| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,098,760 | A→T | 5.6% | I377N (ATT→AAT) | PP_1875 ← | two‑component system sensor histidine kinase/response regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,098,760 | 0 | A | T | 5.6% | 220.1 / 2.7 | 71 | I377N (ATT→AAT) | PP_1875 | two‑component system sensor histidine kinase/response regulator |
| Reads supporting (aligned to +/- strand): ref base A (34/33); new base T (2/2); total (36/35) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.16e-01 | |||||||||||
TGACGATCTGCCGCACACGCGTGGGGTCGCCGAGCACGCTGCTGGGGAAGTCGCTGGCGATCAGGCAGGTCAGCTCCACACTTTGCGCGGTGTTCTGCGACAGCAGGTTGGCGGTGTCTTCCACCATCGAGCCCATGTCGAACGCAATGCGTTCCAGCTCTAGCTGGCCGGCATCGAACTTGGACAAGTCAAGAATATCGTTCAGCAGCTCTACCAGCACCTTGCCCGAGTCATGGGCGATAGCCAGTTGCTGGCGTTGCTCGCTGGGCAGCGGGTTGTCCAGCGCCAGGGCGA > NC_002947/2098614‑2098907 | tGACGATCTGCCGCACACGCGTGGGGTCGCCGAGCACGCTGCTGGGGAAGTCGCTGGCGATCAGGCAGGTCAGCTCCACACTTTGCGCGGTGTTCTGCGACAGCAGGTTGGCGGTGTCTTCCACCATCGAGCCCATGTCGAACGCAATg > 8:94794/1‑149 (MQ=255)tGACGATCTGCCGCACACGCGTGGGGTCGCCGAGCACGCTGCTGGGGAAGTCGCTGGCGATCAGGCAGGTCAGCTCCACACTTTGCGCGGTGTTCTGCGACAGCAGGTTGGCGGTGTCTTCCACCATCGAGCCCATGTCGAACGCAATg > 6:301296/1‑149 (MQ=255)tGACGATCTGCCGCACACGCGTGGGGTCGCCGAGCACGCTGCTGGGGAAGTCGCTGGCGATCAGGCAGGTCAGCTCCACACTTTGCGCGGTGTTCTGCGACAGCAGGTTGGCGGTGTCTTCCACCATCGAGCCCATGTCGAACGCAATg > 1:28323/1‑149 (MQ=255)tGACGATCTGCCGCACACGCGTGGGGTCGCCGAGCACGCTGCTGGGGAAGTCGCTGGCGATCAGGCAGGTCAGCTCCACACTTTGCGCGGTGTTCTGCGACAGCAGGTTGGCGGTGTCTTCCACCATCGAGCCCATGTCGAACGCAATg > 7:256633/1‑149 (MQ=255)tGACGATCTGCCGCACACGCGTGGGGTCGCCGAGCACGCTGCTGGGGAAGTCGCTGGCGATCAGGCAGGTCAGCTCCACACTTTGCGCGGTGTTCTGCGACAGCAGGTTGGCGGTGTCTTCCACCATCGAGCCCATGTCGAACGCAATg > 8:157438/1‑149 (MQ=255) gCACACGCGTGGGGTCGCCGAGCACGCTGCTGGGGAAGTCGCTGGCGATCAGGCAGGTCAGCTCCACACTTTGCGCGGTGTTCTGCGACAGCAGGTTGGCGGTGTCTTCCACCATCGAGCCCATGTCGAACGCAATGCGTTCCAGctct < 6:295694/149‑1 (MQ=255) gTGGGGTCGCCGAGCACGCTGCTGGGGAAGTCGCTGGCGATCAGGCAGGTCAGCTCCACACTTTGCGCGGTGTTCTGCGACAGCAGGTTGGCGGTGTCTTCCACCATCGAGCCCATGTCGAACGCAATGCGTTCCAGCTCTAGCTGGcc > 2:254786/1‑149 (MQ=255) tGGGGTCGCCGAGCACGCTGCTGGGGAAGTCGCTGGCGATCAGGCAGGTCAGCTCCACACTTTGCGCGGTGTTCTGCGACAGCAGGTTGGCGGTGTCTTCCACCATCGAGCCCATGTCGAACGCAATGCGTTCCAGCTCTAGCTGGCCg < 6:129940/149‑1 (MQ=255) tGGGGTCGCCGAGCACGCTGCTGGGGAAGTCGCTGGCGATCAGGCAGGTCAGCTCCACACTTTGCGCGGTGTTCTGCGACAGCAGGTTGGCGGTGTCTTCCACCATCGAGCCCATGTCGAACGCAATGCGTTCCAGCTCTAGCTGGCCg < 8:162610/149‑1 (MQ=255) aGCACGCTGCTGGGGAAGTCGCTGGCGATCAGGCAGGTCAGCTCCACACTTTGCGCGGTGTTCTGCGACAGCAGGTTGGCGGTGTCTTCCACCATCGAGCCCATGTCGAACGCAATGCGTTCCAGCTCTAGCTGGCCGGCATCGAACtt < 5:138825/149‑1 (MQ=255) aCGCTGCTGGGGAAGTCGCTGGCGATCAGGCAGGTCAGCTCCACACTTTGCGCGGTGTTCTGCGACAGCAGGTTGGCGGTGTCTTCCACCATCGAGCCCATGTCGAACGCAATGCGTTCCAGCTCTAGCTGGCCGGCATCGAACTTGGa < 6:12882/149‑1 (MQ=255) gctgctGGGGAAGTCGCTGGCGATCAGGCAGGTCAGCTCCACACTTTGCGCGGTGTTCTGCGACAGCAGGTTGGCGGTGTCTTCCACCATCGAGCCCATGTCGAACGCAATGCGTTCCAGCTCTAGCTGGCCGGCATCGAACTTGGAc > 5:75941/1‑148 (MQ=255) tgctgGGGAAGTCGCTGGCGATCAGGCAGGTCAGCTCCACACTTTGCGCGGTGTTCTGCGACAGCAGGTTGGCGGTGTCTTCCACCATCGAGCCCATGTGGAACGCATTGCGTTcgacat > 4:284903/1‑115 (MQ=255) tgctgGGGAAGTCGCTGGCGATCAGGCAGGTCAGCTCCACACTTTGCGCGGTGTTCTGCGACAGCAGGTTGGCGGTGTCTTCCACCATCGAGCCCATGTGGAACGCATTGCGTTcgacat < 3:284903/120‑6 (MQ=255) gggAAGTCGCTGGCGATCAGGCAGGTCAGCTCCACACTTTGCGCGGTGTTCTGCGACAGGAGGTTGGCGGTGTCTTCCACCATCGAGCCCATGTCGAACGCAATGCGTTCCAGCTCTAGCTGGCCGGCATCGAACTTGGACAAGTCAAg < 4:167988/149‑1 (MQ=255) gggAAGTCGCTGGCGATCAGGCAGGTCAGCTCCACACTTTGCGCGGTGTTCTGCGACAGCAGGTTGGCGGTGTCTTCCACCATCGAGCCCATGTCGAACGCAATGCGTTCCAGCTCTAGCTGGCCGGCATCGAACTTGGACAAGTCaa < 6:75941/148‑1 (MQ=255) gAAGTCGCTGGCGATCAGGCAGGTCAGCTCCACACTTTGCGCGGTGTTCTGCGACAGCAGGTTGGCGGTGTCTTCCACCATCGAGCCCAAGTCGAACGCAATGCGTTCCAGCTCTAGCTGGCCGGCATCGAACTTGGACAAGTCAAGa > 3:4283/1‑148 (MQ=255) tCGCTGGCGATCAGGCAGGTCAGCTCCACACTTTGCGCGGTGTTCTGCGACAGCAGGTTGGCGGTGTCTTCCACCATCGAGCCCATGTCGAACGCAATGCGTTCCAGCTCTAGCTGGCCGGCATCGAACTTGGACAAGTCAAGAATATc < 1:254786/149‑1 (MQ=255) cTGGCGATCAGGCAGGTCAGCTCCACACTTTGCGCGGTGTTCTGCGACAGCAGGTTGGCGGTGTCTTCCACCATCGAGCCCATGTCGAACGCAATGCGTTCCAGCTCTAGCTGGCCGGCATCGAACTTGGACAAGTCAAGAATATCGtt > 7:253486/1‑149 (MQ=255) aTCAGGCAGGTCAGCTCCACACTTTGCGCGGTGTTCTGCGACAGCAGGTTGGCGGTGTCTTCCACCATCGAGCCCATGTCGAACGCAATGCGTTCCAGCTCTAGCTGGCCGGCa > 4:45299/1‑114 (MQ=255) aTCAGGCAGGTCAGCTCCACACTTTGCGCGGTGTTCTGCGACAGCAGGTTGGCGGTGTCTTCCACCATCGAGCCCATGTCGAACGCAATGCGTTCCAGCTCTAGCTGGCCGGCa < 3:45299/114‑1 (MQ=255) aggTCAGCTCCACACTTTGCGCGGTGTTCTGCGACAGCAGGTTGGCGGTGTCTTCCACCATCGAGCCCATGTCGAACGCAATGCGTTCCAGCTCTAGCTGGCCGGCATCGAACTTGGACAAGCCAAGAATATCGTTCAGCAGCTCTAcc < 1:9359/149‑1 (MQ=255) tCAGCTCCACACTTTGCGCGGTGTTCTGCGACAGCAGGTTGGCGGTGTCTTCCACCATCGAGCCCATGTCGAACGCAATGCGTTCCAGCTCTAGCTGGCCGGCATCGAACTTGGACAAGTCAAGAATATCGTTCAGCAGCTCTACCAGc > 1:241503/1‑149 (MQ=255) cTCCACACTTTGCGCGGTGTTCTGCGACAGCAGGTTGGCGGTGTCTTCAACCATCGAGCCCATGTCGAACGCAATGCGTTCCAGCTCTAGCTGGCCGGCATCGAACTTGGACAAGTCAAGAATATCGTTCAGCAGCTCTACCAGCACCt > 2:309486/1‑149 (MQ=255) cacaCTTTGCGCGGTGTTCTGCGACAGCAGGTTGGCGGTGTCTTCCACCATCGAGCCCATGTCGAACGCAATGCGTTCCAGCTCTAGCTGGCCGGCATCGAACTTGGACAAGTCAAGAATATc > 1:160365/1‑123 (MQ=255) cacaCTTTGCGCGGTGTTCTGCGACAGCAGGTTGGCGGTGTCTTCCACCATCGAGCCCATGTCGAACGCAATGCGTTCCAGCTCTAGCTGGCCGGCATCGAACTTGGACAAGTCAAGAATATc < 2:160365/123‑1 (MQ=255) cacaCTTTGCGCGGTGTTCTGCGACAGCAGGTTGGCGGTGTCTTCCACCATCGAGCCCATGTCGAACGCAATGCGTTCCAGCTCTAGCTGGCCGGCATCGAACTTGGACAAGTCAAGAATATCGTTCAGCAGCTCTACCAGCACCTTg < 6:97873/148‑1 (MQ=255) cacaCTTTGCGCGGTGTTCTGCGACAGCAGGTTGGCGGTGTCTTCCACCATCGAGCCCATGTCGAACGCAATGCGTTCCAGCTCTAGCTGGCCGGCATCGAACTTGGACAAGTCAAGAATATCGTTCAGCAGCTCTACCAGCACCTTg > 5:97873/1‑148 (MQ=255) acacTTTGCGCGGTGTTCTGCGACAGCAGGTTGGCGGTGTCTTCCACCATCGAGCCCATGTCGAACGCAATGCGTTCCAGCTCTAGCTGGCCGGCATCGAACTTGGACAAGTCAAGAATATCGTTCAGCAGCTCTACCAGCACCTTGcc < 7:94794/149‑1 (MQ=255) cacTTTGCGCGGTGTTCTGCGACAGCAGGTTGGCGGTGTCTTCCACCATCGAGCCCATGTCGAACGCAATGCGTTCCAGCTCTAGCTGGCCGGCATCGAACTTGGACAAGTCAAGAATATCGTTCAGCAGCTCTACCAGCACCTTGccc < 8:94273/149‑1 (MQ=255) cTTTGCGCGGTGTTCTGCGACAGCAGGTTGGCGGTGTCTTCCACCATCGAGCCCATGTCGAACGCAATGCGTTCCAGCTCTAGCTGGCCGGCATCGAACTTGGACAAGTCAAGAATATCGTTCAGCAGCTCTACCAGCACCTTGCCCGa < 8:253486/149‑1 (MQ=255) cTTTGCGCGGTGTTCTGCGACAGCAGGTTGGCGGTGTCTTCCACCATCGAGCCCATGTCGAACGCAATGCGTTCCAGCTCTAGCTGGCCGGCATCGAACTTGGACAAGTCAAGAATATCGTTCAGCAGCTCTACCAGCACCTTGCCCGa < 6:118931/149‑1 (MQ=255) tttGCGCGGTGTTCTGCGACAGCAGGTTGGCGGTGTCTTCCACCATCGAGCCCATGTCGAACGCAATGCGTTCCAGCTCTAGCTGGCCGGCATCGAACTTGGACAAGTCAAGAATATCGTTCAGCAGCTCTACCAGCACCTTGCCCGAg > 4:95376/1‑149 (MQ=255) tttGCGCGGTGGTCTGCGACAGCAGGTTGGCGGTGTCTTCCTCCATCGAGCCCATGTCGAACGCAAAGCGTTACAGCTCTGGCTGGCCGGCATAGAACTTGGACAAGTAAAGAATATCGTTGAGCAGCTCTACGAGCAGCTTGTGCGAg > 4:36519/1‑149 (MQ=255) gcgGTGTTCTGCGACAGCAGGTTGGCGGTGTCTTCCACCATCGAGCCCATGTCGAACGCAATGCGTTCCAGCTCTAGCTGGCCGGCATCGAACTTGGACAAGTCAAGAATATCGTTCAGCAGCTCTACCAGCACCTTGCCCGAGTCATg < 6:178602/149‑1 (MQ=255) ggTGTTCTGCGACAGCAGGTTGGCGGTGTCTTCCACCATCGAGCCCATGTCGAACGCAATGCGTTCCAGCTCTAGCTGGCCGGCATCGAACTTGGACAAGTCAAGAATATCGTTCAGCAGCTCTACCAGCACCTTGcc > 8:58236/1‑138 (MQ=255) ggTGTTCTGCGACAGCAGGTTGGCGGTGTCTTCCACCATCGAGCCCATGTCGAACGCAATGCGTTCCAGCTCTAGCTGGCCGGCATCGAACTTGGACAAGTCAAGAATATCGTTCAGCAGCTCTACCAGCACCTTGcc < 7:58236/138‑1 (MQ=255) cGACAGCAGGTTGGCGGTGTCTTCCACCATCGAGCCCATGTCGAACGCAATGCGTTCCAGCTCTAGCTGGCCGGCATCGAACTTGGACAAGTCAAGAATATCGTTCAGCAGCTCTACCAGCACCTTGCCCGAGTCATGGGCGATAGCCa < 5:301296/149‑1 (MQ=255) cGACAGCAGGTTGGCGGTGTCTTCCACCATCGAGCCCATGTCGAACGCAATGCGTTCCAGCTCTAGCTGGCCGGCATCGAACTTGGACAAGTCAAGAATATCGTTCAGCAGCTCTACCAGCACCTTGCCCGAGTCATGGGCGATAGCCa > 2:153569/1‑149 (MQ=255) gACAGCAGGTTGGCGGTGTCTTCCACCATCGAGCCCATGTCGAACGCAATGCGTTCCAGCTCTAGCTGGCCGGCATCGAACTTGGACAAGTCAAGAATATCGTTCAGCAGCTCTACCAGCACCTTGCCCGAGTCATGGGCGATAGCCAg > 7:19554/1‑149 (MQ=255) aaagatggTTGGGTGTTTCTTCCACCATCGAGCCCATGTCGAACTCTATGCGTTCCAGCTCTAGCTGGGCGGCATCGAACTTTGACAATTCAAGAATATCGTTCATCAGCTCTACCATCACCTTGCCCGAGTTATGTGCGATAGCCAg < 4:4283/142‑1 (MQ=255) cagcagGTTGGCGGTGTCTTCCACCATCGAGCCCATGTCGAACGCAATGCGTTCCAGCTCTAGCTGGCCGGCATCGAACTTGGACAAGTCAAGAATATCGTTCAGCAGCTCTACCAGCACCTTGCCCGAGTCATGGGCGATAGCCAGtt > 2:111139/1‑149 (MQ=255) agGTTGGCGGTGTCTTCCACCATCGAGCCCATGTCGAACGCAATGCGTTCCAGCTCTAGCTGGCCGGCATCGAACTTGGACAAGTCAAGAATATCGTTCAGCAGCTCTACCAGCACCTTGCCCGAGTCATGGGCGATAGCCAGTTGCTg < 2:241503/149‑1 (MQ=255) gTTGGCGGTGTCTTCCACCATCGAGCCCATGTCGAACGCAATGCGTTCCAGCTCTAGCTGGCCGGCATCGAACTTGGACAAGTCAAGAATATCGTTCAGCAGCTCTACCAGCACCTTGCCCGAGTCATGGGCGATAGCCAGTTGCTGGc < 8:256633/149‑1 (MQ=255) ccgatctCTTCCACCATCGAGCCCATGTCGAACGCAATGCGTTCCAGCTCTAGCTGGCCGGCATCGAACTTGGACAAGTCAAGAATATCGTTCAGCAGCTCTACCAGCACCTTGCCCGAGTCATGGGCGATAGCCAGTTGCTGGCGTTg < 7:207351/143‑1 (MQ=255) cGGTGTCTTCCACCATCGAGCCCATGTCGAACGCAATGCGTTCCAGCTCTAGCTGGCCGGCATCGAACTTGGACAAGTCAAGAATATCGTTCAGCAGCTCTACCAGCACCTTGCCCGAGTCATGGGCGATAGCCAGTTGCTGGCGTTGc < 1:153569/149‑1 (MQ=255) ttCCACCATCGAGCCCATGTCGAACGCAATGCGTTCCAGCTCTAGCTGGCCGGCATCGAACTTGGACAAGTCAAGAATATCGTTCAGCAGCTCTACCAGCACCTTGCCCGAGTCATGGGCGATAGCCAGTTGCTGGCGTTGCTCGCTg > 1:36752/1‑148 (MQ=255) ttCCACCATCGAGCCCATGTCGAACGCAATGCGTTCCAGCTCTAGCTGGCCGGCATCGAACTTGGACAAGTCAAGAATATCGTTCAGCAGCTCTACCAGCACCTTGACCGAGTCATGGGCGATAGCCAGTTGATGGCGTTg > 8:207351/1‑141 (MQ=255) ccaccaTCGAGCCCATGTCGAACGCAATGCGTTCCAGCTCTAGCTGGCCGGCATCGAACTTGGACAAGTCAAGAATATCGTTCAGCAGCTCTACCAGCACCTTGCCCGAGTCATGGGCGATAGCCAGTTGCTGGCGTTGCTCGCTgg < 7:157438/147‑1 (MQ=255) accaTCGAGCCCATGTCGAACGCAATGCGTTCCAGCTCTAGCTGGCCGGCATCGAACTTGGACAAGTCAAGAATATCGTTCAGCAGCTCTACCAGCACCTTGCCCGAGTCATGGGCGATAGCCAGTTGCTGGCGTTGCTCGCTGGGCAg > 8:181258/1‑149 (MQ=255) ccaTCGAGCCCATGTCGAACGCAATGCGTTCCAGCTCTAGCTGGCCGGCATCGAACTTGGACAAGTCAAGAATATCGTTCAGCAGCTCTACCAGCACCTTGCCCGAGTCATGGGCGATAGCCAGTTGCTGGCGTTGCTCGCTGGGCAGc < 2:28323/149‑1 (MQ=255) caTCGAGCCCATGTCGAACGCAATGCGTTCCAGCTCTAGCTGGCCGGCATCGAACTTGGACAAGTCAAGAATATCGTTCAGCAGCTCTACCAGCACCTTGCCCGAGTCATGGGCGATAGCCAGTTGCTGGCGTTGCTCGCTGGGCAGCg > 8:172075/1‑149 (MQ=255) aTCGAGCCCATGTCGAACGCAATGCGTTCCAGCTCTAGCTGGCCGGCATCGAACTTGGACAAGTCAAGAATATCGTTCAGCAGCTCTACCAGCACCTTGCCCGAGTCATGGGCGATAGCCAGTTGCTGGCGTTGCTCGCTGGGCAGCgg > 3:307436/1‑149 (MQ=255) tCGAGCCCATGTCGAACGCAATGCGTTCCAGCTCTAGCTGGCCGGCATCGAACTTGGACAAGTCAAGAATATCGTTCAGCAGCTCTACCAGCACCTTGCCCGAGTCATGGGCGATAGCCAGTTGCTGGCGTTGCTCGCTGGGCAGCggg < 2:265114/149‑1 (MQ=255) tCGAGCCCATGTCGAACGCAATGCGTTCCAGCTCTAGCTGGCCGGCATCGAACTTGGACAAGTCAAGAATATCGTTCAGCAGCTCTACCAGCACCTTGCCCGAGTCATGGGCGATAGCCAGTTGCTGGCGTTGCTCGCTGGGCAGCggg < 8:2174/149‑1 (MQ=255) ccATGTCGAACGCAATGCGTTCCAGCTCTAGCTGGCCGGCATCGAACTTGGACAAGTCAAGAATATCGTTCAGCAGCTCTACCAGCACCTTGCCCGAGTCATGGGCGATAGCCAGt < 5:54663/116‑1 (MQ=255) ccATGTCGAACGCAATGCGTTCCAGCTCTAGCTGGCCGGCATCGAACTTGGACAAGTCAAGAATATCGTTCAGCAGCTCTACCAGCACCTTGCCCGAGTCATGGGCGATAGCCAGt > 6:54663/1‑116 (MQ=255) ccATGTCGAACGCAATGCGTTCCAGCTCTAGCTGGCCGGCATCGAACTTGGACAAGTCAAGAATATCGTTCAGCAGCTCTACCAGCACCTTGCCCGAGTCATGGGCGATAGCCAGTTGCTGGCGTTGCTCGCTGGGCAGCGGGTTGTcc < 1:309486/149‑1 (MQ=255) ccATGTCGAACGCAATGCGTTCCAGCTCTAGCTGGCCGGCATCGAACTTGGACAAGTCAAGAATATCGTTCAGCAGCTCTACCAGCACCTTGCCCGAGTCATGGGCGATAGCCAGTTGCTGGCGTTGCTCGCTGGGCAGCGGGGTGTc > 6:221946/1‑148 (MQ=255) cATGTCGAACGCAATGCGTTCCAGCTCTAGCTGGCCGGCATCGAACTTGGACAAGTCAAGAATATCGTTCAGCAGCTCTACCAGCACCTTGCCCGAGTCATGGGCGATAGCCAGTTGCTg > 5:2549/1‑120 (MQ=255) cATGTCGAACGCAATGCGTTCCAGCTCTAGCTGGCCGGCATCGAACTTGGACAAGTCAAGAATATCGTTCAGCAGCTCTACCAGCACCTTGCCCGAGTCATGGGCGATAGCCAGTTGCTg < 6:2549/120‑1 (MQ=255) cATGTCGAACGCAATGCGTTCCAGCTCTAGCTGGCCGGCATCGAACTTGGACAAGTCAAGAATATCGTTCAGCAGCTCTACCAGCACCTTGCCCGAGTCATGGGCGATAGCCAGTTGCTGGCGTTGCTCGCTGGGCAGCGGGTTGTc > 8:208323/1‑147 (MQ=255) aTGTCGAACGCAATGCGTTCCAGCTCTAGCTGGCCGGCATCGAACTTGGACAAGTCAAGAATATCGTTCAGCAGCTCTACCAGCACCTTGCCCGAGTCATGGGCGATAGCCAGTTGCTGGCGTTGCTCGCTGGGCAGCGGGTTGTCCAg > 2:37864/1‑149 (MQ=255) aTGTCGAACGCAATGCGTTCCAGCTCTAGCTGGCCGGCATCGAACTTGGACAAGTCAAGAATATCGTTCAGCAGCTCTACCAGCACCTTGCCCGAGTCATGGGCGATAGACAGTTGCTGGCGTTGCTCGGTGGGCAGCGGGTTGTCCAg > 8:134949/1‑149 (MQ=255) gTCGAACGCAATGCGTTCCAGCTCTAGCTGGCCGGCATCGAACTTGGACAAGTCAAGAATATCGTTCAGCAGCTCTACCAGCACCTTGCCCGAGTCATGGGCGATAGCCAGTTGCTGGCGTTGCTCGCTGGGCAGCGGGTTGTCCAgcg > 2:142918/1‑149 (MQ=255) tggAACGCATTGCGTTCCAGCTCTAGCTGGCCGGCATCGAACTTGGACAAGTCAAGAATATCGTTCAGCAGCTCTACCAGCACCTTGCCCGAGTCATGGGCGATAGCCAGTTGCTGGCGTTGCTCGCTGGGCAGCGGGTTGTCCa < 8:150360/143‑1 (MQ=255) tggAACGCATTGCGTTCCAGCTCTAGCTGGCCGGCATCGAACTTGGACAAGTCAAGAATATCGTTCAGCAGCTCTACCAGCACCTTGCCCGAGTCATGGGCGATAGCCAGTTGCTGGCGTTGCTCGCTGGGCAGCGGGTTGTCCa > 7:150360/3‑145 (MQ=255) tCGAACGCAATGCGTTCCAGCTCTAGCTGGCCGGCATCGAACTTGGACAAGTCAAGAATATCGTTCAGCAGCTCTACCAGCACCTTGCCCGAGTCATGGGCGATAGCCAGTTGCTGGCGTTGCTCGCTGGACAACCCGCTGCCCAgcga < 2:36752/149‑2 (MQ=255) gAACGCAATGCGTTCCAGCTCTAGCTGGCCGGCATCGAACTTGGACAAGTCAAGAATATCGTTCAGCAGCTCTACCAGCACCTTGCCCGAGTCATGGGCGATAGCCAGTTGCTGGCGTTGCTCGCTGGGCAGCGGGTTGTCCAgcgc > 6:54260/1‑147 (MQ=255) aaCGCAATGCGTTCCAGCTCTAGCTGGCCGGCATCGAACTTGGACAAGTCAAGAATATCGTTCAGCAGCTCTACCAGCACCTTGCCCGAGTCATGGGCGATAGCCAGTTGCTGGCGTTGATCGCTGGGCAGCGGGTTGTCCAGCGCCAg > 8:290014/1‑149 (MQ=255) cGCAATGCGTTCCAGCTCTAGCTGGCCGGCATCGAACTTGGACAAGTCAAGAATATCGTTCAGCAGCTCTACCAGCACCTTGCCCGAGTCATGGGCGATAGCCAGTTGCTGGCGTTGCTCGCTGGGCAGCGGGTTGTCCAGCGCCAggg < 1:142918/149‑1 (MQ=255) aaTGCGTTCCAGCTCTAGCTGGCCGGCATCGAACTTGGACAAGTCAAGAATATCGTTCAGCAGCTCTACCAGCACCTTGCCCGAGTCATGGGCGATAGCCAGTTGCTGGCGTTGCTCGCTTGGCAGCGGGTTGTCCAGCGCCAGGGCGa < 6:237219/149‑1 (MQ=255) aaTGCGTTCCAGCTCTAGCTGGCCGGCATCGAACTTGGACAAGTCAAGAATATCGTTCAGCAGCTCTACCAGCACCTTGCCCGAGTCATGGGCGATAGCCAGTTGCTGGCGTTGCTCGCTGGGCAGCGGGTTGTCCAGCGCCAGGGCGa > 7:6979/1‑149 (MQ=255) aaTGCGTTCCAGCTCTAGCTGGCCGGCATCGAACTTGGACAAGTCAAGAATATCGTTCAGCAGCTCTACCAGCACCTTGCCCGAGTCATGGGCGATAGCCAGTTGCTGGCGTTGCTCGCTGGGCAGCGGGTTGTCCAGCGCCAGGGCGa > 3:251189/1‑149 (MQ=255) | TGACGATCTGCCGCACACGCGTGGGGTCGCCGAGCACGCTGCTGGGGAAGTCGCTGGCGATCAGGCAGGTCAGCTCCACACTTTGCGCGGTGTTCTGCGACAGCAGGTTGGCGGTGTCTTCCACCATCGAGCCCATGTCGAACGCAATGCGTTCCAGCTCTAGCTGGCCGGCATCGAACTTGGACAAGTCAAGAATATCGTTCAGCAGCTCTACCAGCACCTTGCCCGAGTCATGGGCGATAGCCAGTTGCTGGCGTTGCTCGCTGGGCAGCGGGTTGTCCAGCGCCAGGGCGA > NC_002947/2098614‑2098907 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |