| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 605,369 | G→A | 7.0% | G228S (GGC→AGC) | thiL → | thiamin monophosphate kinase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 605,369 | 0 | G | A | 7.0% | 209.6 / 3.9 | 72 | G228S (GGC→AGC) | thiL | thiamin monophosphate kinase |
| Reads supporting (aligned to +/- strand): ref base G (30/36); new base A (3/2); total (33/39) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.58e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.08e-01 | |||||||||||
CGCAGGCCGAGCCGCTGCTGGCTCATTACTGGTCACCGATGCCGCAGCTCACCCTCGGGGCTCTGCTGCGTGGCAAGGCCACTGCGGCCCTGGACATTTCCGATGGCCTGCTCGCTGACTGCGGGCATATCGCCAAGGCCTCCGGCGTGGCGCTGGAGGTGAACCTGGCGCAGGTGCCAGTGTCTCCTGCCTTAGAGGCATTCCTCGGGCGCGAAGCGGCGTTGCAGGCAGCACTCACCGGTGGCGACGACTATGTACTGGCCTTCACCTTGCCGCCCGAAGCGCTGGC > NC_002947/605226‑605514 | cgcAGGCCGAGCCGCTGCTGGCTCATTACTGGTCACCGATGCCGCAGCTCACCCTCGGGGCTCTGCTGCGTGGCAAGGCCACTGCGGCCCTGGACATTTCCGATGGCCTGCTCGCTGACTGCGGGCATATCGCCAAGGCCTCCGGCGTg < 6:249543/149‑1 (MQ=255) cAGGCCGAGCCGCTGCTGGCTCATTACTGGTCACCGATGCCGCAGCTCACCCTCGGGGCTCTGCTGCGTGGCAAGGCCACTGCGGCCCTGGACATTTCCGATGGCCTGCTCGCTGACTGCGGGCATATCGCCAAGGCCTCCGGCGTGgc < 6:312696/149‑1 (MQ=255) cAGGCCGAGCCGCTGCTGGCTCATTACTGGTCACCGATGCCGCAGCTCACCCTCGGGGCTCTGCTGCGTGGCAAGGCCACTGCGGCCCTGGACATTTCCGATGGCCTGCTCGCTGACTGCGGGCATATCGCCAAGGCCTCCGGCGTGgc < 5:287186/149‑1 (MQ=255) gCCGAGCCGCTGCTGGCTCATTACTGGTCACCGATGCCGCAGCTCACCCTCGGGGCTCTGCTGCGTGGCAAGGCCACTGCGGCCCTGGACATTTCCGATGGCCTGCTCGCTGACTGCGGGCATATCGCCAAGGCCTCCGGCGTGGCGCt < 8:98113/149‑1 (MQ=255) gCCGAGCCGCTGCTGGCTCATTACTGGTCACCGATGCCGCAGCTCACCCTCGGGGCTCTGCTGCGTGGCAAGGCCACTGCGGCCCTGGACATTTCCGATGGCCTGCTCGCTGACTGCGGGCATATCGCCAAGGCCTCCGGCGTGGCGCt < 2:271561/149‑1 (MQ=255) gAGCCGCTGCTGGCTCATTACTGGTCACCGATGCCGCAGCTCACCCTCGGGGCTCTGCTGCGTGGCAAGGCCACTGCGGCCCTGGACATTTCCGATGGCCTGCTCGCTGACTGCGGGCATATCGCCAAGGCCTCCGGCGTGGCGCTg > 7:243587/1‑147 (MQ=255) aGCCGCTGCTGGCGCATTACTGGTCACCGATGCCGCAGCTCACCCTCGGGGCTCTGCTGCGTGGCAAGGCCACTGCGGCCCTGGACATTTCCGATGGCCTGCTCGCTGACTGCGGGCATATCGCCAAGGCCTCCGGCGTGGCGCTGGAg < 4:188923/149‑1 (MQ=255) ccGCTGCTGGCTCATTACTGGTCACCGATGCCGCAGCTCACCCTCGGGGCTCTGCTGCGTGGCAAGGCCACTGCGGCCCTGGACATTTCCGATGGCCTGCTCGCTGACTGCGGGCATATCGCCAAGGCCTCCGGCGTGGCGCTGGAGGt > 5:226129/1‑149 (MQ=255) gctgctGGCTCATTACTGGTCACCGATGCCGCAGCTCACCCTCGGGGCTCTGCTGCGTGGCAAGGCCACTGCGGCCCTGGACATTTCCGATGGCCTGCTCGCTGACTGCGGGCATATCGCCAAGGCCTCCGGCGTTGCGCTGGAGGTg > 8:55635/1‑148 (MQ=255) ctgctgGCTCATTACTGGTCACCGATGCCGCAGCTCACCCTCGGGGCTCTGCTGCGTGGCAAGGCCACTGCGGCCCTGGACATTTCCGATGGCCTGCTCGCTGACTGCGGGCATATCGCCAAGGCCTCCGGCGTGGCGCTGGAGGTGaa > 1:250615/1‑149 (MQ=255) gCTCATTACTGGTCACCGATGCCGCAGCTCACCCTCGGGGCTCTGCTGCGTGGCAAGGCCACTGCGGCCCTGGACATTTCCGATGGCCTGCTCGCTGACTGCGGGCATATCGCCAAGGCCTCCAGCGCCACGCCGGAggcct > 4:148570/1‑139 (MQ=255) gCTCATTACTGGTCACCGATGCCGCAGCTCACCCTCGGGGCTCTGCTGCGTGGCAAGGCCACTGCGGCCCTGGACATTTCCGATGGCCTGCTCGCTGACTGCGGGCATATCGCCAAGGCCTCCAGCGCCACGCCGGAggcct < 3:148570/142‑4 (MQ=255) aTTACTGGTCACCGATGCCGCAGCTCACCCTCGGGGCTCTGCTGCGTGGCAAGGCCACTGCGGCCCTGGACATTTCCGATGGCCTGCTCGCTGACTGCGGGCATATCGCCAAGGCCTCCGGCGTGGCGCTGGAGGTGAACCTGGCGCAg < 7:293402/149‑1 (MQ=255) ttACTGGTCACCGATGCCGCAGCTCACCCTCGGGGCTCTGCTGCGTGGCAAGGCCACTGCGGCCCTGGACATTTCCGATGGCCTGCTCGCTGACTGCGGGCATATCGCCAAGGCCTCCGGCGTGGCGCTGGAGGTGAACCTGGCGCAgg < 1:98724/149‑1 (MQ=255) gTCACCGCTGCCGCAGCGCACCCTCGGGGCTCTGCTGCGGGGCAAGGCCACTGCGGCCCTGGACATTTCCGATGGCCTGCTCGCTGACTGCGGGCATATCGCCAAGGCCTCCGGCGTGGCGCTGGAGGTGAACCTGGCGCAGGTGCCAg < 4:101810/149‑1 (MQ=255) gTCACCGATGCCGCAGCTCACCCTCGGGGCTCTGCTGCGTGGCAAGGCCACTGCGGCCCTGGACATTTCCGATGGCCTGCTCGCTGACTGCGGGCATATCGCCAAGGCCTCCGGCGTGGCGCTGGAGGTGAACCTGGCGCAGGt < 8:289555/144‑1 (MQ=255) gTCACCGATGCCGCAGCTCACCCTCGGGGCTCTGCTGCGTGGCAAGGCCACTGCGGCCCTGGACATTTCCGATGGCCTGCTCGCTGACTGCGGGCATATCGCCAAGGCCTCCGGCGTGGCGCTGGAGGTGAACCTGGCGCAGGt > 7:289555/1‑144 (MQ=255) gTCACCGATGCCGCAGCTCACCCTCGGGGCTCTGCTGCGTGGCAAGGCCACTGCGGCCCTGGACATTTCCGATGGCCTGCTCGCTGACTGCGGGCATATCGCCAAGGCCTCCGGCGTGGCGCTGGAGGTGAACCTGGCGCAGGTGCCa < 8:114845/148‑1 (MQ=255) gTCACCGATGCCGCAGCTCACCCTCGGGGCTCTGCTGCGTGGCAAGGCCACTGCGGCCCTGGACATTTCCGATGGCCTGCTCGCTGACTGCGGGCATATCGCCAAGGCCTCCAGCGCCACGCCGGAggcct > 3:282007/1‑128 (MQ=255) gTCACCGATGCCGCAGCTCACCCTCGGGGCTCTGCTGCGTGGCAAGGCCACTGCGGCCCTGGACATTTCCGATGGCCTGCTCGCTGACTGCGGGCATATCGCCAAGGCCTCCAGCGCCACGCCGGAggcct < 4:282007/131‑4 (MQ=255) tCACCGATGCCGCAGCTCACCCTCGGGGCTCTGCTGCGTGGCAAGGCCACTGCGGCCCTGGACATTTCCGATGGCCTGCTCGCTGACTGCGGGCATATCGCCAAGGCCTCCGGCGTGGCGCTGGAGGTGAACCTGGCGCAGGTGCCAgt > 8:88194/1‑149 (MQ=255) tCACCGATGCCGCAGCTCACCCTCGGGGCTCTGCTGCGTGGCAAGGCCACTGCGGCCCTGGACATTTCCGATGGCCTGCTCGCTGACTGCGGGCATATCGCCAAGGCCTCCGGCGTGGCGCTGGAGGTGAACCTGGCGCAGGTGCCAgt < 3:204728/149‑1 (MQ=255) tCACCGATGCCGCAGCTCACCCTCGGGGCTCTGCTGCGTGGCAAGGCCACTGCGGCCCTGGACATTTCCGATGGCCTGCTCGCTGACTGCGGGCATATCGCCAAGGCCTCCGGCGTGGCGCTGGAGGTGAACCTGGCGCAGGTGCCAgt > 2:232614/1‑149 (MQ=255) gATGCCGCAGCTCACCCTCGGGGCTCTGCTGCGTGGCAAGGCCACTGCGGCCCTGGACATTTCCGATGGCCTGCTCGCTGACTGCGGGCATATCGCCAAGGCCTCCGGCGTGGCGCTGGAGGTGAACCTGGCGCAGGTGCCAGTGgctc < 6:108938/149‑1 (MQ=255) ccGCAGCTCACCCTCGGGGCTCTGCTGCGTGGCAAGGCCACTGCGGCCCTGGACATTTCCGATGGCCTGCTCGCTGACTGCGGGCATATCGCCAAGGCCTCCGGCGTGGCGCTGGAGGTGAACCTGGCGCAGGTGCCAGTGTCTCCTGc < 1:161737/149‑1 (MQ=255) aGCTCACCCTCGGGGCTCTGCTGCGTGGCAAGGCCACTGCGGCCCTGGACATTTCCGATGGCCTGCTCGCTGACTGCGGGCATATCGCCAAGGCCTCCGGCGTGGCGCTGGAGGTGAACCTGGCGCAGGTGCCAGTGTCTCCTGCCTTa < 3:119548/149‑1 (MQ=255) aCCCTCGGGGCTCTGCTGCGTGGCAAGGCCACTGCGGCCCTGGACATTTCCGATGGCCTGCTCGCTGACTGCGGGCATATCGCCAAGGCCTCCGGCGTGGCGCTGGAGGTGAACCTGgcgc > 8:147280/1‑121 (MQ=255) aCCCTCGGGGCTCTGCTGCGTGGCAAGGCCACTGCGGCCCTGGACATTTCCGATGGCCTGCTCGCTGACTGCGGGCATATCGCCAAGGCCTCCGGCGTGGCGCTGGAGGTGAACCTGgcgc < 7:147280/121‑1 (MQ=255) aCCCTCGGGGCTCTGCTGCGTGGCAAGGCCACTGCGGCCCTGGACATTTCCGATGGCCTGCTCGCTGACTGCGGGCATATCGCCAAGGCCTCCGGCGTGGCGCTGGAGGTGAACCTGGCGCAGGTGCCAGTGTCTCCTGCCTTAGAgg > 7:80192/1‑148 (MQ=255) aCCCTCGGGGCTCTGCTGCGTGGCAAGGCCACTGCGGCCCTGGACATTTCCGATGGCCTGCTCGCTGACTGCGGGCATATCGCCAAGGCCTCCGGCGTGGCGCTGGAGGTGAACCTGGCGCAGGTGCCAGTGTCTCCTGCCTTAGAgg > 8:85285/1‑148 (MQ=255) aCCCTCGGGGCTCTGCTGCGTGGCAAGGCCACTGCGGCCCTGGACATTTCCGATGGCCTGCTCGCTGACTGCGGGCATATCGCCAAGGCCTCCGGCGTGGCGCTGGAGGTGAACCTGGCGCAGGTGCCAGTGTCTCCTGCCTTAGAGGc < 5:110150/149‑1 (MQ=255) ccTCGGGGCTCTGCTGCGTGGCAAGGCCACTGCGGCCCTGGACATTTCCGATGGCCTGCTCGCTGACTGCGGGCATATCGCCAAGGCCTCCGGCGTGGCGCTGGAGGTGAACCTGGCGCAGGTGCCAGTGTCTCCTGCCTTAGAGGCAt > 7:173783/1‑149 (MQ=255) tCGGGGCTCTGCTGCGTGGCAAGGCCACTGCGGCCCTGGACATTTCCGATGGCCTGCTCGCTGACTGCGGGCATATCGCCAAGGCCTCCGGCGTGGCGCTGGAGGTGAACCTGGCGCAGGTGCCAGTGTCTCCTGCCTTAGAGGCATTc > 7:78205/1‑149 (MQ=255) ctctGCTGCGTGGCAAGGCCACTGCGGCCCTGGACATTTCCGATGGCCTGCTCGCTGACTGCGGGCATATCGCCAAGGCCTCCGGCGTGGCGCTGGAGGTGAACCTGGCGCAGGTGCCa > 5:175099/1‑119 (MQ=255) ctctGCTGCGTGGCAAGGCCACTGCGGCCCTGGACATTTCCGATGGCCTGCTCGCTGACTGCGGGCATATCGCCAAGGCCTCCGGCGTGGCGCTGGAGGTGAACCTGGCGCAGGTGCCa < 6:175099/119‑1 (MQ=255) tgcGTGGCAAGGCCACTGCGGCCCTGGACATTTCCGATGGCCTGCTCGCTGACTGCGGGCATATCGCCAAGGCCTCCGGCGTGGCGCTGGAGGTGAACCTGgc < 1:146314/103‑1 (MQ=255) tgcGTGGCAAGGCCACTGCGGCCCTGGACAATTCCGATGGCATGCTCTCTGACTGCGCGAATATCGCCAAGGCCTCCGGCGTGTCGCAGGAGGTGAACCTGgc > 2:146314/1‑103 (MQ=255) gTGGCAAGGCCACTGCGGCCCTGGACATTTCCGATGGCCTGCTCGCTGACTGCGGGCATATCGCCAAGGCCTCCGGCGTGGCGCTGGAGGTGAACCTGGCGCAGGTGCCAGTGTCTCCTGCCTTAGAGGCATTCCTCGGGCGCGAAgcg < 8:80192/149‑1 (MQ=255) gCAAGGCCACTGCGGCCCTGGACATTTCCGATGGCCTGCTCGCTGACTGCGGGCATATCGCCAAGGCCTCCGGCGTGGCGCTGGAGGTGAACCTGGCGCAGGTGCCAGTGTCTCCTGCCTTAGAGGCATTCCTCGGGCGCGAAgcggcg > 1:46775/1‑149 (MQ=255) aaGGCCACTGCGGCCCTGGACATTTCCGATGGCCTGCTCGCTGACTGCGGGCATATCGCCAAGGCCTCCGGCGTGGCGCTGGAGGTGAACCTGGCGCAGGTGCCAGTGTCTCCTGCCTTAGAGGCATTCCTCGGGCGCGAAGCGGCGtt < 4:297267/149‑1 (MQ=255) gCCACTGCGGCCCTGGACATTTCCGATGGCCTGCTCGCTGACTGCGGGCATATCGCCAAGGCCTCCGGCGTGGCGCTGGAg > 3:126765/1‑81 (MQ=255) gCCACTGCGGCCCTGGACATTTCCGATGGCCTGCTCGCTGACTGCGGGCATATCGCCAAGGCCTCCGGCGTGGCGCTGGAg < 4:126765/81‑1 (MQ=255) gCCACTGCGGCCCTGGACATTTCCGATGGCCTGCTCGCTGACTGCGGGCATATCGCCAAGGCCTCCGGCGTGGCGCTGGAGGTGAACCTGGCGCAGGTGCCAGTGTCTCCTGCCTTAGAGGCATTCCTCGGGCGCGAAGCGGCGTTgca < 1:232614/149‑1 (MQ=255) gCCACTGCGGCCCTGGACATTTCCGATGGCCTGCTCGCTGACTGCGGGAATATCTCCAAGGCCTCCGGCGTGGCGCTGGAGGTGAACATGGCGCAGGTGCCAGTGTCTCCTGCCTTAGAGGCATTCCTAGGGCGAGAAGCGTCGTTg > 4:199930/1‑147 (MQ=255) cGGCCCTGGACATTTCCGATGGCCTGCTCGCTGACTGCGGGCATATCGCCAAGGCCTCCGGCGTGGCGCTGGAGGTGAACCTGGCGCAGGTGCCAGTGTCTCCTGCCTTAGAGGCATTCCTCGGGCGCGAAGCGGCGTTgcaggcag < 8:78205/147‑1 (MQ=255) acTGGACATTTCCGATGGCCTGCTCGCTGACTGCGGGCATATCGCCAAGGCCTCCGGCGTGGCGCTGGAGGTGAACCTGGCGCAGGTGCCAGTGTCTCCTGCCTTAGAGGCATTCCTCGGGCGCGAAGCGGCGTTGCAGGCAGCACTCa > 8:224336/2‑149 (MQ=255) cTGGACATTTCCGATGGCCTGCTCGCTGACTGCGGGCATATCGCCAAGGCCTCCGGCGTGGCGCTGGAGGTGAACCTGGCGCAGGTGCCAGTGTCTCCTGCCTTAGAGGCATTCCTCGGGCGCGAAGCGGCGTTGCAGGCAGCACTCAc > 1:237676/1‑149 (MQ=255) cATTTCCGATGGCCTGCTCGCTGACTGCGGGCATATCGCCAAGGCCTCCGGCGTGGCGCTGGAGGTGAACCTGGCGCAGGTGCCAGTGTCTCCTGCCTTAGAGGCATTCCTCGGGCGCGAAGCGGCGTTGCAGGCAGCACTCACCGGTg < 7:224336/149‑1 (MQ=255) ttCCGATGGCCTGCTCGCTGACTGCGGGCATATCGCCAAGGCCTCCGGCGTGGCGCTGGAGGTGAACCTGGCGCAGGTGCCAGTGTCTCCTGCCTTAGAGGCATTCCTCGGGCGCGAAGCGGCGTTGCAGGCAGCACTCACCGGTGGc > 8:140906/1‑148 (MQ=255) ccGATTGCCTGCTCGCTGACTGCGGGCATATCGCCAAGGCCTCCGGCGTGGCGCTGGAGGTGAACCTGGCGCAGGTGCCAGTGTCTCCTGCCTTAGAGGCATTCCTCGGGCGCGAAGCGGCGTTGCAGGCAGCACTCACCgtattcgc < 6:226129/148‑8 (MQ=255) ccGATGGCCTGCTCGCTGACTGCGGGCATATCGCCAAGGCCTCCGGCGTTGCGCTGGAGGTGAACCTGGCGCAGGTGCCAGTGTCTCCTGCCTTAGAGGCATTCCTCGGGCGCGAAGCGGCGTTGCAGGCAGCACTCACCGGTGGcga < 7:55635/148‑1 (MQ=255) cGATGGCCTGCTCGCTGACTGCGGGCATATCGCCAAGGCCTCCGGCGTg < 6:265376/49‑1 (MQ=255) cGATGGCCTGCTCGCTGACTGCGGGCATATCGCCAAGGCCTCCGGCGTg > 5:265376/1‑49 (MQ=255) cGATGGCCTGCTCGCTGACTGCGGGCATATCGCCAAGGCCTCCGGCGTGGCGCTGGAGGTGAACCTGGCGCAGGTGCCAGTGTCTCCTGCCTTAGAGGCATTCCTCGGGCGCGAAGCGGCGTTGCAGGCAGCACTCACCGGTGGcgac > 5:126290/1‑148 (MQ=255) gATGGCCTTCTCGCAGACTTAGGGAATATCGGCAAGGACTCCTTCGTGGCGCTGGAGGTGAACCTGGCGCAGTTGCCAGTGTCTCCTGCCTTAGATGCATTCCTCGGGCGCGAAGCGGCGTTGCAGGCAGCACTCACCGGTGGcgacga < 4:212699/149‑1 (MQ=255) gATGGCCTGCTCGCTGACTGCGGGCATATCGCCAAGGCCTCCGGCGTGGCGCTGGAGGTGAACCTGGCGCAGGTGCCAGTGTCTCCTGCCTTAGAGGCATTCCTCGGGCGCGAAGCGGCGTTGCAGGCAGCACTCACCGGTGGcgacga < 7:300532/149‑1 (MQ=255) gATGGCCTGCTCGCTGACTGCGGGCATATCGCCAAGGCCTCCGGCGTGGCGCTGGAGGTGAACCTGGCGCAGGTGCCAGTGTCTCCTGCCTTAGAGGCATTCCTCGGGCGCGAAGCGGCGTTGCAGGCAGCACTCACCGGTGGcgacga < 5:269720/149‑1 (MQ=255) cTGCTCGCTGACTGCGGGCATATCGCCAAGGCCTCCGGCGTGGCGCTGGAGGTGAACCTGGCGCAGGTGCCAGTGTCTCCTGCCTTAGAGGCATTCCTCGGGCGCGAAGCGGCGTTGCAGGCAGCACTCACCGGTGGCGACGACTATg > 3:71379/1‑148 (MQ=255) gCTGACTGCGGGCGTATCGCCAAGGCCTCCGGCGTGGCGCTGGAGGTGAACCTGGCGCAGGTGCCAGTGTCTCCTGCCTTAGAGGCATTCCTCGGGCGCGAAGCGGCGTTgcaggcag < 7:173398/118‑1 (MQ=255) gCTGACTGCGGGCGTATCGCCAAGGCCTCCGGCGTGGCGCTGGAGGTGAACCTGGCGCAGGTGCCAGTGTCTCCTGCCTTAGAGGCATTCCTCGGGCGCGAAGCGGCGTTgcaggcag > 8:173398/1‑118 (MQ=255) gCTGACTGCGGGCATATCGCCAAGGCCTCCGGCGTGGCGCTGGAGGTGAACCTGGCGCAGGTGCCAGTGTCTCCTGCCTTAGAGGCATTCCTCGGGCGCGAAGCGGCGTTGCAGGCAGCACTCACCGGTGGCGACGACTATGTACTg < 7:85285/147‑1 (MQ=255) gCTGACTGCGGGCATATCGCCAAGGCCTCCGGCGTGGCGCTGGAGGTGAACCTGGCGCAGGTGCCAGTGTCTCCTGCCTTAGAGGCATTCCTCGGGCGCGAAGCGGCGTTGCAGGCAGCACTCACCGGTGGCGACGACTATGTACTGGc > 5:17228/1‑149 (MQ=255) gggCATATCGCCAAGGCCTCCGGCGTGGCGCTGGAGGTGAACCTGGCGCAGGTGCCAGTGTCTCCTGCCTTAGAGGCATTCCTCGGGCGCGAAGCGGCGTTGCAGGCAGCACTCACCGGTGGCGACGACTATGTACTGGCCTTCACCtt < 6:17228/149‑1 (MQ=255) ggCATATCGCCAAGGCCTCCGGCGTGGCGCTGGAGGTGAACCTGGCGCAGGTGCCAGTGTCTCCTGCCTTAGAGGCATTCCTCGGGCGCGAAGCGGCGTTGCAGGCAGCACTCACCGGTGGCGACGACTATGTACTGGCCTTCACCTTg < 2:46775/149‑1 (MQ=255) tatCGCCAAGGCCTCCGGCGTGGCGCTGGAGGTGAACCTGGCGCAGGTGCCAGTGTCTCCTGCCTTAGAGGCATTCCTCGGGCGCGAAGCGGCGTTGCAGGCAGCACTCACCGGTGGCGACGACTATGTACTGGCCTTCACCTTgccgc > 7:108542/1‑149 (MQ=255) atCGCCAAGGCCTCCGGCGTGGCGCTGGAGGTGAACCTGGCGCAGGTGCCAGTGTCTCCTGCCTTAGAGGCATTCCTCGGGCGCGAAGCGGCGTTGCAGGCAGCACTCACCGGTGGCGACGACTATGTACTGGCCTTCACCTTgccgcc > 5:5278/1‑149 (MQ=255) tCGCCAAGGCCTCCGGCGTGGCGCTGGAGGTGAACCTGGCGCAGGTGCCAGTGTCTCCTGCCTTAGAGGCATTCCTCGGGCGCGAAGCGGCGTTGCAGGCAGCACTCACCGGTGGCGACGACTATGTACTGGCCTTCACCTTGCCGccc > 4:176079/1‑149 (MQ=255) cGCCAAGGCCTCCGGCGTGGCGCTGGAGGTGAACCTGGCGCAGGTGCCAGTGTCTCCTGCCTTAGAGGCATTCCTCGGGCGCGAAGCGGCGTTGCAGGCAGCACTCACCGGTGGCGACGACTATGTACTGGCCTTCACCTTGCCGccc > 3:276717/1‑148 (MQ=255) ggCCTCCGGCGTGGCGCTGGAGGTGAACCTGGCGCAGGTGCCAGTGTCTCCTGCCTTAGAGGCATTCCTCGGGCGCGAAGCGGCGTTGCAGGCAGCACTCACCGGTGGCGACGACTATGTACTGGCCTTCACCTTGCCGCCCGAAgcgc < 2:250615/149‑1 (MQ=255) gCCTCCGGCGTGGCGCTGGAGGTGAACCTGGCGCAGGTGCCAGTGTCTCCTGCCTTAGAGGCATTCCTCGGGCGCGAAGCGGCGTTGCAGGCAGCACTCACCGGTGGCGACGACTATGTACTGGCCTTCACCTTGCCGCCCGAAGCGCt < 7:140906/149‑1 (MQ=255) tCCGGCGTGGCGCTGGAGGTGAACCTGGCGCAGGTGCCAGTGTCTCCTGCCTTAGAGGCATTCCTCGGGCGCGAAGCGGCGTTGCAGGCAGCACTCACCGGTGGCGACGACTATGTACTGGCCTTCACCTTGCCGCCCGAAGCGCTGgc > 6:61842/1‑149 (MQ=255) tCCAGCGTGGCGCTGGAGGTGAACCTGGCGCAGGTGCCAGTGTCTCCTGCCTTAGAGGCATTCCTCGGGCGCGAAGCGGCGTTGCAGGCAGCACTCACCGGTGGCGACGACTATGTACTGGCCTTCACCTTGCCGCCCGAAGCGCTGgc > 1:134613/1‑149 (MQ=255) | CGCAGGCCGAGCCGCTGCTGGCTCATTACTGGTCACCGATGCCGCAGCTCACCCTCGGGGCTCTGCTGCGTGGCAAGGCCACTGCGGCCCTGGACATTTCCGATGGCCTGCTCGCTGACTGCGGGCATATCGCCAAGGCCTCCGGCGTGGCGCTGGAGGTGAACCTGGCGCAGGTGCCAGTGTCTCCTGCCTTAGAGGCATTCCTCGGGCGCGAAGCGGCGTTGCAGGCAGCACTCACCGGTGGCGACGACTATGTACTGGCCTTCACCTTGCCGCCCGAAGCGCTGGC > NC_002947/605226‑605514 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |