| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,284,032 | T→A | 5.5% | intergenic (‑129/‑31) | PP_1120 ← / → PP_1121 | hypothetical protein/OmpA family protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,284,032 | 0 | T | A | 5.5% | 225.4 / 2.4 | 72 | intergenic (‑129/‑31) | PP_1120/PP_1121 | hypothetical protein/OmpA family protein |
| Reads supporting (aligned to +/- strand): ref base T (36/32); new base A (2/2); total (38/34) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.26e-01 | |||||||||||
TGGAGAAACCTTCGGTCATTGCCATTCCTCGTTCAAGTCATCCAAGACTAGCGGGCTGCGGCGTGCGGGCAAAGAGGCATGTGACCGTGTCGTAGCTTATTGCTGGCAGGGTTGGAATGCGCGGTCTTTACTCCCAGAGATCGGCCTTATGCCGATTCCCCCTAGGAGAAGCAATGAAATGAGCATAGTACGCACAGCGTTACCCCTGGTACTGCTCACCAGTGTGTTGACTGGTTGTGCAGGTTTGCAAAAAACCGACTGGCCGAAATGTGCCGCCGTCGGGGGTGTAGGCGG > NC_002947/1283885‑1284178 | tGGAGAAACCTTCGGTCATTGCCATTCCTCGTTCAAGTCATCCAAGACTAGCGGGCTGCGGCGTGCGGGCAAAGAGGCATGTGACCGTGTCGTAGCTTATTGCTGGCAGGGTTGGAATGCGCGGTCTTTACTCCCAGAGATCGGCCtt < 1:121450/148‑1 (MQ=255) gagaAACCTTCGGTCATTGCCATTCCTCGTTCAAGTCATCCAAGACTAGCGGGCTGCGGCGTGCGGGCAAAGAGGCATGTGACCGTGTCGTAGCTTATTGCTGGCAGGGCTGGAATGCGCGGTCTTTACTCCCAGAGATCGGCCTTATg < 7:125701/149‑1 (MQ=255) agaAACCTTAGGTCATTGCCATTCCTCGTTCAAGTCATCCAACACTAGCGGCCTGCGGCGTGCAGGCAAAGAGTCATGTGACCGAGTCGTACCTTATAGGAGGCAGGGTTGGAATGAGCGGTCTTTACTCCCAGAGATAGGCATAATGc > 2:95662/1‑149 (MQ=255) aaaCCTTCGGTCATTGCCATTCCTCGTTCAAGTCATCCAAGACTAGCGGGCTGCGGCGTGCGGGCAAAGAGGCATGTGACCGTGTCGTAGCTTATTGCTGGCAGGGTTGGAATGCGCGGTCTTTACTCCCAGAGATCGGCCTTATGcc > 8:119126/1‑148 (MQ=255) cGGTCATTGCCATTCCTCGTTCAAGTCATCCAAGACTAGCGGGCTGCGGCGTGCGGGCAAAGAGGCATGTGACCGTGTCGTAGCTTATTGCTGGCAGGGTTGGAATGCGCGGTCTTTACTCCCAGAGATCGGCCTTATGCCGATTcccc > 6:179696/1‑149 (MQ=255) cGGTCATTGCCATTCCTCGTTCAAGTCATCCAAGACTAGCGGGCTGCGGCGTGCGGGCAAAGAGGCATGTGACCGTGTCGTAGCTTATTGCTGGCAGGGTTGGAATGCGCGGTCTTTACTCCCAGAGATCGGCCTTATGCCGATTccc < 3:47162/148‑1 (MQ=255) cGGTCATTGCCATTCCTCGTTCAAGTCATCCAAGACTAGCGGGCTGCGGCGTGCGGGCAAAGAGGCATGTGACCGTGTCGTAGCTTATTGCTGGCAGGGTTGGAATGCGCGGTCTTTACTCCCAGAGATCGGCCTTATGCCGATTccc < 2:166096/148‑1 (MQ=255) cGGTCATTGCCATTCCTCGTTCAAGTCATCCAAGACTAGCGGGCTGCGGCGTGCGGGCAAAGAGGCATGTGACCGTGTCGTAGCTTATTGCTGGCAGGGTTGGAATGCGCGGTCTTTACTCCCAGAGATCGGCCTTATGCCGATTcc < 4:315142/147‑1 (MQ=255) cGGTCATTGCCATTCCTCGTTCAAGTCATCCAAGACAAGCGGCCTTCGGCGTGCGGGCAAAGAGGAATGTGACCGTGTCGTAGCTTATTGCTGGCAGGGTTGGAATCCGCTGGCTTTACTCCCAGAGATCGGCATAAGGCCGAtctct < 1:95662/148‑5 (MQ=255) ggTCATTGCCATTCCTCGTTCAAGTCATCCAAGACTAGCGGGCTGCGGCGTGCGGGCAAAGAGGCATGTGACCGTGTCGTAGCTTATTGCTGGCAGGGTTGGAATGCGCGGTCTTTACTCCCAGAGATCGGCATAAGGCCGAtctctg < 7:251340/148‑6 (MQ=255) aTTGCCATTCCTCGTTCAAGTCATCCAAGACTAGCGGGCTGCGGCGTGCGGGCAAAGAGGCATGTGACCGTGTCGTAGCTTATTGCTGGCAGGGTTGGAATGCGCGGTCTTTACTCCCAGAGATCGGCCTTATGCCGATTCCCCCTAg < 2:211341/148‑1 (MQ=255) cATTCCTCGTTCAAGTCATCCAAGACTAGCGGGCTGCGGCGTGCGGGCAAAGAGGCATGTGACCGTTTCGTAGCTTATTGCTGGCAGGGTTGGAATGCGCGGTCTTTACTCCCAGAGATCGGCCTTATGCCGATTCCCCCTAGGAGAAg < 7:61729/149‑1 (MQ=255) cTCGTTCAAGTCCTCCAAGACTAGCGGGCTGCGGCGTGCGGGCAAAGAGGCATGTGACCGTGTCGTAGCTTATTGCTGGCAGGGTTGGAATGCGCGGTCGTTACTCCCAGAGATCGGCCTTATGCCGATTCCCCCTAGGAGAAGCaatg < 2:309064/149‑1 (MQ=255) cTCGTTCAAGTCATCCAAGACTAGCTGGCTGCGGCTTGCGTTCAAAGAGCCATGTGACCGTGTCGTAGCTTATTGCGGGCAGGGTTGGAATCCGCGGTCTTTACTCCCAGAGATCGGCCTTATGCCGATTCCCCCTAGGAGAAGCaat < 8:209281/148‑1 (MQ=255) cTCGTTCAAGTCATCCAAGACTAGCGGGCTGCGGCGTGCGGGCAAAGAGGCATGTGACCGTGTCGTAGCTTATTGCTGGCAGGGTTGGAATGCGCGGTCTTTACTCCCAGAGATCGGCCTTATGCCGATTCCCCCTAGGAGAAGCaat < 5:179696/148‑1 (MQ=255) cTCGTTCAAGTCATCCAAGACTAGCGGGCTGCGGCGTGCGGGCAAAGAGGCATGTGACCGTGTCGTAGCTTATTGCTGGCAGGGTTGGAATGCGCGGTCTTTACTCCCAGAGATCGGCCTTATGCCGATTCCCCCTAGGAGAAGCaat > 5:86298/1‑148 (MQ=255) cTCGTTCAAGTCATCCAAGACTAGCGGGCTGCGGCGTGCGGGCAAAGAGGCATGTGACCGTGTCGTAGCTTATTGCTGGCAGGGTTGGAATGCGCGGTCTTTACTCCCAGAGATCGGCCTTATGCCGATTCCCCCTAGGAGAAGCaat > 6:33590/1‑148 (MQ=255) ttCAAGTCATCCAAGACTAGCGGGCTGCGGCGTGCGGGCAAAGAGGCATGTGACCGTGTCGTAGCTTATTGCTGGCAGGGTTGGAATGCGCGGTCTTTACTCCCAGAGATCGGCCTTATGCCGATTCCCCCTAGGAGAAGCaatgaaat < 6:86298/149‑1 (MQ=255) aaGTCATCCAAGACTAGCGGGCTGCGGCGTGCGGGCAAAGAGGCATGTGACCGTGTCGTAGCTTATTGCTGGCAGGGTTGGAATGCGCGGTCTTTACTCCCAGAGATCGGCCTTATGCCGATTCCCCCTAGGAGAAGCAATGAAATGAg > 6:114154/1‑149 (MQ=255) tCCAAGACTAGCGGGCTGCGGCGTGCGGGCAAAGAGGCATGTGACCGTGTCGTAGCTTATTGCTGGCAGGGTTGGAATGCGCGGTCTTTACTCCCAGAGATCGGCCTTATGCCGATTCCCCCTAGGAGAAGCAATGAAATGAGCATAg > 6:242492/1‑148 (MQ=255) cAAGACTAGCGGGCTGCGGCGTGCGGGCAAAGAGGCATGTGACCGTGTCGTAGCTTATTGCTGGCAGGGTTGGAATGCGCGGTCTTTACTCCCAGAGATCGGCCTTATGCCGATTCCACCTAGGAGAAGCAATGAAATGAGCATAGTAc > 7:79744/1‑149 (MQ=255) tAGCGGGCTGCGGCGTGCGGGCAAAGAGGCATGTGACCGTGTCGTAGCTTATTGCTGGCAGGGTTGGAATGCGCGGTCTTTACTCCCAGAGATCGGCCTTATGCCGATTCCCCCTAGGAGAAGCAATGAAATGAGCATAGTACGCACAg > 2:18290/1‑149 (MQ=255) gCGGGCTGCGGCGTGCGGGCAAAGAGGCATGTGACCGTTTCGTAGCTTATTGCTGGCAGGGTTGGAATGCGCGGTCTTTACTCCCAGAGATCGGCCTTATGCCGATTCCCCCTAGGAGAAGCAATGAAATGAGCATAGTACGCACAGc < 7:119126/148‑1 (MQ=255) gCGGGCTGCGGCGTGCGGGCAAAGAGGCATGTGACCGTGTCGTAGCTTATTGCTGGCAGGGTTGGAATGCGCGGTCTTTACTCCCAGAGATCGGCCTTATGCCGATTCCCCCTAGGAGAAGCAATGAAATGAGCATAGTACGCACAGc < 5:114154/148‑1 (MQ=255) gCGGGCTGCGGCGTGCGGGCAAAGAGGCATGTGACCGTGTCGTAGCTTATTGCTGGCAGGGTTGGAATGCGCGGTCTTTACTCCCAGAGATCGGCCTTATGCCGATTCCCCCTAGGAGAAGCAATGAAATGAGCATAGTACGCACAGc < 1:146763/148‑1 (MQ=255) gCGGGCTGCGGCGTGCGGGCAAAGAGGCATGTGACCGTGTCGTAGCTTATTGCTGGCAGGGTTGGAATGCGCGGTCTTTACTCCCAGAGATCGGCCTTATGCCGATTCCCCCTAGGAGAAGCAATGAAATGAGCATAGTACGCACAGCg > 3:116547/1‑149 (MQ=255) tGCGGCGTGCGGTCAAAGAGGCATGTGACCGTGTCGTAGCTTATTGCTGGCAGGGTTGGAATGCGCGGTCTTTACTCCCAGAGATCGGCCTTATGCCGATTCCCCCTAGGAGAAGCAATGAAATGAGCATAGTACGCACAGCGTTAccc > 4:106686/1‑149 (MQ=255) tGCGGCGTGCGGTCAAAGAGGCATGTGACCGTGTCGTAGCTTATTGCTGGCAGGGTTGGAATGCGCGGTCTTTACTCCCAGAGATCGGCCTTATGCCGATTCCCCCTAGGAGAAGCAATGAAATGAGCATAGTACGCACAGCGTTAccc > 4:111383/1‑149 (MQ=255) cggcgTGCGGTCAAAGAGGCATGTGACCGTGTCGTAGCTTATTGCTGGCAGGGTTGGAATGCGCGGTCTTTACTCCCAGAGATCGGCCTTATGCCGATTCCCCCTAGGAGAAGCAATGAAATGAGCATAGTACGCACAGCGTTAcccc < 3:106686/148‑1 (MQ=255) cggcgTGCGGTCAAAGAGGCATGTGACCGTGTCGTAGCTTATTGCTGGCAGGGTTGGAATGCGCGGTCTTTACTCCCAGAGATCGGCCTTATGCCGATTCCCCCTAGGAGAAGCAATGAAATGAGCATAGTACGCACAGCGTTAcccc < 3:111383/148‑1 (MQ=255) cggcgTGCGGGCAAAGAGGCATGTGACCGTGTCGTAGCTTATTGCTGGCAGGGTTGGAATGCGCGGTCTTTACTCCCAGAGATCGGCCTTATGCCGATTCCCCCTAGGAGAAGCAATGAAATGAGCATAGTACGCACAGCGTTACCCCt < 1:18290/149‑1 (MQ=255) agGCATGTGACCGTGTCGTAGCTTATTGCTGGCAGGGTTGGAATGCGCGGTCTTTACTCCCAGAGATCGGCCTTATGCCGATTCCCCCTAGGAGAAGCAATGAAATGAGCATAGTACGCACAGCGTTACCCCTGGTACTGCTCACCAgt > 4:80940/1‑149 (MQ=255) gCATGTGACCGTGTCGTAGCTTATTGCTGGCAGGGTTGGAATGCGCGGTCTTTACTCCCAGAGATCGGCCTTATGCCGATTCCCCCTAGGAGAAGCAATGAAATGAGCATAGTACGCACAGCGTTACCCCTGGTACTGCTCACCa < 4:103651/145‑1 (MQ=255) gCATGTGACCGTGTCGTAGCTTATTGCTGGCAGGGTTGGAATGCGCGGTCTTTACTCCCAGAGATCGGCCTTATGCCGATTCCCCCTAGGAGAAGCAATGAAATGAGCATAGTACGCACAGCGTTACCCCTGGTACTGCTCACCa > 3:103651/1‑145 (MQ=255) gCATGTGAACGTGTCGTAGCTTATTGCTGGCAGGGTTGGAATGCGCGGTCTTTACTCCCAGAGATCGGCCTTATGCAGATTCACCATAGGAGAAGCAAAGAAATGAGCATAGTACGCACAGCGTTACCCCTGGTACTGCTCACCAgtgt > 7:142016/1‑149 (MQ=255) aTGTGACCGTGTCGTAGCTTATTGCTGGCAGGGTTGGAATGCGCGGTCTTTACTCCCAGAGATCGGCCTTATGCCGATTCCCCCTAGGAGAAGCAATGAAATGAGCATAGTACGCACAGCGTTACCCCTgg > 6:177852/1‑131 (MQ=255) aTGTGACCGTGTCGTAGCTTATTGCTGGCAGGGTTGGAATGCGCGGTCTTTACTCCCAGAGATCGGCCTTATGCCGATTCCCCCTAGGAGAAGCAATGAAATGAGCATAGTACGCACAGCGTTACCCCTgg < 5:177852/131‑1 (MQ=255) tgtgACCGTGTCGTAGCTTATTGCTGGCAGGGTTGGAATGCGCGGTCTTTACTCCCAGAGATCGGCCTTATGCCGATTCCCCCTAGGAGAAGCAATGAAATGAGCATAGTACGCACAGCGTTACCCCTGGTACTGCTCACCAGTGTGtt < 8:79744/149‑1 (MQ=255) tgACCGTGTCGTAGCTTATTGGTGGGAGGGTTGGAATGCGCGGTCTTTACTCCCAGAGATCGGCCTTATGCCGATTCCCCCTAGGAGAAGCAATGAAATGAGCATAGTACGCACAGCGTTACCCCTGGTACTGCTCACCAGTGTGTTGa < 8:142016/149‑1 (MQ=255) cGTGTCGTAGCTTATTGCTGGCAGGGTTGGAATGCGCGGTCTTTACTCCCAGAGATCGGCCTTATGCCGATTCCCCCTAGGAGAAGCAATGAAATGAGCATAGTACGCACAGCGTTACCCCTGGTACTGCTCACCAGTGTGTTGACTgg < 4:116547/149‑1 (MQ=255) gTAGCTTATTGCTGGCAGGGTTGGAATGCGCGGTCTTTACTCCCAGAGATCGGCCTTATGCCGATTCCCCCTAGGAGAAGCAATGAAATGAGCATAGTACGCACAGCGTTACCCCTGGTACTGCTCACCAGTGTGTTGACTGGTtgtg > 2:66548/1‑148 (MQ=255) ttATTGCTGGCAGGGTTGGAATGCGCGGTCTTTACTCCCAGAGATCGGCCTTATGCCGATTCCCCCTAGGAGAAGCAATGAAATGAGCATAGTACGCACAGCGTTACCCCTGGTACTGCTCACCAGTGTGTTGACTGGTTGTGCAGGtt > 7:230013/1‑149 (MQ=255) ttATTGCTGACAGGGTTGGAATGCGCGGTCTTTACTCCCAGAGATCGGCCTTATGCCGATTCCCCCTAGGAGAAGCAATGAAATGAGCATAGTACGCACAGCGTTACCCCTGGTACTGCTCACCAGTGTGTTGACTGGTTGTGCAGGtt > 1:250687/1‑149 (MQ=255) tATTGCTGGCAGGGTTGGAATGCGCGGTCTTTACTCCCAGAGATCGGCCTTATGCCGATTCCCCCTAGGAGAAGCAATGAAATGAGCATAGTACGCACAGCGTTACCCCTGGTACTGCTCACCAGTGTGTTGACTGGTTGTGCAGGttt > 4:128962/1‑149 (MQ=255) ttGCTGGCAGGGTTGGAATGCGCGGTCTTTACTCCCAGAGATCGGCCTTATGCCGATTCCCCCTAGGAGAAGCAATGAAATGAGCATAGTACGCACAGCGTTACCCCTGGTACTGCTCACCAGTGTGTTGACTGGTTGTGCAGGTTTg > 5:76904/1‑148 (MQ=255) cTGGCAGGGTTGGAATGCGCGGTCTTTACTCCCAGAGATCGGCCTTATGCCGATTCCCCCTAGGAGAAGCAATGAAATGAGc > 7:197964/1‑82 (MQ=255) cTGGCAGGGTTGGAATGCGCGGTCTTTACTCCCAGAGATCGGCCTTATGCCGATTCCCCCTAGGAGAAGCAATGAAATGAGc < 8:197964/82‑1 (MQ=255) gCAGGGTTGGAATGCGCGGTCTTTACTCCCAGAGATCGGCCTTATGCCGATTCCCCCTAGGAGAAGCAATGAAATGAGCATAGTACGCACAGCGTTACCCCTGGTACTGCTCACCAGTGTGTTGACTGGTTGTGCAGGTTTGCaaaaa < 6:76904/148‑1 (MQ=255) ggTTGGAATGCGCGGTCTTTACTCCCAGAGATCGGCCTTATGCCGATTCCCCCTAGGAGAAGCAATGAAATGAGCATAGTACGCACAGCGTTACCCCTGGTACTGCTCACCAGTGTGTTGACTGGTTGTGCAGGTTTGCAAAAAACCGa > 1:84196/1‑149 (MQ=255) gTTGGAATGCGCGGTCTTTACTCCCAGAGATCGGCCTTATGCCGATTCCCCCTAGGAGAAGCAATGAAATGAGCATAGTACGCACAGCGTTACCCCTGGTACTGCTCACCAGTGTGTTGACTgg > 2:102325/1‑124 (MQ=255) ttGGAATGCGCGGTCTTTACTCCCAGAGATCGGCCTTATGTCGATTCCCCCTAGGAGAAGCAATGAAATGAGCATAGTACGCACAGCGTTACCCCTGGTACTGCTCACCAGTGTGTTGACTGGTTGTGCAGGTTTGCAAAAAACCGACt > 8:48830/1‑149 (MQ=255) ttGGAATGCGCGGTCTTTACTCCCAGAGATCGGCCTTATGCCGATTCCCCCTAGGAGAAGCAATGAAATGAGCATAGTACGCACAGCGTTACCCCTGGTACTGCTCACCAGTGTGTTGACTGGTTGTGCAGGTTTGc > 8:165130/1‑137 (MQ=255) ttGGAATGCGCGGTCTTTACTCCCAGAGATCGGCCTTATGCCGATTCCCCCTAGGAGAAGCAATGAAATGAGCATAGTACGCACAGCGTTACCCCTGGTACTGCTCACCAGTGTGTTGACTGGTTGTGCAGGTTTGc < 7:165130/137‑1 (MQ=255) aTGCGCGGTCTTTACTCCCAGAGATCGGCCTTATGCCGATTCCCCCTAGGAGAAGCAATGAAATGAGCATAGTACGCACAGCGTTACCCCTGGTACTGCTCACCAGTGTGTTGACTGGTTGTGCAGGTTTGCAAAAAACCGACTGGCCg < 2:84196/149‑1 (MQ=255) gcgGTCTTTACTCCCAGAGATCGGCCTTATGCCGATTCCCCCTAGGAGAAGCAATGAAATGAGCATAGTACGCACAGCGTTACCCCTGGTACTGCTCACCAGTGTGTTGACTGGTTGTGCAGGTTTGCAAAAAACCGACTGGCCGAAAt > 3:275212/1‑149 (MQ=255) cgGTCTTTACTCCCAGAGATCGGCCTTATGCCGATTCCCCCTAGGAGAAGCAATGAAATGAGCATAGTACGCACAGCGTTACCCCTGGTACTGCTCACCAGTGTGTTGACTGGTTGTGCAGGTTTGCaaaaa > 5:158240/1‑132 (MQ=255) cgGTCTTTACTCCCAGAGATCGGCCTTATGCCGATTCCCCCTAGGAGAAGCAATGAAATGAGCATAGTACGCACAGCGTTACCCCTGGTACTGCTCACCAGTGTGTTGACTGGTTGTGCAGGTTTGCaaaaa < 6:158240/132‑1 (MQ=255) tttACTCCCAGAGATCGGCCTTATGCCGATTCCCCCTAGGAGAAGCAATGAAATGAGCATAGTACGCACAGCGTTACCCCTGGTACTGCTCACCAGTGTGTTGACTGGTTGTGCAGGTTTGCAAAAAACCGACTGGCCGAAATGTgccg > 4:246800/1‑149 (MQ=255) tttACTCCCAGAGATCGGCCTTATGCCGATTCCCCCTAGGAGAAGCAATGAAATGAGCATAGTACGCACAGCGTTACCCCTGGTACTGCTCACCAGTGTGTTGACTGGTTGTGCAGGTTTGCAAAAAACCGACTGGCCGAAATGTgccg > 5:256016/1‑149 (MQ=255) tttACTCCCAGAGATCGGCCTTATGCCGATTCCCCCTAGGAGAAGCAATGAAATGAGCATAGTACGCACAGCGTTACCCCTGGTACTGCTCACCAGTGTGTTGACTGGTTGTGCAGGTTTGCAAAAAACCGACTGGCCGAAATGTgccg > 2:140070/1‑149 (MQ=255) gttACTCCCAGAGATCGGCCGTATGCCGATTCCCACTAGGAGAAGCAATGAAATGAGCATAGTACGCACAGCGTTACCCCTGGTATTGCTCACCAGTGTGTTGACTGGTTGTGCAGGTTTGCAAAAAACCGACTGGCCGAAATGTgccg < 6:235140/148‑1 (MQ=255) cTCCCAGAGATCGGCCTTATGCCGATTCCCCCTAGGAGAAGCAATGAAATGAGCATAGTACGCACAGCGTTACCCCTGGTACTGCTCACCAGTGTGTTGACTGGTTGTGCAGGTTTGCAAAAAACCGACTGGCCGAAATGTGccgccgg < 5:242492/149‑2 (MQ=255) ccAGAGATCGGCCTTATGCCGATTCCCCCTAGGAGAAGCAATGAAATGAGCATAGTACGCACAGCGTTACCCCTGGTACTGCTCACCAGTGTGTTGACTGGTTGTGCAGGTTTGCAAAAAACCGACTGGCCGAAATGTGCCGCCGTCgg < 1:140070/149‑1 (MQ=255) ccAGAGATCGGCCTTATGCCGATTCCCCCTAGGAGAAGCAATGAAATGAGCATAGTACGCACAGCGTTACCCCTGGTACTGCTCACCAGTGTGTTGACTGGTTGTGCAGGTTTGCAAAAAACCGACTGGCCGAAATGTGCCGCCGTCgg > 7:102932/1‑149 (MQ=255) ccAGAGATCGGCCTTATGCCGATTCCCCCTAGGAGAAGCAATGAAATGAGCATAGTACGCACAGCGTTACCCCTGGTACTGCTCACCAGTGTGTTGACTGGTTGTGCAGGTTTGCAAAAAACCGACTGGCCGAAATGTGCCGCCGTCgg > 4:308710/1‑149 (MQ=255) ccAGAGATCGGCCTTATGCCGATTCCCCCTAGGAGAAGCAATGAAATGAGCATAGTACGCACAGCGTTACCCCTGGTACTGCTCACCAGTGTGTTGACTGGTTGTGCAGGTTTGCAAAAAACCGACTGGCCGAAATGTGCCGCCGTCgg > 4:317208/1‑149 (MQ=255) ccAGAGATCGGCCTTATGCCGATTCCCCCTAGGAGAAGCAATGAAATGAGCATAGTACGCACAGCGTTACCCCTGGTACTGCTCACCAGTGTGTTGACTGGTTGTGCAGGTTTGCAAAAAACCGACTGGCCGAAATGTGCCGCCGTCgg > 4:81713/1‑149 (MQ=255) agagATCGGCCTTATGCCGATTCCCCCTAGGAGAAGCAATGAAATGAGCATAGTACGCACAGCGTTACCCCTGGTACTGCTCACCAGTGTGTTGACTGGTTGTGCAGGTTTGCAAAAAACCGACTGGCCGAAATGTGCCGCCGTCgggg < 3:308710/149‑1 (MQ=255) gaaTCGGCATAAGGCCGATTCCCCCTAGGAGAAGCAATGAAATGAGCATAGTACGCACAGCGTTACCCCTGGTACTGCTCACCAGTGTGTTGACTGGTTGTGCAGGTGTGCAAAAAACCGACTGGCCGAAATGTGCCGCCGTCGGGGgt > 6:177162/3‑149 (MQ=255) gCCTTATGCCGATTCCCCCTAGGAGAAGCAATGAAATGAGCATAGTACGCACAGCGTTACCCCTGGTACTGCTCACCAGTGTGTTGACTGGTTGTGCAGGTTTGCAAAAAACCGACTGGCCGAAATGTGCCGCCGTCGGGGGTGTAggc > 2:150571/1‑149 (MQ=255) gCCTTATGCCGATTCCCCCTAGGAGAAGCAATGAAATGAGCATAGTACGCACAGCGTTACCCCTGGTACTGCTCACCAGTGTGTTGACTGGTTGTGCAGGTTTGCAAAAAACCGACTGGCCGAAATGTGCCGCCGTCGGGGGTGTAggc < 1:150571/149‑1 (MQ=255) cTTATGCCGATTCCCCCTAGGAGAAGCAATGAAATGAGCATAGTACGCACAGCGTTACCCCTGGTACTGCTCACCAGTGTGTTGACTGGTTGTGCAGGTTTGCAAAAAACCGACTGGCCGAAATGTGCCGCCGTCGGGGGTGTAggcgg > 7:245386/1‑149 (MQ=255) cTTATGCCGATTCCCCCTAGGAGAAGCAATGAAATGAGCATAGTACGCACAGCGTTACCCCTGGTACTGCTCACCAGTGTGTTGACTGGTTGTGCAGGTTTGCAAAAAACCGACTGGCCGAAATGTGCCGCCGTCGGGGGTGTAggcg < 8:230013/148‑1 (MQ=255) | TGGAGAAACCTTCGGTCATTGCCATTCCTCGTTCAAGTCATCCAAGACTAGCGGGCTGCGGCGTGCGGGCAAAGAGGCATGTGACCGTGTCGTAGCTTATTGCTGGCAGGGTTGGAATGCGCGGTCTTTACTCCCAGAGATCGGCCTTATGCCGATTCCCCCTAGGAGAAGCAATGAAATGAGCATAGTACGCACAGCGTTACCCCTGGTACTGCTCACCAGTGTGTTGACTGGTTGTGCAGGTTTGCAAAAAACCGACTGGCCGAAATGTGCCGCCGTCGGGGGTGTAGGCGG > NC_002947/1283885‑1284178 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |