| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,748,925 | T→A | 7.4% | intergenic (‑258/‑74) | PP_1548 ← / → PP_5744 | hypothetical protein/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,748,925 | 0 | T | A | 7.4% | 186.9 / 3.2 | 63 | intergenic (‑258/‑74) | PP_1548/PP_5744 | hypothetical protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (30/28); new base A (2/3); total (32/31) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.72e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.23e-01 | |||||||||||
GCTACGTTGCGTAACGTCCACCAGAACTCAATCGCCGGATTAACTCGGCGCCTGGTGGCTCATCTGCTGGTTTTTAAAGAGCGGTGGCTGCCGGAGCTGCCAGCTCGATGCAAATGCAAGCGAACTTGCATTTATAAAAGCAT‑GCTTG‑TTTTTTAAATGCAAGCACGCTTGTGTAATTTTCTCTTACTGTATGGATGTCCAGTGTGTAGGAGCTTTCGGATGTCGGCGCAGGAAAGAGCAGTTCGTATGGAAGAGCTAACGAGCCTTGAGCGGCTGGGCTTGAGGG > NC_002947/1748780‑1749065 | gCTACGTTGCGTAACGTCCACCAGAACTCAATCGCCGGATTAACTCGGCGCCTGGTGGCTCATCTGCTGGTTTTTAAAGAGCGGTGGCTGTCGGAGCTGCCAGCTCGATGCAAATGCAAGCGAACTTGCATTTATAAAAGCAT‑GCTTG‑t > 5:272733/1‑149 (MQ=255)gCTACGTTGCGTAACGTCCACCAGAACTCAATCGCCGGATTAACTCGGCGCCTGGTGGCTCATCTGCTGGTTTTTAAAGAGCGGTGGCTGCCGGAGCTGCCAGCTCGATGCAAATGCAAGCGAACTTGCATTTATAAAAGCAT‑GCTTG‑t > 7:159888/1‑149 (MQ=255) tACGTTGCGTAACGTCCACCAGAACTCAATCGCCGGATTAACTCGGCGCCTGGTGGCTCATCTGCTGGTTTTTAAAGAGCGGTGGCTGCCGGAGCTGCCAGCTCGATGCAAATGCAAGCGAACTTGCATTTATAAAAGCAT‑GCTTG‑ttt > 6:109525/1‑149 (MQ=255) tAACGTCCACCAGAACTCAATCGCCGGATTAACTCGGCGCCTGGTGGCTCATCTGCTGGTTTTTAAAGAGCGGTGGCTGCCGGAGCTGCCAGCTCGATGCAAATGCAAGCGAACTTGCATTTATAAAAGCAT‑GCTTG‑TTTTTTAAATg > 1:286404/1‑148 (MQ=255) tAACGTCCACCAGAACTCAATCGCCGGATTAACTCGGCGCCTGGTGGCTCATCTGCTGGTTTTTAAAGAGCGGTGGCTGCCGGAGCTGCCAGCTCGATGCAAATGCAAGCGAACTTGCATTTATAAAAGCAT‑GCTTG‑TTTTTTAAATg < 2:286404/148‑1 (MQ=255) aaCGTCCACCAGAACTCAATCGCCGGATTAACTCGGCGCCTGGTGGCTCATCTGCTGGTTTTTAAAGAGCGGTGGCTGCCGGAGCTGCCAGCTCGATGCAAATGCAAGCGAACTTGCATTTATAAAAGCAT‑GCTTG‑TTTTTTAAATGc > 2:297202/1‑148 (MQ=255) aCGTCCCCCAGAACTCAATCGCCGGATTAACTCGGCGCCTGGTGGCTCATCTGCTGGTGTTTAAAGCGCGGTGGCTGCCGGAGCTGCCAGCTCGATGCAAATGCAAGCGAACTTGCATTTATAAAAGCAT‑GCTTG‑TTTTTTAAATGc > 5:230536/1‑147 (MQ=255) aCGTCCACCAGAACTCAATCGCCGGATTAACTCGGCGCCTGGTGGCTCATCTGCTGGTTTTTAAAGAGCGGTGGCTGCCGGGGCTGCCAGCTCGATGCAAATGCAAGCGAACTTGCATTTATAAAAGCAT‑GCTTG‑TTTTTTAAATGCaa < 5:307114/149‑1 (MQ=255) aCGTCCACCAGAACTCAATCGCCGGATTAACTCGGCGCCTGGTGGCTCATCTGCTGGTTTTTAAAGAGCGGTGGCTGCCGGAGCTGCCAGCTCGATGCAAATGCAAGCGAACTTGCATTTATAAAAGCAT‑GCTTG‑TTTTTTAAATGCaa < 2:275554/149‑1 (MQ=255) gTCCACCAGAACTCAATCGCCGGATTAACTCGGCGCCTGGTGGCTAATCTGCTGGTTTTTAAAGAGCGGTGGCTGCCGGAGCTGCCAGCTCGATGCAAATGCAAACGAACTAGCATTTATAAAAGCAT‑GAATG‑TTTTTTAAAAGCAAg > 4:299594/1‑148 (MQ=37) caGAACTCAATCGCCGGATTAACTCGGCGCCTGGTGGCTCATCTGCTGGTTTTTAAAGAGCGGTGGCTGCCGGAGCTGCCAGCTCGATGCAAATGCAAGCGTGCTTGCATTTA‑AAAAACAA‑GCATGCTTTTATAAATGCAAGTTCGCtt < 5:221018/149‑1 (MQ=25) gAAGTCAATCGCCGGATTAACTCGTCGCCTGGTGGCTCATCTGCTGTTTTTTAAAGAGCGGTGGCTGCCGGAGCTGCCAGCTCGATGCAAATGCAAGCTAACTTGCATTTATAAAAGCAT‑GCTTG‑TTTTTTAAATGCAAGCACGCTtgt < 3:299594/149‑1 (MQ=255) aCTCAATCGCCGGATTAACTCGGCGCCTGGTGGCTCATCTGCTGGTTTTTAAAGATCGGTGGCTGCCGGAGCTGCCAGCTCGATGCAAATGCAAGCGTGCTTGCATTTA‑AAAAACAA‑GCATGCTTTTATAAATGCAAGTTCGCTtgcat < 6:167323/149‑4 (MQ=21) tCAATCGCCGGATTAACTCGGCGCCTGGTGGCTCATCTGCTGGTTTTTAAAGAGCGGTGGCTGCCGGAGCTGCCAGCTCGATGCAAATGCAAGCGAACTTGCATTTATAAAAGCAT‑GCTTG‑TTTTTTAAATGCAAGCACGCTTGTGTaa > 8:280292/1‑149 (MQ=255) ccGGATTAACTCGGCGCCTGGTGGCTCATCTGCTGGTTTTTAAAGAGCGGTGGCTGCCGGAGCTGCCAGCTCGATGCAAATGCAAGCGAACTTGCATTTATAAAAGCAT‑GCTTG‑TTTTTTAAATGCAAGCACGCTTGTGTAATTTtctc < 8:159888/149‑1 (MQ=255) ccGGATTAACTCGGCGCCTGGTGGCTCATCTGCTGGTTTTTAAAGAGCGGTGGCTGCCGGAGCTGCCAGCTCGATGCAAATGCAAGCGAACTTGCATTTATAAAAGCAT‑GCTTG‑TTTTTTAAATGCAAGCACGCTTGTGTAATTTtctc > 6:297406/1‑149 (MQ=255) gATTAACTCGGCGCCTGGTGGCTCATCTGCTGGTTTTTAAAGAGCGGTGGCTGCCGGAGCTGCCAGCTCGATGCAAATGCAAGCGAACTTGCATTTATAAAAGCAT‑GCTTG‑TTTTTTAAATGCAAGCACGCTTGTGTAATTTTCTCTTa < 1:233335/149‑1 (MQ=255) ttAACTCGGCGCCTGGTGGCTCATCTGCTGGTTTTTAAAGAGCGGTGGCTGCCGGAGCTGCCAGCTCGATGCAAATGCAAGCGAACTTGCATTTATAAAAGCAT‑GCTTG‑TTTTTTAAATGCAAGCACGCTTGTGTAATTTTCTCTTACt > 7:116113/1‑149 (MQ=255) aCTCGGCGCCTGGTGGCTCATCTGCTGGTTTTTAAAGAGCGGTGGCTGCCGGAGCTGCCAGCTCGATGCAAATGCAAGCGTGCTTGCATTTA‑AAAAACAA‑GCATGCTTTTATAAATGCAAGTTCGCTtgca < 6:133968/131‑3 (MQ=18) aCTCGGCGCCTGGTGGCTCATCTGCTGGTTTTTAAAGAGCGGTGGCTGCCGGAGCTGCCAGCTCGATGCAAATGCAAGCGTGCTTGCATTTA‑AAAAACAA‑GCATGCTTTTATAAATGCAAGTTCGCTtgca > 5:133968/1‑129 (MQ=18) aCTCGGCGCCTGGTGGCTCATCTGCTGGTTTTTAAAGAGCGGTGGCTGCCGGAGCTGCCAGCTCGATGCAAATGCAAGCGAACTTGCATTTATAAAAGCAT‑GCTTG‑TTTTTTAAATGCAAGCTCGCTTGTGTAATTTTCTCTTACTGTa > 6:142336/1‑149 (MQ=255) tCGGCGCCTGGTGGCTCATCTGCTGGTTTTTAAAGAGCGGTGGCTGCCGGAGCTGCCAGCTCGATGCAAATGCAAGCGAACTTGCATTTATAAAAGCAT‑GCTTG‑TTTTTTAAATGCAAGCACGCTTGTGTAATTTTCTCTTACTGTATg > 3:271337/1‑149 (MQ=255) tCGGCGCCTGGTGGCTCATCTGCTGGTTTTTAAAGAGCGGTGGCTGCCGGAGCTGCCAGCTCGATGCAAATGCAAGCGAACTTGCATTTATAAAAGCAT‑GCTTG‑TTTTTTAAATGCAAGCACGCTTGTGTAATTTTCTCTTACTGTATg > 1:161262/1‑149 (MQ=255) ggCGCCTGGTGGCTCATCTGCTGGTTTTTAAAGAGCGGTGGCTGCCGGAGCTTCCAGCTCGATGCAAATGCAAGCGAACTTGCATTTATAAAAGCATCGCTTG‑TTTTTTAAATGCAAGCACGCTTGTGTAATTTTCTCTTACTGTAt < 1:240294/147‑1 (MQ=255) cTCATCTGCTGGTTTTTAAAGAGCGGTGGCTGTCGGAGCTGCCAGCTCGATGCAAATGCAAGCGAACTTGCATTTATAAAAGCAT‑GCTTG‑TTTTTTAAATGCAAGCACGCTTGTGTAATTTTCTCTTACTGTATGGATGTCCAgtgtgt < 6:272733/149‑1 (MQ=255) aTCTGCTGGTTTTTAAAGAGCGGTGGCTGCCGGAGCTGCCAGCTCGATGCAAATGCAAGCGAACTTGCATTTATAAAAGCAT‑GCTTG‑TTTTTTAAATGCAAGCACGCTTGTGTAATTTTCTCTTACTGTATGGATGTCCAGTGTGTa < 7:280292/147‑1 (MQ=255) gctgGTTTTTAAAGAGCGGTGGCTGCCGGAGCTGCCAGCTCGATGCAAATGTAAGCGAACTTGCATTTATAAAAGCAT‑GCTTG‑TTTTTTAAATGCAAGCACGCTTGTGTAATTTTCTCTTACTGTATGGATGTCCAGTGTGTAGGAGCt > 8:132780/1‑149 (MQ=255) ctgGTTTTTAAAGAGCGGTGGCTGCCGGAGCTGCCAGCTCGATGCAAATGCAAGCGAACTTGCATTTATAAAAGCAT‑GCTTG‑TTTTTTAAATGCAAGCACGCTTGTGTAATTTTCTCTTACTGTATGGATGTCCAGTGTGTAGGa < 4:271337/145‑1 (MQ=255) ctgGTTTTTAAAGAGCGGTGGCTGCCGGAGCTGCCAGCTCGATGCAAATGCAAGCGAACTTGCATTTATAAAAGCAT‑GCTTG‑TTTTTTAAATGCAAGCACGCTTGTGTAATTTTCTCTTACTGTATGGATGTCCAGTGTGTAGGa < 2:198190/145‑1 (MQ=255) tgGTTTTTAAAGAGCGGTGGCTGCCGGAGCTGCCAGCTCGATGCAAATGCAAGCGAACTTGCATTTATAAAAGCAT‑GCTTG‑TTTTTTAAATGCAAGCACGCTTGTGTAATTTTCTCTTACTGTATGGATGTCCAGTGTGTAGGAGCttt > 2:313334/1‑149 (MQ=255) gTTTTTAAAGAGCGGTGGCTGCCGGAGCTGCCAGCTCGATGCAAATGCAAGCGAACTTGCATTTATAAAAGCAT‑GCTTG‑TTTTTTAAATGCAAGCACGCTTGTGTAATTTTCTCTTACTGTATGGATGTCCAGTGTGTAGGAGCTTTCg < 5:109525/149‑1 (MQ=255) gTTTTTAAAGAGCGGTGGCTGCCGGAGCTGCCAGCTCGATGCAAATGCAAGCGAACTTGCATTTATAAAAGCAT‑GCTTG‑TTTTTTAAATGCAAGCACGCTTGTGTAATTTTCTCTTACTGTATGGATGTCCAGTGTGTAGGAGCTTTCg > 8:140428/1‑149 (MQ=255) tttAAAGAGCGGTGGCTGCCGGAGCTGCCAGCTCGATGCAAATGCAAGCGAACTTGCATTTATAAAAGCAT‑GCTTG‑TTTTTTAAATGCAAGCACGCTTGTGTAATTTTCTCTTACTGTATGGATGTCCAGTGTGTAGGAGCTTTCGGa < 7:112074/148‑1 (MQ=255) tGGCTGCCGGAGCTGCCAGCTCGATGCAAATGCAAGCGAACTTGCATTTATAAAAGCAT‑GCTTG‑TTTTTTAAATGCAAGCACGCTTGTGTAATTTTCTCTTACTGTATGGATGTCCAGTGTGTAGGAGCTTTCGGATGTCGGCGCAgg > 2:66202/1‑148 (MQ=255) gCCGGAGCTGCCAGCTCGATGCAAATGCAAGCGAACTTGCATTTATAAAAGCAT‑GCTTG‑TTTTTTAAATGCAAGCACGCTTGTGTAATTTTCTCTTACTGTATGGATGTCCAGTGTGTAGGAGCTTTCGGATGTCGGCGCAGGAAagag < 6:230536/149‑1 (MQ=255) ccAGCTCGATGCAAATGCAAGCGAACTTGCATTTATAAAAGCAT‑GCTTG‑TTTTTTAAATGCAAGCACGCTTGTGTAATTTTCTCTTACTGTATGGATGTCCAGTGTGTAGGAGCTTTCGGATGTCGGCGCAGGAAAGAGCAGTTCGTa < 3:209397/148‑1 (MQ=255) ccAGCTCGATGCAAATGCAAGCGAACTTGCATTTATAAAAGCAT‑GCTTG‑TTTTTTAAATGCAAGCACGCTTGTGTAATTTTCTCTTACTGTATGGATGTCCAGTGTGTAGGAGCTTTCGGATGTCGGCGCAGGAAAGAGCAGTTCGTAt > 4:288188/1‑149 (MQ=255) aGCTCGATGCAAATGCAAGCGAACTTGCATTTATAAAAGCAT‑GCTTG‑TTTTTTAAATGCAAGCACGCTTGTGTAATTTTCTCTTACTGTATGGATGTCCAGTGTGTAGGAGCTTTCGGATGTCGGCGCAGGAAAGAGCAGTTCGTATg > 5:247392/1‑148 (MQ=255) cTCGATGCAAATGCAAGCGAACTTGCATTTATAAAAGCAT‑GCTTG‑TTTTTTAAATGCAAGCACGCTTGTGTAATTTTCTCTTACTGTATGGATGTCCAGTGTGTAGGAGCTTTCGGATGTCGGCGCAGGAAAGAGCAGTTCGTATGGaa < 7:140428/149‑1 (MQ=255) gATGCAAATGCAAGCGAACTTGCATTTATAAAAGCAT‑GCTTG‑TTTTTTAAATGCAAGCACGCTTGTGTAATTTTCTCTTACTGTATGGATGTCCAGTGTGTAGGAGCTTTCGGATGTCGGCGCAGGAAAGAGCAGTTCGTATGGAagag > 7:222541/1‑149 (MQ=255) gATGCAAATGCAAGCGAACTTGCATTTATAAAAGCAT‑GCTTG‑TTTTTTAAATGCAAGCACGCTTGTGTAATTTTCTCTTACTGTATGGATGTCCAGTGTGTAGGAGCTTTCGGATGTCGGCGCAGGAAAGAGCAGTTCGTATGGAaga < 3:288188/148‑1 (MQ=255) aatgcaaGCGAACTTGCATTTATAAAAGCAT‑GCTTG‑TTTTTTAAATGCAAGCACGCTTGTGTAATTTTCTCTTACTGTATGGATGTCCAGTGTGTAGGAGCTTTCGGATGTCGGCGCAGGAAAGAGCAGTTCGTATGGAAGAGCTAAc > 5:280518/1‑148 (MQ=255) tgcaaGCGAACTTGCATTTATAAAAGCAT‑GCTTG‑TTTTTTAAATGCAAGCACGCTTGTGTAATTTTCTCTTACTGTATGGATGTCCAGTGTGTAGGAGCTTTCGGATGTCGGCGCAGGAAAGAGCAGTTCGTATGGAAGAGCTAACGAg > 6:81033/1‑149 (MQ=255) cGAACTTGCATTTATAAAAGCAT‑GCTTG‑TTTTTTAAATGCAAGCTCGCTTGTGTAATTTTCTCTTACTGTATGGATGTCCAGTGTGTAGGAGCTTTCGGATGTCGGCGCAGGAAAGAGCAGTTCGTATGGAAGAGCTAACGAGCCTTGa < 5:142336/149‑1 (MQ=255) gAACTTGCATTTATAAAAGCAT‑GCTTG‑TTTTTTAAATGCAAGCACGCTTGTGTAATTTTCTCTTACTGTATGGATGTCCAGTGTGTAGGAGCTTTCGGATGTCGGCGCAGGAAAGAGCAGTTCGTATGGAAGAGCTAACGAGCCTTGAg < 1:297202/149‑1 (MQ=255) gAACTTGCATTTATAAAAGCAT‑GCTTG‑TTTTTTAAATGCAAGCACGCTTGTGTAATTTTCTCTTACTGTATGGATGTCCAGTGTGTAGGAGCTTTCGGATGTCGGCGCAGGAAAGAGCAGTTCGTATGGAAGAGCTAACGAGCCTTGAg < 1:66202/149‑1 (MQ=255) aaCTTGCATTTATAAAAGCAT‑GCTTG‑TTTTTTAAATGCAAGCACGCTTGTGTAATTTTCTCTTACTGTATGGATGTCCAGTGTGTAGGAGCTTTCGGATGTCGGCGCAGGAAAGAGCAGTTCGTATGGAAGAGCTAACGAGCCTTGAGc < 2:258308/149‑1 (MQ=255) ttGCATTTATAAAAGCAT‑GCTTG‑TTTTTTAAATGCAAGCACGCTTGTGTAATTTTCTCTTACTGTATGGATGTCCAGTGTGTAGGAGCTTTCGGATGTCGGCGCAGGAAAGAGCAGTTCGTAt > 3:246567/1‑123 (MQ=255) ttGCATTTATAAAAGCAT‑GCTTG‑TTTTTTAAATGCAAGCACGCTTGTGTAATTTTCTCTTACTGTATGGATGTCCAGTGTGTAGGAGCTTTCGGATGTCGGCGCAGGAAAGAGCAGTTCGTAt < 4:246567/123‑1 (MQ=255) ttGCATTTATAAAAGCAT‑GCTTG‑TTTTTTAAATGCAAGCACGCTTGTGTAATTTTCTCTTACTGTATGGATGTCCAGTGTGTAGGAGCTTTCGGATGTCGGCGCAGGAAAGAGCAGTTCGTATGGAAGAGCTAACGAGCCTTGAGCGGc > 6:242800/1‑149 (MQ=255) gCATTTATAAAAGCAT‑GCTTG‑TTTTTTAAATGCAAGCACGCTTGTGTAATTTTCTCTTACTGTATGGATGTCCAGTGTGTAGGAGCTTTCGGATGTCGGCGCAGGAAAGAGCAGTTCGTATGGAAGAGCTAACGAGCCTTGAGCGGCTg > 6:236964/1‑149 (MQ=255) cATTTATAAAAGCAT‑GCTTG‑TTTTTTAAATGCAAGCACGCTTGTGTAATTTTCTCTTACTGTATGGATGTCCAGTGTGTAGGAGCTTTCGGATGTCGGCGCAGGAAAGAGCAGTTCGTATGGAAGAGCTAACGAGCCTTGAGCGGCTgg < 5:297406/149‑1 (MQ=255) aTTTATAATAGCTT‑GCTTG‑TTTTTTAAATGCAAGCACGGTTGTGTAATTTTCTCTTACTGTATGGATGTCCAGTGTGTAGGAGCTTTCGGATGTCGGCGCAGGATAGAGCAGTTCGTATGGAAGAGCTAACGAGCCTTGAGCGGCTgg < 5:28557/148‑1 (MQ=255) aTTTATAAAAGCAT‑GCTTG‑ATTTTTAAATGCAAGCACGCTTGTGTAATTTTCACTTACTGTAAGGATGTCCAGTGTGTAGGAGCTTTCGGATGTCGCCGCAGGAAAGAGCAGTTAGTATGGAAGAGCTAACGAGCCTTGAGCCGCTgg > 6:28557/1‑148 (MQ=255) tttATAAAAGCAT‑GCTTG‑TTTTTTAAATGCAAGCACGCTTGTGTAATTTTCTCTTACTGTATGGATGTCCAGTGTGTAGGAGCTTTCGGATGTCGGCGCAGGAAAGAGCAGTTCGTATGGAAGAGCTAACGAGCCTTGAGCGGCTGGGc < 7:132780/149‑1 (MQ=255) tttATAAAAGCAT‑GCTTG‑TTTTTTAAATGCAAGCACGCTTGTGTAATTTTCTCTTACTGTATGGATGTCCAGTGTGTAGGAGCTTTCGGATGTCGGCGCAGGAAAGAGCAGTTCGTATGGAAGAGCTAACGAGCCTTGAGCGGCTGGGc > 6:282359/1‑149 (MQ=255) ttATAAAAGCAT‑GCTTG‑TTTTTTAAATGCAAGCACGCTTGTGTAATTTTCTCTTACTGTATGGATGTCCAGTGTGTAGGAGCTTTCGGATGTCGGCGCAGGAAAGAGCAGTTCGTATGGAAGAGCTAACGAGCCTTGAGCGGCTGGGCt > 3:62091/1‑149 (MQ=255) tataAAAGCAT‑GCTTG‑TTTTTTAAATGCAAGCACGCTTGTGTAATTTTCTCTTACTGTATGGATGTCCAGTGTGTAGGAGCTTTCGGATGTCGGCGCAGGAAAGAGCAGTTCGTATGGAAGAGCTAACGAGCCTTGAGCGGCTGGGCtt > 5:97459/1‑149 (MQ=255) taAAAGCAT‑GCTTG‑TTTTTTAAATGCAAGCACGCTTGTGTAATTTTCTCTTACTGTATGGATGTCCAGTGTGTAGGAGCTTTCGGATGTCGGCGCAGGAAAGAGCAGTTCGTATGGAAGAGCTAACGAGCCTTGAGCGGCTGGGCTTGa < 2:161262/149‑1 (MQ=255) aaaGCAT‑GCTTG‑TTTTTTAAATGCAAGCACGCTTGTGTAATTTTCTCTTACTGTATGGATGTCCAGTGTGTAGGAGCTTTCGGATGTCGGCGCAGGAAAGAGCAGTTCGTATGGAAGAGCTAACGAGCCTTGAGCGGCTGGGCTTGAgg < 1:313334/149‑1 (MQ=255) aaGCAT‑GCTTG‑TTTTTTAAATGCAAGCACGCTTGTGTAATTTTCTCTTACTGTATGGATGTCCAGTGTGTAGGAGCTTTCGGATGTCGGCGCAGGAAAGAGCAGTTCGTATGGAAGAGCTAACGAGCCTTGAGCGGCTGGGCTTGAggg > 1:158770/1‑149 (MQ=255) aaGCAT‑GCTTG‑TTTTTTAAATGCAAGCACGCTTGTGTAATTTTCTCTTACTGTATGGATGTCCAGTGTGTAGGAGCTTTCGGATGTCGGCGCAGGAAAGAGCAGTTCGTATGGAAGAGCT‑ACGAGCCTTGAGCGGCTGGGCTTGAgg < 4:9933/147‑1 (MQ=255) aaGCAT‑GCTTG‑TTTTTTAAATGCAAGCACGCTTGTGTAATTTTCTCTTACTGTATGGATGTCCAGTGTGTAGGAGCTTTCGGATGTCGGCGCAGGAAAGAGCAGTTCGTATGGAAGAGCT‑ACGAGCCTTGAGCGGCTGGGCTTGAgg > 3:9933/1‑147 (MQ=255) | GCTACGTTGCGTAACGTCCACCAGAACTCAATCGCCGGATTAACTCGGCGCCTGGTGGCTCATCTGCTGGTTTTTAAAGAGCGGTGGCTGCCGGAGCTGCCAGCTCGATGCAAATGCAAGCGAACTTGCATTTATAAAAGCAT‑GCTTG‑TTTTTTAAATGCAAGCACGCTTGTGTAATTTTCTCTTACTGTATGGATGTCCAGTGTGTAGGAGCTTTCGGATGTCGGCGCAGGAAAGAGCAGTTCGTATGGAAGAGCTAACGAGCCTTGAGCGGCTGGGCTTGAGGG > NC_002947/1748780‑1749065 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |