| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 646,272 | T→A | 6.6% | intergenic (‑178/‑106) | PP_0556 ← / → acoR | acetoin catabolism protein/acetoin catabolism regulatory protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 646,272 | 0 | T | A | 6.6% | 218.7 / 4.0 | 75 | intergenic (‑178/‑106) | PP_0556/acoR | acetoin catabolism protein/acetoin catabolism regulatory protein |
| Reads supporting (aligned to +/- strand): ref base T (37/33); new base A (2/3); total (39/36) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.66e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.11e-01 | |||||||||||
CAGGAGCAAGCGGGGTGCCAGCTTTCTTCGCGATGGCTGAAGTGGCCGGGCTAGAGGGCTCTGGTCGTGTTCGGGCAGGTTTTCACGGGTAGGGTGGCGAGACGCCGGGTGCCAGCGCCGGGCCTGCGTTGCCGAGACACTGAGACGCTGCGTCTCAAGCCAGCCGG‑TAATCACACAGTGCTTGTCGGGGCATGCCCAGAGGCGCTTAATGGCCGGACAACGATAAAAACAGTAACGAGAACCGGAGGGCCTGAATGCTTGCCGCGAACTCCCGAGCCCATGTGGACTGCGTCAG > NC_002947/646124‑646418 | cAGGAGCAAGCGGGGTGCCAGCTTTCTTCGCGATGGCTGAAGTGGCCGGGCTAGAGGGCTCTGGTCGTGTTCGGGCAGGTTTTCACGGGTAGGGTGGCGAGACGCCGGGTGCCAGCGCCGGGCCTGCGTTGCCGAGACACTGAGACGCt < 1:8741/149‑1 (MQ=255) gAGCAAGCGGGGTGCCAGCTTTCTTCGCGATGGCTGAAGTGGCCGGGCTAGAGGGCTCTGGTCGTGTTCGGGCAGGTTTTCACGGGTAGGGTGGCGAGACGCCGGGTGCCAGCGCCGGGCCTGCGTTGCCGAGACACTGAGACGCTGCg > 4:197791/1‑149 (MQ=255) gCAAGCGGGGTGCCAGCTTTCTTCGCGATGGCTGAAGTGGCCGGGCTAGAGGGCTCTGGTCGTGTTCGGGCAGGTTTTCACGGGTAGGGTGGCGAGACGCCGGGTGCCAGCGCCGGGCCTGCGTTGCCGAGACACTGAGACGCTGCGtc > 5:259006/1‑149 (MQ=255) cAAGCGGGGTGCCAGCTTTCTTCGCGATGGCTGAAGTGGCCGGGCTAGAGGGCTCTGGTCGTGTTCGGGCAGGTTTTCACGGGTAGGGTGGCGAGACGCCGGGTGCCAGCGCCGGGCCTGCGTTGCCGAGACACTGAGACGCTGCGt < 3:260680/147‑1 (MQ=255) cAAGCGGGGTGCCAGCTTTCTTCGCGATGGCTGAAGTGGCCGGGCTAGAGGGCTCTGGTCGTGTTCGGGCAGGTTTTCACGGGTAGGGTGGCGAGACGCCGGGTGCCAGCGCCGGGCCTGCGTTGCCGAGACACTGAGACGCTGCGt > 4:260680/1‑147 (MQ=255) gCGGGGTGCCAGCTTTCTTCGCGATGGCTGAAGTGGCCGGGCTAGAGGGCTCTGGTCGTGTTCGGGCAGGTTTTCACGGGTAGGGTGGCGAGACGCCGGGTGCCAGCGCCGGGCCTGCGTTGCCGAGACACTGAGACGCTGc > 5:87854/1‑142 (MQ=255) gCGGGGTGCCAGCTTTCTTCGCGATGGCTGAAGTGGCCGGGCTAGAGGGCTCTGGTCGTGTTCGGGCAGGTTTTCACGGGTAGGGTGGCGAGACGCCGGGTGCCAGCGCCGGGCCTGCGTTGCCGAGACACTGAGACGCTGc < 6:87854/142‑1 (MQ=255) cGGGGTGCCAGCTTTCTTCGCGATGGCTGAAGTGGCCGGGCTAGAGGGCTCTGGTCGTGTTCGGGCAGGTTTTCACGGGTAGGGTGGCGAGACGCCGGGTGCCAGCGCCGGGCCTGCGTTGCCGAGACACTGAGACGCAGCGTCTCagt < 5:105037/149‑3 (MQ=255) tGCCAGCTTTCTTCGCGATGGCTGAAGTGGCCGGGCTAGAGGGCTCTGGTCGTGTTCGGGCAGGTTTTCACGGGTAGGGTGGCGAGACGCCGGGTGCCAGCGCCGGGCCTGCGTTGCCGAGACACTGAGACGCAGCGTCTCagtgtctc < 1:214090/149‑8 (MQ=255) ccAGCTTTCTTCGCGATGGCTGACGGGGCCGGGCTAGAGGGCTCTGGTCGTGTTCGGGCAGGTTTTCACGGGTAGGGTGGCGAGACGCCGGGTGCCAGCGCCGGGCCTGCGTTGCAGAGACACTGAGACGCTGCGTCTCAAGCCAGCCg < 8:193811/149‑1 (MQ=255) aGCTTTCTTCGCGATGGCTGAAGTGGCCGGGCTAGAGGGCTCTGGTCGTGTTCGGGCAGGTTTTCACGGGTAGGGTGGCGAGACGCCGGGTGCCAGCGCCGGGCCTGCGTTGCCGAGACACTGAGACGCTGCGTCTCAAGCCAGCCgg > 1:305422/1‑148 (MQ=255) cTTTCTTCGCGATGGCTGAAGTGGCCGGGCTAGAGGGCTCTGGTCGTGTTCGGGCAGGTTTTCACGGGTAGGGTGGCGAGACGCCGGGTGCCAGCGCCGGGCCTGCGTTGCCGAGACACTGAGACGCTGCGTCTCAAGCCAGCCGG‑Ta > 3:218256/1‑148 (MQ=255) cTTTCTTCGCGATGGCTGAAGTGGCCGGGCTAGAGGGCTCTGGTCGTGTTCGGGCAGGTTTTCACGGGTAGGGTGGCGAGACGCCGGGTGCCAGCGCCGGGCCTGCGTTGCCGAGACACTGAGACGCTGCGTCTCAAGCCAGCCGG‑Ta < 4:218256/148‑1 (MQ=255) cTTTCTTCGCGATGGCTGAAGTGGCCGGGCTAGAGCGCTCAGCTCGTGATCGGCCAGGTTTTCACGTGTAGGGTGCCGAGACGCCGGGTGCCAGCGCCGGGCCTGCGGTGCCGAGACACTGAGACGCTGCGTCTCAAGCCAGCCGG‑Taa < 8:138977/149‑1 (MQ=255) tcttcGCGATGGCTGAAGTGGCCGGGCTAGAGGGCTCTGGTCGTGTTCGGGCAGGTTTTCACGGGTAGGGTGGCGAGACGCCGGGTGCCAGCGCCGGGCCTGCGTTGCCGAGACACTGAGACGCTGCGTCTCAAGCCAGCCGG‑TAATc < 3:260899/148‑1 (MQ=255) cttcGCGATGGCTGAAGTGGCCGGGCTAGAGGGCTCTGGTCGTGTTCGGGCAGGTTTTCACGGGTAGGGTGGCGAGACGCCGGGTGCCAGCGCCGGGCCTGCGTTGCCGAGACACTGAGACGCTGCGTCTCAAGCCAGCCGG‑TAATca < 3:4601/148‑1 (MQ=255) ttcGCGATGGCTGAAGTGGCCGGGCTAGAGGGCTCTGGTCGTGTTCGGGCAGGTTTTCACGGGTAGGGTGGCGAGACGCCGGGTGCCAGCGCCGGGCCTGCGTTGCCGAGACACTGAGACGCTGCGTCTCAagcca < 4:97069/136‑1 (MQ=255) ttcGCGATGGCTGAAGTGGCCGGGCTAGAGGGCTCTGGTCGTGTTCGGGCAGGTTTTCACGGGTAGGGTGGCGAGACGCCGGGTGCCAGCGCCGGGCCTGCGTTGCCGAGACACTGAGACGCTGCGTCTCAagcca > 3:97069/1‑136 (MQ=255) cgcgATGGCTGAAGTGGCCGGGCTAGAGGGCTCTGGTCGTGTTCGGGCAGGTTTTCACGGGTAGGGTGGCGAGACGCCGGGTGCCAGCGCCGGGCCTGCGTTGCCGAGACACTGAGACGCTGCGTCTCAagcca > 1:219637/1‑134 (MQ=255) cgcgATGGCTGAAGTGGCCGGGCTAGAGGGCTCTGGTCGTGTTCGGGCAGGTTTTCACGGGTAGGGTGGCGAGACGCCGGGTGCCAGCGCCGGGCCTGCGTTGCCGAGACACTGAGACGCTGCGTCTCAagcca < 2:219637/134‑1 (MQ=255) gcgATGGCTGAAGTGGCCGGGCTAGAGGGCTCTGGTCGTGTTCGGGCAGGTTTTCACGGGTAGGGTGGCGAGACGCCGGGTGCCAGCGCCGGGCCTGCGTTGCCGAGACACTGAGACGCTGCGTCTCAAGCCAGCCGG‑TAATcacaca < 1:107931/148‑1 (MQ=255) gAAGTGGCCGGGCTAGAGGGCTCTGGTCGTGTTCGGGCAGGTTTTCACGGGTAGGGTGGCGAGACGCCGGGTGCCAGCGCCGGGCCTGCGTTGCCGAGACACTGAGACGCTGCGTCTCAAGCCAGCCGG‑TAATCACACAGTGCTTGTCg > 4:72599/1‑149 (MQ=255) gAAGTGGCCGGGCTAGAGGGCTCTGGTCGTGTTCGGGCAGGTTTTCACGGGTAGGGTGGCGAGACGCCGGGTGCCAGCGCCGGGCCTGCGTTGCCGAGACACTGAGACGCTGCGTCTCAAGCCAGCCGG‑TAATCACACAGTGCTTGTCg > 3:85866/1‑149 (MQ=255) aaGTGGCCTGGCTAGAGGGCTGTGGTCGTGTTCGGGCAGGTTTTCACGGGTAGGGTGGCGAGACGCCGGGTGCCAGCGCCGGGCCTGCGTTGCCGAGACACTGAGACGCTGCGTCTCAAGCCAGCCGG‑TAATCACACAGTGCTTGTCg < 5:9381/148‑1 (MQ=255) aaGTGGCCGGGCTAGAGGGCTCTGGTCGTGTTCGGGCAGGTTTTCACGGGTAGGGTGGCGAGACGCCGGGTGCCAGCGCCGGGCCTGCGTTGCCGAGACACTGAGACGCTGCGTCTCAAGCCAGCCGG‑TAATCACACAGTGCTTGTCgg < 3:197791/149‑1 (MQ=255) aaGTGGCCGGGCTAGAGGGCTCTGGTCGTGTTCGGGCAGGTTTTCACGGGTAGGGTGGCGAGACGCCGGGTGCCAGCGCCGGGCCTGCGTTGCCGAGACACTGAGACGCTGCGTCTCAAGCCAGCCGG‑TAATCACACAGTGCTTGTCg < 6:195862/148‑1 (MQ=255) gCCGGGCTAGAGGGCTCTGGTCGTGTTCGGGCAGGTTTTCACGGGTAGGGTGGCGAGACGCCGGGTGCCAGCGCCGGGCCTGCGTTGCCGAGACACTGAGACGCTGCGTCTCAag > 4:184189/1‑115 (MQ=255) gCCGGGCTAGAGGGCTCTGGTCGTGTTCGGGCAGGTTTTCACGGGTAGGGTGGCGAGACGCCGGGTGCCAGCGCCGGGCCTGCGTTGCCGAGACACTGAGACGCTGCGTCTCAag < 3:184189/115‑1 (MQ=255) agGGCTCTGGTCGTGTTCGGGCAGGTTTTCACGGGTAGGGTGGCGAGACGCCGGGTGCCAGCGCCGGGCCTGCGTTGCCGAGACACTGAGACGCTGCGTCTCAAGCCAGCCGG‑TAATCACACAGTGCTTGTCGGGGCATGCCCAGAGgc > 2:143026/1‑149 (MQ=255) agGGCTCTGGTCGTGTTCGGGCAGGTTTTCACGGGTAGGGTGGCGAGACGCCGGGTGCCAGCGCCGGGCCTGCGTTGCCGAGACACTGAGACGCTGCGTCTCAAGCCAGCCGG‑TAATCACACAGTGCTTGTCGGGGCATGCCCAGAGgc < 3:72599/149‑1 (MQ=255) tctGGTCGTGTTCGGGCAGGTTTTCACGGGTAGGGTGGCGAGACGCCGGGTGCCAGCGCCGGGCCTGCGTTGCCGAGACACTGAGACGCTGCGTCTCAAGCCAGCCGG‑TAATCACACAGTGCTTGTCGGGGCATGCCCAGAGGCGCtt > 5:117140/1‑148 (MQ=255) gTCGTGTTCGGGCAGGTTTTCACGGGTAGGGTGGCGAGACGCCGGGTGCCAGCGCCGGGCCTGCGTTGCCGAGACACTGAGACGCTGCGTCTCAAGCCAGCCGG‑TAATCACACAGTGCTTGTCGGGGCATGCCCAGAGGCGCTTAATgg > 1:78022/1‑149 (MQ=255) cGTGTTCGGGCAGGTTTTCACGGGTAGGGTGGCGAGACGCCGGGTGCCAGCGCCGGGCCTGCGTTGCCGAGACACTGAGACGCTGCGTCTCAAGCCAGCCGG‑TAATCACACAGTGCTTGTCGGGGCATGCCCAGAGGCGCTTAATGGcc < 1:143026/149‑1 (MQ=255) gtgtTCGGGCAGGTTTTCACGGGTAGGGTGGCGAGACGCCGGGTGCCAGCGCCGGGCCTGCGTTGCCGAGACACTGAGACGCTGCGTCTCAAGCCAGCCGG‑TAATCACACAGTGCTTGTCGGGGCATGc < 2:9725/129‑1 (MQ=255) gtgtTCGGGCAGGTTTTCACGGGTAGGGTGGCGAGACGCCGGGTGCCAGCGCCGGGCCTGCGTTGCCGAGACACTGAGACGCTGCGTCTCAAGCCAGCCGG‑TAATCACACAGTGCTTGTCGGGGCATGc > 1:9725/1‑129 (MQ=255) gtgtGCGGGCAGGTTTTCACGGGTAGGGTGGCGAGACGCCGGGTGCCAGCGCCGGGCCTGCGTTGCCGAGACACTGAGACGCTGCGTCTCAAGCCAGCCGG‑TAATCACACAGTGCTTGTCGGGGCATGCCCAGAGGCGCTTAATGGcc < 5:26672/148‑1 (MQ=255) gCAGGTTTTCACGGGTAGGGTGGCGAGACGCCGGGTGCCAGCGCCGGGCCTGCGTTGCCGAGACACTGAGCCGCTGCGTCTCAAGCCAGCCGG‑TAATCACACAGTGCTTGTCGGGGCATGCCCAGAGGCGCTTAATGGCCGGACAACGa > 3:252056/1‑149 (MQ=255) aGGTTTTCACGGGTAGGGTGGCGAGACGCCGGGTGCCAGCGCCGGGCCTGCGTTGCCGAGACACTGAGACGCTGCGTCTCAAGCCAGCCGG‑TAATCACACAGTGCTTGTCGGGGCATGCCCAGAGGCGCTTAATGGCCGGACAACGAt > 2:106495/1‑148 (MQ=255) gTTTTCACGGGTAGGGTGGCGAGACGCCGGGTGCCAGCGCCGGGCCTGCGTTGCCGAGACACTGAGACGCTGCGTCTCAAGCCAGCCGG‑TAATCACACAGTGCTTGTCGGGGCATGCCCAGAGGCGCTTAATGGCCGGACAACGATaa > 2:251657/1‑148 (MQ=255) gggTAGGGTGGCGAGACGCCGGGTGCCAGCGCCGGGCCTGCGTTGCCGAGACACTGAGACGCTGCGTCTCAAGCCAGCCGG‑TAATCACACAGTGCTTGTCGGGGCATGCCCAGAGGCGCTTAATGGCCGGACAACGATAAAAACAGTaa > 1:303790/1‑149 (MQ=255) tGGCGAGACGCCGGGTGCCAGCGCCGGGCCTGCGTTGCCGAGACACTGAGACGCTGCGTCTCAAGCCAGCCGG‑TAATCACACAGTGCTTGTCGGGGCATGCCCAGAGGCGCTTAATGGCCGGACAACGATAAAAACAGTAACGAGAAcc > 7:46630/1‑149 (MQ=255) cGAGACGCCGGGTGCCAGCGCCGGGCCTGCGTTGCCGAGACACTGAGACGCTGCGTCTCAAGCCAGCCGG‑TAATCACACAGTGCTTGTCGGGGCATGCCCAGAGGCGCTTAATGGCCGGACAACGATAAAAACAGTAAc > 5:68535/1‑139 (MQ=255) cGAGACGCCGGGTGCCAGCGCCGGGCCTGCGTTGCCGAGACACTGAGACGCTGCGTCTCAAGCCAGCCGG‑TAATCACACAGTGCTTGTCGGGGCATGCCCAGAGGCGCTTAATGGCCGGACAACGATAAAAACAGTAAc < 6:68535/139‑1 (MQ=255) gagaCGCCGGGTGCCAGCGCCGGGCCTGCGTTGCCGAGACACTGAGACGCTGCGTCTCAAGCCAGCCGG‑TAATCACACAGTGCTTGTCGGGGCATGCCCAGAGGCGCTTAATGGCCGGACAACGATAAAAACAGTACCGAGACCCGGAg > 8:135778/1‑149 (MQ=255) gagaCGCCGGGTGCCAGCGCCGGGCCTGCGTTGCCGAGACACTGAGACGCTGCGTCTCAAGCCAGCCGG‑TAATCACACAGTGCTTGTCGGGGCATGCCCAGAGGCGCTTAATGGCCGGACAACGATAAAAACAGTAACGAGAACCGGAg < 1:226270/149‑1 (MQ=255) gagaCGCCGGGTGCCAGCGCCGGGCCTGCGTTGCCGAGACACTGAGACGCTGCGTCTCAAGCCAGCCGG‑TAATCACACAGTGCTTGTCGGGGCATGCCCAGAGGCGCTTAATGGCCGGACAACGATAAAAACAGTAACGAGAACCGGAg > 2:226270/1‑149 (MQ=255) agaCGCCGGGTGCCAGCGCCGGGCCTGCGTTGCCGAGACACTGAGACGCTGCGTCTCAAGCCAGCCGG‑TAATCACACAGTGCTTGTCGGGGCATGCCCAGAGGCGCTTAATGGCCGGACAACGATAAAAACAGTAACGAGAACCGGAgg < 1:251657/149‑1 (MQ=255) gCCGGGTGCCAGCGCCGGGCCTGCGTTGCCGAGACACTGAGACGCTGCGTCTCAAGCCAGCCGG‑TAATCACACAGTGCTTGTCGGGGCATGCCCAGAGGCGCTTAATGGCCGGACAACGATAAAAACAGTAACGAGAACCGGAGGGCCt < 8:226835/149‑1 (MQ=255) gggTGCCAGCGCCGGGCCTGCGTTGCCGAGACACTGAGACGCTGCGTCTCAAGCCAGCCGG‑TAATCACACAGTGCTTGTCGGGGCATGCCCAGAGGCGCTTAATGGCCGGACAACGATAAAAACAGTAACGAGAACCGGAGGGCCTGaa > 8:159899/1‑149 (MQ=255) tGCCAGCGCCGGGCCTGCGTTGCCGAGACACTGAGACGCTGCGTCTCAAGCCAGCCGG‑TAATCACACAGTGCTTGTCGGGGCATGCCCAGAGGCGCTTAATGGCCGGACAACGATAAAAACAGTAACGAGAACCGGAGGGCCTGAATGc > 3:297665/1‑149 (MQ=255) ccAGCGCCGGGCCTGCGTTGCCGAGACACTGAGACGCTGCGTCTCAAGCCAGCCGG‑TAATCACACAGTGCTTGTCGGGGCATGCCCAGAGGCGCTTAATGGCCGGACAACGATAAAAACAGTAACGAGAACCGGAGGGCCTGAATGCtt < 2:78022/149‑1 (MQ=255) cAGCGCCGGGCCTGCGTTGCCGAGACACTGAGACGCTGCGTCTCAAGCCAGCCGG‑TAATCACACAGTGCTTGTCGGGGCATGCCCAGAGGCGCTTAATGGCCGGACAACGATAAAAACAGTAACGAGAACCGGAGGGCCTGAATGCTTg > 2:265881/1‑149 (MQ=255) aGCGCCGGGCCTGCGTTGCCGAGACACTGAGACGCTGCGTCTCAAGCCAGCCGG‑TAATCACACAGTGCTTGTCGGGGCATGCCCAGAGGCGCTTAATGGCCGGACAACGATAAAAACAGTAACGAGAACCGGAGGGCCTGAATGCTTGc < 3:145081/149‑1 (MQ=255) ggCCTGCGTTGCCGAGACACTGAGACGCTGCGTCTCAAGCCAGCCGG‑TAATCACACAGTGCTTGTCGGGGCATGCCCAGAGGCGCTTAATGGCCGGACAACGATAAAAACAGTAACGAGAACCGGAggg < 2:307085/129‑1 (MQ=255) ggCCTGCGTTGCCGAGACACTGAGACGCTGCGTCTCAAGCCAGCCGG‑TAATCACACAGTGCTTGTCGGGGCATGCCCAGAGGCGCTTAATGGCCGGACAACGATAAAAACAGTAACGAGAACCGGAggg > 1:307085/1‑129 (MQ=255) ccTGCGTTGCCGAGACACTGAGACGCTGCGTCTCAAGCCAGCCGG‑TAATCACACAGTGCTTGTCGGGGCATGCCCAGAGGCGCTTAATGGCCGGACAACGATAAAAACAGTAACGAGAACCGGAGGGCCTGAATGCTTGCCGCGAACTc > 4:131670/1‑149 (MQ=255) gCGTTGCCGAGACACTGAGACGCTGCGTCTCAAGCCAGCCGGATAATCACACAGTGCTTGTCGGGGCATGCCCAGAGGCGCTTAATGGCCGGACAACGATAAAAACAGTAACGAGAACCGGAGGGCCTGAATGCTTGCCGCGAACTccc > 1:61819/1‑149 (MQ=255) gCGTTGCCGAGACACTGAGACGCTGCGTCTCAAGCCAGCCGG‑TAATCACACAGTGCTTGTCGGGGCATGCCCAGAGGCGCTTAATGGCCGGACAACGATAAAAACAGTAACGAGAACCGGAGGGCCTGAATGCTTGCCGCGAACTccc > 1:45692/1‑148 (MQ=255) gcttGAGACGCAGCGTCTCAAGCCAGCCGG‑TAATCACACAGTGCTTGTCGGGGCATGCCCAGAGGCGCTTAATGGCCGGACAACGATAAAAACAGTAACGAGAACCGGAGGGCCTGAATGCt > 2:163209/4‑122 (MQ=255) gcttGAGACGCAGCGTCTCAAGCCAGCCGG‑TAATCACACAGTGCTTGTCGGGGCATGCCCAGAGGCGCTTAATGGCCGGACAACGATAAAAACAGTAACGAGAACCGGAGGGCCTGAATGCt < 1:163209/119‑1 (MQ=255) cttGAGACGCAGCGTCTCAAGCCAGCCGG‑TAATCACACAGTGCTTGTCGGGGCATGCCCAGAGGCGCTTAATGGCCGGACAACGATAAAAACAGTAACGAGAACCGGAGGGCCTGAATGCTTGCCGCGAACTCCCGAGCCCATGTGGAc > 3:214772/3‑149 (MQ=255) acTGAGACGCTGCGTCTCAAGCCAGCCGG‑TAATCACACAGTGCTTGTCGGGGCATGCCCAGAGGCGCTTAATGGCCGGACAACGATAAAAACAGTAACGAGAACCGGAGGGCCTGAATGCTTGCCGCGaa < 7:152587/130‑1 (MQ=255) acTGAGACGCTGCGTCTCAAGCCAGCCGG‑TAATCACACAGTGCTTGTCGGGGCATGCCCAGAGGCGCTTAATGGCCGGACAACGATAAAAACAGTAACGAGAACCGGAGGGCCTGAATGCTTGCCGCGaa > 8:152587/1‑130 (MQ=255) acTGAGACGCTGCGTCTCAAGCCAGCCGG‑TAATCACACAGTGCTTGTCGGGGCATGCCCAGAGGCGCTTAATGGCCGGACAACGATAAAAACAGTAACGAGAACCGGAGGGCCTGAATGCTTGCCGCGAACTccc < 2:191819/135‑1 (MQ=255) acTGAGACGCTGCGTCTCAAGCCAGCCGG‑TAATCACACAGTGCTTGTCGGGGCATGCCCAGAGGCGCTTAATGGCCGGACAACGATAAAAACAGTAACGAGAACCGGAGGGCCTGAATGCTTGCCGCGAACTccc > 1:191819/1‑135 (MQ=255) tGAGACGCTGCGTCTCAAGCCAGCCGG‑TAATCACACAGTGCTTGTCGGGGCATGCCCAGAGGCGCTTAATGGCCGGACAACGATAAAAACAGTAACGAGAACCGGAGGGCCTGAATGCTTGCCGCGAACTCCCGAGccc < 2:12633/139‑1 (MQ=255) tGAGACGCTGCGTCTCAAGCCAGCCGG‑TAATCACACAGTGCTTGTCGGGGCATGCCCAGAGGCGCTTAATGGCCGGACAACGATAAAAACAGTAACGAGAACCGGAGGGCCTGAATGCTTGCCGCGAACTCCCGAGccc > 1:12633/1‑139 (MQ=255) tGAGACGCTGCGTCTCAAGCCAGCCGG‑TAATCACACAGTGCTTGTCGGGGCATGCCCAGAGGCGCTTAATGGCCGGACAACGATAAAAACAGTAACGAGAACCGGAGGGCCTGAATGCTTGCCGCGAACTCCCGAGCCCATGTGGACTg > 5:104705/1‑149 (MQ=255) gagaCGCTGCGTCTCAAGCCAGCCGG‑TAATCACACAGTGCTTGTCGGGGCATGCCCAGAGGCGCTTAATGGCCGGACAACGATAAAAACAGTAACGAGAACCGGAGGGCCTGAATGCTTGCCGCGAACTCCCGAGCCCAtgt < 5:205446/142‑1 (MQ=255) gagaCGCTGCGTCTCAAGCCAGCCGG‑TAATCACACAGTGCTTGTCGGGGCATGCCCAGAGGCGCTTAATGGCCGGACAACGATAAAAACAGTAACGAGAACCGGAGGGCCTGAATGCTTGCCGCGAACTCCCGAGCCCAtgt > 6:205446/1‑142 (MQ=255) agaCGCTGCGTCTCAAGCCAGCCGT‑TAATCACACAGTGGTTGTCGGGGCATGCCCAGAGGCGGTTAATGGCCGGACAACGATAAAAACAGTAACGAGAACCGGAGGGCCTGAATGCTTGCCGCGAACTCCCGAGCCCATGTGGACTGc < 2:61819/148‑1 (MQ=255) agaCGCTGCGTCTCAAGCCAGCCGG‑TAATCACACAGTGCTTGTCGGGGCATGCCCAGAGGCGCTTAATGGCCGGACAACGATAAAAACAGTAACGAGAACCGGAGGGCCTGAATGCTTGCCGCGAACTCCCGAGCCCATGTGGACTGc < 2:45692/148‑1 (MQ=255) gaCGCTGCGTCTCAAGCCAGCCGG‑TAATCACACAGTGCTTGTCGGGGCGTGCCCAGAGGCGCTTAATGGCCGGACAACGATAAAAACAGTAACGAGAACCGGAGGGCCTGAATGCTTGCCGCGAACTCCCGAGCCCATGTGGACTGCg > 1:76941/1‑148 (MQ=255) gaCGCTGCGTCTCAAGCCAGCCGG‑TAATCACACAGTGCTTGTCGGGGCATGCCCAGAGGCGCTTAATGGCCGGACAACGATAAAAACAGTAACGAGAACCGGAGGGCCTGAATGCTTGCCGCGAACTCCCGAGCCCATGTGGACTGCGt < 3:131670/149‑1 (MQ=255) gaCGCTGCGTCTCAAGCCAGCCGG‑TAATCACACAGTGCTTGTCGGGGCATGCCCAGAGGCGCTTAATGGCCGGACAACGATAAAAACAGTAACGAGAACCGGAGGGCCTGAATGCTTGCCGCGAACTCCCGAGCCCATGTGGACTGCGt > 2:170105/1‑149 (MQ=255) aCGCTGCGTCTCAAGCCAGCCGG‑TAATCACACAGTGCTTGTCGGGGCATGCCCAGAGGCGCTTAATGGCCGGCCCACGATAAAAACAGTAACGAGAACCGGAGGGCCTGAATGCTTGCCGCGAACTCCCGAGCCCATGTGGACTGCGt < 1:265881/148‑1 (MQ=255) tGCGTCTCAAGCCAGCCGG‑TAATCACACAGTGCTTGTCGGGGCATGCCCAGAGGCGCTTAATGGCCGGACAACGATAAAAACAGTAACGAGAACCGGAGGGCCTGAATGCTTGCCGCGAACTCCCGAGCCCATGTGGACTGCGTcag > 3:286565/1‑147 (MQ=255) | CAGGAGCAAGCGGGGTGCCAGCTTTCTTCGCGATGGCTGAAGTGGCCGGGCTAGAGGGCTCTGGTCGTGTTCGGGCAGGTTTTCACGGGTAGGGTGGCGAGACGCCGGGTGCCAGCGCCGGGCCTGCGTTGCCGAGACACTGAGACGCTGCGTCTCAAGCCAGCCGG‑TAATCACACAGTGCTTGTCGGGGCATGCCCAGAGGCGCTTAATGGCCGGACAACGATAAAAACAGTAACGAGAACCGGAGGGCCTGAATGCTTGCCGCGAACTCCCGAGCCCATGTGGACTGCGTCAG > NC_002947/646124‑646418 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |