Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 149,898 G→T 6.0% T351N (ACC→AAC) ‡ PP_0142 ← ABC transporter permease

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_002947149,8980GT 6.0% 212.6 / 2.0 66T351N (ACC→AAC) ‡PP_0142ABC transporter permease
Reads supporting (aligned to +/- strand):  ref base G (29/33);  new base T (2/2);  total (31/35)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.69e-01

ATGCACCACCTGGCGGCCGAAGCGGTTGCAGATGCCGCGGGCTTCGATTACGCAATTCTGGCCACTCACCAGCCCATCTCCATGAAGAACAGCGCTGCCACCGCATCCAGCACGATGACCACAAAAATCGACTGCACCACTGCCGAGGTGGTGTGTGCCCCCACCGACTCGGCGCTGCCGCTGACCTTGAAGCCTTCCAGGCAGCCGATGGCGGCGATCAGGAAGGCAAAGAACGGTGCCTTGGCCAGGCCTACCAGGAAGTGCTGCACGCCAATGTCGCTTTGCAGCAGCGA  >  NC_002947/149751‑150043
                                                                                                                                                   |                                                                                                                                                 
aTGCACCCCCTGGCGGCCGAAGCGGTTGCAGATGCCGCGGGCTTCGATTACGCAATTCTGGCCACTCACCAGCCCATCTCCATGAAGAACAGCGCTGCCACCGCATCCAGCACGATGACCACAAAAATCGACTGCACCACTGCCGAggt                                                                                                                                                  <  2:182701/149‑1 (MQ=255)
aTGCACCACCTGGCGGCCGAAGCGGTTGCAGATGCCGCGGGCTTCGATTACGCAATTCTGGCCACTCACCAGCCCATCTCCATGAAGAACAGCGCTGCCACCGCATCCAGCACGATGACCACAAAAATCGACTGCACCACTGCCGAggt                                                                                                                                                  >  3:243430/1‑149 (MQ=255)
 tGCACCACCTGGCGGCCGAAGCGGTTGCAGATGCCGCGGGCTTCGATTACGCAATTCTGGCCACTCACCAGCCCATCTCCATGAAGAACAGCGCTGCCACCGCATCCAGCACGATGACCACAAAAATCGACTGCACCACTGCCGAggtg                                                                                                                                                 <  7:227305/149‑1 (MQ=255)
    accaccTGGCGGCCGAAGCGGTTGCAGATGCCGCGGGCTTCGATTACGCAATTCTGGCCACTCACCAGCCCATCTCCATGAAGAACAGCGCTGCCACCGCATCCAGCACGATGACCACAAAAATCGACTGCACCACTGCCGAGtcggtg                                                                                                                                              >  8:125171/1‑149 (MQ=255)
    accaccTGGCGGCCGAAGCGGTTGCAGATGCCGCGGGCTTCGATTACGCAATTCTGGCCACTCACCAGCCCATCTCCATGAAGAACAGCGCTGCCACCGCATCCAGCACGATGACCACAAAAATCGACTGCACCACTGCCGAGgtggtg                                                                                                                                              >  8:220520/1‑149 (MQ=255)
     ccaccTGGCGGCCGAAGCGGTTGCAGATGCCGCGGGCTTCGATTACGCAATTCTGGCCACTCACCAGCCCATCTCCATGAAGAACAGCGCTGCCACCGCATCCAGCACGATGACCACAAAAATCGACTGCACCACTGCCGAGGTGgtgt                                                                                                                                             <  3:245551/149‑1 (MQ=255)
         cTGGCGGCCGAAGCGGTTGCAGATGCCGCGGGCTTCGATTACGCAATTCTGGCCACTCACCAGCCCATCTCCATGAAGAACAGCGCTGCCACCGCATCCAGCACGATGACCACAAAAATCGACTGCACCACTGCCGAGGTGGTGTGTGc                                                                                                                                         >  8:263031/1‑149 (MQ=255)
              ggcCGAAGCGGTTGCAGATGCCGCGGGCTTCGATTACGCAATTCTGGCCACTCACCAGCCCATCTCCATGAAGAACAGCGCTGCCACCGCATCCAGCACGATGACCACAAAAATCGACTGCACCACTGCCGAGGTGGTGTGTGCCCCCa                                                                                                                                    >  1:259602/1‑149 (MQ=255)
                ccGAAGCGGTTGCAGATGCCGCGGGCTTCGATTACGCAATTCTGGCCACTCACCAGCCCATCTCCATGAAGAACAGCGCTGCCACCGCATCCAGCACGATGACCACAAAAATCGACTGCACCACTGCCGAGGTGGTGTGTGCCCCCAcc                                                                                                                                  <  1:310104/149‑1 (MQ=255)
                    aGCGGTTGCAGATGCCGCGGGCTTCGATTACGCAATTCTGGCCACTCACCAGCCCATCTCCATGAAGAACAGCGCTGCCACCGCATCCAGCACGATGACCACAAAAATCGACTGCACCACTGCCGAGGTGGTGTGTGCCCCCACCGACt                                                                                                                              <  2:259602/149‑1 (MQ=255)
                       ggTTGCAGATGCCGCGGGCTTCGATTACGCAATTCTGGCCACTCACCAGCCCATCTCCATGAAGAACAGCGCTGCCACCGCATCCAGCACGATGACCACAAAAATCGACTGCACCACTGCCGAGGTGGTGTGTGCCCCCACCGACTCgg                                                                                                                           <  1:76764/149‑1 (MQ=255)
                        gTTGCAGATGCCGCGGGCTTCGATTACGCAATTCTGGCCACTCACCAGCCCATCTCCATGAAGAACAGCGCTGCCACCGCATCCAGCACGATGACCACAAAAATCGACTGCACCACTGCCGAGTCGGTGGGGGCACACACCACCTCGgc                                                                                                                          <  7:125171/149‑1 (MQ=255)
                            cAGATGCCGCGGGCTTCGATTACGCAATTCTGGCCACTCACCAGCCCATCTCCATGAAGAACAGCGCTGCCACCGCATCCAGCACGATGACCACAAAAATCGACTGCACCACTGCCGAGGTGGTGTGTGCCCCCACCGACTCGGCGCTg                                                                                                                      >  7:199144/1‑149 (MQ=255)
                             aGATGCCGCGTTCTTCGATTACGCAATTCTGGCCACTCACCAGCCCATCTCCATGAAGAACAGCGCTGCCACCTCATCCAGCAAGATGACCACAAAAATCGACTGCACCACTGCCGAGGTGttgtgt                                                                                                                                           <  5:73913/127‑1 (MQ=255)
                             aGATGCCGCGGGCTTCGATTACGCAATTCTGGCCACTCACCAGCCCATCTCCATGAAGAACAGCGCTGCCACCGCATCCAGCACGATGACCACAAAAATCGACTGCACCACTGCCGAGGTGgtgtgt                                                                                                                                           >  6:78591/1‑127 (MQ=255)
                             aGATGCCGCGGGCTTCGATTACGCAATTCTGGCCACTCACCAGCCCATCTCCATGAAGAACAGCGCTGCCACCGCATCCAGCACGATGACCACAAAAATCGACTGCACCACTGCCGAGGGGgtgtgt                                                                                                                                           <  5:78591/127‑1 (MQ=255)
                                tGCCGCGGGCTTCGATTACGCAATTCTGGCCACTCACCAGCCCATCTCCATGAAGAACAGCGCTGCCACCGCATCCAGCACGATGACCACAAAAATCGACTGCACCACTGCCGAGGTGGTGTGTGCCCCCACCGACTCGGCGCTGCCGc                                                                                                                  <  3:76959/149‑1 (MQ=255)
                                   cgctGGCTTCGATTACGCAATTCTGGCCACTCACCAGCCCATCTCCATGAAGAACAGCGCTGCCACCGCATCCAGCAGGATGACCACAAAAATCGACTGCACCACTGCCGAGGTGGTGTGTGCCCCCACCGACTCGGCGCTGCCGCTGa                                                                                                               <  8:2833/149‑1 (MQ=255)
                                    gcgGGCTTCGATTACGCAATTCTGGCCACTCACCAGCCCATCTCCATGAAGAACAGCGCTGCCACCGCATCCAGCACGATGACCACAAAAATCGACTGCACCACTGCCGAGGTGGTGTGTGCCACCACCGACTCGGCGCTGCCGCTGAc                                                                                                              >  1:164621/1‑149 (MQ=255)
                                            cGATTACGCAATTCTGGCCACTCACCAGCCCATCTCCATGAAGAACAGCGCTGCCACCGCATCCAGCACGATGACCACAAAAATCGACTGCACCACTGCCGAGGTGGTGTGTGCCCCCACCGACTCGGCGCTGCCGCTGACCTTGaa                                                                                                        <  7:276986/147‑1 (MQ=255)
                                             gATTACGCAATTCTGGCCACTCACCAGCCCATCTCCATGAAGAACAGCGCTGCCACCGCATCCAGCACGATGACCACAAAAATCGACTGCACCACTGCCGAGGTGGTGTGTGCCCCCACCGACTCGGCGCTGCCGCTGACCTTGAAGcc                                                                                                     >  4:63974/1‑149 (MQ=255)
                                             gATTACGCAATTCTGGCCACTCACCAGCCCATCTCCATGAAGAACAGCGCTGCCACCGCATCCAGCACGATGACCACAAAAATCGACTGCACCACTGCCGAGGTGGTGTGTGCCCCCACCGACTCGGCGCTGCCGCTGACCTTGAAGcc                                                                                                     >  5:299413/1‑149 (MQ=255)
                                                  cGCAATTCTGGCCACTCACCAGCCCATCTCCATGAAGAACAGCGCTGCCACCGCATCCAGCACGATGACCACAAAAATCGACTGCACCACTGCCGAGGTGGTGTGTGCCCCCACCGACTCGGCGCTGCCGCTGACCTTGaa                                                                                                        <  4:186214/141‑1 (MQ=255)
                                                  cGCAATTCTGGCCACTCACCAGCCCATCTCCATGAAGAACAGCGCTGCCACCGCATCCAGCACGATGACCACAAAAATCGACTGCACCACTGCCGAGGTGGTGTGTGCCCCCACCGACTCGGCGCTGCCGCTGACCTTGaa                                                                                                        >  3:186214/1‑141 (MQ=255)
                                                  cGCAATTCTGGCCACTCACCAGCCCATCTCCATGAAGAACAGCGCTGCCACCGCATCCAGCACGATGACCACAAAAATCGACTGCACCACTGCCGAGGTGGTGTGTGCCCCCACCGACTCGGCGCTGCCGCTGACCTTGAAGCCTTCCa                                                                                                <  6:299413/149‑1 (MQ=255)
                                                  cGCAATTCTGGCCACTCACCAGCCCATCTCCATGAAGAACAGCGCTGCCACCGCATCCAGCACGATGACCACAAAAATCGACTGCACCACTGCCGAGGTGGTGTGTGCCCCCACCGACTCGGCGCTGCCGCTGACCTTGAAGCCTTCCa                                                                                                <  5:729/149‑1 (MQ=255)
                                                     aaTTCTGGCCACTCACCAGCCCATCTCCATGAAGAACAGCGCTGCCACCGCATCCAGCACGATGACCACAAAAATCGACTGCACCACTGCCGAGGTGGTGTGTGCCCCCACCGACTCGGCGCTGCCGCTGACCTTGAAGCCTTCCa                                                                                                >  5:250651/1‑146 (MQ=255)
                                                          tGGCCACTCACCAGCCCATCTCCATGAAGAACAGCGCTGCCACCGCATCCAGCACGATGACCACAAAAATCGACTGCACCACTGCCGAGGTGGTGTGTGCCCCCACCGACTCGGCGCTGCCGCTGACCTTGAAGCCTTCCAGGCAGcc                                                                                         >  8:41736/1‑148 (MQ=255)
                                                            gCCACTCACCAGCCCATCTCCATGAAGAACAGCGCTGCCACCGCATCCAGCACGATGACCACAAAAATCGACTGCACCACTGCCGAGGTGGTGTGTGCCCCCACCGACTCGGCGCTGCCGCTGACCTTGAAGCCTTCCAGGCAGCCGAt                                                                                      <  7:263031/149‑1 (MQ=255)
                                                                 tCACCAGCCCATCTCCATGAAGAACAGCGCTGCCACCGCATCCAGCACGATGACCACAAAAATCGACTGCACCACTGCCGAGGTGGTGTGTGCCCCCACCGACTCGGCGCTGCCGCTGACCTTGAAGCCTTCCAGGCAGCCGATggcgg                                                                                 >  2:57601/1‑149 (MQ=255)
                                                                      aGCCCATCTCCATGAAGAACAGCGCTGCCACCGCATCCAGCACGATGACCACAAAAATCGACTGCACCACTGCCGAGGTGGTGTGTGCCCCCACCGACTCGGCGCTGCCGCTGACCTTGAAGCCTTCCAGGCAGCCGATGGCGGCGATc                                                                            <  1:57601/149‑1 (MQ=255)
                                                                      aGCCCATCTCCATGAAGAACAGCGCTGCCACCGCATCCAGCACGATGACCACAAAAATCGACTGCACCACTGCCGAGGTGGTGTGTGCCCCCACCGACTCGGCGCTGCCGCTGACCTTGAAGCCTTCCAGGCAGCCGATGGCGGCGATc                                                                            <  7:41736/149‑1 (MQ=255)
                                                                        cccATCTCCATGAAGAACAGCGCTGCCACCGCATCCAGCACGATGACCACAAAAATCGACTGCACCACTGCCGAGGTGGTGTGTGCCCCCACCGACTCGGCGCTGCCGCTGACCTTGAAGCCTTCCAGGCAGCCGATGGCGGCGATCAg                                                                          <  7:176126/149‑1 (MQ=255)
                                                                          cATCTCCATGAAGAACAGCGCTGCCACCGCATCCAGCACGATGACCACAAAAATCGACTGCACCACTGCCGAGGTGGTGTGTGCCCCCACCGACTCGGCGCTGCCGCTGACCTTGAAGCCTTCCAGGCAGCCGATGGCGGCGATCAgg                                                                         >  3:259855/1‑148 (MQ=255)
                                                                          cATCTCCATGAAGAACAGCGCTGCCACCGCATCCAGCACGATGACCACAAAAATCGACTGCACCACTGCCGAGGTGGTGTGTGCCCCCACCGACTCGGCGCTGCCGCTGACCTTGAAGCCTTCCAGGCAGCCGATGGCGGCGATCAGGa                                                                        <  5:160683/149‑1 (MQ=255)
                                                                           aTCTCCATGAAGAACAGCGCTGCCACCGCATCCAGCACGATGACCACAAAAATCGACTGCACCACTGCCGAGGTGGTGTGTGCCCCCACCGACTCGGCGCTGCCGCTGACCTTGAAGCCTTCCAGGCAGCCGATGGCGGCGATCAgg                                                                         >  4:192262/1‑147 (MQ=255)
                                                                               ccATGAAGAACAGCGCTGCCACCGCATCCAGCACGATGACCACAAAAATCGACTGCACCACTGCCGAGGTGGTGTGTGCCCCCACCGACTCGGCGCTGCCGCTGAcc                                                                                                             >  6:134445/1‑107 (MQ=255)
                                                                               ccATGAAGAACAGCGCTGCCACCGCATCCAGCACGATGACCACAAAAATCGACTGCACCACTGCCGAGGTGGTGTGTGCCCCCACCGACTCGGCGCTGCCGCTGAcc                                                                                                             <  5:134445/107‑1 (MQ=255)
                                                                                cATGAAGAACAGCGCTGCCACCGCATCCAGCACGATGACCACAAAAATCGACTGCACCACTGCCGAGGTGGTGTGTGCCCCCACCGACTCGGCGCTGCCGCTGACCTTGAAGCCtt                                                                                                   >  5:55949/1‑116 (MQ=255)
                                                                                cATGAAGAACAGCGCTGCCACCGCATCCAGCACGATGACCACAAAAATCGACTGCACCACTGCCGAGGTGGTGTGTGCCCCCACCGACTCGGCGCTGCCGCTGACCTTGAAGCCtt                                                                                                   <  6:55949/116‑1 (MQ=255)
                                                                                 aTGAAGAACAGCGCTGCCACCGCATCCAGCACGATGACCACAAAAATCGACTGCACCACTGCCGAGGTGGTGTGTGCCCCCACCGCCTCGCCGCTGCCGGTGCCATTCAAGCCTTCCAGCCAGCCGATGGCGGCGAGCAGGAAGGCaa                                                                  >  7:188138/1‑148 (MQ=255)
                                                                                    aagaaCAGCGCTGCCACCGCATCCAGCACGATGACCACAAAAATCGACTGCACCACTGCCGAGGTGGTGTGTGCCCCCACCGACTCGGCGCTGCCGCTGACCTTGAAGCCTTCCAGGCAGCCGATGGCGGCGATCAGGAAGGCAAAGaa                                                              >  5:79852/1‑149 (MQ=255)
                                                                                     agaaCAGCGCTGCCACCGCATCCAGCACGATGACCACAAAAATCGACTGCACCACTGCCGAGGTGGTGTGTGCCCCCACCGACTCGGCGCTGCCGCTGACCTTGAAGCCTTCCAGGCAGCCGATGGCGGCGATCAGGAAGGCAAAGAAc                                                             <  3:192262/149‑1 (MQ=255)
                                                                                      gaaCAGCGCTGCCACCGCATCCAGCACGAGTACCACAAATATCGACTGCACCACTGCCGAGGTGGTGTGTGCCCCCACCGACTCGGCGCTGCCGCTGACCTTGAAGCCTTCCAGGCAGCCGATGGCGGCGATCAGGAAGGCAAAGAACg                                                            <  2:164621/149‑1 (MQ=255)
                                                                                            cgcTGCCACCGCATCCAGCACGATGACCACAAAAATCGACTGCACCACTGCCGAGGTGGTGTGTGCCCCCACCGACTCGGCGCTGCCGCTGACCTTGAAGCCTTCCAGGCAGCCGATGGCGGCGATCAGGAAGGCAAAGAACGGTGCCt                                                      >  3:265272/1‑149 (MQ=255)
                                                                                            cgcTGCCACCGCATCCAGCACGATGACCACAAAAATCGACTGCACCACTGCCGAGGTGGTGTGTGCCCCCACCGACTCGGCGCTGCCGCTGACCTTGAAGCCTTCCAGGCAGCCGATGGCGGCGATCAGGAAGGCAAAGAACGGTGCCt                                                      <  4:259855/149‑1 (MQ=255)
                                                                                                 ccACCGCATCCAGCACGATGACCACAAAAATCGACTGCACCACTGCCGAGGTGGTGTGTGCCCCCACCGACTCGGCGCTGCCGCTGACCTTGAAGCCTTCCAGGCAGCCGATGGCGGCGATCAGGAAGGCAAAGAACGGTGCCTTGGc                                                  >  6:12269/1‑148 (MQ=255)
                                                                                                     cGCATCCAGCACGATGACCACAAAAATCGACTGCACCACTGCCGAGGTGGTGTGTGCCCCCACCGACTCGGCGCTGCCGCTGACCTTGAAGCCTTCCAGGCAGCCGATGGCGGCGATCAGGAAGGCAAAGAACGGTGCCTTGGCCAGGc                                             <  4:243430/149‑1 (MQ=255)
                                                                                                         tCCAGCACGATGACCACAAAAATCGACTGCACCACTGCCGAGGTGGTGTGTGCCCCCACCGACTCGGCGCTGCCGCTGACCTTGAAGCCTTCCAGGCAGCCGATGGCGGCGATCAGGAAGGCAAAGAACGGt                                                          <  5:96085/132‑1 (MQ=255)
                                                                                                         tCCAGCACGATGACCACAAAAATCGACTGCACCACTGCCGAGGTGGTGTGTGCCCCCACCGACTCGGCGCTGCCGCTGACCTTGAAGCCTTCCAGGCAGCCGATGGCGGCGATCAGGAAGGCAAAGAACGGt                                                          >  6:96085/1‑132 (MQ=255)
                                                                                                            aGCACGATGACCACAAAAATCGACTGCACCACTGCCGAGGTGGTGTGTGCCCCCACCGACTCGGCGCTGCCGCTGACCTTGAAGCCTTCCAGGCAGCCGATGGCGGCGATCAGGAAGGCAAAGAACGGTGCCTTGGCCAGGCCTACCAg                                      <  8:199144/149‑1 (MQ=255)
                                                                                                                 gATGACCACAAAAATCGACTGCACCACTGCCGAGGTGGTGTGTGCCCCCACCGACTCGGCGCTGCCGCTGACCTTGAAGCCTTCCAGGCAGCCGATGGCGGCGATCAGGAAGGCAAAGAACGGTGCCTTg                                                    >  2:133257/1‑130 (MQ=255)
                                                                                                                 gATGACCACAAAAATCGACTGCACCACTGCCGAGGTGGTGTGTGCCCCCACCGACTCGGCGCTGCCGCTGACCTTGAAGCCTTCCAGGCAGCCGATGGCGGCGATCAGGAAGGCAAAGAACGGTGCCTTg                                                    <  1:133257/130‑1 (MQ=255)
                                                                                                                  aTGACCACAAAAATCGACTGCACCACTGCCGAGGTGGTGTGTGCCCCCACCGACTCGGCGCTGCCGCTGACCTTGAAGCCTTCCAGGCAGCCGATGGCGGCGATCAGGAAGGCAAAGAACGGTGCCTTGGCCAGGCCTACCAGGAAGtg                                <  6:79852/149‑1 (MQ=255)
                                                                                                                   tGACCACAAAAATCGACTGCACCACTGCCGAGGTGGTGTGTGCCCCCACCGACTCGGCGCTGCCGCTGACCTTGAAGCCTTCCAGGCAGCCGATGGCGGCGATCAGGAAGGCAAAGAACGGTGCCTTGGCCAGGCCTACCAGGAAGtgc                               <  5:12269/149‑1 (MQ=255)
                                                                                                                      ccgcaAAAATCGACTGCACCACTGCCGAGGTGGTGTGTGCCCCCACCGACTCGGCGCTGCCGCTGACCTTGAAGCCTTCCAGGCAGCCGATGGCGGCGATCAGGAAg                                                                      >  1:290095/4‑107 (MQ=255)
                                                                                                                      ccgcaAAAATCGACTGCACCACTGCCGAGGTGGTGTGTGCCCCCACCGACTCGGCGCTGCCGCTGACCTTGAAGCCTTCCAGGCAGCCGATGGCGGCGATCAGGAAg                                                                      <  2:290095/104‑1 (MQ=255)
                                                                                                                      ccACAAAAATCGACTGCACCACTGCCGAGGTGGTGTGTGCCCCCACCGACTCGGCGCTGCCGCTGACCTTGAAGCCTTCCAGGCAGCCGATGGCGGCGATCAGGAAGGCAAAGAACGGTGCCTTGGCCAGGCCTACCAGGAAGtgctgc                            <  4:265272/149‑1 (MQ=255)
                                                                                                                      ccACAAAAATCGACTGCACCACTGCCGAGGTGGTGTGTGCCCCCACCGACTCGGCGCTGCCGCTGACCTTGAAGCCTTCCAGGCAGCCGATGGCGGCGATCAGGAAGGCAAAGAACGGTGCCTTGGCCAGGCCTACCAGGAAGtgctg                             >  2:229205/1‑148 (MQ=255)
                                                                                                                        acaAAAATCGACTGCACCACTGCCGAGGTGGTGTGTGCCCCCACCGACTCGGCGCTGCCGCTGACCTTGAAGCCTTCCAGGCAGCCGATGGCGGCGATCAGGAAGGCAAAGAACGGTGCCTTGGCCAGGCCTACCAGGAAGTGCTGCAc                          >  1:78959/1‑149 (MQ=255)
                                                                                                                        acaAAAATCGACTGCACCACTGCCGAGGTGGTGTGTGCCCCCACCGACTCGGCGCTGCCGCTGACCTTGAAGCCTTCCAGGCAGCCGATGGCGGCGATCAGGAAGGCAAAGAACGGTGCCTTGGCCAGGCCTACCAGGAAGTGCTGCAc                          >  6:240024/1‑149 (MQ=255)
                                                                                                                              aTCGACTGCACCACTGCCGAGGTGGTGTGTGCCCCCACCGACTCGGCGCTGCCGCTGACCTTGAAGCCTTCCAGGCAGCCGATGGCGGCGATCAGGAAGGCAAAGAACGGTGCCTTGGCCAGGCCTACCAGGAAGTGCTGCACGCCAAt                    <  7:220520/149‑1 (MQ=255)
                                                                                                                                    tGCACCACTGCCGAGGTGGTGTGTGCCCCCACCGACTCGGCGCTGCCGCTGACCTTGAAGCCTTCCAGGCAGCCGATGGCGGCGATCAGGAAGGCAAAGAACGGTGCCTTGGCCAGGCCTACCAGGAAGTGCTGCACGCCAATGTCGCt              >  7:243189/1‑149 (MQ=255)
                                                                                                                                         cagcgCCGAGTCGGTGGGGGCACACACCACCTCGGCGCTGCCGCTGACCTTGAAGCCTTCCAGGCAGCCGATGGCGGCGATCAGGAAGGCAAAGAACGGTGCCTTGGCCAGGCCTACCAGGAAGTGCTGCACGCCAATGTCGCTTTg           >  6:299810/5‑147 (MQ=38)
                                                                                                                                           gcgCCGAGTCGGTGGGGGCACACACCACCTCGGCGCTGCCGCTGACCTTGAAGCCTTCCAGGCAGCCGATGGCGGCGATCAGGAAGGCAAAGAACGGTGCCTTGGCCAGGCCTACCAGGAAGTGCTGCACGCCAATGTCGCTTTgcagc       <  5:299810/147‑1 (MQ=255)
                                                                                                                                              ccGAGTCGGTGGGGGCACACACCACCTCGGCGCTGCCGCTGACCTTGAAGCCTTCCAGGCAGCCGATGGCGGCGATCAGGAAGGCAAAGAACGGTGCCTTGGCCAGGCCTACCAGGAAGTGCTGCACGCCAATGTCGCTTTGCagcagc    >  8:223707/1‑149 (MQ=255)
                                                                                                                                              ccGAGGTGGTGTGTGCCCCCACCGACTCGGCGCTGCCGCTGACCTTGAAGCCTTCCAGGCAGCCGATGGCGGCGATCAGGAAGGCAAAGAACGGTGCCTTGGCCAGGCCTACCAGGAAGTGCTGCACGCCAATGTCGCTTTgcagca      >  2:208127/1‑147 (MQ=255)
                                                                                                                                              ccGAGGTGGTGTGTGCCCCCACCGACTCGGCGCTGCCGCTGACCTTGAAGCCTTCCAGGCAGCCGATGGCGGCGATCAGGAAGGCAAAGAACGGTGCCTTGGCCAGGCCTACCAGGAAGTGCTGCACGCCAATGTCGCTTTgcagca      <  1:208127/147‑1 (MQ=255)
                                                                                                                                                gAGGTGGTGTGTGCCCCCACCGACTCGGCGCTGCCGCTGACCTTGAAGCCTTCCAGGCAGCCGATGGCGGCGATCAGGAAGGCAAAGAACGGTGCCTTGGCCAGGCCTACCAGGAAGTGCTGCACGCCAATGTCGCtt             <  7:240313/138‑1 (MQ=255)
                                                                                                                                                gAGGTGGTGTGTGCCCCCACCGACTCGGCGCTGCCGCTGACCTTGAAGCCTTCCAGGCAGCCGATGGCGGCGATCAGGAAGGCAAAGAACGGTGCCTTGGCCAGGCCTACCAGGAAGTGCTGCACGCCAATGTCGCtt             >  8:240313/1‑138 (MQ=255)
                                                                                                                                                 aGGTGGTGTGTGCCCCCACCGACTCGGCGCTGCCGCTGACCTTGAAGCCTTCCAGGCAGCCGATGGCGGCGATCAGGAAGGCAAAGAACGGTGCCTTGGCCAGGCCTACCAGGAAGTGCTGCACGCCAATGTCGCTTTGCAGCAGCGa  >  4:405/1‑148 (MQ=255)
                                                                                                                                                   |                                                                                                                                                 
ATGCACCACCTGGCGGCCGAAGCGGTTGCAGATGCCGCGGGCTTCGATTACGCAATTCTGGCCACTCACCAGCCCATCTCCATGAAGAACAGCGCTGCCACCGCATCCAGCACGATGACCACAAAAATCGACTGCACCACTGCCGAGGTGGTGTGTGCCCCCACCGACTCGGCGCTGCCGCTGACCTTGAAGCCTTCCAGGCAGCCGATGGCGGCGATCAGGAAGGCAAAGAACGGTGCCTTGGCCAGGCCTACCAGGAAGTGCTGCACGCCAATGTCGCTTTGCAGCAGCGA  >  NC_002947/149751‑150043

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑