Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 787,412 T→A 7.3% L177Q (CTG→CAG)  ettA → ADP/ATP ratio sensor/translation inhibitor

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_002947787,4120TA 7.3% 239.9 / 7.7 82L177Q (CTG→CAG) ettAADP/ATP ratio sensor/translation inhibitor
Reads supporting (aligned to +/- strand):  ref base T (35/40);  new base A (4/2);  total (39/43)
Fisher's exact test for biased strand distribution p-value = 4.21e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.65e-01

TGGAAGCCATCCTGCAGGCCGCCGATGGCCACAACCTGGAGCGCCAGCTGGACGTCGCTGCCGACGCCCTGCGCCTGCCGGCCTGGGATGCGCGCATCGAACACCTGTCCGGTGGTGAGAAACGCCGTGTGGCCCTGTGCCGCCTGCTGCTGTCGGCACCCGACATGCTGCTGCTCGACGAACCGACCAACCACCTGGACGCCGACTCGGTGGCCTGGCTGGAGCGCTTCCTGCACGACTTCCCGGGCACCGTGGTAGCCATTACCCACGACCGTTACTTCCTCGACAACGTCGC  >  NC_002947/787265‑787559
                                                                                                                                                   |                                                                                                                                                   
tGGAAGCCATCCTGCAGGCCGCCGATGGCCACAACCTGGAGCGCCAGCTGGACGTCGCTGCCGACGCCCTGCGCCTGCCGGCCTGGGATGCGCGCATCGAACACCTGTCCGGTGGTGAGAAACGCCGTGTGGCCCTGTGCCGCctgctg                                                                                                                                                    >  3:190963/1‑149 (MQ=255)
tGGAAGCCATCCTGCAGGCCGCCGATGGCCACAACCTGGAGCGCCAGCTGGACGTCGCTGCCGACGCCCTGCGCCTGCCGGCCTGGGATGCGCGCATCGAACACCTGTCCGGTGGTGAGAAACGCCGTGTGGCCCTGTGCCGCctgctg                                                                                                                                                    >  6:127542/1‑149 (MQ=255)
  gAAGCCATCCTGCAGGCCGCCGATGGCCACAACCTGGAGCGCCAGCTGGACGTCGCTGCCGACGCCCTGCGCCTGCCGGCCTGGGATGCGCGCATCGAACACCTGTCCGGTGGTGAGAAACGCCGTGTGGCCCTGTGCCGCctgctgct                                                                                                                                                  >  2:232415/1‑149 (MQ=255)
     gCCATCCTGCAGGCCGCCGATGGCCACAACCTGGAGCGCCAGCTGGACGTCGCTGCCGACGCCCTGCGCCTGCCGGCCTGGGATGCGCGCATCGAACACCTGTCCGGTGGTGAGAAACGCCGTGTGGCCCTGTGCCGCCTGCTGCTGTc                                                                                                                                               <  6:152725/149‑1 (MQ=255)
      ccATCCTGCAGGCCGCCGATGGCCACAACCTGGAGCGCCAGCTGGACGTCGCTGCCGACGCCCTGCGCCTGCCGGCCTGGGATGCGCGCATCGAACACCTGTCCGGTGGTGAGAAACGCCGTGTGGCCCTGTGCCGCCTGCTGCTGTCg                                                                                                                                              <  8:158677/149‑1 (MQ=255)
          ccTGCAGGCCGCCGATGGCCACAACCTGGAGCGCCAGCTGGACGTCGCTGCCGACGCCCTGCGCCTGCCGGCCTGGGATGCGCGCATCGAACACCTGTCCGGTGGTGAGAAACGCCGTGTGGCCCTGTGCCGCCTGCTGCTGTCGGCAc                                                                                                                                          >  4:254746/1‑149 (MQ=255)
           cTGCAGGCCGCCGATGGCCACAACCTGGAGCGCCAGCTGGACGTCGCTGCCGACGCCCTGCGCCTGCCGGCCTGGGATGCGCGCATCGAACACCTGTCCGGTGGTGAGAAACGCCGTGTGGCCCTGTGCCGCCTGCTGCTGTCGGCAcc                                                                                                                                         >  1:298129/1‑149 (MQ=255)
           cTGCAGGCCGCCGATGGCCACAACCTGGAGCGCCAGCTGGACGTCGCTGCCGACGCCCTGCGCCTGCCGGCCTGGGATGCGCGCATCGAACACCTGTCCGGTGGTGAGAAACGCCGTGTGGCCCTGTGCCGCCTGCTGCTGTCGGCAcc                                                                                                                                         >  2:50011/1‑149 (MQ=255)
              cAGGCCGCCGTTGGCCACAACCTTGAGCGCCAGCTGGACGTCGCTGCCGACGGCTTGCGCCTGCCGGCCTGGGATGCGCGCATCGAACACCTGTCCGGTGGTGAGAAACGCCGTGTGGCCCTGTGCCGCCTGCTGCTGTCGGCACCCg                                                                                                                                       <  3:239094/148‑1 (MQ=255)
              cAGGCCGCCGATGGCCACAACCTGGAGCGCCAGCTGGACGTCGCTGCCGACGCCCTGCGCCTGCCGGCCTGGGATGCGCGCATCGAACACCTGTCCGGTGGTGAGAAACGCCGTGTGGCCCTGTGCCGCCTGCTGCTGTCGGCACCCg                                                                                                                                       <  2:287358/148‑1 (MQ=255)
              cAGGCCGCCGATGGCCACAACCTGGAGCGCCAGCTGGACGTCGCTGCCGACGCCCTGCGCCTGCCGGCCTGGGATGCGCGCATCGAACACCTGTCCGGTGGTGAGAAACGCCGTGTGGCCCTGTGCCGACAGCAGCAGGCGGCAcaggg                                                                                                                                      <  7:75019/149‑5 (MQ=255)
               aGGCCGCCGATGGCCACAACCTGGAGCGCCAGCTGGACGTCGCTGCCGACGCCCTGCGCCTGCCGGCCTGGGATGCGCGCATCGAACACCTGTCCGGTGGTGAGAAACGCCGTGTGGCCCTGTGCCGCCTGCTGCTGTCGGCACCCGAc                                                                                                                                     <  2:218414/149‑1 (MQ=255)
                   cgccgATGGCCACAACCTGGAGCGCCAGCTGGACGTCGCTGCCGACGCCCTGCGCCTGCCGGCCTGGGATGCGCGCATCGAACACCTGTCCGGTGGTGAGAAACGCCGTGTGGCCCTGTGCCGCCTGCTGCTGTCGGCACCCGACAtgc                                                                                                                                 <  6:55077/149‑1 (MQ=255)
                    gccgATGGCCACAACCTGGAGCGCCAGCTGGACGTCGCTGCCGACGCCCTGCGCCTGCCGGCCTGGGATGCGCGCATCGAACACCTGTCCGGTGGTGAGAAACGCCGTGTGGCCCTGTGCCGCCTGCTGCTGTCGGCACCCGACAtgct                                                                                                                                >  7:223803/1‑149 (MQ=255)
                     ccgATGGCCACAACCTGGAGCGCCAGCTGGACGTCGCTGCCGACGCCCTGCGCCTGCCGGCCTGGGATGCGCGCATCGAACACCTGTCCGGTGGTGAGAAACGCCGTGTGGCCCTGTGCCGCCTGCTGCTGTCGGCACCCGACAtgctg                                                                                                                               <  1:26963/149‑1 (MQ=255)
                     ccgATGGAAACAACCTGGAGCGCCAGCTGGACGTCGCTGCCGACGCCCTGCGCCTGCCGGCCTGGGATGCGCGCATCGAACACCTGTCCGGTGGTGAGAAACGCCGTGTGGCCCTGTGCCGCCTGCTGCTGTCGGCACCCGACAtgctg                                                                                                                               >  3:261338/1‑149 (MQ=255)
                       gATGGCCACAACCTGGAGCGCCAGCTGGACGTCGCTGCCGACGCCCTGCGCCTGCCGGCCTGGGATGCGCGCATCGAACACCTGTCCGGTGGTGAGAAACGCCGTGTGGCCCTGTGCCGCCTGCTGCTGTCGGGTGCCGACagcagcag                                                                                                                             <  2:224346/149‑8 (MQ=255)
                            ccACAACCTGGAGCGCCAGCTGGACGTCGCTGCCGACGCCCTGCGCCTGCCGGCCTGGGATGCGCGCATCGAACACCTGTCCGGTGGTGAGAAACGCCGTGTGGCCCTGTGCCGCCTGCTGCTGTCGGCACCCGACATGCTGCTGCTcg                                                                                                                        <  2:298129/149‑1 (MQ=255)
                            ccACAACCTGGAGCGCCAGCTGGACGTCGCTGCCGACGCCCTGCGCCTGCCGGCCTGGGATGCGCGCATCGAACACCTGTCCGGTGGTGAGAAACGCCGTGTGGCCCTGTGCCGCCTGCTGCTGTCGGCACCCGACATGCTGCTGCTc                                                                                                                         >  3:166253/1‑148 (MQ=255)
                               caACCTGGAGCGCCAGCTGGACGTCGCTGCCGACGCCCTGCGCCTGCCGGCCTGGGATGCGCGCATCGAACACCTGTCCGGTGGTGAGAAACGCCGTGTGGCCCTGTGCCGCCTGCTGCTGTCGGCACCCGACAtgctgc                                                                                                                              <  7:234940/140‑1 (MQ=255)
                               caACCTGGAGCGCCAGCTGGACGTCGCTGCCGACGCCCTGCGCCTGCCGGCCTGGGATGCGCGCATCGAACACCTGTCCGGTGGTGAGAAACGCCGTGTGGCCCTGTGCCGCCTGCTGCTGTCGGCACCCGACAtgctgc                                                                                                                              >  8:234940/1‑140 (MQ=255)
                                   cTGGAGCGCCAGCTGGACGTCGCTGCCGACGCCCTGCGCCTGCCGGCCTGGGATGCGCGCATCGAACACCTGTCCGGTGGTGAGAAACGCCGTGTGGCCCTGTGCCGCCTGCTGCTGTCGGCACCCGACATGCTGCTGCTCGACGAAcc                                                                                                                 >  3:246366/1‑149 (MQ=255)
                                      gAGCGCCAGCTGGACGTCGCTGCCGACGCCCTGCGCCTGCCGGCCTGGGATGCGCGCATCGAACACCTGTCCGGTGGTGAGAAACGCCGTGTGGCCCTGTGCCGCCTGCTGCTGTCGGCACCCGACATGCTGCTGCTCGACGAACCGac                                                                                                              <  8:223803/149‑1 (MQ=255)
                                           ccAGCTGGACGTCGCTGCCGACGCCCTGCGCCTGCCGGCCTGGGATGCGCGCATCGAACACCTGTCCGGTGGTGAGAAACGCCGTGTGGCCCTGTGCCGCCTGCTGCTGTCGGCACCCGACATGCTGCTGCTCGACGAACCGaccaac                                                                                                          >  2:98591/1‑148 (MQ=255)
                                              gCTGGACGTCGCTGCCGACGCCCTGCGCCTGCCGGCCTGGGATGCGCGCATCGAACACCTGTCCGGTGGTGAGAAACGCCGTGTGGCCCTGTGCCGCCTGCTGCTGTCGGCACCCGACATGCTGCTGCTCGACGAACCGACCAaccacc                                                                                                      >  3:37241/1‑149 (MQ=255)
                                               cTGGACGTCGCTGCCGACGCCCTGCGCCTGCCGGCCTGGGATGCGCGCATCGAACACCTGTCCGGTGGTGAGAAACGCCGTGTGGCCCTGTGCCGCCTGCTGCTGTCGGCACCCGACATGCTGCTGCTCGACGAACCGACCAACCACCt                                                                                                     >  7:60469/1‑149 (MQ=255)
                                                tGGACGTCGCTGCCGACGCCCTGCGCCTGCCGGCCTGGGATGCGCGCATCGAACACCTGTCCGGTGGTGAGAAACGCCGTGTGGCCCTGTGCCGCCTGCTGCTGTCGGCACCCGACATGCTGCTGCTCGACGAACCGac                                                                                                              <  6:78583/139‑1 (MQ=255)
                                                tGGACGTCGCTGCCGACGCCCTGCGCCTGCCGGCCTGGGATGCGCGCATCGAACACCTGTCCGGTGGTGAGAAACGCCGTGTGGCCCTGTGCCGCCTGCTGCTGTCGGCACCCGACATGCTGCTGCTCGACGAACCGac                                                                                                              >  5:78583/1‑139 (MQ=255)
                                                   aCGTCGCTGCCGACGCCCTGCGCCTGCCGGCCTGGGATGCGCGCATCGAACACCTGTCCGGTGGTGAGAAACGCCGTGTGGCCCTGTGCCGCCTGCTGCTGTCGGCACCCGACATGCTGCTGCTCGACGAACCGACCAACCACCTGGAc                                                                                                 >  3:54521/1‑149 (MQ=255)
                                                     gTCGCTGCCGACGCCCTGCGCCTGCCGGCCTGGGATGCGCGCATCGAACACCTGTCCGGTGGTGAGAAACGCCGTGTGGCCCTGTGCCGCCTGCTGCTGTCGGCACCCGACATGCTGCTGCTCGACGAACCGACCAACCACCTGGACGc                                                                                               >  7:219306/1‑149 (MQ=255)
                                                        gCTGCCGACGCCCTGCGCCTGCCGGCCTGGGATGCGCGCATCGAACACCTGTCCGGTGGTGAGAAACGCCGTGTGGCCCTGTGCCGCCTGCTGCTGTCGGCACCCGACATGCTGCTGCTCGACGAACCGACCAACCACCTGGACGCCGa                                                                                            <  5:127542/149‑1 (MQ=255)
                                                            ccGACGCCCTGCGCCTGCCGGCCTGGGATGCGCGCAGCGAACACCTGTCCGGTGGTGAGAAACGCCGTGTGGCCCTGTGCCGCCTGCTGCTGTCGGCACCCGACATGCTGCTGCTCGACGAACCGACCAACCACCTGGACGCCGACTc                                                                                         <  8:64051/148‑1 (MQ=255)
                                                             cGACGCCCTGCGCCTGCCGGCCTGGGATGCGCGCATCGAACACCTGTCCGGTGGTGAGAAACGCCGTGTGGCCCTGTGCCGCCTGCTGCTGTCGGCACCCGACATGCTGCTGCTCGACGACCCGACCAACCACCTGGACGCCGCCTCgg                                                                                       >  7:66727/1‑149 (MQ=255)
                                                              gACGCCCTGCGCCTGCCGGCCTGGGATGCGCGCATCGAACACCTGTCCGGTGGTGAGAAACGCCGTGTGGCCCTGTGCCGCCTGCTGCTGTCGGCACCCGACATGCTGCTGCTCGACGAACCGACCAACCACCTGGACGCCGACTCGGt                                                                                      >  3:170354/1‑149 (MQ=255)
                                                              gACGCCCTGCGCCTGCCGGCCTGGGATGCGCGCATCGAACACCTGTCCGGTGGTGAGAAACGCCGTGTGGCCCTGTGCCGCCTGCTGCTGTCGGCACCCGACATGCTGCTGCTCGACGAACCGACCAACCACCTGGACGCCGACTCGGt                                                                                      <  3:254746/149‑1 (MQ=255)
                                                               aCGCCCTGCGCCTGCCGGCCTGGGATGCGCGCATCGAACACCTGTCCGGTGGTGAGAAACGCCGTGTGGCCCTGTGCCGCCTGCTGCTGTCGGCACCCGACATGCTGCTGCTCGACGAACCGACCAACCACCTGGACGCCGACTCGGTg                                                                                     <  4:190963/149‑1 (MQ=255)
                                                               aCGCCCTGCGCCTGCCGGCCTGGGATGCGCGCATCGAACACCTGTCCGGTGGTGAGAAACGCCGTGTGGCCCTGTGCCGCCTGCTGCTGTCGGCACCCGACATGCTGCTGCTCGACGAACCGACCAACCACCTGGACGCCGACTCGGTg                                                                                     <  4:246366/149‑1 (MQ=255)
                                                                   ccTGCGCCTGCCGGCCTGGGATGCGCGCATCGAACACCTGTCCGGTGGTGAGAAACGCCGTGTGGCCCTGTGCCGCCTGCTGCTGTCGGCACCCGACATGCTGCTGCTCGACGAACCGACCAACCACCTGGCCACCGAGTCggcgtc                                                                                   >  6:141867/1‑143 (MQ=255)
                                                                   ccTGCGCCTGCCGGCCTGGGATGCGCGCATCGAACACCTGTCCGGTGGTGAGAAACGCCGTGTGGCCCTGTGCCGCCTGCTGCTGTCGGCACCCGACATGCTGCTGCTCGACGAACCGACCAACCACCTGGACGCCGACTCGGTGGCct                                                                                 >  3:160960/1‑149 (MQ=255)
                                                                   ccTGCGCCTGCCGGCCTGGGATGCGCGCATCGAACACCTGTCCGGTGGTGAGAAACGCCGTGTGGCCCTGTGCCGCCTGCTGCTGTCGGCACCCGACATGCTGCTGCTCGACGAACCGACCAACCACCTGGAAGCCGACTCGGTGGCct                                                                                 >  5:310997/1‑149 (MQ=255)
                                                                       cgcCTGCCGGCCTGGGATGCGCGCATCGAACACCTGTCCGGTGGTGAGAAACGCCGTGTGGCCCTGTGCCGCCTGCTGCTGTCGGCACCCGACATGCTGCTGCTCGACGAACCGACCAACCACCTGGACGCCGACTCGGTGGCctgg                                                                               <  1:4066/147‑1 (MQ=255)
                                                                        gcCTGCCGGCCTGGGATGCGCGCATCGAACACCTGTCCGGTGGTGAGAAACGCCGTGTGGCCCTGTGCCGCCTGCTGCTGTCGGCACCCGACATGCTGCTGCTCGACGAACCGACCAACCCCCTGGACGCCGACTCGGTGGCctggctg                                                                            >  8:180834/1‑149 (MQ=255)
                                                                           tGCCGGCCTGGGATGCGCGCATCGAACACCTGTCCGGTGGTGAGAAACGCCGTGTGGCCCTGTGCCGCCTGCTGCTGTCGGCACCCGACATGCTGCTGCTCGACGAACCGACCAACCACCTGGACGCCGACTCGGTGGCCTGGCTGGAg                                                                         >  5:83272/1‑149 (MQ=255)
                                                                             ccGGCCTGGGATGCGCGCATCGAACACCTGTCCGGTGGTGAGAAACGCCGTGTGGCCCTGTGCCGCCTGCTGCTGTCGGCACCCGACATGCTGCTGCTCGACGAACCGACCAACCACCTGGACGCCGACTCGGTGGCCTGGCTGGa                                                                          >  6:78693/1‑146 (MQ=255)
                                                                             ccGGCCTGGGATGCGCGCATCGAACACCTGTCCGGTGGTGAGAAACGCCGTGTGGCCCTGTGCCGCCTGCTGCTGTCGGCACCCGACATGCTGCTGCTCGACGAACCGACCAACCACCTGGACGCCGACTCGGTGGCCTGGCTGGa                                                                          <  5:78693/146‑1 (MQ=255)
                                                                             ccGGCCTGGGATGCGCGCATCGAACACCTGTCCGGTGGTGAGAAACGCCGTGTGGCCCTGTGCCGCCTGCTGCTGTCGGCACCCGACATGCTGCTGCTCGACGAACCGACCAACCACCTGGACGCCGACTCGGTGGCCTGGCTGGAgc                                                                        <  8:60469/148‑1 (MQ=255)
                                                                             ccGGCCTGGGATGCGCGCATCGAACACCTGTCCGGTGGTGAGAAACGCCGTGTGGCCCTGTGCCGCCTGCTGCTGTCGGCACCCGACATGCTGCTGCTCGACGAACCGACCAACCACCTGGACGCCGACTCGGTGGCCTGGCTGGAg                                                                         <  1:232415/147‑1 (MQ=255)
                                                                               ggCCGGGGATCCGCGCACCGACCCCCTGGCCGGGGGGGATAACCGCCGGGTGGCCCTGTGCCGCCTGCGGCTGGCGGCACCCTCCATGGGGGGGTTCGACGAACCGACCAACCACCTGGACGCCGACTCGGTGGCCTGGCTGGAGCGCt                                                                     <  1:249121/149‑1 (MQ=255)
                                                                                 ccTGGGATGCGCGCATCGAACACCTGTCCGGTGGTGAGAAACGCCGTGTGGCCCTGTGCCGCCTGCTGCTGTCGGCACCCGACATGCTCCTGCTCGACGAACCGACCAACCACCTGGACGCCGACTCGGTGGCCTGGCTGGAGCGCTTc                                                                   >  4:154188/1‑149 (MQ=255)
                                                                                     ggATGCGCGCATCGAACACCTGTCCGGTGGTGAGAAACGCCGTGTGGCCCTGTGCCGCCTGCTGCTGTCGGCACCCGACATGCTGCTGCTCGACGAACCGACCAACCACCTGGACGCCGACTCGGTGGCCTGGCTGGAGCGCTTCCTGc                                                               <  4:37241/149‑1 (MQ=255)
                                                                                      gATGCGCGCATCGAACACCTGTCCGGTGGTGAGAAACGCCGTGTGGCCCTGTGCCGCCTGCTGCTGTCGGCACCCGACATGCTGCTGCTCGACGAACCGACCAACCACCTGGACGCCGACTCGGTGGCCTGGCTGGAGCGCTTCCTGCa                                                              <  4:160960/149‑1 (MQ=255)
                                                                                         gcgcgcATCGAACACCTGTCCGGTGGTGAGAAACGCCGTGTGGCCCTGTGCCGCCTGCTGCTGTCGGCACCCGACATGCTGCTGCTCGACGAACCGACCAACCACCTGGACGCCGACTCGGTGGCCTGGCTGGAGCGCtt                                                                    <  5:243317/140‑1 (MQ=255)
                                                                                         gcgcgcATCGAACACCTGTCCGGTGGTGAGAAACGCCGTGTGGCCCTGTGCCGCCTGCTGCTGTCGGCACCCGACATGCTGCTGCTCGACGAACCGACCAACCACCTGGACGCCGACTCGGTGGCCTGGCTGGAGCGCtt                                                                    >  6:243317/1‑140 (MQ=255)
                                                                                          cgcgcATCGAACACCTGTCCGGTGGTGAGAAACGCCGTGTGGCCCTGTGCCGCCTGCTGCTGTCGGCACCCGACATGCTGCTGCTCGACGAACCGACCAACCACCTGGACGCCGACTCGGTGGCCTGGCTGGAGCGCTTCCTGCACGa                                                           <  3:267730/148‑1 (MQ=255)
                                                                                           gcgcATCGAACACCTGTCCGGTGGTGAGAAACGCCGTGTGGCCCTGTGCCGCATGCTGCTGTCGGCACCCGACATGCTGCTGCTCGACGAACCGACCAACCACCTGGACGCCGACTCGGTGGCCTGCCTGGAGCGCTTCCTGCACGACt                                                         >  1:250517/1‑149 (MQ=255)
                                                                                                tCGAACACCTGTCCGGTGGTGAGAAACGCCGTGTGGCCCTGTGCCGCCTGCTGCTGTCGGCACCCGACATGCTGCTGCTCGACGAACCGACCAACCACCTGGACGCCGACTCGGTGGCCTGGCTGGAGTGCTTCCTGCACGACTTCCCg                                                    <  4:166253/149‑1 (MQ=255)
                                                                                                   aaCACCTGTCCGGTGGTGAGAAACGCCGTGTGGCCCTGTGCCGCCTGCTGCTGTCGGCACCCGACATGCTGCTGCTCGACGAACCGACCAACCACCTGGACGCCGACTCGGTGGCCTGGCTGGAGCGCTTCCTGCACGACTTCCCggg                                                  <  5:185133/148‑1 (MQ=255)
                                                                                                   aaCACCTGTCCGGTGGTGAGAAACGCCGTGTGGCCCTGTGCCGCCTGCTGCTGTCGGCACCCGACATGCTGCTGCTCGACGAACCGACCAACCACCTGGACGCCGACTCGGTGGCCTGGCTGGAGCGCTTCCTGCACGACTTCCCggg                                                  >  6:185133/1‑148 (MQ=255)
                                                                                                   aaCACCTGTCCGGTGGTGAGAAACGCCGTGTGGCCCTGTGCCGCCTGCTGCTGTCGGCACCCGACATGCTGCTGCTCGACAAACCGACCAACCACCTGGACGCCGACTCGGTGGCCTGGCTGGAGCGCTTCCTGCACGACTTCCCggg                                                  >  1:219582/1‑148 (MQ=255)
                                                                                                    acacCTGTCCGGTGGTGAGAAACGCCGTGTGGCCCTGTGCCGCCTGCTGCTGTCGGCACCCGACATGCTGCTGCTCGACGAACCGACCAACCACCTGGACGCCGACTCGGTGGCCTGGCTGGAGCGCTTCCTGCACGACTTCCCGGGCa                                                <  6:83272/149‑1 (MQ=255)
                                                                                                          gTCCGGTGGTGAGAAACGCCGTGTGGCCCTGTGCCGCCTGCTGCTGTCGGCACCCGACATGCTGCTGCTCGACGAACCGACCAACCACCTGGACGCCGACTCGGTGGCCTGGCTGGAGCGCTTCCTGCACGACTTCCCGGGCACCg                                             <  7:182334/146‑1 (MQ=255)
                                                                                                          gTCCGGTGGTGAGAAACGCCGTGTGGCCCTGTGCCGCCTGCTGCTGTCGGCACCCGACATGCTGCTGCTCGACGAACCGACCAACCACCTGGACGCCGACTCGGTGGCCTGGCTGGAGCGCTTCCTGCACGACTTCCCGGGCACCg                                             >  8:182334/1‑146 (MQ=255)
                                                                                                            ccgggcgtgCGAATCGCCGTGTGGCCCTGGGCCGCCTGCTGCTGGCGGCAGCCGACATGCGGGGGCTCGCCGAACCGACCCACCACCTGGTCGCCGACTCGGTGGCCTGGCTGGAGCGCTTCCTGCACGACTTCCCGGGCACCGTGGTa                                        <  3:219996/143‑1 (MQ=255)
                                                                                                             cGGTGGTGAGAAACGCCGTGTGGCCCTGTGCCGCCTGCTGCTGTCGGCACCCGACATGCTGCTGCTCGACGAACCGACCAACCACCTGGACGCCGACTCGGTGGCCTGGCTGGAGCGCTTCCTGCACGACTTCCCGGGCACCGTGGTa                                        <  5:100179/148‑1 (MQ=255)
                                                                                                                   tgAGAAACGCCGTGTGGCCCTGTGCCGCCTGCTGCTGTCGGCACCCGACATGCTGCTGCTCGACGAACCGACCAACCACCTGGACGCCGACTCGGTGGCCTGGCTGGAGCGCTTCCTGCACGACTTCCCGGGCACCGTGGTAGCCATTa                                 <  1:98591/149‑1 (MQ=255)
                                                                                                                     agaAACGCCGTGTGGCCCTGTGCCGCCTGCTGCTGTCGGCACCCGACATGCTGCTGCTCGACGAACCGACCAACCACCTGGACGCCGACTCGGTGGCCTGGCTGGAGCGCTTCCTGCCCGACTTCCCGGGCACCGTGGTa                                        >  7:54406/1‑140 (MQ=255)
                                                                                                                     agaAACGCCGTGTGGCCCTGTGCCGCCTGCTGCTGTCGGCACCCGACATGCTGCTGCTCGACGAACCGACCAACCACCTGGACGCCGACTCGGTGGCCTGGCTGGAGCGCTTCCTGCACGACTTCCCGGGCACCGTGGTa                                        <  8:54406/140‑1 (MQ=255)
                                                                                                                      gaAACGCCGTGTGGCCCTGTGCCGCCTGCTGCTGTCGGCACCCGACATGCTGCTGCTCGACGAACCGACCAACCACCTGGACGCCGACTCGGTGGCCTGGCTGGAGCGCTTCCTGCACGACTTCCCGGGCACCGTGGTAGCCATTAccc                              <  4:54521/149‑1 (MQ=255)
                                                                                                                        aaCGCCGTGTGGCCCTGTGCCGCCTGCTGCTGTCGGCACCCGACATGCTGCTGCTCGACGAACCGACCAACCACCTGGACGCCGACTCGGTGGCCTGGCTGGAGCGCTTCCTGCACGACTTCCCGGGCACCGTGGTAGCCATTACCCAc                            <  8:219306/149‑1 (MQ=255)
                                                                                                                        aaCGCCGTGTGGCCCTGTGCCGCCTGCTGCTGTCGGCACCCGACATGCTGCTGCTCGACGAACCGACCAACCACCTGGACGCCGACTCGGTGGCCTGGCTGGAGCGCTTCCTGCACGACTTCCCGGGCACCGTGGTAGCCATTACCCAc                            >  3:62053/1‑149 (MQ=255)
                                                                                                                               tgtgGCCCTGTGCCGCCTGCTGCTGTCGGCACCCGACATGCTGCTGCTCGACGAACCGACCAACCACCTGGACGCCGACTCGGTGGCCTGGCTGGAGCGCTTCCTGCACGACTTCCCGGGCACCGTGGTAGCCATTACCCACGACCGtt                     <  4:258943/149‑1 (MQ=255)
                                                                                                                                      cTGTGCCGCCTGCTGCTGTCGGCACCCGACATGCTGCTGCTCGACGAACCGACCAACCACCTGGACGCCGACTCGGTGGCCTGGCTGGAGCGCTTCCTGCACGACTTCCCGGGCACCGTGGTAGCCATTACCCACGACCGTTACTTCCt              >  2:47812/1‑149 (MQ=255)
                                                                                                                                      cTGTGCCGCCTGCTGCTGTCGGCACCCGACATGCTGCTGCTCGACGAACCGACCAACCACCTGGACGCCGACTCGGTGGCCTGGCTGGAGCGCTTCCTGCACGACTTCCCGGGCACCGTGGTAGCCATTACCCACGACCGTTACTTCCt              <  8:66727/149‑1 (MQ=255)
                                                                                                                                       tgttCCGCCTGCTGCTGTCGGCACCCGACATGCTGCTGCTCGACGAACCGACCAACCACCTGGACGCCGACTCGGTGGCCTGGCTGGAGCGCTTCCTGCACGACTTCCCGGGCACCGTGGTAGCCATTACCCACGACCGTTACTTCCTc             <  2:250517/149‑1 (MQ=255)
                                                                                                                                       ggtgCCGACAGCAGCAGGCGGCACCCGACATGCTGCTGCTCGACGAACCGACCAACCACCTGGACGCCGACTCGGTGGCCTGGCTGGAGCGCTTCCTGCACGACTTCCCGGGCACCGTGGTAGCCATTACCCACGAc                         >  8:69650/2‑137 (MQ=39)
                                                                                                                                       ggtgCCGACAGCAGCAGGCGGCACCCGACATGCTGCTGCTCGACGAACCGACCAACCACCTGGACGCCGACTCGGTGGCCTGGCTGGAGCGCTTCCTGCACGACTTCCCGGGCACCGTGGTAGCCATTACCCACGAc                         <  7:69650/136‑1 (MQ=39)
                                                                                                                                        gtgCCGACAGCAGCAGGCGGCACCCGACATGCTGCTGCTCGACGAACCGACCAACCACCTGGACGCCGACTCGGTGGCCTGGCTGGAGCGCTTCCTGCACGACTTCCCGGGCACCGTGGTAGCCATTACCCACGACCGTTACTTCCTc             >  8:232763/1‑148 (MQ=39)
                                                                                                                                        gtgCCGACAGCAGCAGGCGGCACCCGACATGCTGCTGCTCGACGAACCGACCAACCACCTGGACGCCGACTCGGTGGCCTGGCTGGAGCGCTTCCTGCACGACTTCCCGGGCACCGTGGTAGCCATTACCCACGACCGTTACTTCCTc             >  2:152251/1‑148 (MQ=39)
                                                                                                                                         tgCCGCCTGCTGCTGTCGGCACCCGACATGCTGCTGCTCGACGAACCGACCAACCACCTGGACGCCGACTCGGTGGCCTGGCTGGAGCGCTTCCTGCACGACTTCCCGGGCACCGTGGTAGCCATTACCCACGACCGTTACTTCCTc             <  1:50011/147‑1 (MQ=255)
                                                                                                                                         tgCCGACAGCAGCAGGCGGCACCCGCCATGCTGCTGCTCGACGCCCCGCCCAACCACCTGGCCGCCGACTCGGTGGCCTGGCTGGAGCGCTTCCTGCACGACTTCCCGGGCCCCGTGGTAGCCATTACCCACGCCCGTTACTTCCTCGa           >  7:103234/1‑149 (MQ=255)
                                                                                                                                           ccgccTGCTGCTGTCGGCACCCGACATGCTGCTGCTCGACGAACCGACCAACCACCTGGACGCCGACTCGGTGGCCTGGCTGGAGCGCTTCCTGCACGACTTCCCGGGCACCGTGGTAGCCATTACCCACGACCGTTACTTCCTCGAc          >  6:27934/1‑148 (MQ=255)
                                                                                                                                           ccgccTGCTGCTGTCGGCACCCGACATGCTGCTGCTCGACGAACCGACCAACCACCTGGACGCCGACTCGGTGGCCTGGCTGGAGCGCTTCCTGCACGACTTCCCGGGCACCGTGGTAGCCATTACCCACGACCGTTACTTCCTCGAc          >  6:23303/1‑148 (MQ=255)
                                                                                                                                            cgccTGCTGCTGTCGGCACCCGACATGCTGCTGCTCGACGAACCGACCAACCACCTGGACGCCGACTCGGTGGCCTGGCTGGAGCGCTTCCTGCACGACTTCCCGGGCACCGTGGTa                                        <  4:187303/117‑1 (MQ=255)
                                                                                                                                            cgccTGCTGCTGTCGGCACCCGACATGCTGCTGCTCGACGAACCGACCAACCACCTGGACGCCGACTCGGTGGCCTGGCTGGAGCGCTTCCTGCACGACTTCCCGGGCACCGTGGTa                                        >  3:187303/1‑117 (MQ=255)
                                                                                                                                             gccTGCTGCTGTCGGCACCCGACATGCTGCTGCTCGACGAACCGACCAACCACCTGGACGCCGACTCGGTGGCCTGGCTGGAGCGCTTCCTGCACGACTTCCCGGGCACCGTGGTAGCCATTACCCACGACCGTTACTTCCTCGACAAc       >  5:5466/1‑149 (MQ=255)
                                                                                                                                                tgctgctgTCGGCACCCGACATGCTGCTGCTCGACGAACCGACCAACCACCTGGACGCCGACTCGGTGGCCTGGCTGGAGCGCTTCCTGCACGACTTCCCGGGCACCGTGGTAGCCATTACCCACGACCGTTACTTCCTCGACAACGTc    >  8:189374/1‑149 (MQ=255)
                                                                                                                                                  ctgctgTCGGCACCCGACATGCTGCTGCTCGACGAACCGACCAACCACCTGGACGCCGACTCGGTGGCCTGGCTGGAGCGCTTCCTGCACGACTTCCCGGGCACCGTGGTAGCCATTACCCACGACCGTTACTTCCTCGACAACGTCGc  <  4:62053/149‑1 (MQ=255)
                                                                                                                                                   |                                                                                                                                                   
TGGAAGCCATCCTGCAGGCCGCCGATGGCCACAACCTGGAGCGCCAGCTGGACGTCGCTGCCGACGCCCTGCGCCTGCCGGCCTGGGATGCGCGCATCGAACACCTGTCCGGTGGTGAGAAACGCCGTGTGGCCCTGTGCCGCCTGCTGCTGTCGGCACCCGACATGCTGCTGCTCGACGAACCGACCAACCACCTGGACGCCGACTCGGTGGCCTGGCTGGAGCGCTTCCTGCACGACTTCCCGGGCACCGTGGTAGCCATTACCCACGACCGTTACTTCCTCGACAACGTCGC  >  NC_002947/787265‑787559

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: