| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 566,626 | C→T | 6.6% | intergenic (+38/+35) | bfr‑I → / ← uvrA | bacterioferritin/uvrABC excinuclease protein A |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 566,626 | 0 | C | T | 6.6% | 218.2 / 3.0 | 76 | intergenic (+38/+35) | bfr‑I/uvrA | bacterioferritin/uvrABC excinuclease protein A |
| Reads supporting (aligned to +/- strand): ref base C (32/38); new base T (2/3); total (35/41) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.34e-01 | |||||||||||
CGTGCGCAGCTGGCCGACACCGAAGAAGATCACACCTACT‑GGCTTGAGAAGCAGCAGGGCCTGATCAAGGCCATCGGGCTGGAAAACTACCTGCAGTCGCAGATGTAAGTTATCCACAGACTCAAGTAAAAGCCCCTGGCACCATCGGTACCAGGGGCTTTTTCATT‑GCGCCGGCAATACTCAGGCCCTATCCCGCTCCAGCAATGGTTTCAGGTAATGGCCGGTATATGACTGCTTCATCTCGCTCAGCTCTTCTGGTGTACCGCAGGCAATGATCTGCCCACCCTTGGAACC > NC_002947/566481‑566774 | cgtgcgGAGCTGGCCGACACCGAAGAAGTACACACCTACTCCTCTTGAGAAGCAGCAGGGCCTGATCAAGGCCATCGGGCTGGAAAACTACCTGCAGTCGCAGATGTAAGTTATCCACAGACTCAAGTAAAAGCCCCTGGCACCATCgg < 1:272222/149‑1 (MQ=255) cgcAGCTGGCCGACACCGAAGAAGATCACACCTACT‑GGCTTGAGAAGCAGCAGGGCCTGATCAAGGCCATCGGGCTGGAAAACTACCTGCAGTCGCAGATGTAAGTTATCCACAGACTCAAGTAAAAGCCCCTGGCACCATCGGTAc > 2:100220/1‑147 (MQ=255) cgcAGCTGGCCGACACCGAAGAAGATCACACCTACT‑GGCTTGAGAAGCAGCAGGGCCTGATCAAGGCCATCGGGCTGGAAAACTACCTGCAGTCGCAGATGTAAGTTATCCACAGACTCAAGTAAAAGCCCCTGGCACCATCGGTACCa < 3:315137/149‑1 (MQ=255) gcAGCTGGCCGACACCGAAGAAGATCACACCTACT‑GGCTTGAGAAGCAGCAGGGCCTGATCAAGGCCATCGGGCTGGAAAACTACCTGCAGTCGCAGATGTAAGTTATCCACAGACTCAAGTAAAAGCCCCTGGCACCATCGGTACCAg < 3:197213/149‑1 (MQ=255) aGCTGGCCGACACCGAAGAAGATCACACCTACT‑GGCTTGAGAAGCAGCAGGGCCTGATCAAGGCCATCGGGCTGGAAAACTACCTGCAGTCGCAGATGTACGGGATCCACAGACTCAAGTAAAAGCCCCTGGCACCATCGGTACCAggg > 1:110053/1‑149 (MQ=255) aGCTGGCCGACACCGAAGAAGATCACACCTACT‑GGCTTGAGAAGCAGCAGGGCCTGATCAAGGCCATCGGGCTGGAAAACTACCTGCAGTCGCAGATGTAAGTTATCCACAGACTCAAGTAAAAGCCCCTGGCACCATCGGTACCAggg < 4:181341/149‑1 (MQ=255) ggCCGACACCGAAGAAGATCACACCTACT‑GGCTTGAGAAGCAGCAGGGCCTGATCAAGGCCATCGGGCTGGAAAACTACCTGCAGTCGCAGATGTAAGTTATCCACAGACTCAAGTAAAAGCCCCTGGCACCATCGGTACCAGGGGCtt > 1:292000/1‑149 (MQ=255) gCCGACACCGAAGAAGATCACACCTACT‑GGCTTGAGAAGCAGCAGGGCCTGATCAAGGCCATCGGGCTGGAAAACTACCTGCAGTCGCAGATGTAAGTTATCCACAGACTCAAGTAAAAGCCCCTGGTACCGATGGTGCCAGGGGCtt < 2:268586/148‑1 (MQ=255) acacCGAAGAAGATCACACCTACT‑GGCTTGAGAAGCAGCAGGGCCTGATCAAGGCCATCGGGCTGGAAAACTACCTGCAGTCGCAGATGTAAGTTATCCACAGACTCAAGTAAAAGCCCCTGGCACCATCGGTACCAGGGGCTTTTTCa < 3:310204/149‑1 (MQ=255) acCGAAGAAGATCACACCTACT‑GGCTTGAGAAGCAGCAGGGCCTGATCAAGGCCATCGGGCTGGAAAACTACCTGCAGTCGCAGATGTAAGTTATCCACAGACTCAAGTAAAAGCCCCTGGCACCATCGGTACCAGGGGCTTTTTCAtt < 2:211220/149‑1 (MQ=255) acCGAAGAAGATCACACCTACT‑GGCTTGAGAAGCAGCAGGGCCTGATCAAGGCCATCGGGCTGGAAAACTACCTGCAGTCGCAGATGTAAGTTATCCACAGACTCAAGTAAAAGCCCCTGGCACCATCGGTACCAGGGGCTTTTTCAtt > 2:217349/1‑149 (MQ=255) acCGAAGAAGATCACACCTACT‑GGCTTGAGAAGCAGCAGGGCCTGATCAAGGCCATCGGGCTGGAAAACTACCTGCAGTCGCAGATGTAAGTTATCCACAGACTCAAGTAAAAGCCCCTGGCACCATCGGTACCAGGGGCTTTTTCAtt > 6:246829/1‑149 (MQ=255) acCGAAGAAGATCACACCTACT‑GGCTTGAGAAGCAGCAGGGCCTGATCAAGGCCATCGGGCTGGAAAACTACCTGCAGTCGCAGATGTAAGTTATCCACAGACTCAAGTAAAAGCCCCTGGCACCATCGGTACCAGGGGCTTTTTCAtt < 5:223047/149‑1 (MQ=255) cGAAGAAGATCACACCTACT‑GGCTTGAGAAGCAGCAGGGCCTGATCAAGGCCATCGGGCTGGAAAACTACCTGCAGTCGCAGATGTAAGTTATCCACAGACTCAAGTAAAAGCCCCTGGCACCATCGGTACCAGGGGCTTTTTCATT‑gc < 4:15999/149‑1 (MQ=255) cGAAGAAGATCACACCTACT‑GGCTTGAGAAGCAGCAGGGCCTGATCAAGGCCATCGGGCTGGAAAACTACCTGCAGTCGCAGATGTAAGTTATCCACAGACTCAAGTAAAAGCCCCTGGCACCATCGGTACCAGGGGCTTTTTCATT‑gc < 6:147155/149‑1 (MQ=255) cGAAGAAGATCACACCTACT‑GGCTTGAGAAGCAGCAGGGCCTGATCAAGGCCATCGGGCTGGAAAACTACCTGCAGTCGCAGATGTAAGTTATCCACAGACTCAAGTAAAAGCCCCTGGCACCATCGGTACCAGGGGCTTTTTCATT‑gc > 6:120564/1‑149 (MQ=255) gaagaaGATCACACCTACT‑GGCTTGAGAAGCAGCAGGGCCTGATCAAGGCCATCGGGCTGGAAAACTACCTGCAGTCGCAGATGTAAGTTATCCACAGACTCAAGTAAAAGCCCCTGGCACCATCGGTACCAgggg > 6:244915/1‑136 (MQ=255) gaagaaGATCACACCTACT‑GGCTTGAGAAGCAGCAGGGCCTGATCAAGGCCATCGGGCTGGAAAACTACCTGCAGTCGCAGATGTAAGTTATCCACAGACTCAAGTAAAAGCCCCTGGCACCATCGGTACCAgggg < 5:244915/136‑1 (MQ=255) acacCTACT‑GGCTTGAGAAGCAGCAGGGCCTGATCAAGGCCATCGGGCTGGAAAACTACCTGCAGTCGCAGATGTAAGTTATCCACAGACTCAAGTAAAAGCCCCTGGCACCATCGGTACCAGGGGCTTTTTCATT‑GCGCCGGCAATa < 2:292000/148‑1 (MQ=255) cacCTACT‑GGCTTGAGAAGCAGCAGGGCCTGATCAAGGCCATCGGGCTGGAAAACTACCTGCAGTCGCAGATGTAAGTTATCCACAGACTCAAGTAAAAGCCCCTGGCACCATCGGTACCAGGGGCTTTTTCATT‑GCGCCGGCAATACt < 1:87632/149‑1 (MQ=255) acCTACT‑GGCTTGAGAAGCAGCAGGGCCTGATCAAGGCCATCGGGCTGGAAAACTACCTGCAGTCGCAGATGTAAGTTATCCACAGACTCAAGTAAAAGCCCCTGGCACCATCGGTACCAGGGGCTTTTTCATT‑GCGCCGGCAATACt > 5:314657/1‑148 (MQ=255) ccTACT‑GGCTTGAGAAGCAGCAGGGCCTGATCAAGGCCATCGGGCTGGAAAACTACCTGCAGTCGCAGATGTAAGTTATCCACAGACTCAAGTAAAAGCCCCTGGCACCATCGGTACCAGGGGCTTTTTCATT‑GCGCCGGCAATACTCa < 2:216964/149‑1 (MQ=255) cTACT‑GCCTTGAGAAGCAGCAGGGCCTGATCAAGGCCATCGGGCTGGAAAACTACCTGCAGTCGCAGATGTAAGTTATCCACAGACTCAAGTAAAAGCCCCTGGCACGATCGGTACCAGGGGCTTTTTCATT‑GCGCCGGCAATACTCAg < 7:81501/149‑1 (MQ=255) aCT‑GGCTTGAGAAGCAGCAGGGCCTGATCAAGGCCATCGGGCTGGAAAACTACCTGCAGTCGCAGATGTAAGTTATCCACAGACTCAAGTAAAAGCCCCTGGTACCGATGGTGCCAGGGGCttttactt < 3:225418/129‑5 (MQ=38) aCT‑GGCTTGAGAAGCAGCAGGGCCTGATCAAGGCCATCGGGCTGGAAAACTACCTGCAGTCGCAGATGTAAGTTATCCACAGACTCAAGTAAAAGCCCCTGGTACCGATGGTGCCAGGGGCttttactt > 4:225418/1‑125 (MQ=38) cT‑GGCTTGAGAAGCAGCAGGGCCTGATCAAGGCCATCGGGCTGGAAAACTACCTGCAGTCGCAGATGTAAGTTATCCACAGACTCAAGTAAAAGCCCCTGGCACCATCGGTACCAGGGGCTTTTTCATT‑GCGCCGGCAATACTCAGGcc < 1:217349/149‑1 (MQ=255) cT‑GCCTTGAGAAGCAGCAGGGCCTGATCAAGGCCATCGGGCTGGAAAACTACCTGCAGTCGCAGATGTAAGTTATCCACAGACTCAAGTAAAAGCCCCTGGCACCATCGGTACCAGGGGCTTTTTCATT‑GCGCCGGCAATACTCAGGcc > 7:249405/1‑149 (MQ=255) t‑GGCTTGAGAAGCAGCAGGGCCTGATCAAGGCCATCGGGCTGGAAAACTACCTGCAGTCGCAGATGTAAGTTATCCACAGACTCAAGTAAAAGCCCCTGGAACCATCGGTACCAGGGGCTTTTTCATT‑GCGCCGGCAATACTCAGGccc > 5:38603/1‑149 (MQ=255) gCTTGAGAAGCAGCAGGGCCTGATCAAGGCCATCGGGCTGGAAAACTACCTGCAGTCGCAGATGTAAGTTATCCACAGACTCAAGTAAAAGCCCCTGGCACCATCGGTACCAGGGGCTTTTTCATT‑GCGCCGGCAATACTCAGGACCTa > 2:265275/1‑149 (MQ=255) gagaAGCAGCAGGGCCTGATCAAGGCCATCGGGCTGGAAAACTACCTGCAGTCGCAGATGTAAGTTATCCACAGACTCAAGTAAAAGCCCCTGGCACCATCGGTACCAGGGGCTTTTTCATT‑GCGCCGGCAATACTCAGGCCCTATcc < 7:51093/148‑1 (MQ=255) cagGGCCTGATCAAGGCCATCGGGCTGGAAAACTACCTGCAGTCGCAGATGTAAGTTATCCACAGACTCAAGTAAAAGCCCCTGGCACCATAGGTACCAGCGGCTTTTTCATT‑GCGCCGGCAAAACTCAGGCCCTATCCCGCACCAGc > 8:19699/1‑148 (MQ=255) gggCCTGATCAAGGCCATCGGGCTGGAAAACTACCTGCAGTCGCAGATGTAAGTTATCCACAGACTCAAGTAAAAGCCCCTGGCACCATCGGTACCAGGGGCTTTTTCATT‑GCGCCGGCAATACTCAGGCCCTATCCCGCTCCAGCAAt < 8:249405/149‑1 (MQ=255) gATCAAGGCCATCGGGCTGGAAAACTACCTGCAGTCGCAGATGTAAGTTATCCACAGACTCAAGTAAAAGCCCCTGGCACCATCGGTACCAGGGGCTTTTTCATT‑GCGCCGGCAATACTCAGGCCCTATCCCGCTCCAGCAATGGttt > 4:245577/1‑148 (MQ=255) aTCAAGGCCATCGGGCTGGAAAACTACCTGCAGTCGCAGATGTAAGTTATCCACAGACTCAAGTAAAAGCCCCTGGCACCATCGGTACCAGGGGCTTTTTCATT‑GCGCCGGCAATACTCAGGCCCTATCCCGCTCCAGCAATGGTTTc < 6:38603/148‑1 (MQ=255) tCAAGGCCATCGTGCTGGAAAACTACCTGCAGTCGCAGATGTAAGTTATGCACAGACTCAAGTAAAAGCCCCTGGCACCAGCGGTACCAGGGGCTTTTTCATT‑GCGCCGGCAATACTCAGGCCCTATCCCGCTCCAGCAATGGTTTCAg < 6:274885/149‑1 (MQ=255) tCAAGGCCATCGGGCTGGAAAACTACCTTCAGTCGCAGATGTAAGTTATCCACAGACTCAAGTAAAAGCCCCTGGCACCATCGGTACCAGGGGCTTTTTCATT‑GCGCCGGCAATACTCAGGCCCTATCCCGCTCCAGCAATGGTTTCa < 7:19699/148‑1 (MQ=255) tCAAGGCCATCGGGCTGGAAAACTACCTGCAGTCGCAGATGTAAGTTATCCACAGACTCAAGTAAAAGCCCCTGGCACCATCGGTACCAGGGGCTTTTTCATT‑GCGCCGGCAATACTCAGGCCCTATCCCGCTCCAGCAATGGTTTCAg < 3:245577/149‑1 (MQ=255) ccATCGGGCTGGAAAACTACCTGCAGTCGCAGATGTAAGTTATCCACAGACTCAAGTAAAAGCCCCTGGCACCATCGGTACCAGGGGCTTTTTCATT‑GCGCCGGCAATACTCAGGCCCTATCCCGCTCCAGCAATGGTTTCAGGTAATg > 4:225485/1‑149 (MQ=255) aTCGGGCTGGAAAACTACCTGCAGTCGCAGATGTAAGTTATCCACAGACTCAAGTAAAAGCCCCTGGCACCATCGGTATCAGGGGCTTTTTCATT‑GCGCCGGCAATACTCAGGCCCTATCCCGCTCCAGCAATGGTTTCAGGTAATGGc > 1:313791/1‑149 (MQ=255) tGGAAAACTACCTGCAGTCGCAGATGTAAGTTATCCACAGACTCAAGTAAAAGCCCCTGGCACCATCGGTAACAGGGGCTTTTTCATT‑GCGCCGGCAATACTCAGGCCCTATCCCGCTCCAGCAATGGTTTCAGGTAATGGCCGGtata > 3:218399/1‑149 (MQ=255) ggAAAACTACCTGCAGTCGCAGATGTAAGTTATCCACAGACTCAAGTAAAAGCCCCTGGCACCATCGGTACCAGGGGCTTTTTCATT‑GCGCCGGCAATACTCAGGCCCTATCCCGCTCCAGCAATGGTTTCAGGTAATGGCCGGTatat > 7:115605/1‑149 (MQ=255) aaaCTACCTGCAGTCGCAGATGTAAGTTATCCACAGACTCAAGTAAAAGCCCCTGGCACCATCGGTACCAGGGGCTTTTTCATT‑GCGCCGGCAATACTCAGGCCCTATCCCGCTCCAGCAATGGTTTCAGGTAATGGCCGGTATATGAc < 5:202126/149‑1 (MQ=255) aaCTACCTGCAGTCGCAGATGTAAGTTATCCACAGACTCAAGTAAAAGCCCCTGGCACCATCGGTACCAGGGGCTTTTTCATT‑GCGCCGGCAATACTCAGGCCCTATCCCGCGCCAGCAATGGTTTCAGGTAATGGCCGGTATATGACt < 6:314657/149‑1 (MQ=255) ccTGCAGTCGCAGATGTAAGTTATCCACAGACTCAAGTAAAAGCCCCTGGCACCATCGGTACCAGGGGCTTTTTCATT‑GCGCCGGCAATACTCAGGCCCTATCCCGCTCCAGCAATGGTTTCAGGTAATGGCCg < 5:72837/134‑1 (MQ=255) ccTGCAGTCGCAGATGTAAGTTATCCACAGACTCAAGTAAAAGCCCCTGGCACCATCGGTACCAGGGGCTTTTTAATT‑GCGCCGGCAATACTCAGGCCCTATCCCGCTCCAGCAATGGTTTCAGGTAATGGCCg > 6:72837/1‑134 (MQ=255) tCGCAGATGTAAGTTATCCACAGACTCAAGTAAAAGCCCCTGGCACCATCGGTACCAGGGGCTTTTTCATT‑GCGCCGGCAATACTCAGGCCCTATCCCGCTCCAGCAATGGTTTCAGGTAATGGCCGGTATATGACTGCTTCATCTCGc > 8:9399/1‑149 (MQ=255) tGTAAGTTATCCACAGACTCAAGTAAAAGCCCCTGGCACCATCGGTACCAGGGGCTTTTTCATT‑GCGCCGGCAATACTCAGGCCCTATCCCGCTCCAGCAATGGTTTCAGGTAATGGCCGGTATTTGACTGCTTCATCTCGCTCAGctc < 5:120564/149‑1 (MQ=255) aGTTATCCACAGACTCAAGTAAAAGCCCCTGGCACCATCGGTACCAGGGGCTTTTTCATT‑GCGCCGGCAATACTCAGGCCCTATCCCGCTCCAGCAATGGTTTCAGGTAATGGCCGGTATATGACTGCTTCATCTCGCTCAGCtcttct > 7:186300/1‑149 (MQ=255) aGTTATCCACAGACTCAAGTAAAAGCCCCTGGCACCATCGGTACCAGGGGCTTTTTCATT‑GCGCCGGCAATACTCAGGCCCTATCCCGCTCCAGCAATGGTTTCAGGTAATGGCCGGTATATGACTGCTTCATCTCGCTCAGCtcttct < 1:100220/149‑1 (MQ=255) gTTATCCACAGACTCAAGTAAAAGCCCCTGGCACCATCGGTACCAGGGGCTTTTTCATT‑GCGCCGGCAATACTCAGGCCCTATCCCGCTCCAGCAATGGTTTCAGGTAATGGCCGGTATATGACTGCTTCATCTCGCTCAGCTCTTCTg < 5:246829/149‑1 (MQ=255) aTCCACAGACTCCAGTAAACTCCCCTCGCACCCTCGGTACCAGGGGCTTTTTCATT‑GCGCCGGCAATACTCAGGCCCTATCCCGCTCCAGCAATGGTTTCAGGTAATGGCCGGTATATGACAGCTTCATCTCGCTCAGCTCTTCTGgt < 8:236020/148‑1 (MQ=255) cacaGACTCAAGTAAAAGCCCCTGGCACCATCGGTACCAGGGGCTTTTTCATT‑GCGCCGGCAATACTCAGGCCCTATCCCGCTCCAGCAATGGTTTCAGGTAATGGCCGGTATATGACTGCTTc < 5:62546/124‑1 (MQ=255) cacaGACTCAAGTAAAAGCCCCTGGCACCATCGGTACCAGGGGCTTTTTCATT‑GCGCCGGCAATACTCAGGCCCTATCCCGCTCCAGCAATGGTTTCAGGTAATGGCCGGTATATGACTGCTTc > 6:62546/1‑124 (MQ=255) cacaGACTCAAGTAAAAGCCCCTGGCACCATCGGTACCAGGGGCTTTTTCATT‑GCGCCGGCAATACTCAGGCCCTATCCCGCTCCAGCAATGGTTTCAGGTAATGGCCGGTATATGACTGCTTCATCTCGCTCAGCTCTTCTGGTGTAc > 7:170432/1‑149 (MQ=255) cacaGACTCAAGTAAAAGCCCCTGGCACCATCGGTACCAGGGGCTTTTTCATT‑GCGCCGGCAATACTCAGGCCCTATCCCGCTCCAGCAATGGTTTCAGGTAATGGCCGGTATATGACTGCTTCATCTCGCTCAGCTCTTCTGGTGTAc < 8:170432/149‑1 (MQ=255) acaGACTCAAGTAAAAGCCCCTGGCACCATCGGTACCAGGGGCTTTTTCATT‑GCGCCGGCAATACTCAGGCCCTATCCCGCTCCAGCAATGGTTTCAGGTAATGGCCGGTATATGACTGCTTCATCTCGCTCAGCTCTTCTgtt > 2:317110/1‑142 (MQ=255) acaGACTCAAGTAAAAGCCCCTGGCACCATCGGTACCAGGGGCTTTTTCATT‑GCGCCGGCAATACTCAGGCCCTATCCCGCTCCAGCAATGGTTTCAGGTAATGGCCGGTATATGACTGCTTCATCTCGCTCAGCTCTTCTGgt < 1:317110/144‑1 (MQ=255) aGACTCAAGTAAAAGCCCCTGGCACCATCGGTACCAGGGGCTTTTTCATT‑GCGCCGGCAATACTCAGGCCCTATCCCGCTCCAGCAATGGTTTCAGGTAATGGCCGGTATATGACTGCTTCATCTCGCTCAGCTCTTCTGGTGTACCg > 2:210502/1‑148 (MQ=255) gACTCAAGTAAAAGCCCCTGGCACCATCGGTACCAGGGGCTTTTTCATT‑GCGCCGGCAATACTCAGGCCCTATCCCGCTCCAGCAATGGTTTCAGGTAATGGCCGGTATATGACTGCTTCATCTCGCTCAGCTCTTCTGGTGTACCGCa < 4:218399/149‑1 (MQ=255) tCAAGTAAAAGCCCCTGGCACCATCGGTACCAGGGGCTTTTTCATTGGCGCCGGCAATAGTCAGGCCGTATCCCGCTCCAGCATTGGTTTCAGGTAATGGCCGGTATATGACTGGTTCATCTCGCTCTGCTCTTCTGGTGTACCGCAgg > 1:235784/1‑149 (MQ=255) tCAAGTAAAAGCCCCTGGCACCATCGGTACCAGGGGCTTTTTCATT‑GCGCCGGCAATACTCAGGCCCTATCCCGCTCCAGCAATGGTTTCAGGTAATGGCCGGTATATGACTGCTTCATCTCGCTCAGCTCTTCTGGTGTACCGCAgg > 2:138457/1‑148 (MQ=255) aaGTAAAAGCCCCTCGCACAATCGCTACCAGGGGCGTTTTCATT‑GCGCCGGCAAAACTCAGGCCCTATCCCGCTCCAGCAATGGATTCAGGTAATGCGCGGTATATGACTGCTTCATCTCGCAGAGCGATTCTGGTGTACCGAAGGCaa > 8:226936/1‑149 (MQ=255) aaaaGCCCCTGGCACCATCGGTACCAGGGGCTTTTTCATT‑GCGCCGGCAATACTCAGGCCCTATCCCGCTCCAGCAATGGTTTCAGGTAATGGCCGGTATATGACTGCTTCATCTCGCTCAGCTCTTCTGGTGTACCGCAGGCAATGa > 6:201548/1‑148 (MQ=255) cccTGGTACCGATGGTGCCAGGGGCTTTTTCATT‑GCGCCGGCAATACTCAGGCCCTATCCCGCTCCAGCAATGGTTTCAGGTAATGGCCGGTATATGACTGCTTCATCTCGCTCAGCTCTTCTGGTGTACCGCAGGCAATg > 3:164720/1‑141 (MQ=255) cccTGGTACCGATGGTGCCAGGGGCTTTTTCATT‑GCGCCGGCAATACTCAGGCCCTATCCCGCTCCAGCAATGGTTTCAGGTAATGGCCGGTATATGACTGCTTCATCTCGCTCAGCTCTTCTGGTGTACCGCAGGCAATg < 4:164720/141‑1 (MQ=255) cTGGCACCATCGGTACCAGGGGCTTTTTCATT‑GCGCCGGCAATACTCAGGCCCTATCCCGCTCCAGCAATGGTTTCAGGTAATGGCCGGtata < 4:173790/93‑1 (MQ=255) cTGGCACCATCGGTACCAGGGGCTTTTTCATT‑GCGCCGGCAATACTCAGGCCCTATCCCGCTCCAGCAATGGTTTCAGGTAATGGCCGGtata > 3:173790/1‑93 (MQ=255) tGGCACCATCGGTACCAGGGGCTTTTTCATT‑GCGCCGGCAATACTCAGGCCCTATCCCGCTCCAGCAATGGTTTCAGGTAATGGCCGGTATATGACTGCTTCATCTCGCTCAGCTCTTCTGGTGTACCGCAGGCAATGATCTGc < 4:267770/144‑1 (MQ=255) tGGCACCATCGGTACCAGGGGCTTTTTCATT‑GCGCCGGCAATACTCAGGCCCTATCCCGCTCCAGCAATGGTTTCAGGTAATGGCCGGTATATGACTGCTTCATCTCGCTCAGCTCTTCTGGTGTACCGCAGGCAATGATCTGc > 3:267770/1‑144 (MQ=255) cACCATCGGTACCAGGGGCTTTTTCATT‑GCGCCGGCAATACTCAGGCCCTATCCCGCTCCAGCAATGGTTTCAGGTAATGGCCGGTATATGACTGCTTCATCTCGCTCAGCTCTTCTGGTGTACCGCAGGCAATGATCTGCCCACCCtt < 4:241992/149‑1 (MQ=255) aCCATCGGTACCAGGGGCTTTTTCATT‑GCGCCGGCAATACTCAGGCCCTATCCCGCTCCAGCAATGGTTTCAGGTAATGGCCGGTATATGACTGCTTAATCTCGCTCAGCTCTTCTGGTGTACCGCAGGCAATGATCTGCCCACCCTTg > 5:298901/1‑149 (MQ=255) cATCGGTACCAGGGGCTTTTTCATT‑GCGCCGGCAATACTCAGGCCCTATCCCGCTCCAGCAATGGTTTCAGGTAATGGCCGGTATATGACTGCTTCATCTCGCTCAGCTCTTCTGGTGTACCGCAGGCAATGATCTGCCCACCCTTgg > 2:143967/1‑148 (MQ=255) aTCGGTACCAGGGGCTTTTTCATT‑GCGCCGGCAATACTCAGGCCCTATCCCGCTCCAGCAATGGTTTCAGGTAATGGCCGGTATATGACTGCTTCATCTCGCTCAGCTCTTCTGGTGTACCGCAGGCAATGATCTGCCCACCCTTGGaa > 6:4503/1‑149 (MQ=255) aTCGGTACCAGGGGCTTTTTCATT‑GCGCCGGCAATACTCAGGCCCTATCCCGCTCCAGCAATGGTTTCAGGTAATGGCCGGTATATGACTGCTTCATCTCGCTCAGCTCTTCTGGTGTACCGCAGGCAATGATCTGCCCACCCTTGGaa < 8:186300/149‑1 (MQ=255) aTCGGTACCAGGGGCTTTTTCATT‑GCGCCGGCAATACTCAGGCCCTATCCCGCTCCAGCAATGGTTTCAGGTAATGGCCGGTATATGACTGCTTCATCTCGCTCAGCTCTTCTGGTGTACCGCAGGCAATGATCTGCCCACCCTTGGaa < 1:138457/149‑1 (MQ=255) tCGGTACCAGGGGCTTTTTCATT‑GCGCCGGCAATACTCAGGCCCTATCCCGCTCCAGCAATGGTTTCAGGTAATGGCCGGTATATGACTGCTTCATCTCGCTCAGCTCTTCTGGTGTACCGCAGGCAATGATCTGCCCACCCTTGGAAc < 7:9399/149‑1 (MQ=255) cGGTACCAGGGGCTTTTTCATT‑GCGCCGGCAATACTCAGGCCCTATCCCGCTCCAGCAATGGTTTCAGGTAATGGCCGGTATATGACTGCTTCATCTCGCTCAGCTCTTCTGGTGTACCGCAGGCAATGATCTGCCCACCCTTGGAAcc > 5:214239/1‑149 (MQ=255) | CGTGCGCAGCTGGCCGACACCGAAGAAGATCACACCTACT‑GGCTTGAGAAGCAGCAGGGCCTGATCAAGGCCATCGGGCTGGAAAACTACCTGCAGTCGCAGATGTAAGTTATCCACAGACTCAAGTAAAAGCCCCTGGCACCATCGGTACCAGGGGCTTTTTCATT‑GCGCCGGCAATACTCAGGCCCTATCCCGCTCCAGCAATGGTTTCAGGTAATGGCCGGTATATGACTGCTTCATCTCGCTCAGCTCTTCTGGTGTACCGCAGGCAATGATCTGCCCACCCTTGGAACC > NC_002947/566481‑566774 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |