGTCATCGACTTGTGGTCGAAg < 7:123182/149‑1 (MQ=255) tCGGTGTTAACGACTTCGTTATCCCGGACGAGAAAGCCCGCATCATCGGTAACG‑CTACCGATGAAGTGAAGGAAATCGAGAGCCAGTACGCCTCCGGCCTGGTAACCCAGGGCGAGAAGTACAACAAGGTCATCGACTTGTGGTCGAAg > 1:294109/1‑149 (MQ=255) ggTGTTAACGACTTCGTTATCCCGGACGAGAAAGCCCGCATCATCGGTAACG‑CTACCGATGAAGTGAAGGAAATCGAGAGCCAGTACGCCTCCGGCCTGGTAACCCAGGGCGAGAAGTACAACAAGGTCAGCGACTTGTGGTCGAAGGc > 6:288591/1‑149 (MQ=255) ttAACGACTTCGTTATCCCGGACGAGAAAGCCCGCATCATCGGTAACG‑CTACCGATGAAGTGAAGGAAATCGAGAGCCAGTACGCCTCCGGCCTGGTAACCCAGGGCGAGAAGTACAACAAGGTCATCGACTTGTGGTCGAAGGCGAac < 7:201239/149‑1 (MQ=255) aaCGACTTCGTTATCCCGGACGAGAAAGCCCGCATCATCGGTAACG‑CTACCGATGAAGTGAAGGAAATCGAGAGCCAGTACGCCTCCGGCCTGGTAACCCAGGGCGAGAAGTACAACAAGGTCATCGACTTGTGGTCGAAGGCGAacga > 3:157167/1‑149 (MQ=255) aCTTCGTTATCCCGGACGAGAAAGCCCGCATCATCGGTAACG‑CTACCGATGAAGTGAAGGAAATCGAGAGCCAGTACGCCTCCGGCCTGGTAACCCAGGGCGAGAAGTACAACAAGGTCATCGACTTGTGGTCGAAGGCGAACGACGaa < 8:274633/149‑1 (MQ=255) aCTTCGTTATCCCGGACGAGAAAGCCCGCATCATCGGTAACG‑CTACCGATGAAGTGAAGGAAATCGAGAGCCAGTACGCCTCCGGCCTGGTAACCCAGGGCGAGAAGTACAACAAGGTCATCGACTTGTGGTCGAAGGCGAACGACGaa < 8:197548/149‑1 (MQ=255) ttCGTTATCCCGGACGAGAAAGCCCGCATCATCGGTAACG‑CTACCGATGAAGTGAAGGAAATCGAGAGCCAGTACGCCTCCGGCCTGGTAACCCAGGGCGAGAAGTACAACAAGGTCATAGACTTGTGGTCGAAGGCTAACGACGAAgt > 6:240115/1‑149 (MQ=255) gTTATCCCGGACGAGAAAGCCCGCATCATCGGTAACG‑CTACCGATGAAGTGAAGGAAATCGAGAGCCAGTACGCCTCCGGCCTGGTAACCCAGGGCGAGAAGTACAACAAGGTCATCGACTTGTGGTCGAAGGCGAACGACGAAGTGTc < 5:68834/149‑1 (MQ=255) gTTATCCCGGACGAGAAAGCCCGCATCATCGGTAACG‑CTACCGATGAAGTGAAGGAAATCGAGAGCCAGTACGCCTCCGGCCTGGTAACCCAGGGCGAGAAGTACAACAAGGTCATCGACTCGTGGTCGAAGGCGAACGACGAAgtgt < 1:8445/148‑1 (MQ=255) ccGGACGAGAAAGCCCGCATCATCGGTAACG‑CTACCGATGAAGTGAAGGAAATCGAGAGCCAGTACGCCTCCGGCCTGGTAACCCAGGGCGAGAAGTACAACAAGGTCATCGACTtgtg < 8:90300/119‑1 (MQ=255) ccGGACGAGAAAGCCCGCATCATCGGTAACG‑CTACCGATGAAGTGAAGGAAATCGAGAGCCAGTACGCCTCCGGCCTGGTAACCCAGGGCGAGAAGTACAACAAGGTCATCGACTtgtg > 7:90300/1‑119 (MQ=255) ccGGACGAGAAAGCCCGCATCATCGGTAACG‑CTACCGATGAAGTGAAGGAAATCGAGAGCCAGTACGCCTCCGGCCTGGTAACCCAGGGCGAGAAGTACAACAAGGTCATCGACTTGTGGTCGAAGGCGAACGACGAAGTGTCCAAGGc > 7:50918/1‑149 (MQ=255) ggACGAGAAAGCCCGCATCATCGGTAACG‑CTACCGATGAAGTGAAGGAAATCGAGAGCCAGTACGCCTCCGGCCTGGTAACCCAGGGCGAGAAGTACAACAAGGTCATCGACTTGTGGTCGAAGGCGAACGACGAAGTGTCCAAGGCga < 1:17132/149‑1 (MQ=255) agaAAGCCCGCATCATCGGTAACG‑CTACCGATGAAGTGAAGGAAATCGAGAGCCAGTACGCCTCCGGCCTGGTAACCCAGGGCGAGAAGTACAACAAGGTCATCGACTTGTGGTCGAAGGCGAACGACGAAGTGTCCAAGGCGatgatg > 5:232095/1‑149 (MQ=255) cacGCATCATCCGTAACG‑CTAACGATGAAGTGAAGGAAATCGAGAGCCAGTACGCCTCCGGCCTGGTAACCCAGGGCGAGAAGTACAACAAGGTCATCGACTTGTGGTCGAAGGCGAACGACGAAGTGTCCAAGGCGATGATGGCCAAc < 8:285542/147‑1 (MQ=255) ccGCATCATCGGTAACG‑CTACCGATGAAGTGAAGGAAATCGAGAGCCAGTACGCCTCCGGCCTGGTAACCCAGGGCGAGAAGTACAACAAGGTCATCGACTTGTGGTCGAAGGCGAACGACGAAGTGTCCAAGGCGATGATGGCCAAcc < 7:74109/149‑1 (MQ=255) cacttcatcGGTAGCG‑TTACCGATGAAGTGAAGGAAATCGAGAGCCAGTACGCCTCCGGCCTGGTAACCCAGGGCGAGAAGTACAACAAGGTCATCGACTTGTGGTCGAAGGCGAACGACGAAGTGTCCAAGGCGATGATGGCCAACct > 8:87389/5‑149 (MQ=255) ttcatcGGTAGCG‑TTACCGATGAAGTGAAGGAAATCGAGAGCCAGTACGCCTCCGGCCTGGTAACCCAGGGCGAGAAGTACAACAAGGTCATCGACTTGTGGTCGAAGGCGAACGACGAAGTGTCCAAGGCGATGATGGCCAAACtctc > 7:131702/2‑149 (MQ=255) atcatcGGTAACG‑CTACCGATGAAGTGAAGGAAATCGAGAGCCAGTACGCCTCCGGCCTGGTAACCCAGGGCGAGAAGTACAACAAGGTCATCGACTTGTGGTCGAAGGCGAACGACGAAGTGTCCAAGGCGatgatg > 5:311570/1‑138 (MQ=255) atcatcGGTAACG‑CTACCGATGAAGTGAAGGAAATCGAGAGCCAGTACGCCTCCGGCCTGGTAACCCAGGGCGAGAAGTACAACAAGGTCATCGACTTGTGGTCGAAGGCGAACGACGAAGTGTCCAAGGCGatgatg < 6:311570/138‑1 (MQ=255) catcGGTAGCG‑TTACCGATGAAGTGAAGGAAATCGAGAGCCAGTACGCCTCCGGCCTGGTAACCCAGGGCGAGAAGTACAACAAGGTCATCGACTTGTGGTCGAAGGCGAACGACGAAGTGTCCAAGGCGATGATGGCCAACCTCTCg > 7:281647/1‑148 (MQ=255) atcGGTAACG‑CTACCGATGAAGTGAAGGAAATCGAGAGCCAGTACGCCTCCGGCCTGGTAACCCAGGGCGAGAAGTACAACAAGGTCATCGACTTGTGGTCGAAGGCGAACGACGAAGTGTCTAAGGCGATGATGGCCAACCTCTCGa > 7:214166/1‑148 (MQ=255) aCG‑CTACCGATGAAGTGAAGGAAATCGAGAGCCAGTACGCCTCCGGCCTGGTAACCCAGGGCGAGAAGTACAACAAGGTCATCGACTTGTGGTCGAAGGCGAACGACGAAGTGTCCAAGGCGATGATGGCCAACCTCTCGAAAGAGaa < 2:294109/148‑1 (MQ=255) cG‑CTACCGATGAAGTGAAGGAAATCGAGAGCCAGTACGCCTCCGGCCTGGTAACCCAGGGCGAGAAGTACAACAAGGTCATCGACTTGTGGTCGAAGGCGAACGACGAAGTGTCCAAGGCGATGATGGCCAACCTCTCGAAAGAGAAgg > 4:104385/1‑149 (MQ=255) g‑CTACCGATGAAGTGAAGGAAATCGAGAGCCAGTACGCCTCCTGCCTGGTAACCCAGGGCGAGATGTACAACAACGTCAACGACTTGTGGTCTAAGCCCAACGACGAACTGTCCAAGGCGATGATGGCAAACCTCTCGAAAGAGAAgg > 5:20057/1‑148 (MQ=255) | CTACCGCGTGGTTGGTCTGAAAGAGACCGTTATCTTCGCCGACCAACTGATGTACACCGGTTTCGCATACTCGACCATTTCCGGCGTTTCCATCGGTGTTAACGACTTCGTTATCCCGGACGAGAAAGCCCGCATCATCGGTAACG‑CTACCGATGAAGTGAAGGAAATCGAGAGCCAGTACGCCTCCGGCCTGGTAACCCAGGGCGAGAAGTACAACAAGGTCATCGACTTGTGGTCGAAGGCGAACGACGAAGTGTCCAAGGCGATGATGGCCAACCTCTCGAAAGAGAAGG > NC_002947/543584‑543876 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |