Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 1,926,514 C→A 9.8% D118Y (GAC→TAC) ‡ PP_1726 ← ABC transporter substrate‑binding protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029471,926,5140CA 9.8% 174.2 / 9.0 61D118Y (GAC→TAC) ‡PP_1726ABC transporter substrate‑binding protein
Reads supporting (aligned to +/- strand):  ref base C (31/24);  new base A (2/4);  total (33/28)
Fisher's exact test for biased strand distribution p-value = 4.00e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.96e-01

TGTACTTGCCTTTCTCCAGGTCATGCCAGGTTTTCGGCCGTTCCTCTTCCTTGACCAGGTCCTTGTTGATGATGAAAGCGATGGTGCCGGTATAGGCCAGCGCCCAGTGGCCGTCCTTGTCCTTGGCCCATTCCGGCACCTGGTCCCAGGTGCTTGGCTTGTAAGGCTGGCTGACGCCCTTGGTCACCGCGATCGGGCCGAAGGCGGCACCCACGTCACCGATGTCGGCGCTGGCGTTGTCCTTCTCGGCTTCGAACTTGGCCAGTTCCTGGGCCGAGCTCATGTC  >  NC_002947/1926370‑1926655
                                                                                                                                                |                                                                                                                                              
tGTACTTGCCTTTCTCCAGGTCATGCCAGGTTTTCGGCCGTTCCTCTTCCTTGACCAGGTCCTTGTTGATGATGAAAGCGATGGTGCCGGTATAGGCCAGCGCCCAGTGGCCGTCCTTGTCCTTGGCCCATTCCGGCACCTGGTCCCAg                                                                                                                                           >  6:117788/1‑149 (MQ=255)
 gTACTTGCCTTTCTCCAGGTCATGCCAGGTTTTCGGCCGTTCCTCTTCCTTGACCAGGTCCTTGTTGATGATGAAAGCGATGGTGCCGGTATAGGCCAGCGCCCAGTGGCCGTCCTTGTCCTTGGCCCATTCCGGCACCTGGTCCCAg                                                                                                                                           <  7:149445/148‑1 (MQ=255)
       gCCTTTCTCCAGGTCATGCCAGGTTTTCGGCCGTTCCTCTTCCTTGACCAGGTCCTTGTTGATGATGAAAGCGATGGTGCCGGTATAGGCCAGCGCCCAGTGGCCGTCCTTGTCCTTGGCCCATTCCGGCACCTGGTCCCAGGTgcttg                                                                                                                                    >  5:46994/1‑149 (MQ=255)
       gCCTTTCTCCAGGTCATGCCAGGTTTTCGGCCGTTCCTCTTCCTTGACCAGGTCCTTGTTGATGATGAAAGCGATGGTGCCGGTATAGGCCAGCGCCCAGTGGCCGTCCTTGTCCTTGGCCCATTCCGGCACCTGGTCCCAGGTgcttg                                                                                                                                    >  7:168317/1‑149 (MQ=255)
       gCCTTTCTCCAGGTCATGCCAGGTTTTCGGCCGTTCCTCTTCCTTGACCAGGTCCTTGTTGATGATGAAAGCGATGGTGCCGGTATAGGCCAGCGCCCAGTGGCCGTCCTTGTCCTTGGCCCATTCCGGCACCTGGGACCAGGTgccg                                                                                                                                     <  4:309827/148‑3 (MQ=255)
       gCCTTTCTCCAGGTCATGCCAGGTTTTCGGCCGTTCCTCTTCCTTGACCAGGTCCTTGTTGATGATGAAAGCGATGGTGCCGGTATAGGCCAGCGCCCAGTGGCCGTCCTTGTCCTTGGCCCATTCCGGCACCTGGGACCAGGTgccg                                                                                                                                     <  4:304854/148‑3 (MQ=255)
       gCCTTTCTCCAGGTCATGCCAGGTTTTCGGCCGTTCCTCTTCCTTGACCAGGTCCTTGTTGATGATGAAAGCGATGGTGCCGGTATAGGCCAGCGCCCAGTGGCCGTCCTTGTCCTTGGCCCATTCCGGCACCTGGGACCAGGTgcc                                                                                                                                      <  6:317790/147‑2 (MQ=255)
        ccTTTCTCCAGGTCATGCCAGGTTTTCGGCCGTTCCTCTTCCTTGACCAGGTCCTTGTTGATGATGAAAGCGATGGTGCCGGTATAGGCCAGCGCCCAGTGGCCGTCCTTGTCCTTGGCCCATTCCGGCACCTGGTCCCAGGTgcttgg                                                                                                                                   >  4:100594/1‑149 (MQ=255)
        ccTTTCTCCAGGTCATGCCAGGTTTTCGGCCGTTCCTCTTCCTTGACCAGGTCCTTGTTGATGATGAAAGCGATGGTGCCGGTATAGGCCAGCGCCCAGTGGCCGTCCTTGTCCTTGGCCCATTCCGGCACCTGGTCCCAGGTgcttgg                                                                                                                                   >  2:175955/1‑149 (MQ=255)
               ccAGGTCATGCCAGGTTTTCGGCCGTTACTCTTCCTTGACCAGGTCCTTGTTGATGATGAAAGATATGGTGCCGGTATAGTCCAGCGCCCAGTGTCAGTAAATGTCCTTGGACCATTAAAGAACATTGTCCCATGTGCTTGGATTGt                                                                                                                              >  5:172140/1‑147 (MQ=255)
                cAGGTCATGCCAGGTTTTCGGCCGTTCCTCTTCCTTGACCAGGTCCTTGTTGATGATGAAAGCGATGGTGCCGGTATAGGCCAGCGCCCAGTGGCCGTCCTTGTCCTTGGCCCATTCCGGCACCTGGTCCCAGGTGCTTGGCTTGTAAg                                                                                                                           >  5:89000/1‑149 (MQ=255)
                cAGGTCATGCCAGGTTTTCGGCCGTTCCTCTTCCTTGACCAGGTCCTTGTTGATGATGAAAGCGATGGTGCCGGTATAGGCCAGCGCCCAGTGGCCGTCCTTGTCCTTGGCCCATTCCGGCACCTGGTCCCAGGTGCTTGGCTTGTAAg                                                                                                                           <  2:181818/149‑1 (MQ=255)
                cAGGTCATGCCAGGTTTTCGGCCGTTCCTCTTCCTTGACCAGGTCCTTGTTGATGATGAAAGCGATGGTGCCGGTATAGGCCAGCGCCCAGTGGCCGTCCTTGTCCTTGGCCCATTCCGGCACCTGGTCCCAGGTGCTTGGCTTGTAAg                                                                                                                           <  1:175955/149‑1 (MQ=255)
                cAGGTCATGCCAGGTTTTCGGCCGTTCCTCTTCCTTGACCAGGTCCTTGTTGATGATGAAAGCGATGGTGCCGGTATAGGCCAGCGCCCAGTGGCCGTCCTTGTCCTTGGCCCATTCCGGCACCTGGTCCCAGGTGCTTGGCTTGTAAg                                                                                                                           >  6:93901/1‑149 (MQ=255)
                   gTCATGCCAGGTTTTCGGCCGTTCCTCTTCCTTGACCAGGTCCTTGTTGATGATGAAAGCGATGGTGCCGGTATAGGCCAGCGCCCAGTGGCCGTCCTTGTCCTTGGCCCATTCCGGCACCTGGTCCCAGGTGCTTGGCTTGTAAggct                                                                                                                        <  8:217598/149‑1 (MQ=255)
                    tccggCCCGGTGTTCGGCCGTTCCTCTTCCTTGACCAGGCCCTGGTGGATGATGAAAGCGATGGTGCCGGTATAGGCCAGCGCCCAGTGGCCGTCCTTGTCCTTGGCCCATTCCGGCACCTGGTCCCAGGTGCTTGGCTTGTAAggctg                                                                                                                       <  8:168317/145‑1 (MQ=255)
                      aTGCCAGGTTTTCGGCCGTTCCTCTTCCTTGACCAGGTCCTTGTTGATGATGAAAGCGATGGTGCCGGTATAGGCCAGCGCCCAGTGGCCGTCCTTGTCCTTGGCCCATTCCGGCACCTGGTCCCAGGTGCTTGGCTTGTAAggctgg                                                                                                                      <  5:117788/148‑1 (MQ=255)
                         ccAGGTTTTCGGCCGTTCCTCTTCCTTGACCAGGTCCTTGTTGATGATGAAAGCGATGGTGCCGGTATAGGCCAGCGCCCAGTGGCCGTCCTTGTCCTTGGCCCATTCCGGCACCTGGTCCCAGGTGCTTGGCTTGTAAGGCTGGCTGa                                                                                                                  >  3:257620/1‑149 (MQ=255)
                           aGGTTTTCGGCCGTTCCTCTTCCTTGACCAGGTCCTTGTTGATGATGAAAGCGATGGTGCCGGTATAGGCCAGCGCCCAGTGGCCGTCCTTGTCCTTGGCCCATTCCGGCACCTGGTCCCAGGTGCTTGGCTTGTAAGGCTGGCTGACg                                                                                                                >  7:222761/1‑149 (MQ=255)
                                ttgggCCGTTCCTATTCGTTGACCAGGTCCTTGTTGATGATGAAAGCGATGGTGCCGGTATAGGCCAGCGCCCAGTGGCCGTCCTTGTCCTTGGCCCATTCCGGCACCTGGTCCCAGGTGCTTGGCTTGTAAGGCTGGCTGACGCCCt                                                                                                            <  3:100594/145‑1 (MQ=255)
                                            tctTCCTTGACCAGGTCCTTGTTGATGATGAAAGCGATGGTGCCGGTATAGGCCAGCGCCCAGTGGCCGTCCTTGTCCTTGGCCCATTCCGGCACCTGGTCCCAGGTGCTTGGCTTGTAAGGCTGGCTGACGCCCTTGGTc                                                                                                       <  3:297165/141‑1 (MQ=255)
                                            tctTCCTTGACCAGGTCCTTGTTGATGATGAAAGCGATGGTGCCGGTATAGGCCAGCGCCCAGTGGCCGTCCTTGTCCTTGGCCCATTCCGGCACCTGGTCCCAGGTGCTTGGCTTGTAAGGCTGGCTGACGCCCTTGGTc                                                                                                       >  4:297165/1‑141 (MQ=255)
                                            tctTCCTTGACCAGGTCCTTGTTGATGATGAAAGCGATGGTGCCGGTATAGGCCAGCGCCCAGTGGCCGTCCTTGTCCTTGGCCCATTCCGGCACCTGGTCCCAGGTGCTTGGCTTGTAAGGCTGGCTGACGCCCTTGGTCACCGCGAt                                                                                               >  2:168394/1‑149 (MQ=255)
                                             ctTCCTTGACCAGGTCCTTGTTGATGATGAAAGCGATGGTGCCGGTATAGGCCAGCGCCCAGTGGCCGTCCTTGTCCTTGGCCCATTCCGGCACCTGGTCCCAGGTgcttgg                                                                                                                                   >  1:10596/1‑112 (MQ=255)
                                             ctTCCTTGACCAGGTCCTTGTTGATGATGAAAGCGATGGTGCCGGTATAGGCCAGCGCCCAGTGGCCGTCCTTGTCCTTGGCCCATTCCGGCACCTGGTCCCAGGTgcttgg                                                                                                                                   <  2:10596/112‑1 (MQ=255)
                                                ccTTGACCAGGTCCTTGTTGATGATGAAAGCGATGGTGCCGGTATAGGCCAGCGCCCAGTGGCCGTCCTTGTCCTTGGCCCATTCCGGCACCTGGTCCCAGGTGCTTGGCTTGTAAGGCTGGCTGACGCCCTTGGTCACCGCGATCg                                                                                             <  8:222761/147‑1 (MQ=255)
                                                 cTTGACCCGGGCCTTGATCATGATGAAAGCGATGGTGCCGGTATAGGCCAGCGCCCAGTGGCCGTCCTTGTCCTAGGCCCATTCCGGCACCTGGTCCCAGGTGCTTGGCTTGTAAGGCTGGCTGACGCCCTTGGTCACCGCGATCGGGc                                                                                          <  4:18754/149‑1 (MQ=255)
                                                          gTCCTTGTTGATGATGAAATCGATTGTGCCGGTATAGGCCAGCGCCCAGTGGCCGTCCTTGTCCTTGGCCCATTCCGGCACCTGGTCCCAGGTGCTTGGCTTGTAAGGCTGGCTGACGCCCTTGGTCACCGCGATCGGGCCGAAggcgg                                                                                 <  6:172140/149‑1 (MQ=255)
                                                              ttgttgATGATGAAAGCGATGGTGCCGGTATAGGCCAGCGCCCAGTGGCCGTCCTTGTCCTTGGCCCATTCCGGCACCTGGTCCCAGGTGCTTGGCTTGTAAGGCTGGCTGACGCCCTTGGTCACCGCGATCGGGCCGAAGGCGGCAcc                                                                             >  4:267614/1‑149 (MQ=255)
                                                                          aaaGCGATGGTGCCGGTATAGGCCAGCGCCCAGTGGCCGTCCTTGTCCTTGGCCCATTCCGGCACCTGGGACCAGGTgccg                                                                                                                                     >  3:68055/1‑79 (MQ=255)
                                                                          aaaGCGATGGTGCCGGTATAGGCCAGCGCCCAGTGGCCGTCCTTGTCCTTGGCCCATTCCGGCACCTGGGACCAGGTgccg                                                                                                                                     <  4:68055/81‑3 (MQ=255)
                                                                               gATGGTGCCGGTATAGGCCAGCGCCCAGTGGCCGTCCTTGTCCTTGGCCCATTCCGGCACCTGGTCCCAGGTGCTTGGCTTGTAAGGCTGGCTGACGCCCTTGGTCACCGCGATCGGGCCGAAGGCGGCACCCACGTCACCGATGTCgg                                                            >  6:329386/1‑149 (MQ=255)
                                                                               gATGGTGCCGGTATAGGCCAGCGCCCAGTGGCCGTCCTTGTCCTTGGCCCATTCCGGCACCTGGTCCCAGGTGCTTGGCTTGTAAGGCTGGCTGACGCCCTTGGTCACCGCGATCGGGCCGAAGGCGGCACCCACGTCACCGATGTCgg                                                            >  7:82162/1‑149 (MQ=255)
                                                                                aTGGTGCCGGTATAGGCCAGCGCCCAGTGGCCGTCCTTGTCCTTGGCCCATTCCGGCACCTGGTCCCAGGTGCTTGGCTTGTAAGGCTGGCTGACGCCCTTGGTCACCGCGATCGGGCCGAAGGCGGCACCCACGTCACCGATGTCGgc                                                           <  3:267614/149‑1 (MQ=255)
                                                                                aTGGTGCCGGTATAGGCCAGCGCCCAGTGGCCGTCCTTGTCCTTGGCCCATTCCGGCACCTGGTCCCAGGTGCTTGGCTTGTAAGGCTGGCTGACGCCCTTGGTCACCGCGATCGGGCCGAAGGCGGCACCCACGTCACCGATGTCGgc                                                           <  5:93901/149‑1 (MQ=255)
                                                                                    tGCCGGTATAGGCCAGCGCCCAGTGGCCGTCCTTGTCCTTGGCCCATTCCGGCACCTGGTCCCAGGTGCTTGGCTTGTAAGGCTGGCTGACGCCCTTGGTCACCGCGATCGGGCCGAAGGCGGCACCCACGTCACCGATGTCGGCGCTg                                                       >  1:61537/1‑149 (MQ=255)
                                                                                    tGCCGGTATAGGCCAGCGCCCAGTGGCCGTCCTTGTCCTTGGCCCATTCCGGCACCTGGTCCCAGGTGCTTGGCTTGTAAGGCTGGCTGACGCCCTTGGTCACCGCGATCGGGCCGAAGGCGGCACCCACGTCACCGATGTCGGCGCTg                                                       >  7:214530/1‑149 (MQ=255)
                                                                                       cGGTATAGGCCAGCGCCCAGTGGCCGTCCTTGTCCTTGGCCCATTCCGGCACCTGGTCCCAGGTGCTTGGCTTGTAAGGCTGGCTGACGCCCTTGGTCACCGCGATCGGGCCGAAGGCGGCACCCACGTCACCGATGTCGGCGCTGGCg                                                    <  6:89000/149‑1 (MQ=255)
                                                                                          tataGGCCAGCGCCCAGTGGCCGTCCTTGTCCTTGGCCCATTCCGGCACCTGGTCCCAGGTGCTTGGCTTGTAAGGCTGGCTGACGCCCTTGGTCACCGCGATCGGGCCGAAGGCGGCACCCACGTCACCGATGTCGGCGCTGGCGTTg                                                 <  6:46994/149‑1 (MQ=255)
                                                                                               gCCAGCGCCCAGTGGCCGTCCTTGTCCTTGGCCCATTCCGGCACCTGGTCCCAGGTGCTTGGCTTGTAAGGCTGGCTGACGCCCTTGGTCACCGCGATCGGGCCGAAGGCGGCACCCACGTCACCGATGTCGGCGCTGGCGTTGTCCtt                                            >  5:261548/1‑149 (MQ=255)
                                                                                                 cAGCGCCCAGTGGCCGTCCTTGTCCTTGGCCCATTCCGGCACCTGGTCCCAGGTGCTTGGCTTGTAAGGCTGGCTGACGCCCTTGGTCACCGCGATCGGGCCGAAGGCGGCACCCACGTCACCGATGTCGGCGCTGGCGTTGTCCTtct                                          >  7:60517/1‑149 (MQ=255)
                                                                                                  aGCGCCCAGTGGCCGTCCTTGTCCTTGGCCCATTCCGGCACCTGGTCCCAGGTGCTTGGCTTGTAAGGCTGGCTGACGCCCTTGGTCACCGCGATCGGGCCGAAGGCGGCACCCACGTCACCGATGTCGGCGCTGGCGTTGTCCTtctc                                         <  8:82162/149‑1 (MQ=255)
                                                                                                     gcCCAGTGGCCGTCCTTGTCCTTGGCCCATTCCGGCACCTGGTCCCAGGTGCTTGGCTTGTAAGGCTGGCTGACGCCCTTGGTCACCGCGATCGGGCCGAAGGCGGCACCCACGTCACCGATGTc                                                              >  4:131601/1‑125 (MQ=255)
                                                                                                     gcCCAGTGGCCGTCCTTGTCCTTGGCCCATTCCGGCACCTGGTCCCAGGTGCTTGGCTTGTAAGGCTGGCTGACGCCCTTGGTCACCGCGATCGGGCCGAAGGCGGCACCCACGTCACCGATGTc                                                              <  3:131601/125‑1 (MQ=255)
                                                                                                        cAGTGGCCGTCCTTGTCCTTGGCCCATTCCGGCACCTGGTCCCAGGTGCTTGGCTTGTAAGGCTGGCTGACGCCCTTGGTCACCGCGATCGGGCCGAAGGCGGCACCCACGTCACCGATGTCGGCGCTGGCGTTGTCCTTCTCGGCTTc                                   >  7:506/1‑149 (MQ=255)
                                                                                                              ccGTCCTTGTCCTTGGCCCATTCCGGCACCTGGTCCCTAGGTGCTTGGCTTGTAAGGCTGGCTGACGCCCTTGGTCACCGCGATCGGGCCGAAGGCGGCACCCACGTCACCGATGTCGGCGCTGGCGTTGTCCTTCTCGGCTTCGAACt                              >  1:58350/1‑149 (MQ=255)
                                                                                                                    ttgtccttgGCCCATTCCGGCACCTGGTCCCAGGTGCTTGGCTTGTAAGGCTGGCTGACGCCCTTGGTCACCGCGATCGGGCCGAAGGCGGCACCCACGTCACCGATGTCGGCGCTGGCGTTGTCCTTCTCGGCTTCGAACTTGGCCAg                       >  5:298306/1‑149 (MQ=255)
                                                                                                                      gtccttgGCCCATTCCGGCACCTGGTCCCAGGTGCTTGGCTTGTAAGGCTGGCTGACGCCCTTGGTCACCGCGATCGGGCCGAAGGCGGCACCCACGTCACCGATGTCGGCGCTGGCGTTGTCCTTCTCGGCTTCGAACTTGGCCAg                       <  6:298306/147‑1 (MQ=255)
                                                                                                                        ccttgGCCCATTCCGGCACCTGGTCCCAGGTGCTTGGCTTGTAAGGCTGGCTGACGCCCTTGGTCACCGCGATCGGGCCGAAGGCGGCACCCACGTCACCGATGTCGGCGCTGGCGTTGTCCTTCTCGGCTTCGAACTTGGCCAGTTcc                   >  3:121223/1‑149 (MQ=255)
                                                                                                                         cttgGCCCTTTCCGGCACCTGGTCCCAGGTGCTTGGCTTGTAAGGCTGGCTGACGCCCTTGGTCACCGCGATCGGGCCGAAGGCGGCACCCACGTCACCGATGTCGGCGCTGGCGTTGTCCTTCTCGGCTTCGAACTTGGCCAGTTCCt                  >  2:111157/1‑149 (MQ=255)
                                                                                                                            ggCCCATTCCGGCACCTGGTCCCAGGTGCTTGGCTTGTAAGGCTGGCTGACGCCCTTGGTCACCGCGATCGGGCCGAAGGCGGCACCCACGTCACCGATGTCGGCGCTGGCGTTGTCCTTCTCGGCTTCGAACTTGGCCAGTTCCTggg               >  6:18180/1‑149 (MQ=255)
                                                                                                                            ggCCCATTCCGGCACCTGGTCCCAGGTGCTTGGCTTGTAAGGCTGGCTGACGCCCTTGGTCACCGCGATCGGGCCGAAGGCGGCACCCACGTCACCGATGTCGGCGCTGGCGTTGTCCTTCTCGGCTTCGAACTTGGCCAGTTCCTgg                <  5:329386/148‑1 (MQ=255)
                                                                                                                             gCCCTTTCCGGCACCTGGTCCCAGGTGCTTGGCTTGTAAGGCTGGCTGACGCCCTTGGTCACCGCGATCGGGCCGAAGGCGGCACCCACGTCACCGATGTCGGCGCTGGCGTTGTCCTTCTCGGCTTCGAACTTGGCCAGTTCCTggg               <  1:111157/148‑1 (MQ=255)
                                                                                                                               ccATTCCGGCACCTGGTCCCAGGTGCTTGGCTTGTAAGGCTGGCTGACGCCCTTGGTCACCGCGATCGGGCCGAAGGCGGCACCCACGTCACCGATGTCGGCGCTGGCGTTGTCCTTCTCGGCTTCGAACTTGGCCAGTTCCTGGGcc             >  1:195963/1‑148 (MQ=255)
                                                                                                                               ccATTCCGGCACCTGGTCCCAGGTGCTTGGCTTGTAAGGCTGGCTGACGCCCTTGGTCACCGCGATCGGGCCGAAGGCGGCACCCACGTCACCGATGTCGGCGCTGGCGTTGTCCTTCTCGGCTTCGAACTTGGCCAGTTCCTGGGCCg            <  8:214530/149‑1 (MQ=255)
                                                                                                                                cATTCCGGCACCTGGTCCCAGGTGCTTGGCTTGTAAGGCTGGCTGACGCCCTTGGTCACCGCGATCGGGCCGAAGGCGGCACCCACGTCACCGATGTCGGCGCTGGCGTTGTCCTTCTCGGCTTCGAACTTGGCCAGTTCCTGGGCCGa           <  1:168394/149‑1 (MQ=255)
                                                                                                                                 aTTCCGGCACCTGGTCCCAGGTGCTTGGCTTGTAAGGCTGGCTGACGCCCTTGGTCACCGCGATCGGGCCGAAGGCGGCACCCACGTCACCGATGTCGGCGCTGGCGTTGTCCTTCTCGGCtt                                    <  3:138577/123‑1 (MQ=255)
                                                                                                                                 aTTCCGGCACCTGGTCCCAGGTGCTTGGCTTGTAAGGCTGGCTGACGCCCTTGGTCACCGCGATCGGGCCGAAGGCGGCACCCACGTCACCGATGTCGGCGCTGGCGTTGTCCTTCTCGGCtt                                    >  4:138577/1‑123 (MQ=255)
                                                                                                                                       gCACCTGGGACCAGGTGCTTGGCTTGTAAGGCTGGCTGACGCCCTTGGTCACCGCGATCGGGCCGAAGGCGGCACCCACGTCACCGATGTCGGCGCTGGCGTTGTCCTTCTCGGCTTCGAACTTGGCCAGTTCCTGGGCCGAGCTCATg    >  8:113851/1‑149 (MQ=255)
                                                                                                                                        cACCTGGTCCCAGGTGCTTGGCTTGTAAGGCTGGCTGACGCCCTTGGTCACCGCGATCGGGCCGAAGGCGGCACCCACGTCACCGATGTCGGCGCTGGCGTTGTCCTTCTCGGCTTCGAACTTGGCCAGTTCCTGGGCCGAGCTCATGt   >  2:166913/1‑149 (MQ=255)
                                                                                                                                         aCCTGGTCCCAGGTGCTTGGCTTGTAAGGCTGGCTGACGCCCTTGGTCACCGCGATCGGGCCGAAGGCGGCACCCACGTCACCGATGTCGGCGCTGGCGTTGTCCTTCTCGGCTTCGAACTTGGCCAGTTCCTGGGCCGAGCTCATGTc  >  5:126740/1‑149 (MQ=255)
                                                                                                                                                |                                                                                                                                              
TGTACTTGCCTTTCTCCAGGTCATGCCAGGTTTTCGGCCGTTCCTCTTCCTTGACCAGGTCCTTGTTGATGATGAAAGCGATGGTGCCGGTATAGGCCAGCGCCCAGTGGCCGTCCTTGTCCTTGGCCCATTCCGGCACCTGGTCCCAGGTGCTTGGCTTGTAAGGCTGGCTGACGCCCTTGGTCACCGCGATCGGGCCGAAGGCGGCACCCACGTCACCGATGTCGGCGCTGGCGTTGTCCTTCTCGGCTTCGAACTTGGCCAGTTCCTGGGCCGAGCTCATGTC  >  NC_002947/1926370‑1926655

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: