Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | NC_002947 | 1,541,267 | C→T | 8.0% | A86A (GCG→GCA) | panE ← | 2‑dehydropantoate 2‑reductase |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_002947 | 1,541,267 | 0 | C | T | 8.0% | 249.1 / 6.3 | 86 | A86A (GCG→GCA) | panE | 2‑dehydropantoate 2‑reductase |
Reads supporting (aligned to +/- strand): ref base C (37/42); new base T (2/5); total (39/47) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 4.48e-01 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
CCCCTCGCGGAAGGCGCCTTCGGTGCTGGAGGCGAAGATGCAGCGAGCGTGAGGCACCAGGTCGGCGACTTCATCCTGGCTGCCCAGGCCATTCTGCAACAGCAGCACTTCGGCGCTCTCGGCCAGCCGTGGCGCTACACCGGCAATCGCCGGGGCAGCGTCATAGGCCTTGCAGGCCACCAGCAGCCGGTGGATCGGGCCTTGCGCTTGTGCCGTTTCGGCCGGTATGGCGTAGCGCCGGGTTTGGTCCTGCTCGACCAGGGTCAGGCCACCGGCCTGCTGATAGGCCTG > NC_002947/1541120‑1541410 | ccccTCGCGGAAGGCGCCTTCGGTGCTGGAGGCGAAGATGCAGCGAGCGTGAGGCACCAGGTCGGCGACTTCATCCTGGCTGCCCAGGCCATTCTGCAACAGCAGCACTTCGGCGCTCTCGGCCAGCCGTGGCGCTACACCGGCAATc < 6:141538/148‑1 (MQ=255) ccccTCGCGGAAGGCGCCTTCGGTGCTGGAGGCGAAGATGCAGCGAGCGTGAGGCACCAGGTCGGCGACTTCATCCTGGCTGCCCAGGCCATTCTGCAACAGCAGCACTTCGGCGCTCTCGGCCAGCCGTGGCGCTACACCGGCAATCg < 2:320654/149‑1 (MQ=255) ccTCGCGGAAGGCGCCTTCGGTGCTGGAGGCGAAGATGCAGCGAGCGTGAGGCACCAGGTCGGCGACTTCATCCTGGCTGCCCAGGCCATTCTGCAACAGCAGCACTTCGGCGCTCTCGGCCAGCCGTGGCGCTACACCGGCAATCGcc > 8:47502/1‑149 (MQ=255) ccTCGCGGAAGGCGCCTTCGGTGCTGGAGGCGAAGATGCAGCGAGCGTGAGGCACCAGGTCGGCGACTTCATCCTGGCTGCCCAGGCCATTCTGCAACAGCAGCACTTCGGCGCTCTCGGCCAGCCGTGGCGCTACACCGGCAATCGcc > 5:291667/1‑149 (MQ=255) cTCGCGGAAGGCGCCTTCGGTGCTGGAGGCGAAGATGCAGCGAGCGTGAGGCACCAGGTCGGCGACTTCATCCTGGCTGCCCAGGCCATTCTGCAACAGCAGCACTTCGGCGCTCTCGGCCAGCCGTGGCGCTACACCGGCAATCGCCg > 8:111485/1‑149 (MQ=255) cTCGCGGAAGGCGCCTTCGGTGCTGGAGGCGAAGATGCAGCGAGCGTGAGGCACCAGGTCGGCGACTTCATCCTGGCTGCCCAGGCCATTCTGCAACAGCAGCACTTCGGCGCTCTCGGCCAGCCGTGGCGCTACACCGGCAATCGCCg > 8:106850/1‑149 (MQ=255) ggAAGGCGCCTTCGGTGCTGGAGGCGAAGATGCAGCGAGCGTGAGGCACCAGGTCGGCGACTTCATCCTGGCTGCCCAGGCCATTCTGCAACAGCAGCACTTCGGCGCTCTCGGCCAGCCGTGGCGCTACACCGGCGATTGCCggtgta < 1:277812/149‑5 (MQ=255) aaGGCGCCTTCGGTGCTGGAGGCGAAGATGCAGCGAGCGTGAGGCACCAGGTCGGCGACTTCATCCTGGCTGCCCAGGCCATTCTGCAACAGCAGCACTTCGGCGCTCTCGGCCAGCCGTGGCGCTGCCCCGGCGATTGCCGGTGTAGc < 5:171832/149‑1 (MQ=255) aaGGCGCCTTCGGTGCTGGAGGCGAAGATGCAGCGAGCGTGAGGCACCAGGTCGGCGACTTCATCCTGGCTGCCCAGGCCATTCTGCAACAGCAGCACTTCGGCGCTCTCGGCCAGCCGTGGCGCTACACCGGCAATCGCCGGGGCAGc < 3:100517/149‑1 (MQ=255) aaGGCGCCTTCGGTGCTGGAGGCGAAGATGCAGCGAGCGTGAGGCACCAGGTCGGCGACTTCATCCTGGCTGCCCAGGCCATTCTGCAACAGCAGCACTTCGGCGCTCTCGGCCAGCCGTGGCGCTACACCGGCAATCGCCGGGGCAGc > 7:115021/1‑149 (MQ=255) ggCGCCTTCGGTGCTGGAGGCGAAGATGCAGCGAGCGTGAGGCACCAGGTCGGCGACTTCATCGTGGCTGCCCAGGACATTCTGCAACAGCATCACTTCGGCGCTCTCGGCCAGCCGTGGCGCTGCCCCGGCGATTGCCGGTGTAGCgc < 4:199151/149‑2 (MQ=255) ggCGCCTTCGGTGCTGGAGGCGAAGATGCAGCGAGCGTGAGGCACCAGGTCGGCGACTTCATCCTGGCTGCCCAGGCCATTCTGCAACAGCAGCACTTCGGCGCTCTCGGCCAGCCGTGGCGCTACACCGGCAATCGCCGGGGCAGCGt > 1:141299/1‑149 (MQ=255) ggCGCCTTCGGTGCTGGAGGCGAAGATGCAGCGAGCGTGAGGCACCAGGTCGGCGACTTCATCCTGGCTGCCCAGGCCATTCTGCAACAGCAGCACTTCGGCGCTCTCGGCCAGCCGTGGCGCTACACCGGCAATCGCCGGGGCAGCGt < 6:291667/149‑1 (MQ=255) cgcCTTCGGTGCTGGAGGCGAAGATGCAGCGAGCGTGAGGCACCAGGTCGGCGACTTCATCCTGGCTGCCCAGGCCATTCTGCAACAGCAGCACTTCGGCGCTCTCGGCCAGCCGTGGCGCTACACCGGCAATCGCCGGGGCAGCGTCa > 4:281410/1‑149 (MQ=255) cTTCGGTGCTGGAGGCGAAGATGCAGCGAGCGTGAGGCACCAGGTCGGCGACTTCATCCTGGCTGCCCAGGCCATTCTGCAACAGCAGCAGTTCGGCGCTCTGGGCCAGCCGGGGCGCTACACCGGCAATCGCCGGGGCAGCGTCATAg < 5:178078/149‑1 (MQ=255) cTTCGGTGCTGGAGGCGAAGATGCAGCGAGCGTGAGGCACCAGGTCGGCGACTTCATCCTGGCTGCCCAGGCCATTCTGCAACAGCAGCACTTCGGCGCTCTCGGCCAGCCGTGGCGCTACACCGGCAATCGCCGGGGCAGCGTCATAg < 5:12986/149‑1 (MQ=255) cTTCGGTGCTGGAGGCGAAGATGCAGCGAGCGTGAGGCACCAGGTCGGCGACTTCATCCTGGCTGCCCAGGCCATTCTGCAACAGCAGCACTTCGGCGCTCTCGGCCAGCCGTGGCGCTACACCGGCAATCGCCGGGGCAGCGTCATAg < 3:145703/149‑1 (MQ=255) cTTCGGTGCTGGAGGCGAAGATGCAGCGAGCGTGAGGCACCAGGTCGGAGACTTCATCCTGGCTGCCCAGGCCATTCTGCAACAGCAGCACTTCGGCGCTCTCGGCCAGCCGTGGCGCTACACCGGCAATCGCCGGGGCAGCGTCATAg > 8:286969/1‑149 (MQ=255) ggTGCTGGAGGCGAAGATGCAGCGAGCGTGAGGCACCAGGTCGGCGACTTCATCCTGGCTGCCCAGGCCATTCTGCAACAGCAGCACTTCGGCGCTCTCGGCCAGCCGTGGCGCTACACCGGCAATCGCCGGGGCAGCGTCATAGGCCt < 7:286969/149‑1 (MQ=255) ggTGCTGGAGGCGAAGATGCAGCGAGCGTGAGGCACCAGGTCGGCGACTTCATCCTGGCTGCCCAGGCCATTCTGCAACAGCAGCACTTCGGCGCTCTCGGCCAGCCGTGGCGCTACACCGGCAATCGCCGGGGCAGCGTCATAGGCCt > 4:48912/1‑149 (MQ=255) ggTGCTGGAGGCGAAGATGCAGCGAGCGTGAGGCACCAGGTCGGCGACTTCATCCTGGCTGCCCAGGCCATTCTGCAACAGCAGCACTTCGGCGCTCTCGGCCAGCCGTGGCGCTACACCGGCAATCGCCGGGGCAGCGTCATAGGCCt < 7:12603/149‑1 (MQ=255) tGCTGGAGGCGAAGATGCAGCGAGCGTGAGGCACCAGGTCGGCGACTTCATCCTGGCTGCCCAGGCCATTCTGCAACAGCAGCACTTCGGCGCTCTCGGCCAGCCGTGGCGCTACACCGGCAATCGCCGGGGCAGCGTCATAGGCCTTg > 3:106506/1‑149 (MQ=255) tGGAGGCGAAGATGCAGCGAGCGTGAGGCACCAGGTCGGCGACTTCATCCTGGCTGCCCAGGCCATTCTGCAACAGCAGCACTTCGGCGCTCTCGGCCAGCCGTGGCGCTACACCGGCAATCGCCGGGGCAGCGTCATAGGCCTTGCAg > 3:17127/1‑149 (MQ=255) gAGGCGAAGATGCAGCGAGCGTGAGGCACCAGGTCGGCGACTTCATCCTGGCTGCCCAGGCCATTCTGCAACAGCAGCACTTCGGCGCTCTCGGCCAGCCGTGGCGCTACACCGGCAATCGCCGGGGCAGCGTCATAGGCCTTGCAg < 6:112273/147‑1 (MQ=255) ggCGAAGATGCAGCGAGCGTGAGGCACCAGGTCGGCGACTTCATCCTGGCTGCCCAGGCCATTCTGCAACAGCAGCACTTCGGCGCTCTCGGCCAGCCGTGGCGCTACACCGGCAATCGCCGGGGCAGCGTCATAGGCCTTGCAGGcca < 6:13811/149‑1 (MQ=255) cGAAGATGCAGCGAGCGTGAGGCACCAGGTCGGCGACTTCATCCTGGCTGCCCAGGCCATTCTGCAACAGCAGCACTTCGGCGCTCTCGGCCAGCCGTGGCGCTACACCGGCAATCGCCGGGGCAGCGTCATAGGCCTTGCAGGccacc < 8:258549/149‑1 (MQ=255) gAAGATGCAGCGAGCGTGAGGCACCAGGTCGGCGACTTCATCCTGGCTACCCAGGCCATTCTGCAACAGCAGCACTTCGGCGCTCTCGGCCAGCCGTGGCGCTACACCGGCAATCGCCGGGGCAGCGTCATAGGCCTTGCAGGccac > 4:127979/1‑147 (MQ=255) aaGATGCAGCGAGCGTGAGGCACCAGGTCGGCGACTTCATCCTGGCTGCCCAGGCCATTCTGCAACAGCAGCACTTCGGCGCTCTCGGCCAGCCGTGGCGCTACACCGGCAATCGCCGGGGCAGCGTCATAGGCCTTGCAGGCCACcag < 6:257167/149‑1 (MQ=255) aGATGCAGCGAGCGTGAGGCACCAGGTCGGCGACTTCATCCTGGCTGCCCAGGCCATTCTGCAACAGCAGCACTTCGGCGCTCTCGGCCAGCCGTGGCGCTACACCGGCAATCGCCGGGGCAGCGTCATAGGCCTTGCAGGCCACcagc < 8:75975/149‑1 (MQ=255) gCAGCGAGCGTGAGGCACCAGGTCGGCGACTTCATCCTGGCTGCCCAGGCCATTCTGCAACAGCAGCACTTCGGCGCTCTCGGCCAGCCGTGGCGCTACACCGGCAATCGCCGGGGCAGCGTCATAGGCCTTGCAGGCCACCAGCAGcc > 2:138520/1‑149 (MQ=255) cAGCGAGCGTGAGGCACCAGGTCGGCGACTTCATCCTGGCTGCCCAGGCCATTCTGCAACAGCAGCACTTCGGCGCTCTCGGCCAGCCGTGGCGCTACACCGGCAATCGCCGGGGCAGCGTCATAGGCCTTGCAGGCCACCAGCAGCCg < 4:100025/149‑1 (MQ=255) agcgagcgTGAGGCACCAGGTCGGCGACTTCATCCTGGCTGCCCAGGCCATTCTGCAACAGCAGCACTTCGGCGCTCTCGGCCAGCCGTGGCGCTACACCGGCAATCGCCGGGGCAGCGTCATAGGCCTTGCAGGCCACCAGCAGCCgg < 8:287588/149‑1 (MQ=255) gcgagcgTGAGGCACCAGGTCGGCGACTTCATCCTGGCTGCCCAGGCCATTCTGCAACAGCAGCACTTCGGCGCTCTCGGCCAGCCGTGGCGCTACACCGGCAATCGCCGGGGCAGCGTCATAGGCCTTGCAGGCCACCAGCAGCCGGt < 3:48912/149‑1 (MQ=255) tGAGGCACCAGGTCGGCGACTTCATCCTGGCTGCCCAGGCCATTCTGCAACAGCAGCACTTCGGCGCTCTCGGCCAGCCGTGGCGCTACACCGGCAATCGCCGGGGCAGCGTCATAGGCCTTGCAGGCCACCAGCAGCCGGTGGATCgg > 6:188927/1‑149 (MQ=255) ggCACCAGGTCGGCGACTTCATCCTGGCTGCCCAGGCCATTCTGCAACAGCAGCACTTCGGCGCTCTCGGCCAGCCGTGGCGCTACACCGGCAATCGCCGGGGCAGCGTCATAGGCCTTGCAGGCCACCAGCAGCCGGTGGATCGGGcc < 4:106506/149‑1 (MQ=255) ggCACCAGGTCGGCGACTTCATCCTGGCTGCCCAGGCCATTCTGCAACAGCAGCACTTCGGCGCTCTCGGCCAGCCGTGGCGCTACACCGGCAATCGCCGGGGCAGCGTCATAGGCCTTGCAGGCCACCAGCAGCCGGTGGATCGGGcc > 2:249214/1‑149 (MQ=255) aCCAGGTCGGCGACTTCATCCTGGCTGCCCAGGCCATTCTGCAACAGCAGCACTTCGGCGCTCTCGGCCAGCCGTGGCGCTACACCGGCAATCGCCGGGGCAGCGTCATAGGCCTTGCAGGCCACCAGCAGCCGGTGGATCGGGCCTTg > 5:215529/1‑149 (MQ=255) ccAGGTCGGCGACTTCATCCTGGCTGCCCAGGCCATTCTGCAACAGCAGCACTTCGGCGCTCTCGGCCAGCCGTGGCGCTACACCGGCAATCGCCGGGGCAGCGTCATAGGCCTTGCAGGCCACCAGCAGCCGGTGGATCGGGCCTTgc < 5:188927/149‑1 (MQ=255) aGGTCGGCGACTTCATCCTGGCTGCCCAGGCCATTCTGCAACAGCAGCACTTCGGCGCTCTCGGCCAGCCGTGGCGCTACACCGGCAATCGCCGGGGCAGCGTCATAGGCCTTGCAGGCCACCAGCAGCCGGTGGATCGGGCCTTgcgc < 8:115021/149‑1 (MQ=255) gTCGGCGACTTCATCCTGGCTGCCCAGGCCATTCTGCAACAGCAGCACTTCGGCGCTCTCGGCCAGCCGTGGCGCTACACCGGCAATCGCCGGGGCAGCGTCATAGGCCTTGCAGGCCACCAGCAGCCGGTGGATCGGGCCTTGCGCtt < 3:281410/149‑1 (MQ=255) tCGGCGACTTCATCCTGGCTGCCCAGGCCATTCTGCAACAGCAGCACTTCGGCGCTCTCGGCCAGCCGTGGCGCTACACCGGCAATCGCCGGGGCAGCGTCATAGGCCTTGCAGGCCACCAGCAGCCGGTGGATCGGGCCTTGCGCTtg > 4:309425/1‑149 (MQ=255) ggCGACTTCATCCTGGCTGCCCAGGCCATTCTGCAACAGCAGCACTTCGGCGCTCTCGGCCAGCCGTGGCGCTACACCGGCAATCGCCGGGGCAGCGTCATAGGCCTTGCAGGCCACCAGCAGCCGGTGGATCGGGCCTTGCGCTtgt < 1:138520/148‑1 (MQ=255) ggCGACTTCATCCTGGCTGCCCAGGCCATTCTGCAACAGCAGCACTTCGGCGCTCTCGGCCAGCCGTGGCGCTACACCGGCAATCGCCGGGGCAGCGTCATAGGCCTTGCAGGCCACCAGCAGCCGGTGGATCGGGCCTTGCGCTtgt < 7:201165/148‑1 (MQ=255) gACTTCATCCTGGCTGCCCAGGCCATTCTGCAACAGCAGCACTTCGGCGCTCTCGGCCAGCCGTGGCGCTACACCGGCAATCGCCGGGGCAGCGTCATAGGCCTTGCAGGCCACCAGCAGCCGGTGGATCGGGCCTTGCGCTTGTGCCg > 1:280814/1‑149 (MQ=255) ttCATCCTGGCTGCCCAGGCCATTCTGCAACAGCAGCACTTCGGCGCTCTCGGCCAGCCGTGGCGCTACACCGGCAATCGCCGGGGCAGCGTCATAGGCCTTGCAGGCCACCAGCAGCCGGTGGATCGGGCCTTGCGCTTGTGCCGttt > 2:99979/1‑149 (MQ=255) aTCCTGGCTGCCCAGGCCATTCTGCAACAGCAGCACTTCGGCGCTCTCGGCCAGCCGTGGCGCTACACCGGCAATTGCCGGGGCAGCGTCATAGGCCTTGCAGGCCACCAGCAGCCGGTGGATCGGGCCTTGCGCTTGTGCCGTTTCg < 8:138913/148‑1 (MQ=255) gCTGCCCAGGCCATTCTGCAACAGCAGCACTTCGGCGCTCTCGGCCAGCCGTGGCGCTACACCGGCAATCGCCGGGGCAGCGTCATAGGCCTTGCAGGCCACCAGCAGCCGGTGGATCGGGCCTTGCGCTTGTGCCGTTTCGGCCgg < 6:102038/147‑1 (MQ=255) cccAGGCCATCCTGCAACAGCAGCACTTCGGCGCTCTCGGCCAGCCGTGGCGCTACACCGGCAATCGCCGGGGCAGCGTCATAGGCCTTGCAGGCCACCAGCAGCCGGTGGATCGGGCCTTGCGCTTGTGCCGTTTCGGCCGGTATg < 1:55205/147‑1 (MQ=255) cAGGCCATTCTGCAACAGCAGCACTTCGGCGCTCTCGGCCAGCCGTGGCGCTACACCGGCAATCGCCGGGGCAGCGTCATAGGCCTTGCAGGCCACCAGCAGCCGGTGGATCGGGCCTTGCGCTTGTGCCGTTTCGGCCGGTATGGCg > 5:145384/1‑148 (MQ=255) cAGGCCATTCTGCAACAGCAGCACTTCGGCGCTCTCGGCCAGCCGTGGCGCTACACCGGCAATCGCCGGGGCAGCGTCATAGGCCTTGCAGGCCACCAGCAGCCGGTGGATCGGGCCTTGCGCTTGTGCCGTTTCGGCCGGTATGGCg > 4:61719/1‑148 (MQ=255) aGGCCATTCTGCAACAGCAGCACTTCGGCGCTCTCGGCCAGCCGTGGCGCTACACCGGCAATCGCCGGGGCAGCGTCATAGGCCTTGCAGGCCACCAGCAGCCGGTGGATCGGGCCTTGCGCTTGTGCCGTTTCGGCCGGTATGGCGTa < 3:211502/149‑1 (MQ=255) cATTCTGCAACAGCAGCACTTCGGCGCTCTCGGCCAGCCGTGGCGCTACACCGGCAATCGCCGGGGCAGCGTCATAGGCCTTGCAGGCCACCAGCAGCCGGTGGATCGGGCCTTGCGCTTGTGCCGTTTCGGCCGGTATGGCGTAgcgc > 7:96470/1‑149 (MQ=255) cATTCTGCAACAGCAGCACTTCGGCGCTCTCGGCCAGCCGTGGCGCTACACCGGCAATCGCCGGGGCAGCGTCATAGGCCTTGCAGGCCACCAGCAGCCGGTGGATCGGGCCTTGCGCTTGTGCCGTTTCGGCCGGTATGGCGTAgcgc > 4:287909/1‑149 (MQ=255) cAACAGCAGCACTTCGGCGCTCTCGGCCAGCCGTGGCGCTACACCGGCAATCGCCGGGGCAGCGTCATAGGCCTTGCAGGCCACCAGCAGCCGGTGGATCGGGCCTTGCGCTTGTGCCGTTTCGGCCGGTATGGCGTAGCGCCGGGtt < 4:17127/148‑1 (MQ=255) cAACAGCAGCACTTCGGCGCTCTCGGCCAGCCGTGGCGCTACACCGGCAATCGCCGGGGCAGCGTCATAGGCCTTGCAGGCCACCAGCAGCCGGTGGATCGGGCCTTGCGCTTGTGCCGTTTCGGCCGGTATGGCGTAGCGCCGGGtt < 4:118765/148‑1 (MQ=255) cAACAGCAGCACTTCGGCGCTCTCGGCCAGCCGGGGCGCTACACCGGCAATCGCAGGGGCAGCGTCATAGGCCTTGCAGGCCACCAGCAGCCGGTGGATCGGTCCTTGCGCTTGTGCCGTTTCGGCCGGTATGGCGTAGCGCCGGGttt < 2:308539/149‑1 (MQ=255) aaCAGCAGCACTTCGGCGCTCTCGGCCAGCCGTGGCGCTACACCGGCAATCGCCGGGGCAGCGTCATAGGCCTTGCAGGCCACCAGCAGCCGGTGGATCGGGCCTTGCGCTTGTGCCGTTTCGGCCGGTATGGCGTAGCGCCGGGTTTg < 1:249214/149‑1 (MQ=255) aCAGCAGCACTTCGGCGCTCTCGGCCAGCCGTGGCGCTACACCGGCAATCGCCGGGGCAGCGTCATAGGCCTTGCAGGCCACCAGCAGCCGGTGGATCGGGCCTTGCGCTTGTGCCGTTTCGGCCGGTATGGCGTAGCGCCGGGTTTgg > 2:290394/1‑149 (MQ=255) agcagcACTTCGGCGCTCTCGGCCAGCCGTGGCGCTACACCGGCAATCGCCGGGGCAGCGTCATAGGCCTTGCAGGCCACCAGCAGCCGGTGGATCGGGCCTTGCGCTTGTGCCGTTTCGGCCGGTATGGCGTAGCGCCGGGTTTGGTc < 1:267706/149‑1 (MQ=255) agcagcACTTCGGCGCTCTCGGCCAGCCGTGGCGCTACACCGGCAATCGCCGGGGCAGCGTCATAGGCCTTGCAGGCCACCAGCAGCCGGTGGATCGGGCCTTGCGCTTGTGCCGTTTCGGCCGGTATGGCGTAGCGCCGGGTTTGGTc < 3:287909/149‑1 (MQ=255) gcagcaCTTCGGCGCTCTCGGCCAGCCGTGGCGCTACACCGGCAATCGCCGGGGCAGCGTCATAGGCCTTGCAGGCCACCAGCAGCCGGTGGATCGGGCCTTGCGCTTGTGCCGTTTCGGCCGGTATGGCGTAGCGCCGGGTTTGGTcc < 7:111485/149‑1 (MQ=255) gcagcaCTTCGGCGCTCTCGGCCAGCCGTGGCGCTACACCGGCAATCGCCGGGGCAGCGTCATAGGCCTTGCAGGCCACCAGCAGCCGGTGGATCGGGCCTTGCGCTTGTGCCGTTTCGGCCGGTATGGCGTAGCGCCGGGTTTGGTcc < 7:106850/149‑1 (MQ=255) agcaCTTCGGCGCTCTCGGCCAGCCGTGGCGCTACACCGGCAATCGCCGGGGCAGCGTCATAGGCCTTGCAGGCCACCAGCAGCCGGTGGATCGGGCCTTGCGCTTGTGCCGTTTCGGCCGGTACGGCGTAGCGCCGGGTTTGGTCCTg > 8:93278/1‑149 (MQ=255) aCTTCGGCGCTCTCGGCCAGCCGTGGCGCTACACCGGCAATCGCCGGGGCAGCGTCATAGGCCTTGCAGGCCACCAGCAGCCGGTGGATCGGGCCTTGCGCTTGTGCCGTTTCGGCCGGTATGGCGTAGCGCCGGGTTTGGTCCTGCTc < 2:141299/149‑1 (MQ=255) ttCGGCGCTCTCGGCCAGCCGTGGCGCTACACCGGCAATCGCCGGGGCAGCGTCATAGGCCTTGCAGGCCACCAGCAGCCGGTGGATCGGGCCTTGCGCTTGTGCCGTTTCGGCCGGTATGGCGTAGCGCCGGGTTTGGTCCTGCTCGa > 7:106153/1‑149 (MQ=255) cGGCGCTCTCGGCCAGCCGTGGCGCTACACCGGCAATCGCCGGGGCAGCGTCATAGGCCTTGCAGGCCACCAGCAGCCGGTGGATCGGGCCTTGCGCTTGTGCCGTTTCGGCCGGTATGGCGTAGCGCCGGGTTTGGTCCTGCTCGAc > 7:68816/1‑148 (MQ=255) gcgcTCTCGGCCAGCCGTGGCGCTACACCGGCAATCGCCGGGGCAGCGTCATAGGCCTTGCAGGCCACCAGCAGCCGGTGGATCGGGCCTTGCGCTTGTGCCGTTTCGGCCGGTATGGCGTAGCGCCGGGTTTGGTCCTGCTCGACCAg > 2:188617/1‑149 (MQ=255) ctctCGGCCAGCCGTGGCGCTACACCGGCAATCGCCGGGGCAGCGTCATAGGCCTTGCAGGCCACCAGCAGCCGGTGGATCGGGCCTTGCGCTTGTGCCGTTTCGGCCGGTATGGCGTAGCGCCGGGTTTGGTCCTGCTCGACCAGGGt > 6:328681/1‑149 (MQ=255) ctcGGCCAGCCGTGGCGCTACACCGGCAATCGCCGGGGCAGCGTCATAGGCCTTGCAGGCCACCAGCAGCCGGTGGATCGGGCCTTGCGCTTGTGCCGTTTCGGCCGGTATGGCGTAGCGCCGGGTTTGGTCCTGCTCGACCAGGGt > 8:25170/1‑147 (MQ=255) tcGGCCAGCCGTGGCGCTACACCGGCAATCGCCGGGGCAGCGTCATAGGCCTTGCAGGCCACCAGCAGCCGGTGGATCGGGCCTTGCGCTTGTGCCGTTTCGGCCGGTATGGCGTAGCGCCGGGTTTGGTCCTGCTCGACCAGGGTCAg > 6:231339/1‑149 (MQ=255) ggCCAGCCGTGGCGCTACACCGGCAATCGCCGGGGCAGCGTCATAGGCCTTGCAGGCCACCAGCAGCCGGTGGATCGGGCCTTGCGCTTGTGCCGTTTCGGCCGGTATGGCGTAGCGCCGGGTTTGGTCCTGCTCGACCAGGGTCa < 3:309425/146‑1 (MQ=255) gCCAGCCGTGGCGCTACACCGGCAATCGCCGGGGCAGCGTCATAGGCCTTGCAGGCCACCAGCAGCCGGTGGATCGGGCCTTGCGCTTGTGCCGTTTCGGCCGGTATGGCGTAGCGCCgg < 4:272735/120‑1 (MQ=255) gCCAGCCGTGGCGCTACACCGGCAATCGCCGGGGCAGCGTCATAGGCCTTGCAGGCCACCAGCAGCCGGTGGATCGGGCCTTGCGCTTGTGCCGTTTCGGCCGGTATGGCGTAGCGCCgg > 3:272735/1‑120 (MQ=255) gCCAGCCGTGGCGCTACACCGGCAATCGCCGGGGCAGCGTCATAGGCCTTGCAGGCCACCAGCAGCCGGTGGATCGGGCCTTGCGCTTGTGCCGTTTCGGCCGGTATGGCGTAGCGCCGGGTTTGGTCCTGCTCGACCAGGGTCAGGcc < 1:188617/149‑1 (MQ=255) aGCCGTGGCGCTACACCGGCAATCGCCGGGGCAGCGTCATAGGCCTTGCAGGCCACCAGCAGCCGGTGGATCGGGCCTTGCGCTTGTGCCGTTTCGGCCGGTATGGCGTAGCGCCGGGTTTGGTCCTGCTCGACCAGGGTCAGGCCAcc > 6:127126/1‑149 (MQ=255) aGCCGTGGCGCTACACCGGCAATCGCCGGGGCAGCGTCATAGGCCTTGCAGGCCACCAGCAGCCGGTGGATCGGGCCTTGCGCTTGTGCCGTTTCGGCCGGTATGGCGTAGCGCCGGGTTTGGTCCTGCTCGACCAGGGTCAGGCCAcc > 3:63635/1‑149 (MQ=255) gCCGTGGCGCTACACCGGCAATCGCCGGGGCAGCGTCATAGGCCTTGCAGGCCACCAGCAGCCGGTGGATCGGGCCTTGCGCTTGTGCCGTTTCGGCCGGTATGGCGTAGCGCCGGGTTTGGTCCTGCTCGACCAGGGTCAGGCCACCg < 2:280814/149‑1 (MQ=255) ccGTGGCGCTACACCGGCAATCGCCGGGGCAGCGTCATAGGCCTTGCAGGCCACCAGCAGCCGGTGGATCGGGCCTTGCGCTTGTGCCGTTTCGGCCGGTATGGCGTAGCGCCGGGTTTGGTCCTGCTCGACCAGGGTCAGGCCACCgg > 4:280259/1‑149 (MQ=255) tatgacgcTGCCCCGGCGATTGCCGGTGTAGCGTCATAGGCCTTGCAGGCCACCAGCAGCCGGTGGATCGGGCCTTGCGCTTGTGCCGTTTCGGCCGGTATGGCGTAGCGCCGGGTTTGGTCCTGCTCGACCAGGGTCAGGCCACCGGc > 6:296665/6‑149 (MQ=255) tatgacgcTGCCCCGGCGATTGCCGGGGCAGCGTCATAGGCCTTGCAGGCCACCAGCAGCCGGTGGATCGGGCCTTGCGCTTGTGCCGTTTCGGCCGGTATGGCGTAGCGCCGGGTTTGGTCCTGCTCGACCAGGGTCAGGCCACCGGc > 4:262323/6‑149 (MQ=255) gcTACACCGGCAATCGCCGGGGCAGCGTCATAGGCCTTGCAGGCCACCAGCAGCCGGTGGATCGGGCCTTGCGCTTGTGCCGTTTCGGCCGGTATGGCGTAGCGCCGGGTTTGGTCCTGCTCGACCAGGGTCAGGCCACCGGCctgct > 1:177536/1‑148 (MQ=255) ccccGGCGATTGCCGGGGCAGCGTCATAGGCCTTGCAGGCCACCAGCAGCCGGTGGATCGGGCCTTGCGCTTGTGCCGTTTCGGCCGGTATGGCGTAGCGCCGGGTTTGGTCCTGCTCGACCAGGGTCAGGCCACCGGCCTGCTGAt < 3:262323/145‑1 (MQ=255) cacCGGCAATCGCCGGGGCAGCGTCATAGGCCTTGCAGGCCACCAGCAGCCGGTGGATCGGGCCTTGCGCTTGTGCCGTTTCGTCCTGTATGGCGTAGCGCCGGGTTTGGTCCTGCTCGACCATGGTCAGGCCACCGGCCTGCTGAt < 7:47502/147‑1 (MQ=255) cacCGGCAATCGCCGGGGCAGCGTCATAGGCCTTGCAGGCCACCAGCAGCCGGTGGATCGGGCCTTGCGCTTGTGCCGTTTCGGCCGGTATGGCGTAGCGCCGGGTTTGGTCCTGCTCGACCAGGGTCAGGCCACCGGCCTGCTGATa < 6:145384/148‑1 (MQ=255) cacCGGCAATCGCCGGGGCAGCGTCATAGGCCTTGCAGGCCACCAGCAGCCGGTGGATCGGGCCTTGCGCTTGTGCCGTTTCGGCCGGTATGGCGTAGCGCCGGGTTTGGTCCTGCTCGACCAGGGTCAGGCCACCGGCCTGCTGATAg < 5:328681/149‑1 (MQ=255) ccGGCAATCGCCGGGGCAGCGTCATAGGCCTTGCAGGCCACCAGCAGCCGGTGGATCGGGCCTTGCGCTTGTGCCGTTTCGGCCGGTATGGCGTAGCGCCGGGTTTGGTCCTGCTCGACCAGGGTCAGGCCACCGGCCTGCTGATAGGc > 4:126687/1‑149 (MQ=255) gCAATCGCCGGGGCAGCGTCATAGGCCTTGCAGGCCACCAGCAGCCGGTGGATCGGGCCTTGCGCTTGTGCCGTTTCGGCCGGTATGGCGTAGCGCCGGGTTTGGTCCTGCTCGACCAGGGTCAGGCCACCGGCCTGCTGATAGGCCTg < 3:197989/149‑1 (MQ=255) | CCCCTCGCGGAAGGCGCCTTCGGTGCTGGAGGCGAAGATGCAGCGAGCGTGAGGCACCAGGTCGGCGACTTCATCCTGGCTGCCCAGGCCATTCTGCAACAGCAGCACTTCGGCGCTCTCGGCCAGCCGTGGCGCTACACCGGCAATCGCCGGGGCAGCGTCATAGGCCTTGCAGGCCACCAGCAGCCGGTGGATCGGGCCTTGCGCTTGTGCCGTTTCGGCCGGTATGGCGTAGCGCCGGGTTTGGTCCTGCTCGACCAGGGTCAGGCCACCGGCCTGCTGATAGGCCTG > NC_002947/1541120‑1541410 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |