Predicted mutation | |||||||
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evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | NC_002947 | 565,991 | T→A | 8.4% | intergenic (+31/‑133) | katA → / → bfr‑I | catalase/bacterioferritin |
Read alignment evidence... | |||||||||||
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seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_002947 | 565,991 | 0 | T | A | 8.4% | 199.3 / 7.1 | 71 | intergenic (+31/‑133) | katA/bfr‑I | catalase/bacterioferritin |
Reads supporting (aligned to +/- strand): ref base T (29/36); new base A (4/2); total (33/38) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 4.06e-01 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.65e-01 |
GTACCATGGCGGGCGTCAGCGAAGATGTCATTCAGCGTCAGCTACAGTACTTCTTCAAGGCGGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTCACACTATGTGGCATAGACGTTTTCACATGGAGAATCAGGGCGATGCAAGG > NC_002947/565845‑566131 | gTACCATGGCGGGCGTCAGCGAAGATGTCATTCAGCGTCAGCTACAGTACTTCTTCAAGGCGGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTgg > 7:75349/1‑149 (MQ=255) tACCATGGCGGGCGTCAGCGAAGATGTCATTCAGCGTCAGCTACAGTACTTCTTCAAGGCTGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTggg < 5:4365/149‑1 (MQ=255) tACCATGCAGGGCGTCCGCGAACAAGTCATTCAGCGCCAGCTACCGTACTTCTTCAAGGCGGAGCCGTCTTACGGCGAAGGGAGTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCAGTTggc < 8:281305/149‑2 (MQ=255) cgTCAGCGAAGATGTCATTCAGCGTCAGCTACAGTACTTCTTCAAGGCGGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAAt < 7:145351/149‑1 (MQ=255) ggCGAAGATGTCATTCAGCGTCAGCTACAGTACTTCTTCAAGGCGGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCAAATGAGGGCGGttcttcttatca < 1:311424/147‑7 (MQ=255) gCGAAGATGTCATTCAGCGTCAGCTACAGTACTTCTTCAAGGCGGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAata > 6:251749/1‑149 (MQ=255) aaGATGTCATTCAGCGTCAGCTACAGTACTTCTTCAAGGCGGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCa < 1:92269/149‑1 (MQ=255) tGTCATTCAGCGTCAGCTACAGTACTTCTTCAAGGCGGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCacta < 8:75349/148‑1 (MQ=255) aTTCAGCGTCAGCTACAGTACTTCTTCAAGGCGGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGtt > 2:117062/1‑149 (MQ=255) gTCAGCTACAGTACTTCTTCAAGGCGGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGa > 4:159854/1‑149 (MQ=255) gTCAGCTACAGTACTTCTTCAAGGCGGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTAAATGAATATCACTAATGTTTAACCGa > 3:46420/1‑149 (MQ=255) aCAGTACTTCTTCAAGGCGGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTg > 1:181661/1‑149 (MQ=255) cAGTACTTCTTCAAGGCGGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGAATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGc > 8:64140/1‑149 (MQ=255) aGTACTTCTTCAAGGCGGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTgag > 5:244384/1‑147 (MQ=255) ttcttcAAGGCGGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGa > 5:217010/1‑149 (MQ=255) ttcttcAAGGCGGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGa > 8:274842/1‑149 (MQ=255) cttcAAGGCGGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGAtt > 4:287951/1‑149 (MQ=255) tcAAGGCGGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTgc > 2:168092/1‑149 (MQ=255) cAAGGCGGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGAtt < 6:128215/146‑1 (MQ=255) cAAGGCGGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTgc < 5:251749/148‑1 (MQ=255) aGGCGGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACGATTTAACCGATTAATTGCGTCAGATTGcgcg > 7:112727/1‑149 (MQ=255) gctgATCAGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGAATCAATCTCGCCTAAGTCGAAGTTATAAGAAGAACCGCCCTCATTTGGGc < 8:286707/89‑1 (MQ=255) gCGGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGc > 7:286707/1‑92 (MQ=255) cGGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGttt < 7:179841/149‑1 (MQ=255) tCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGTTTTTTCAATTAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCa > 3:38608/1‑149 (MQ=255) tCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGttttt > 6:146301/1‑147 (MQ=255) gCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGt < 8:23004/147‑1 (MQ=255) gCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTAAGTGa > 7:23004/1‑149 (MQ=255) cTTACTGCGATGGGTTTGCAAAGGCTTTGGGTTTCAATCTCGCCTAAGTCGTTTTGATTAGTTGAACCGCTCTGATTTGGGCGGTTTTTCAATGATTTTGACTTCTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGAc < 8:112727/149‑1 (MQ=255) aCGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCa > 6:279064/1‑148 (MQ=255) gCGAAGGGATTGCAAATGCTTTGGGCATCAATCTCGCCTTAGTCTAAGTTATTAGAAGAACCGCCCTCATTTTGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGa < 7:130239/149‑1 (MQ=255) gCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGt < 7:70057/102‑1 (MQ=255) gCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGt > 8:70057/1‑102 (MQ=255) gggATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACaaaa < 1:117062/149‑1 (MQ=255) gggATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACaaaa < 2:323918/149‑1 (MQ=255) gggATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACaaaa < 2:4345/149‑1 (MQ=255) aaaGGCTTTGGCCATCAATCTCGCCTAACTCGAAGAGATAAGAAGAACCGCCCTCATATGTGCCGTTTTTCAATGAATATCACTACTGTTTAACCGATTTAAAGCGACTGATTGCCCGTTTTTCAGTGACCATa > 2:7605/1‑134 (MQ=255) ggCTTTGGTCATCAATCTAGCCTAAGTCGAAGTGATAAGAAGAACCGCGCTCATTTGGGAGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTcaca < 8:153291/149‑1 (MQ=255) ggCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTCACACTAtgt < 1:168092/148‑1 (MQ=255) cATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTCACACTATGTgg > 3:16285/1‑148 (MQ=255) cATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCACATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTCACACTATGTGGc < 5:279064/149‑1 (MQ=255) aTCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTCACACTAtgtg < 4:250466/146‑1 (MQ=255) aTCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTCACACTAtgtg > 3:250466/1‑146 (MQ=255) aTCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTCACACTATGTGGCa < 7:274842/149‑1 (MQ=255) cAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGAGTTTTTAATTGACCATAGACAAAAGCTGGTTCACAATATGTGGCa > 8:151052/1‑147 (MQ=255) gCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTCACACTATGTGGCATAGACGttt < 6:217010/149‑1 (MQ=255) ccTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTCACACTATGTGGCATAGACGtttt < 4:115899/149‑1 (MQ=255) tAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTCACACTATGTGGCATAGa > 4:289148/1‑141 (MQ=255) tAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTCACACTATGTGGCATAGa < 3:289148/141‑1 (MQ=255) tCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTAAATGAATATCACTACTGTTTAACCGATTTTTTGCGTATGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTCACACTATGTGGCATAGACGTTTTCACATg < 6:244384/149‑1 (MQ=255) gAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTAAGTGACCATAGACAAAAGCTGGTTCACACTATGTGGCATAGACGTTTTCACATg > 3:160558/1‑147 (MQ=255) gAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTATGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTCACACTATGTGGCATAGACGTTTTCACATGga < 4:5463/149‑1 (MQ=255) aGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTCACACTATGTGGCATAGACGTTTTCACATGgaga < 2:181661/149‑1 (MQ=255) gATAATAATAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTTTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTCACACTATGTGGCATAGACGTTTTCACATGGAGAAt < 7:151052/148‑1 (MQ=255) gATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTgg < 1:212446/110‑1 (MQ=255) gATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTgg > 2:212446/1‑110 (MQ=255) aTAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCactac > 7:39140/1‑49 (MQ=255) aTAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCactac < 8:39140/49‑1 (MQ=255) tAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTCACACTATGTGGCATAGACGTTTTCACATGGAGAATCAg < 5:146301/149‑1 (MQ=255) ttgaaaaaCCGCCCAAATGAGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTCACACTATGTGGCATAGACGTTTTCACATGga < 1:161966/139‑1 (MQ=255) ttgaaaaaCCGCCCAAATGAGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTCACACTATGTGGCATAGACGTTTTCACATGga > 2:161966/3‑141 (MQ=255) agaagaACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTCACACTATGTGGCATAGACGTTTTCACATGGAGAATCAggg < 3:287951/149‑1 (MQ=255) gaaaaaCCGCCCAAATGAGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTCACACTATGTGGCATAGACGTTTTCACATGGAGAATCAGGGc > 7:131182/1‑149 (MQ=255) agaaCCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTCACACTATGTGGCATAGACGTTTTCACATGGAGAATCAGGGCGa > 5:204503/1‑149 (MQ=255) aaaaCCGCCCAAATGAGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTCACACTATGTGGCATAGACGTTTTCACATGGAGAATCAGGGCGa > 8:177068/3‑149 (MQ=255) aaCCGCCCAAATGAGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTCACACTATGTGGCATAGACGTTTTCACATGGAGAATCAGGGCGATg > 1:152342/1‑149 (MQ=255) aCCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTCACACTATGTGGCATAGACGTTTTCACATGGAGAATCAGGGCGATGc < 3:159854/149‑1 (MQ=255) gCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTCACACTATGTGGCATAGACGTTTTCACATGGAGAATCAGGGCGATGCAAg < 7:64140/149‑1 (MQ=255) cccTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTCACACTATGTGGCATAGACGTTTTCACATGGAGAATCAGGGCGATGCaa > 2:273527/1‑147 (MQ=255) cccTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTCACACTATGTGGCATAGACGTTTTCACATGGAGAATCAGGGCGATGCaa < 1:273527/147‑1 (MQ=255) cccTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTCACACTATGTGGCATAGACGTTTTCACATGGAGAATCAGGGCGATGCAAgg < 6:315571/149‑1 (MQ=255) | GTACCATGGCGGGCGTCAGCGAAGATGTCATTCAGCGTCAGCTACAGTACTTCTTCAAGGCGGATCCGGCTTACGGCGAAGGGATTGCAAAGGCTTTGGGCATCAATCTCGCCTAAGTCGAAGTGATAAGAAGAACCGCCCTCATTTGGGCGGTTTTTCAATGAATATCACTACTGTTTAACCGATTTTTTGCGTCTGATTGCGCGTTTTTCAGTGACCATAGACAAAAGCTGGTTCACACTATGTGGCATAGACGTTTTCACATGGAGAATCAGGGCGATGCAAGG > NC_002947/565845‑566131 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |