| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,707,050 | A→C | 8.7% | intergenic (+19/+28) | PP_2369 → / ← PP_2370 | leucine‑rich repeat‑containing protein/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,707,050 | 0 | A | C | 8.7% | 189.8 / 5.4 | 67 | intergenic (+19/+28) | PP_2369/PP_2370 | leucine‑rich repeat‑containing protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (38/23); new base C (2/4); total (40/27) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.11e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
ATCGAAAACGCTGAGTGATGGCGACTATTTTGCCCAGGTCGAGCATATCTGCGCAGCGCGTGAGGTCGCGAAACGGCAGCTTTTGCTTGAGTTGAGCCGTGAGGCAATCCAGCGCCACGGCCTGTGAACGAAACAGCCCGCCGAGAGGCGGGCTGTTCGCTGGGGCGGGACGATCAGCGGCGGCGGAACAGCGGCAGCGGTTCGTCGGTGGCGGCCTGGTAGGTCACCGAGAAGTCCTTCAGGCTTTGCAGCGCGTCTTCCGGGTCCTTGTCGGCACGGATGGCGAATGCG > NC_002947/2706905‑2707195 | aTCGAAAACGCTGAGTGATGGCGACTATTTTGCCCAGGTCGAGCATATCAGCGCAGCGCGTGAGGTCGCGAAACGGCAGCTTTTGCTTGAGTTGAGCCGTGAGGCAATCCAGCGCCACGGCCTGTGAACGAAACAGCCCGCCGAGAGGc < 5:100749/149‑1 (MQ=255) gAAAACTCTCAGTGATTGCGACTATTTTGCACAGGTCGAGCATATCTGCGCAGCGCGTGAGGTCGCGAAACGGCAGCTTTTTCTTGAGTTGAGCCGTGAGGCAATCCAGCGCCACGGCCTGTGAACGAAACAGCCCGCCGAGAGGCggg < 2:273883/149‑1 (MQ=255) gAAAACGCTGAGTGATGGCGACTATTTTGCCCAGGTCGAGCATATCTGCGCAGCGCGTGAGGTCGCGAAACGGCAGCTTTTGCTTGAGTTGAGCCGTGAGGCAATCCAGCGCCACGGCCTGTGAACGAAACAGCCCGCCGAGAGGCggg > 5:21084/1‑149 (MQ=255) cGCTGAGTGATGGCGACTATTTTGCCCAGGTCGAGCCTATCTGCGCAGCGCGTGAGGTCGCGAAACGGCAGCTTTTGCTTGAGTTGAGCCGTGAGGCAATCCAGCGCCACGGCCTGTGAACGAAACAGCCCGCCGAGAGGCGGGCTGtt < 5:310321/149‑1 (MQ=255) cGCTGAGTGATGGCGACTATTTTGCCCAGGTCGAGCATATCTGCGCAGCGCGTGAGGACGCGAAACGGCAGCTTTTGCTTGAGTTGAGCCGTGAGGCAATCCAGCGCCACGGCCTGTGAACGAAACAGCCCGCCGAGAGGCGGGCTGtt < 2:67452/149‑1 (MQ=255) gCTGAGTGATGGCGACTATTTTGCACAGGTCGAGCATATCTGCGCAGCGCGTGAGGTCGCGAAACGGCAGCTTTTGCTTGAGTTGAGCCGTGAGGCAATCCAGAGCCACGGCCTGTGAACGAAACAGCCCGCCGAGAGGAGGGCTGTTc > 7:282764/1‑149 (MQ=255) aGTGATGGCGACTATTTTGCCCAGGTCGAGCATATCTGCGCAGCGCGTGAGGTCGCGAAACGGCAGCTTTTGCTTGAGTTGAGCCGTGAGGCAATCCAGCGCCACGGCCTGTGAACGAAACAGCCCGCCTCTCGGCGGGCTGtttcgtt < 1:155785/149‑6 (MQ=255) gATGGCGACTATTTTGCCCAGGTCGAGCATATCTGCGCAGCGCGTGAGGTCGCGAAACGGCAGCTTTTGCTTGAGTTGAGCCGTGAGGCAATCCAGCGCCACGGCCTGTGAACGAAACAGCCCGCCGAGAGGCGGGCTGTTCGCTgggg > 6:137116/1‑149 (MQ=255) aTGGCTACTATTTTGCCCAGGTCGCGCATATCTGCGCAGCGCGTGAGGTCGCTAAACGGCAGCTTTTGCTTGAGTTGAGCCGTGAGGCAATCCAGCGCCACGGCCTGTGAACGAAACAGCCCGCCGAGAGGCGGGCTGTTCGCTgggg < 8:271258/148‑1 (MQ=255) ggCGACTATTTTGCCCAGGTCGAGCATATCTGCGCAGCGCGTGAGGTCGCGAAACGGCAGCTTTTGCTTGAGTTGAGCCGTGAGGCAATCCAGCGCCACGGCCTGTGAACGAAACAGCCCGCCGAGAGGCGGGCTGTTCGCTGGGGCgg > 4:51139/1‑149 (MQ=255) gCGACTATTTTGCCCAGGTCGAGCATATCTGCGCAGCGCGTGAGGTCGCGAAACGGCAGCTTTTGCTTGAGTTGAGCCGTGAGGCAATCCAGCGCCACGGCCTGTGAACGAAACAGCCCGCCGAGAGGCGGGCTGTTCGCTGGGGCgg < 6:21084/148‑1 (MQ=255) gACTATTTTGCCCAGGTCGAGCATATCTGCGCAGCGCGTGAGGTCGCGAAACGGCAGCTTTTGCTTGAGTTGAGCCGTGAGGCAATCCAGCGCCACGGCCTGTGAACGAAACAGCCCGCCTCTCGGCGGGCTGtttcgtt > 7:113180/1‑135 (MQ=255) gACTATTTTGCCCAGGTCGAGCATATCTGCGCAGCGCGTGAGGTCGCGAAACGGCAGCTTTTGCTTGAGTTGAGCCGTGAGGCAATCCAGCGCCACGGCCTGTGAACGAAACAGCCCGCCTCTCGGCGGGCTGtttcgtt < 8:113180/140‑6 (MQ=255) gACTATTTTGCCCAGGTCGAGCATATCTGCGCAGCGCGTGAGGTCGCGAAACGGCAGCTTTTGCATGAGTTGAGCCGTGAGGCAATCCAGCGCCACGGCCTGTGAACGAAACAGCCCGCCGAGAGGCGGGCTGTTCGCTCGGGCGGGAc > 5:150161/1‑149 (MQ=255) aCTATTTTGCCCAGGTCGAGCATATCTGCGCAGCGCGTGAGGTCGCGAAACGGCAGCTTTTGCTTGAGTTGAGCCGTGAGGCAATCCAGCGCCACGGCCTGTGAACGAAACAGCCCGCCGAGAGGCGGGCTGTTCGCTGGGGCGGGAc > 1:130163/1‑148 (MQ=255) aCTATTTTGCCCAGGTCGAGCATATCTGCGCAGCGCGTGAGGTCGCGAAACGGCAGCTTTTGCTTGAGTTGAGCCGTGAGGCAATCCAGCGCCACGGCCTGTGAACGAAACAGCCCGCCGAGAGGCGGGCTGTTCGCTGGGGCGGGAc > 5:315164/1‑148 (MQ=255) ttttGCCCAGGTCGAGCATATCTGCGCAGCGCGTGAGGTCGCGAAACGGCAGCTTTTGCTTGAGTTGAGCCGTGAGGCAATCCAGCGCCACGGCCTGTGAACGAAACAGCCCGCCGAGAGGCGGGCTGTTCGCTGGGGCGGGACGAt > 1:321484/1‑147 (MQ=255) ccAGGTCGAGCATATCTGCGCAGCGCGTGAGGTCGCGAAACGGCAGCTTTTGCTTGAGTTGAGCCGTGAGGCAATCCAGCGCCACGGCCTGTGAACGAAACAGCCCGCCGAGAGGCGGGCTGTTCGCTGGGGCGGGACGATCAgcggcg > 6:171077/1‑149 (MQ=255) ccAGGTCGAGCATATCTGCGCAGCACGTGAGGTCGCGAAACGGCAGCTTTTGCTTGAGTTGAGCCGTGAGGCAATCCAGCGCCACGGCCTGTGAACGAAACAGCCCGCCGAGAGGCGGGCTGTTCGCTGGGGCGGGACGATCAgcggcg > 7:46576/1‑149 (MQ=255) gAGCTTATCTGCGCAGCGCGTGAGGTCGCGAAACGGCAGCTTTTGCTTGAGTTGAGCCGTGAGGCAATCCAGCGCCACGGCCTGTGAACGAAACAGCCCGCCGAGAGGCGGGCTGTTCGCTGGGGCGGGACGATCAGCGGCGGCGGaa < 3:236509/148‑1 (MQ=255) gAGCATATCTGCGCAGCGCGTGAGGTCGCGAAACGGCAGCTTTTGCTTGAGTTGAGCCGTGAGGCAATCCAGCGCCACGGCCTGTGAACGAAACAGCCCGCCGAGAGGCGGGCTGTTCGCTGGGGCGGGACGATCAGCGGCGGCGGaa > 8:278394/1‑148 (MQ=255) gCATATCTGCGCAGCGCGTGAGGTCGCGAAACGGCAGCTTTTGCTTGAGTTGAGCCGTGAGGCAATCCAGCGCCACGGCCTGTTAACGAAACAGCCCGCCTATAGGCGGGCTGTTCGCTGGGGCGGGACTATCAGCGGCGGCGGAAcag < 5:137116/149‑1 (MQ=255) gCATATCTGCGCAGCGCGTGAGGTCGCGAAACGGCAGCTTTTGCTTGAGTTGAGCCGTGAGGCAATCCAGCGCCACGGCCTGTGAACGAAACAGCCCGCCGAGAGGCGGGCTGTTCGCTGGGGCGGGACGCTCAGCGGCGGCGGAAcag > 4:125302/1‑149 (MQ=255) aatatCGGCGCAGGGCGTGAGGTCGCTAAACGGCAGCTTTTGCTTTAGTGGAGCCGTGAGGCAATCCAGCGCCACGGCCTGTTAACGAAACAGCCCGCCGAGAGGCGGGCTGTTCGCTGGGGCGGGACGATCAGCGGCGGCGGAAcagc < 2:321484/148‑1 (MQ=255) tatCTGCGCAGCGCGTGAGGTCGCGAAACGGCAGCTTTTGCTTGAGTTGAGCCGTGAGGCAATCCAGCGCCACGGCCTGTGAACGAAACAGCCCGCCGAGAGGCGGGCTGTTCGCTGGGGCGGGACGATCAGCGGCGGCGGAAcagcgg > 7:278757/1‑149 (MQ=255) tCTGCGCAGCGCGTGAGGTCGCGAAACGGCAGCTTTTGCTTGAGTTGAGCCGTGAGGCAATCCAGCGCCACGGCCTGTGAACGAAACAGCCCGCCGAGAGGCGGGCTGTTCGCTGGGGCGGGACGATCAGCGGCGGCGGAAcagcgg > 2:14548/1‑147 (MQ=255) gcAGCGCGTGAGGTCGCGAAACGGCAGCTTTTGCTTGAGTTGAGCCGTGAGGCAATCCAGCGCCACGGCCTGTGAACGAAACAGCCCGCCGAGAGGCGGGCTGTTCGCTGGGGCGGGAGGATCAGCGGCGGCGGAACAGCGGCAGCGGt > 7:109736/1‑149 (MQ=255) gcgcGTGAGGTCGCCAAACGGCAGCTTTTGCTTGAGTTGAGCCGTGAGGCAATCCAGCGCCACGGCCTGTGAACGAAACAGCCCGCCGAGAGGCGGGCTGTTCGCTGGGGAGGGACGATCAGCTGCGGCGGAACAGCGGCAGCGGTtcg > 7:238537/1‑149 (MQ=255) cgcgTGAGGTCGCGAAACGGCAGCTTTTGCTTGAGTTGAGCCGTGAGGCAATCCAGCGCCACGGCCTGTGAACGAAACAGCCCGCCGAGAGGCGGGCTGTTCGCTGGGGCGGGACGATCAGCGGCGGCGGAACAGCGGCAGCGGTtcgt > 8:175845/1‑149 (MQ=255) gTCGCGAAACGGCAGCTTTTGCTTGAGTTGAGCCGTGAGGCAATCCAGCGCCACGGCCTGTGAACGAAACAGCCCGCCGAGAGGCGGGCTGTTCGCTGGGGCGGGACGATCAGCGGCGGCGGAACAGCGGCAGCGGTTCGTCGGTggcg < 8:278757/149‑1 (MQ=255) gcgAAACGGCAGCTTTTGCTTGAGTTGAGCCGTGAGGCAATCCAGCGCCACGGCCTGTGAACGAAACAGCCCGCCGAGAGGCGGGCTGTTCGCTGGGGCGGGACGATCAGCGGCGGCGGAACAGCGGCAGCGGTTCGTCGGTGGCGGcc < 7:175845/149‑1 (MQ=255) gAAACGGCAGCTTTTGCTTGAGTTGAGCCGTGAGGCAATCCAGCGCCACGGCCTGTGAACGAAACAGCCCGCCGAGAGGCGGGCTGTTCGCTGGGGCGGGACGATCAGCGGCGGCGGAACAGCGGCAGCGGTTCGTCGGTGGCGGCCTg > 1:301644/1‑149 (MQ=255) aaCGGCAGCTTTTGCTTGAGTTGAGCCGTGAGGCAATCCAGCGCCACGGCCTGTGAACGAAACAGCCCGCCGAGAGGCGGGCTGTTCGCTGGGGCGGGACGATCAGCGGCGGCGGAACAGCGGCAGCGGTTCGTCGGTGGCGGCCTGGt < 5:171077/149‑1 (MQ=255) gaaGCTTTTGCTTGAGTTGAGCCGTGAGGCTATCCAGCGCCAGGGCCTGTGAACTAAACAGGCCGCCGTGAGGCGGGCTGTTCGCTGGGGCGGGACGATCATCGGCGGCTGAACAGCGGCAGCGGTTCGTCGGTGGCGGCCTGGTAGGt < 8:282764/147‑1 (MQ=255) gCAGATTTTGCTTGAGTTGAGCCGTGAGGCAATCCAGCGCCACGGCCTGTGAACGAAACAGCCCGCCGAGAGGCGGGCTGTTCGCTGGGGCGGGACGATCAGCGGCGGCGGAACAGCGGCAGCGGTTCGTCGGTGGCGGCCTGGTAGGt > 8:271251/1‑149 (MQ=255) gCTTTTGCTTGAGTTGAGCCGTGAGGCAATCCAGCGCCACGGCCTGTGAACGAAACAGCCCGCCGAGAGGCGGGCTGTTCGCTGGGGCGGGACGATCAGCGGCGGCGGAACAGCGGCAGCGGTTCGTCGGTGGCGGCCTGGTAGGTCAc > 4:211311/1‑149 (MQ=255) gCTTTTGCTTGAGTTGAGCCGTGAGGCAATCCAGCGCCACGGCCTGTGAACGAAACAGCCCGCCGAGAGGCGGGCTGTTCGCTGGGGCGGGACGATCAGCGGCGGCGGAACAGCGGCAGCGGTTCGTCGGTGGCGGCCTGGTAGGTCAc < 8:88470/149‑1 (MQ=255) gCTTTTGCTTGAGTTGAGCAGTGAGGCAATCCAACGCCACGGCCTGTGAACGAAACAGCCCGCCGAGAGGCGGGCTGTTCGCTGGGGCGGGACGATCAGCGGCGGCGGAACAGCGGCAGCGGTTCGTCGGTGGCGGCCTGGTAGGTCAc > 4:273529/1‑149 (MQ=255) cTTGAGTTGAGCCGTGAGGCAATCCAGCGCCACGGCCTGTGAACGAAACAGCCCGCCGAGAGGCGGGCTGTTCGCTGGGGCGGGACGATCAGCGGCGGCGGAACAGCGGCAGCGGTTCGTCGGTGGCGGCCTGGTAGGTCACCGAGaa < 5:196407/148‑1 (MQ=255) cTTGAGTTGAGCCGTGAGGCAATCCAACGCCACGGCCTGTGAACGAAACAGCCCGCCGAGAGGCGGGCTGTTCGCTGGGGCGGGACGATCAGCGGCGGCGGAACAGCGGCAGCGGTTCGTCGGTGGCGGCCTGGTAGGTCACCGAGaa < 3:273529/148‑1 (MQ=255) ccGTGAGGCAATCCAGCGCCACGGCCTGTGAACGAAACAGCCCGCCGAGAGGCGGGCTGTTCGCTGGGGCGGGACGATCAGCGGCGGCGGAACAGCGGCAGCGGTTCGTCGGTGGCGGCCTGGTAGGTCACCGAGAAGTCCTTCAGGCt > 8:94740/1‑149 (MQ=255) cGTGAGGCAATCCAGCGCCACGGCCTGTGAACGAAACAGCCCGCCGAGAGGCGGGCTGTTCGCTGGGGCGGGACGATCAGCGGCGGCGGAAc > 3:155984/1‑92 (MQ=255) cGTGAGGCAATCCAGCGCCACGGCCTGTGAACGAAACAGCCCGCCGAGAGGCGGGCTGTTCGCTGGGGCGGGACGATCAGCGGCGGCGGAACAGCGGCAGCGGTTCGTCGGTGGCGGCCTGGTAGGTCACCGAGAAGTCCTTCAGGCtt > 5:229761/1‑149 (MQ=255) tGAGGCAATCCAGCGCCACGGCCTGTGAACGAAACAGCCCGCCGAGAGGCGGGCTGTTCGCTGGGGCGGGACGATCAGCGGCGGCGGAACAGCGGCAGCGGTTCGTCGGTGGCGGCCTGGTAGGTCACCGAGAAGTCCTTCAGGCTTTg > 2:215965/1‑149 (MQ=255) tGAGGCAATCCAGCGCCACGGCCTGTGAACGAAACAGCCCGCCGAGAGGCGGGCTGTTCGCTGGGGCGGGACGATCAGCGGCGGCGGAACAGCGGCAGCGGTTCGTCGGTGGCGGCCTGGTAGGTCACCGAGAAGTCCTTCAGGCTTTg < 3:51139/149‑1 (MQ=255) gCAATCCAGCGCCACGGCCTGTGAACGAAACAGCCCGCCGAGAGGCGGGCTGTTCGCTGGGGCGGGACGATCAGCGGCGGCGGAACAGCGGCAGCGGTTCGTCGGTGGCGGCCTGGTAGGTCACCGAGAAGTCCTTCAGGCTTTGCAgc > 4:150296/1‑149 (MQ=255) ccAGCGCCACGGCCTGTGAACGAAACAGCCCGCCGAGAGGCGGGCTGTTCGCTGGGGCGGGACGATCAGCGGCGGCGGAACAGCGGCAGCGGTTCGTCGGTGGCGGCCTGGTAGGTCACCGAGAAGTCCTTCAGGCTTTGCAGCGCGTc > 1:176285/1‑149 (MQ=255) aGCGCCACGGCCTGTGAACGAAACAGCCCGCCGAGAGGCGGGCTGTTCGCTGGGGCGGGACGATCAGCGGCGGCGGAACAGCGGCAGCGGTTCGTCGGTGGCGGCCTGGTAGGTCACCGAGAAGTCCTTCAGGCTTTGCAGCGCGTCtt > 3:18325/1‑149 (MQ=255) cgagggCCTGTGAACGAAACAGCCCGCCGAGCGGCGGGCTGTTCGCTGGGTCTGGACGATCAGCGGCGGCTGAACAGCGTCAGCGGTTCGTCGTTGGCGGCCTGGTAGGTCACGGAGAAGTCCTTCAGGCTTTGCAGCGCGTCTTCCgt < 5:227113/145‑2 (MQ=255) ccACGGCCTGTGAACGAAACAGCCCGCCGAGAGGCGGGCTGTTCGCTGGGGCGGGACGATCAGCGGCGGCGGAACAGCGGCAGCGGTTCGTCGGTGGCGGCCTGGTAGGTCACCGAGAAGTCCTTCAGGCTTTGCAGCGCGTCTTCCgg < 6:241692/149‑1 (MQ=255) ccACGGCCTGTGAACGAAACAGCCCGCCGAGAGGCGGGCTGTTCGCTGGGGCGGGACGATCAGCGGCGGCGGAACAGCGGCAGCGGTTCGTCGGTGGCGGCCTGGTAGGTCACCGAGAAGTCCTTCAGGCTTTGCAGCGCGTCTTCCgg > 5:241692/1‑149 (MQ=255) cACGGCCTGTGAACGAAACAGCCCGCCGAGAGGCGGGCTGTTCGCTGGGGCGGGACGATCAGCGGCGGCGGAACAGCGGCAGCGGTTCGTCGGTGGCGGCCTGGTAGGTCACCGAGAAGTCCTTCAGGCTTTGCAGCGCGTCTTCCggg > 3:109882/1‑149 (MQ=255) tgAACGAAACAGCCCGCCGAGAGGCGGGCTGTTCGCTGGGGCGGGACGATCAGCGGCGGCGGAACAGCGGCAGCGGTTCGTCGGTGGCGGCCTGGTAGGTCACCGAGAAGTGCTTCATGCTTTGCAGCGCGTCTTCCGGGTCCTTGt < 8:46576/147‑1 (MQ=255) tgAACGAAACAGCCCGCCGAGAGGCGGGCTGTTCGCTGGGGCGGGACGATCAGCGGCGGCGGAACAGCGGCAGCGGTTCGTCGGTGGCGGCCTGGTAGGTCACCGAGAAGTCCTTCAGGCTTTGCAGCGCGTCTTCCGGGTCCTTGTc < 1:215965/148‑1 (MQ=255) aaCGAAACAGCCCGCCGAGAGGCGGGCTGTTCGCTGGGGCGGGACGATCAGCGGCGGCGGAACAGCGGCAGCGGTTCGTCGGTGGCGGCCTGGTAGGTCACCGAGAAGTCCTTCAGGCTTTGCAGCGCGTCTTCCGGGTCCTTGTCgg > 3:272747/1‑148 (MQ=255) aaCGAAACAGCCCGCCGAGAGGCGGGCTGTTCGCTGGGGCGGGACGATCAGCGGCGGCGGAACAGCGGCAGCGGTTCGTCGGTGGCGGCCTGGTAGGTCACCGAGAAGTCCTTCAGGCTTTGCAGCGCGTCTTCCGGGTCCTTGTCgg > 1:77853/1‑148 (MQ=255) aaCGAAACAGCCCGCCGAGAGGCGGGCTGTTCGCTGGGGCGGGACGATCAGCGGCGGCGGAACAGCGGCAGCGGTTCGTCGGTGGCGGCCTGGTAGGTCACCGAGAAGTCCTTCAGGCTTTGCAGCGCGTCTTCCGGGTCCTTGTCgg < 2:301644/148‑1 (MQ=255) aCGAAACAGCCCGCCGAGAGGCGGGCTGTTCGCTGGGGCGGGACGATCAGCGCCGGCGGAACAGCGGCAGCGGTTCGTCGGTGGCGGCCTGGTAGGTCACCGAGAAGTCCTTCAGGCTTTGCAGCGCGTCTTCCGGGTCCTTGTCGGCa > 2:209472/1‑149 (MQ=255) aaCAGCCCGCCTCTCGGCGGGCTGTTCGCTGGGGCGGGACGATCAGCGGCGGCGGAACAGCGGCAGCGGTTCGTCGGTGGCGGCCTGGTAGGTCACCGAGAAGTCCTTCAGGCTTTGCAGCGCGTCTTCCGGGTCCTTGTCGGCAc < 4:134675/146‑1 (MQ=255) aaCAGCCCGCCTCTCGGCGGGCTGTTCGCTGGGGCGGGACGATCAGCGGCGGCGGAACAGCGGCAGCGGTTCGTCGGTGGCGGCCTGGTAGGTCACCGAGAAGTCCTTCAGGCTTTGCAGCGCGTCTTCCGGGTCCTTGTCGGCAc > 3:134675/1‑146 (MQ=255) aaCAGCCCGCCGAGAGGCGGGCTGTTCGCTGGGGCGGGACGATCAGCGGCGGCGGAACAGCGGCAGCGGTTCGTCGGTGGCGGCCTGGTAGGTCACCGAGAAGTCCTTCAGGCTTTGCAGCGCGTCTTCCGGGTCCTTGTCGGCACGGa > 3:40584/1‑149 (MQ=255) aaCAGCCCGCCGAGAGGCGGGCTGTTCGCTGGGGCGGGACGATCAGCGGCGGCGGAACAGCGGCAGCGGTTCGTCGGTGGCGACCTGGTAGGTCACCGAGAAGTCCTTCAGGCTTTGCAGCGCGTCTTCCGGGTCCTTGTCGGCACGGa > 5:14006/1‑149 (MQ=255) cccGCCGAGAGGCGGGCTGTTCGCTGGGGCGGGACGATCAGCGGCGGCGGAACAGCGGCAGCGGTTCGTCGGT‑GCGGCCTGGTAGGTCACCGAGAAGTCCTTCAGGCTTTGCAGCGCGTCTTCCGGGTCCTTGTCGGCACGGATGGCg > 6:190259/1‑148 (MQ=255) ccgccgAGAGGCGGGCTGTTCGCTGGGGCGGGACGATCAGCGGCGGCGGAACAGCGGCAGCGGTTCGTCGGTGGCGGCCTGGTAGGTCACCGAGAAGTCCTTCAGGCTTTGCAGCGCGTCTTCCGGGTCCTTGTCGGCACGGATGGCg > 6:258545/1‑148 (MQ=255) gccgAGAGGCGGGCTGTTCGCTGGGGCGGGACGATCAGCGGCGGCGGAACAGCGGCAGCGGTTCGTCGGTGGCGGCCTGGTAGGTCACCGAGAAGTCCTTCAGGCTTTGCAGCGCGTCTTCCGGGTCCTTGTCGGCACGGATGGCGAAt > 8:154046/1‑149 (MQ=255) gccgAGAGGCGGGCTGTTCGCTGGGGCGGGACGATCAGCGGCGGCGGAACAGCGGCAGCGGTTCGTCGGTGGCGGCCTGGTAGGTCACCGAGAAGTCCTTCAGGCTTTGCAGCGCGTCTTCCGGGTCCTTGTCGGCACGGATGGCGAAt < 2:176285/149‑1 (MQ=255) gccgAGAGGCGGGCTGTTCGCTGGGGCGGGACGATCAGCGGCGGCGGAACAGCGGCAGCGGTTCGTCGGTGGCGGCCTGGTAGGTCACCGAGAAGTCCTTCAGGCTTTGCAGCGCGTCTTCCGGGTCCTTGTCGGCACGGATGGCGAAt < 1:14548/149‑1 (MQ=255) gagaGGCGGGGTGTTCGCTGGGGCGGGACGATCAGCGGCGGCGGAACAGCGGCAGCGGTTCGTCGGTGGCGGCCTGGTAGGTCACCGAGAAGTCCTTCAGGCTTTGCAGCGCGTCTTCCGGGTCCTTGTCGGCACGGATGGCGAATGCg < 6:150161/149‑1 (MQ=255) gagaGGCGGGCTGTTCGCTGGGGCGGGACGATCAGCGGCGGCGGAACAGCGGCAGCGGTTCGTCGGTGGCGACCTGGTAGGTCACCGAGAAGTCCTTCAGGCTTTGCAGCGCGTCTTCCGGGTCCTTGTCGGCACGGATGGCGAATGCg < 6:14006/149‑1 (MQ=255) | ATCGAAAACGCTGAGTGATGGCGACTATTTTGCCCAGGTCGAGCATATCTGCGCAGCGCGTGAGGTCGCGAAACGGCAGCTTTTGCTTGAGTTGAGCCGTGAGGCAATCCAGCGCCACGGCCTGTGAACGAAACAGCCCGCCGAGAGGCGGGCTGTTCGCTGGGGCGGGACGATCAGCGGCGGCGGAACAGCGGCAGCGGTTCGTCGGTGGCGGCCTGGTAGGTCACCGAGAAGTCCTTCAGGCTTTGCAGCGCGTCTTCCGGGTCCTTGTCGGCACGGATGGCGAATGCG > NC_002947/2706905‑2707195 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |