Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_002947	2,902,772	C→T	6.0%	R618R (CGC→CGT)	quiC →	3‑dehydroshikimate dehydratase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_002947	2,902,772	0	C	T	6.0%	194.1 / 2.1	66	R618R (CGC→CGT)	quiC	3‑dehydroshikimate dehydratase
Reads supporting (aligned to +/- strand):  ref base C (35/27);  new base T (2/2);  total (37/29)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.68e-01

TACAACGTGCTGTATGACCGCGACGCTCAAGGTGGCGAGCTGTTCCACGTCTATACCGAGCCGTTCGAGGAGCGTTTCTTCTTCGAGATCA‑TCCAGCGCAAGGCGGGGTACGCTGGTTACGGCGCTGCCAACGTTGCGGTGCGCCTGGCAGCCATGGCCAAGGCCCGTAGCGGGGCGGCGCGCAAGCCGGTGCTGTAGTCGCCTGCACCGGCCTGTCTTGTGGGAGTGGGGTGAACCCTGCTTCCACAGGATTATTACGGCCCGATTCAGTGACGCTCAGCCACCA  >  NC_002947/2902629‑2902914                                                                                                                                                 |                                                                                                                                               tacAACGTGCTGTATGACCGCGACGCTCAAGGTGGCGAGCTGTTCCACGTCTATACCGAGCCGTTCGAGGAGCGTTTCTTCTTCGAGATCA‑TCCAGCGCAAGGCGGGGTACGCTGGTTACGGCGCTGCCAACGTTGCGGTGCGCCTgg                                                                                                                                            >  4:67933/1‑148 (MQ=255) tacAACGTGCTGTATGACCGCGACGCTCAAGGTGGCGAGCTGTTCCACGTCTATACCGAGCCGTTCGAGGAGCGTTTCTTCTTCGAGATCA‑TCCAGCGCAAGGCGGGGTACGCTGGTTACGGCGCTGCCAACGTTGCGGTGCGCCTgg                                                                                                                                            >  7:42868/1‑148 (MQ=255)   cAACGTGCTGTATGACCGCGACGCTCAAGGTGGCGAGCTGTTCCACGTCTATACCGAGCCGTTCGAGGAGCGTTTCTTCTTCGAGATCA‑TCCAGCGCAAGGCGGGGTACGCTGGTTACGGCGCTGCCAACGTTGCGGTGCGCCTGGCAg                                                                                                                                         >  5:164333/1‑149 (MQ=255)   cAACGTGCTGTATGACCGCGACGCTCAAGGTGGCGAGCTGTTCCACGTCTATACCGAGCCGTTCGAGGAGCGTTTCTTCTTCGAGATAA‑TCCAGCGCAAGGCGGGGTACGCTGGTTACGGCGCTGACAACGTTGCGGTGCGCCTGGCAg                                                                                                                                         >  3:87002/1‑149 (MQ=255)          cTGTATGACCGCGACGCTCAAGGTGGCGAGCTGTTCCACGTCTATACCGAGCCGTTCGAGGAGCGTTTCTTCTTCGAGATCA‑TCCAGCGCAAGGCGGGGTACGCTGGTTACGGCGCTGCCAACGTTGCGGTGCGCCTGGCAGCCATGGc                                                                                                                                  >  7:96782/1‑149 (MQ=255)                gACCGCGACGCTCAAGGTGGCGAGCTGTTCCACGTCTATACCGAGCCGTTCGAGGAGCGTTTCTTCTTCGAGATCA‑TCCAGCGCAAGGCGGGGTACGCTGGTTACGGCGCTGCCAACGTTGCGGTGCGCCTGGCAGCCATGGcc                                                                                                                                 <  4:235019/144‑1 (MQ=255)                gACCGCGACGCTCAAGGTGGCGAGCTGTTCCACGTCTATACCGAGCCGTTCGAGGAGCGTTTCTTCTTCGAGATCA‑TCCAGCGCAAGGCGGGGTACGCTGGTTACGGCGCTGCCAACGTTGCGGTGCGCCTGGCAGCCATGGcc                                                                                                                                 >  3:235019/1‑144 (MQ=255)                   cgcgACGCTCAAGGTGGCGAGCTGTTCCACGTCTATACCGAGCCGTTCGAGGAGCGTTTCTTCTTCGAGATCA‑TCCAGCGCAAGGCGGGGTACGCTGGTTACGGCGCTGCCAACGTTGCGGTGCGCCTGGCAGCCATGGCCAAgg                                                                                                                             <  4:208256/145‑1 (MQ=255)                   cgcgACGCTCAAGGTGGCGAGCTGTTCCACGTCTATACCGAGCCGTTCGAGGAGCGTTTCTTCTTCGAGATCA‑TCCAGCGCAAGGCGGGGTACGCTGGTTACGGCGCTGCCAACGTTGCGGTGCGCCTGGCAGCCATGGCCAAgg                                                                                                                             >  3:208256/1‑145 (MQ=255)                   cgcgACGCTCAAGGTGGCGAGCTGTTCCACGTCTATACCGAGCCGTTCGAGGAGCGTTTCTTCTTCGAGATCA‑TCCAGCGCAAGGCGGGGTACGCTGGTTACGGCGCTGCCAACGTTGCGGTGCGCCTGGCAGCCATGGCCAAGGCCCg                                                                                                                         >  5:207198/1‑149 (MQ=255)                    gcgACGCTCAAGGTGGCGAGCTGTTCCACGTCTATACCGAGCCGTTCGAGGAGCGTTTCTTCTTCGAGATCA‑TCCAGCGCAAGGCGGGGTACGCTGGTTACGGCGCTGCCAACGTTGCGGTGCGCCTGGCAGCCATGGCCAAGGCCCg                                                                                                                         >  7:152946/1‑148 (MQ=255)                          cTCAAGGTGGCGAGCTGTTCCACGTCTATACCGAGCCGTTCGAGGAGCGTTTCTTCTTCGAGATCA‑TCCAGCGCAAGGCGGGGTACGCTGGTTACGGCGCTGCCAACGTTGCGGTGCGCCTGGCAGCCATGGCCAAGGCCCGTAGCggg                                                                                                                  <  3:67933/149‑1 (MQ=255)                           tCAAGGTGGCGAGCTGTTCCACGTCTATACCGAGCCGTTCGAGGAGCGTTTCTTCTTCGAGATCA‑TCCAGCGCAAGGCGGGGTACGCTGGTTACGGCGCTGCCAACGTTGCGGTGCGCCTGGCAGCCATGGCCAAGGccc                                                                                                                          >  5:185021/1‑140 (MQ=255)                           tCAAGGTGGCGAGCTGTTCCACGTCTATACCGAGCCGTTCGAGGAGCGTTTCTTCTTCGAGATCA‑TCCAGCGCAAGGCGGGGTACGCTGGTTACGGCGCTGCCAACGTTGCGGTGCGCCTGGCAGCCATGGCCAAGGccc                                                                                                                          <  6:185021/140‑1 (MQ=255)                           tCAAGGTGGCGAGCTGTTCCACGTCTATACCGAGCCGTTCGAGGAGCGTTTCTTCTTCGAGATCA‑TCCAGCGCAAGGCGGGGTACGCTGGTTACGGCGCTGCCAACGTTGCGGTGCGCCTGGCAGCCATGGCCAAGGCCCGTAGCgggg                                                                                                                 >  3:242144/1‑149 (MQ=255)                             aaGGTGGCGAGCTGTTCCACGTCTATACCGAGCCGTTCGAGGAGCGTTTCTTCTTCGAGATCA‑TCCAGCGCAAGGCGGGGTACGCTGGTTACGGCGCTGCCAACGTTGCGGTGCGCCTGGCAGCCATGGCCAAGGCCCGTAGCGGggc                                                                                                                <  6:207198/148‑1 (MQ=255)                              aGGTGGCGAGCTGTTCCACGTCTATACCGAGCCGTTCGAGGAGCGTTTCTTCTTCGAGCTCA‑TCCAGCGCAAGGCGGGGTACGCTGGTTACGGCGCTGCCAACGTTGCGGTGCGCCTGGCAGCCATGGCCAAGGCCCGTAGCGGggcgg                                                                                                              >  4:58009/1‑149 (MQ=255)                                   gCGAGCTGTTCCACGTCTATACCGAGCCGTTCGAGGAGCGTTTCTTCTTCGAGATCA‑TCCAGCGCAAGGCGGGGTACGCTGGTTACGGCGCTGCCAACGTTGCGGTGCGTCTGGCAGCCATGGCCAAGGCCCGTAGCGGGGCGgcgc                                                                                                           >  3:102993/1‑147 (MQ=255)                                   gCGAGCTGTTCCACGTCTATACCGAGCCGTTCGAGGAGCGTTTCTTCTTCGAGATCA‑TCCAGCGCAAGGCGGGGTACGCTGGTTACGGCGCTGCCAACGTTGCGGTGCGTCTGGCAGCCATGGCCAAGGCCCGTAGCGGGGCGgcgc                                                                                                           >  7:39333/1‑147 (MQ=255)                                   gCGAGCTGTTCCACGTCTATACCGAGCCGTTCGAGGAGCGTTTCTTCTTCGAGATCA‑TCCAGCGCAAGGCGGGGTACGCTGGTTACGGCGCTGCCAACGTTGCGGTGCGTCTGGCAGCCATGGCCAAGGCCCGTAGCGGGGCGgcgc                                                                                                           <  4:102993/147‑1 (MQ=255)                                   gCGAGCTGTTCCACGTCTATACCGAGCCGTTCGAGGAGCGTTTCTTCTTCGAGATCA‑TCCAGCGCAAGGCGGGGTACGCTGGTTACGGCGCTGCCAACGTTGCGGTGCGTCTGGCAGCCATGGCCAAGGCCCGTAGCGGGGCGgcgc                                                                                                           <  8:39333/147‑1 (MQ=255)                                       gCTGTTCCACGTCTATACCGAGCCGTTCGAGGAGCGTTTCTTCTTCGAGATCA‑TCCAGCGCAAGGCGGGGTACGCTGGTTACGGCGCTGCCAACGTTGCGGTGCGCCTGGCAGCCATGGCCAAGGCCCGTAGCGGGGCGGCGCGCAAGc                                                                                                     <  4:242144/149‑1 (MQ=255)                                          gTTCCACGTCTATACCGAGCCGTTCGAGGAGCGTTTCTTCTTCGAGATCA‑TCCAGCGCAAGGCGGGGTACGCTGGTTACGGCGCTGCCAACGTTGCGGTGCGCCTGGCAGCCATGGCCAAGGCCCGTAGCGGGGCGGCGCGCAAGCCgg                                                                                                  >  8:266767/1‑149 (MQ=255)                                           ttCCACGTCTATACCGAGCCGTTCGAGGAGCGTTTCTTCTTCGAGATCA‑TCCAGCGCAAGGCGGGGTACGCTGGTTACGGCGCTGCCAACGTTGCGGTGCGCCTGGCAGCCATGGCCAAGGCCCGTAGCGGGGCGGCGCGCAAGCCGGt                                                                                                 <  8:250359/149‑1 (MQ=255)                                             ccACGTCTATACCGAGCCGTTCGAGGAGCGTTTCTTCTTCGAGATCA‑TCCAGCGCAAGGCGGGGTACGCTGGTTACGGCGCTGCCAACGTTGCGGTGCGCCTGGCAGCCATGGCCAAGGCCCGTAGCGGGGCGGCGCGCAAGCCGGTg                                                                                                <  5:270708/148‑1 (MQ=255)                                               aCGTCTATACCGAGCCGTTCGAGGAGCGTTTCTTCTTCGAGATCAGTCCAGCGCAAGGCGGGGTACGCTGGTTACGGCGCTGCCAACGTTGCGGTGCGCCTGGCAGCCATGGCCAAGGCCCGTAGCGGGGCGGCGCGCAAGCCGGTGCt                                                                                              >  1:67446/1‑149 (MQ=255)                                                 gTCTATACCGAGCCGTTCGATGAGCGTTTCTTCTACGAGATCA‑TCCAGCGCAAGGCGGGGTACGCTGGTTACGGCGCTGACAACGTTGCGGTGCGCCTGGCAGCCATGGCCAAGGCCCGTAGCGGGGCGGCGCGCAAGCCGGTGCTg                                                                                             >  1:47723/1‑147 (MQ=255)                                                        ccGAGCCGTTCGAGGAGCGTTTCTTCTTCGAGATCA‑TCCAGCGCAAGGCGGGGTACGCTGGTTACGGCGCTGCCAACGTTGCGGTGCGCCTGGCAGCCATGGCCAAGGCCCGTAGCGGGGCGGCGCGCAAGCCGGTGCTGTAGTCGcc                                                                                     <  8:96782/148‑1 (MQ=255)                                                              cGTTCGAGGAGCGTTTCTTCTTCGAGATCA‑TCCAGCGCAAGGCGGGGTACGCTGGTTACGGCGCTGCCAACGTTGCGGTGCGCCTGGCAGCCATGGCCAAGGCCCGTAGCGGGGCGGCGCGCAAGCCGGTGCTGTAGTCGCCTGCACCg                                                                              >  4:143030/1‑149 (MQ=255)                                                               gTTCGAGGAGCGTTTCTTCTTCGAGATCA‑TCCAGCGCAAGGCGGGGTACGCTGGTTACGGCGCTGCCAACGTTGCGGTGCGCCTGGCAGCCATGGCCAAGGCCCGTAGCGGGGCGGCGCGCAAGCCGGTGCTGTAGTCGCCTGCACCgg                                                                             >  3:60540/1‑149 (MQ=255)                                                                    aggagCGTTTCTTCTTCGAGATCA‑TCCAGCGCAAGGCGGGGTACGCTGGTTACGGCGCTGCCAACGTTGCGGTGCGCCTGGCAGCCATGGCCAAGGCCCGTAGCGGGGCGGCGCGCAAGCCGGTGCTGTAGTCGCCTGCACCGGCCTGt                                                                        >  5:308602/1‑149 (MQ=255)                                                                          gTTTCTTCTTCGAGATCA‑TCCAGCGCAAGGCGGGGTACGCTGGTTACGGCGCTGCCAACGTTGCGGTGCGCCTGGCAGCCATGGCCAAGGCCCGTAGCGGGGCGGCGCGCAAGCCGGTGCTGTAGTCGCCTGCACCGGCCTGTCTtgtg                                                                  <  3:143030/149‑1 (MQ=255)                                                                           tttCTTCTTCGAGATCA‑TCCAGCGCAAGGCGGGGTACGCTGGTTACGGCGCTGCCAACGTTGCGGTGCGCCTGGCAGCCATGGCCAAGGCCCGTAGCGGGGCGGCGCGCAAGCCGGTGCTGTAGTCGCCTGCACCGGCCTGTCTTGTgg                                                                 >  7:35929/1‑149 (MQ=255)                                                                              cttcttcGAGATCA‑TCCAGCGCAAGGCGGGGTACGCTGGTTACGGCGCTGCCAACGTTGCGGTGCGCCTGGCAGCCATGGCCAAGGCCCGTAGCGGGGCGGCGCGCAAGCCGGTGCTGTAGTCGCCTGCACCGGCCTGTCTTGTGGGAg                                                              >  1:46315/1‑149 (MQ=255)                                                                               ttcttcGAGATCA‑TCCAGCGCAAGGCGGGGTACGCTGGTTACGGCGCTGCCAACGTTGCGGTGCGCCTGGCAGCCATGGCCAAGGCCCGTAGCGGGGCGGCGCGCAAGCCGGTGCTGTAGTCGCCTGCACCGGCCTGTCTTGTGGGAGt                                                             >  5:229704/1‑149 (MQ=255)                                                                                tcttcGAGATCA‑TCCAGCGCAAGGCGGGGTACGCTGGTTACGGCGCTGCCAACGTTGCGGTGCGCCTGGCAGCCATGGCCAAGGCCCGTAGCGGGGCGGCGCGCAAGCCGGTGCTGTAGTCGCCTGCACCGGCCTGTCTTGTGGGAGTg                                                            >  2:278205/1‑149 (MQ=255)                                                                                tcttcGAGATCA‑TCCAGCGCAAGGCGGGGTACGCTGGTTACGGCGCTGCCAACGTTGCGGTGCGCCTGGCAGCCATGGCCAAGGCCCGTAGCGGGGCGGCGCGCAAGCCGGTGCTGTAGTCGCCTGCACCGGCCTGTCTTGTGGGAGTg                                                            >  2:274676/1‑149 (MQ=255)                                                                                  ttcGAGATCA‑TCCAGCGCAAGGCGGGGTACGCTGGTTACGGCGCTGCCAACGTTGCGGTGCGCCTGGCAGCCATGGCCAAGGCCCGTAGCGGGGCGGCGCGCAAGCCGGTGCTGTAGTCGCCTGCACCGGCCTGTCTTGTGGGAGTggg                                                          >  8:271517/1‑149 (MQ=255)                                                                                     gagaTCA‑TCCAGCGCAAGGCGGGGTACGCTGGTTACGGCGCTGCCAACGTTGCGGTGCGCCTGGCAGCCATGGCCAAGGCCCGTAGCGGGGCGGCGCGCAAGCCGGTGCTGTAGTCGCCTGCACCGGCCTGTCTTGTGGGAGTGGGGt                                                        >  7:240141/1‑148 (MQ=255)                                                                                           a‑tcCAGCGCAAGGCGGGGTACGCTGGTTACGGCGCTGCCAACGTTGCGGTGCGCCTGGCAGCCATGGCCAAGGCCCGTAGCGGGGCGGCGCGCAAGCCGGTGCTGTAGTCGCCTGCACCGGCCTGTCTtgtg                                                                  >  4:25814/1‑132 (MQ=255)                                                                                           a‑tcCAGCGCAAGGCGGGGTACGCTGGTTACGGCGCTGCCAACGTTGCGGTGCGCCTGGCAGCCATGGCCAAGGCCCGTAGCGGGGCGGCGCGCAAGCCGGTGCTGTAGTCGCCTGCACCGGCCTGTCTtgtg                                                                  <  3:25814/132‑1 (MQ=255)                                                                                           a‑tcCAGCGCAAGGCGGGGTACGCTGGTTACGGCGCTGCCAACGTTGCGGTGCGCCTGGCAGCCATGGCCAAGGCCCGTAGCGGGGCGGCGCGCAAGCCGGTGCTGTAGTCGCCTGCACCGGCCTGTCTTGTGGGAGTGGGGTGAACCCt                                                 <  6:229704/149‑1 (MQ=255)                                                                                             tcCAGCGCAAGGCGGGGTACGCTGGTTACGGCGCTGCCAACGTTGCGGTGCGCCTGGCAGCCATGGCCAAGGCCCGTAGCGGGGCGGCGCGCAAGCCGGTGCTGTAGTCGCCTGCACCGGCCTGTCTTGTGGGAGTGGGGTGAACCCTg                                                >  8:92997/1‑149 (MQ=255)                                                                                               cAGCGCAAGGCGGGGTACGCTGGTTACGGCGCTGCCAACGTTGCGGTGCGCCTGGCAGCCATGGCCAAGGCCCGTAGCGGGGCGGCGCGCAAGCCGGTGCTGTAGTCGCCTGCACCGGCCTGTCTTGTGGGAGTGGGGTGAACCCTGc                                               <  7:271517/148‑1 (MQ=255)                                                                                                 gcgcAAGGCGGGGTACGCTGGTTACGGCGCTGCCAACGTTGCGGTGCGCCTGGCAGCCATGGCCAAGGCCCGTAGCGGGGCGGCGCGCAAGCCGGTGCTGTAGTCGCCTGCACCGGCCTGTCTTGTGGGAGTGGGGTGAACCCTGCTTc                                            <  6:164333/149‑1 (MQ=255)                                                                                                     aaGGCGGGGTACGCTGGTTACGGCGCTGCCAACGTTGCGGTGCGCCTGGCAGCCATGGCCAAGGCCCGTAGCGGGGCGGCGCGCAAGCCGGTGCTGTAGTCGCCTGCACCGGCCTGTCTTGTGGGAGTGGGGTGAACCCTGCTTCcaca                                        <  7:266767/149‑1 (MQ=255)                                                                                                       ggCGGGGTACGCTGGTTACGGCGCTGCCAACGTTGCGGTGCGCCTGGCAGCCATGGCCAAGGCCCGTAGCGGGGCGGCGCGCAAGCCGGTGCTGTAGTCGCCTGCACCGGCCTGTCTTGTGGGAGTGGGGTGAACCCTGCTTCCACAg                                       >  4:152456/1‑148 (MQ=255)                                                                                                        gCGGGGTACGCTGGTTACGGCGCTGCCAACGTTGCGGTGCGCCTGGCAGCCATGGCCAAGGCCCGTAGCGGGGCGGCGCGCAAGCCGGTGCTGTAGTCGCCTGCACCGGCCTGTCTTGTGGGAGTGGGGTGAACCCTGCTTCCACAGGa                                     <  8:42868/149‑1 (MQ=255)                                                                                                         cGGGGTACGCTGGTTACGGCGCTGCCAACGTTGCGGTGCGCCTGGCAGCCATGGCCAAGGCCCGTAGCGGGGCGGCGCGCAAGCCGGTGCTGTAGTCGCCTGCACCGGCCTGTCTTGTGGAAGCAGGGTTCACCCCACTCCCACAAGac                                    <  4:87002/149‑2 (MQ=255)                                                                                                          ggggTACGCTGGTTACGGCGCTGCCAACGTTGCGGTGCGCCTGGCAGCCATGGCCAAGGCCCGTAGCGGGGCGGCGCGCAAGCCGGTGCTGTAGTCGCCTGCACCGGCCTGTCTTGTGGGAGTGGGGTGAACCCTGCTTCCACAGGatt                                   <  8:35929/149‑1 (MQ=255)                                                                                                              tACGCTGGTTACGGCGCTGCCAACGTTGCGGTGCGCCTGGCAGCCATGGCCAAGGCCCGTAGCGGGGCGGCGCGCAAGCCGGTGCTGTAGTCGCCTGCACCGGCCTGTCTTGTGGGAGTGGGGTGAACCCTGCTTCCACAGGAttatta                               <  2:67446/149‑1 (MQ=255)                                                                                                               acccTGCTTACGGCGCTGCCAACTTTGCGGCGCGCCTGGCAGCCATGGCCAAGGCCCGTAGCGTGGCTGCGCGCAAGCCGGAGCTGTAGTCGCATGCACCGGCCTGTCTTGTGGTAGTTGGGTGAACCCTGCTTCCACAGGatta                                  <  6:91973/142‑1 (MQ=255)                                                                                                               aCGCTGGTTACGGCGCTGCCAACGTTGCGGCGGGCCTGGCAGCCATGGCCAAGGCCCGTAGCGGTGCGGCGCGCAAGCCGGTGCTGTAGTCGCCTGCACCGGCCTGTCTTGTGGGAGTGGGGTGAACCCTGCTTCCACAGGatta                                  <  6:96653/145‑1 (MQ=255)                                                                                                               aCGCTGGTTACGGCGCTGCCAACGTTGCGGCGCGCCTGGCAGCCATGGCCAAGGCGCGTAGCGGGGCGGCGGGCAAGCCGGTGCTGTAGTCGCCTGCACCGGCGTGTCTTGTGGGAGTGGGGTGAACCCTGCTTCGTCTGGattattgt                              >  5:91973/1‑147 (MQ=255)                                                                                                               aCGCTGGTTACGGCGCTGCCAACGTTGCGGCGCGCCTGGCAGCCATGGCCAAGGCCCGTAGCGGGGCGGCGCGCAAGCCGGTGCTGTAGTCGCCTGCACCGGCCTGTCTTGTGGGAGTGGGGTGAACCCTGCTTCCACAGGatta                                  >  5:96653/1‑145 (MQ=255)                                                                                                                  cTGGTTACGGCGCTGCCAACGTTGCGGTGCGCCTGGCAGCCATGGCCAAGGCCCGTAGCGGGGCGGCGCGCAAGCCGGTGCTGTAGTCGCCTGCACCGGCCTGTCTTGTGGGAGTGGGGTGAACCCTGCTTCCACAGGATTATTACGGc                           >  2:20897/1‑149 (MQ=255)                                                                                                                   tGGTTACGGCGCTGCCAACGTTGCGGTGCGCCTGGCAGCCATGGCCAAGGCCCGTAGCGGGGCGGCGCGCAAGCCGGTGCTGTAGTCGCCTGCACCGGCCTGTCTTGTgg                                                                 >  7:56503/1‑110 (MQ=255)                                                                                                                   tGGTTACGGCGCTGCCAACGTTGCGGTGCGCCTGGCAGCCATGGCCAAGGCCCGTAGCGGGGCGGCGCGCAAGCCGGTGCTGTAGTCGCCTGCACCGGCCTGTCTTGTgg                                                                 <  8:56503/110‑1 (MQ=255)                                                                                                                   tGGTTACGGCGCTGCCAACGTTGCGGTGCGCCTGGCAGCCATGGCCAAGGCCCGTAGCGGGGCGGCGCGCAAGCCGGTGCTGTAGTCGCCTGCACCGGCCTGTCTTGTGGGAGTggg                                                          <  6:195481/117‑1 (MQ=255)                                                                                                                   tGGTTACGGCGCTGCCAACGTTGCGGTGCGCCTGGCAGCCATGGCCAAGGCCCGTAGCGGGGCGGCGCGCAAGCCGGTGCTGTAGTCGCCTGCACCGGCCTGTCTTGTGGGAGTggg                                                          >  5:195481/1‑117 (MQ=255)                                                                                                                     gTTACGGCGCTGCCAACGTTGCGGTGCGCCTGGCAGCCATGGCCAAGGCCCGTAGCGGGGCGGCGCGCAAGCCGGTGCTGTAGTCGCCTGCACCGGCCTGTCTTGTGGGAGTGGGGTGAACCCTGCTTCCACAGGATTATTACGGcc                          <  1:274676/147‑1 (MQ=255)                                                                                                                     gTTACGGCGCTGCCAACGTTGCGGTGCGCCTGGCAGCCATGGCCAAGGCCCGTAGCGGGGCGGCGCGCAAGCCGGTGCTGTAGTCGCCTGCACCGGCCTGTCTTGTGGGAGTGGGGTGAACCCTGCTTCCACAGGATTATTACGGcc                          <  1:278205/147‑1 (MQ=255)                                                                                                                         cGGCGCTGCCAACGTTGCGGTGCGCCTGGCAGCCATGGCCAAGGCCCGTAGCGGGGCGGCGCGCAAGCCGGTGCTGTAGTCGCCTGCACCGGCCTGTCTTGTGGGAGTGGGGTGAACCCTGCTTCCACAGGATTATTACGGCCCGAtt                     <  3:58009/148‑1 (MQ=255)                                                                                                                          ggCGCTGCCAACGTTGCGGTGCGCCTGGCAGCCATGGCCAAGGCCCGTAGCGGGGCGGCGCGCAAGCCGGTGCTGTAGTCGCCTGCACCGGCCTGTCTTGTGGGAGTGGGGTGAACCCTGCTTCCACAGGATTATTACGGCCCGATTCa                   <  3:214577/149‑1 (MQ=255)                                                                                                                                           ggTGCGCCTGGCAGCCATGGCCAAGGCCCGTAGCGGGGCGGCGCGCAAGCCGGTGCTGTAGTCGCCTGCACCGGCCTGTCTTGTGGGAGTGGGGTGAACCCTGCTTCCACAGGATTATTACGGCCCGATTCAGTGACGCTCAGccacca  >  8:54957/1‑149 (MQ=255)                                                                                                                                             tGCGCCTGGCAGCCATGGCCAAGGCCCGTAGCGGGGCGGCGCGCAAGCCGGTGCTGTAGTCGCCTGCACCGGCCTGTCTTGTGGGAGTGGGGTGAACCCTGCTTCCACAGGATTATTACGGCCCGATTCAGTGACGCTCa         >  8:267713/1‑140 (MQ=255)                                                                                                                                                 |                                                                                                                                               TACAACGTGCTGTATGACCGCGACGCTCAAGGTGGCGAGCTGTTCCACGTCTATACCGAGCCGTTCGAGGAGCGTTTCTTCTTCGAGATCA‑TCCAGCGCAAGGCGGGGTACGCTGGTTACGGCGCTGCCAACGTTGCGGTGCGCCTGGCAGCCATGGCCAAGGCCCGTAGCGGGGCGGCGCGCAAGCCGGTGCTGTAGTCGCCTGCACCGGCCTGTCTTGTGGGAGTGGGGTGAACCCTGCTTCCACAGGATTATTACGGCCCGATTCAGTGACGCTCAGCCACCA  >  NC_002947/2902629‑2902914

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑