| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 237,452 | T→G | 5.5% | D111E (GAT→GAG) | algR → | alginate biosynthesis regulatory protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 237,452 | 0 | T | G | 5.5% | 212.7 / 2.2 | 67 | D111E (GAT→GAG) | algR | alginate biosynthesis regulatory protein |
| Reads supporting (aligned to +/- strand): ref base T (31/32); new base G (2/2); total (33/34) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.66e-01 | |||||||||||
CCTGCAGGTTGCCGCTCGCCTGTGCGAACGCGAGGCGCCGCC‑CGCGGTGGTGTTTTGCTCCGGGGATGATGAATACGGTGCAGAGGCATTCAAGGACAGTACCCTCAGCCATGT‑GACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCGGCCGGCCAATGAAGGCGGCGGCCCACGCAGCCATATCAGCGCCCGCACGCGCAAAGGCATCGAACTGATCCCGTTACCCCAGGTGATCTATTTC > NC_002947/237305‑237599 | ccTGCAGGTTGCCGCTCGCCTGTGCGAACGCGAGGCGCCGCC‑CGCGGTGGTGTTTTGCTCCGGGGATGATGAATACGGTGCAGAGGCATTCAAGGACAGTACCCTCAGCCATGT‑GACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATg > 4:229660/1‑149 (MQ=255) cTGCAGGTAGCCGCTCGCCTGTGCGAACGCGAGGCGCCGCC‑CGCGGTGGTGTTGTGCTCCGGGGATGATGAATACGGAGAAGAGGCCTACAAGGACAGTACACTCAGCCAAGT‑GAACAAGCCCTACCAGGCCCACGCCTTGCGCGATga > 3:224107/1‑148 (MQ=255) cAGGTTGCCGCTCGCCTGTGCGAACGCGAGGCGCCGCC‑CGCGGTGGTGTTTTGCTCCGGGGATGATGAATACGGTGCAGAGGCATTCAAGGACAGTACCCTCAGCCATGT‑GACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCtt > 6:254514/1‑149 (MQ=255) ggTTGCCGCTCGCCTGTGCGAACGCGAGGCGCCGCC‑CGCGGTGGTGTTTTGCTCCGGGGATGATGAATACGGTGCAGAGGCATTCAAGGACAGTACCCTCAGCCATGT‑GACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTgc < 8:51344/149‑1 (MQ=255) gTTGCCGCTCGCCTGTGCGAACGCGAGGCGCCGCC‑CGCGGTGGTGTTTTGCTCCGGGGATGATGAATACGGTGCAGAGGCATTCAAGGACAGTACCCTCAGCCATGT‑GACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTgcg < 2:34495/149‑1 (MQ=255) gTTGCCGCTCGCCTGTGCGAACGCGAGGCGCCGCC‑CGCGGTGGTGTTTTGCTCCGGGGATGATGAATACGGTGCAGAGGCATTCAAGGACAGTACCCTCAGCCATGT‑GACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTgcg > 6:106027/1‑149 (MQ=255) cGCTCGCCTGTGCGAACGCGAGGCGCCGCC‑CGCGGTGGTGTTTTGCTCCGGGGATGATGAATACGGTGCAGAGGCATTCAAGGACAGTACCCTCAGCCATGT‑GACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGTCTTGCGCAAgg > 4:209001/1‑149 (MQ=255) cGCTCGCCTGTGCGAACGCGAGGCGCCGCC‑CGCGGTGGTGTTTTGCTCCGGGGATGATGAATACGGTGCAGAGGCATTCAAGGACAGTACCCTCAGCCATGT‑GACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGTCTTGCGCAAgg > 6:187237/1‑149 (MQ=255) cTGTGCGAACGCGAGGCGCCGCC‑CGCGGTGGTGTTTTGCTCCGGGGATGATGAATACGGTGCAGAGGCATTCAAGGACAGTACCCTCAGCCATGT‑GACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGaaa > 3:286847/1‑148 (MQ=255) cTGTGCGAACGCGAGGCGCCGCC‑CGCGGTGGTGTTTTGCTCCGGGGATGATGAATACGGTGCAGAGGCATTCAAGGACAGTACCCTCAGCCATGT‑GACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGaaa > 2:24217/1‑148 (MQ=255) cGAACGCGAGGCGCCGCC‑CGCGGTGGTGTTTTGCTCCGGGGATGATGAATACGGTGCAGAGGCATTCAAGGACAGTACCCTCAGCCATGT‑GACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAAccc > 7:281686/1‑148 (MQ=255) cGAACGCGAGGCGCCGCC‑CGCGGTGGTGGTTTGCTCCGGGGATGATGAATACGGTGCAGAGGCATTCAAGGACAGTACCCTCAGCCATGT‑GACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAAccc > 1:189242/1‑148 (MQ=255) gAACGCGAGGCGCCGCC‑CGCGGTGGTGTTTTGCTCCGGGGATGATGAATACGGTGCAGAGGCATTCAAGGACAGTACCCTCAGCCATGT‑GACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCaa < 4:6431/149‑1 (MQ=255) caccgcgggcggcGCCTCGCGGTGGTGTTTTGCTCCGGGGATGATGAATACGGTGCAGAGGCATTCGAGGACAGTACCCTCAGCCATGT‑GACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCaa > 3:187222/8‑149 (MQ=255) caccgcgggcggcGCCTCGCGGTGGTGTTTTGCTCCGGGGATGATGAATACGGTGCAGAGGCATTCAAGGACAGTACCCTCAGCCATGT‑GACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCaa > 3:91002/8‑149 (MQ=255) aaCGCGAGGCGCCGCC‑CGCGGTGGTGTTTTGCTCCGGGGATGATGAATACGGTGCAGAGGCATTCAAGGACAGTACCCTCAGCCATGT‑GACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAAc < 1:217787/149‑1 (MQ=255) aCGCGAGGCGCCGCC‑CGCGGTGGTGTTTTGCTCCGGGGATGATGAATACGGTGCAGAGGCATTCAAGGACAGTACCCTCAGCCATGT‑GACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAacccaccc > 8:263598/1‑149 (MQ=255) aCGCGAGGCGCCGCC‑CGCGGTGGTGTTTTGCTCCGGGGATGATGAATACGGTGCAGAGGCATTCAAGGACAGTACCCTCAGCCATGT‑GACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAAcc > 3:55595/1‑149 (MQ=255) gcgAGGCGCCGCC‑CGCGGTGGTGTTTTGCTCCGGGGATGATGAATACGGTGCAGAGGCATTCAAGGACAGTACCCTCAGCCATGT‑GACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACcgc > 2:324757/1‑149 (MQ=255) gAGGCGCCGCC‑CGCGGTGGTGTTTTGCTCCGGGGATGATGAATACGGTGCAGAGGCATTCAAGGACAGTACCCTCAGCCATGT‑GACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCgcgc > 2:269689/1‑149 (MQ=255) ggCGCCGCC‑CGCGGTGGTGTTTTGCTCCGGGGATGATGAATACGGTGCAGAGGCATTCAAGGACAGTACCCTCAGCCATGT‑GACCAAGCCCTTCCAGGCCCACGCGTTGCGCGATGCCTTGCGCTCGGCCGAAAAACCCAACAGCGcc > 4:240778/1‑148 (MQ=255) cgcc‑cgcGGTGGTGTTTTGCTCCGGGGATGATGAATACGGTGCAGAGGCATTCAAGGACAGTACCCTCAGCCATGT‑GACCAAGCCCTTCCAGGCCCACGCCTTGCGCGAt > 6:147935/1‑110 (MQ=255) cgcc‑cgcGGTGGTGTTTTGCTCCGGGGATGATGAATACGGTGCAGAGGCATTCAAGGACAGTACCCTCAGCCATGT‑GACCAAGCCCTTCCAGGCCCACGCCTTGCGCGAt < 5:147935/110‑1 (MQ=255) gcc‑cgcGGTGGTGTTTTGCTCCGGGGATGATGAATACGGTGCAGAGGCATTCAAGGACAGTACCCTCAGCCATGT‑GACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTgg > 7:19301/1‑149 (MQ=255) cc‑cgcGGTGGTGTTTTGCTCCGGGGATGATGAATACGGTGCAGAGGCATTCAAGGACAGTACCCTCAGCCATGT‑GACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCACCCAATTggc < 5:254514/149‑1 (MQ=255) c‑cgcGGTGGTGTTTTGCTCCGGGGATGATGAATACGGTGCAGAGGCATTCAAGGACAGTACCCTCAGCCATGT‑GACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTggcg < 3:174381/149‑1 (MQ=255) ggtggtGTTTTGCTCCGGGGATGATGAATACGGTGCAGAGGCATTCAAGGACAGTACCCTCAGCCATGT‑GACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGgcgc < 2:251216/149‑1 (MQ=255) tggtgTTTTGCTCCGGGGATGATGAATACGGTGCAGAGGCATTCAAGGACAGTACCCTCAGCCATGT‑GACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCt > 3:198269/1‑148 (MQ=255) gtgtTTTGCTCCGGGGATGATGAATACGGTGCAGAGGCATTCAAGGACAGTACCCTCAGCCATGT‑GACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTa < 5:171791/148‑1 (MQ=255) tgtTTTGCTCCGGGGATGATGAATACGGTGCAGAGGCATTCAAGGACAGTACCCTCAGCCATGT‑GACCAAGCCCTTCCAGGCCCACGCCATGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTAc < 2:196594/148‑1 (MQ=255) ttttGCTCCGGGGATGATGAATACGGTGCAGAGGCATTCAAGGACAGTACCCTCAGCCATGT‑GACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTAccc < 2:313542/148‑1 (MQ=255) ttttGCTCCGGGGATGATGAATACGGTGCAGAGGCATTCAAGGACAGTACCCTCAGCCATGT‑GACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACccg > 5:200175/1‑149 (MQ=255) ccGGGGATGATGAATACGGTGCAGAGGCATTCAAGGACAGTACCCTCAGCCATGT‑GACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCgcgc > 6:5552/1‑121 (MQ=255) ccGGGGATGATGAATACGGTGCAGAGGCATTCAAGGACAGTACCCTCAGCCATGT‑GACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCgcgc < 5:5552/121‑1 (MQ=255) cGGGGATGATGAATACGGTGCAGAGGCATTCAAGGACAGTACCCTCAGCCATGT‑GACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCcggccggc < 3:240778/147‑1 (MQ=255) cGGGGATGATGAATACGGTGCAGAGGCATTCAAGGACAGTACCCTCAGCCATGT‑GACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCggccggcc < 5:253727/148‑1 (MQ=255) ggggATGATGAATACGGTGCAGAGGCATTCAAGGACAGTACCCTCAGCCATGT‑GACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCGGCCGGCCaa < 6:200175/149‑1 (MQ=255) gggATGATGAATACGGTGCAGAGGCATTCAAGGACAGTACCCTCAGCCATGT‑GACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCGGCCGGCCAAt < 1:324757/149‑1 (MQ=255) gatgatGAATACGGTGCAGAGGCATTCAAGGACAGTACCCTCAGCCATGT‑GACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCGGCCGGCCAATGa < 8:57470/149‑1 (MQ=255) gatgatGAATACGGTGCAGAGGCATTCAAGGACAGTACCCTCAGCCATGT‑GACCAAGCCCTTCCAGGCCCACGCCTTGCGCAAGGCATCGCGCAAGGcgtgg > 4:235884/1‑98 (MQ=38) gatgatGAATACGGTGCAGAGGCATTCAAGGACAGTACCCTCAGCCATGT‑GACCAAGCCCTTCCAGGCCCACGCCTTGCGCAAGGCATCGCGCAAGGcgtgg < 3:235884/102‑5 (MQ=38) atgatgAATACGGTGCAGAGGCATTCAAGGACAGTACCCTCAGCCATGT‑GACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCGGCCGGCCAATGaa < 7:61635/149‑1 (MQ=255) gatgaATACGGTGCAGAGGCATTCAAGGACAGTACCCTCAGCCATGT‑GACCAAGCCCTTCCAGGCCCACGCCTTGCGCAAGGCATCGCGCaa < 1:37053/92‑1 (MQ=255) gatgaATACGGTGCAGAGGCATTCAAGGACAGTACCCTCAGCCATGT‑GACCAAGCCCTTCCAGGCCCACGCCTTGCGCAAGGCATCGCGCaa > 2:37053/1‑92 (MQ=255) aCGGTGCAGAGGCATTCAAGGACAGTACCCTCAGCCATGT‑GACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCGGCCGGCCAATGAAggcggcggc > 3:79506/1‑149 (MQ=255) agGCATTCAAGGACAGTACCCTCAGCCATGT‑GACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCGGCCGGCCAATGAAGGCGGCGGCCCACGCAGc > 3:41207/1‑149 (MQ=255) agGCATTCAAGGACAGTACCCTCAGCCATGT‑GACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCGGCCGGCCAATGAAGGCGGCGGCCCACGCAGc > 3:45453/1‑149 (MQ=255) tCAAGGACAGTACCCTCAGCCATGTGGACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCGGCCGGCCAATGAAGGCGGCGGCCCACGCAGCCatat > 1:169575/1‑149 (MQ=255) aaGGACAGTACCCTCAGCCATGT‑GACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCGGCCGGCCAATGAAGGCGGCGGCCCACGCAGCCATATCa < 3:229660/148‑1 (MQ=255) aGGACAGTACCCTCAGCCATGT‑GACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCGGCCGGCCAATGAAGGCGGCGGCCCACGCAGCCATATCAgc < 4:79506/149‑1 (MQ=255) aGGACAGTACCCTCAGCCATGT‑GACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCGGCCGGCCAATGAAGGCGGCGGCCCACGCAGCCATATCAgc < 5:61983/149‑1 (MQ=255) ggACAGTACCCTCAGCCATGT‑GACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCGGCCGGCCAATGAAGGCGGCGGCCCACGCAGCCATATCAgcg > 1:177335/1‑149 (MQ=255) aGTACCCTCAGCCATGT‑GACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCGGCCGGCCAATGAAGGCGGCGGCCCACGCAGCCATATCAGCGCCCg < 4:55595/149‑1 (MQ=255) ccTCAGCCATGT‑GACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCGGCCGGCCAATGAAGGCGGCGGCCCACGCAGCCATATCAGCGCCCGCAcgc > 3:86473/1‑149 (MQ=255) ccTCAGCCATGT‑GACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCGGCCGGCCAATGAAGGCGGCGGCCCACGCAGCCATATCAGCGCCCGCAcgc > 2:234359/1‑149 (MQ=255) gCCATGT‑GACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCGGCCGGCCAATGAAGGCGGCGGCCCACGCAGCCATATCAGCGCCCGCACGCGCaaa < 1:24217/149‑1 (MQ=255) ccATGT‑GACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCGGCCGGCCAATGAAGGCGGCGGCCCACGCAGCCATATCAGCGCCCGCACGCGCAAAg < 4:198269/149‑1 (MQ=255) ccATGT‑GACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCGGCCGGCCAATGAAGGCGGCGGCCCACGCAGCCATATCAGCGCCCGCACGCGCAAAg < 2:189242/149‑1 (MQ=255) aTGT‑GACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCGGCCGGCCAATGAAGGCGGCGGCCCACGCAGCCatat > 6:235464/1‑127 (MQ=255) aTGT‑GACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCGGCCGGCCAATGAAGGCGGCGGCCCACGCAGCCatat < 5:235464/127‑1 (MQ=255) aTGT‑GACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCGGCCGGCCAATGAAGGCGGCGGCCCACGCAGCCATATCAGCGCCCGCACGCGCAAAgg > 6:324177/1‑148 (MQ=255) aTGT‑GACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCGGCCGGCCAATGAAGGCGGCGGCCCACGCAGCCATATCAGCGCCCGCACGCGCAAAGGc < 2:169575/149‑1 (MQ=255) aTGT‑GACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGAGCTTACCCGGCCGGCCAATGAAGGCGGCGGCCCACGCAGCCATATCAGCGCCCGCACGCGCAAAGGc < 3:9530/149‑1 (MQ=255) t‑gACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCGGCCGGCCAATGAAGGCGGCGGCCCACGCAGCCATATCAGCGCCCGCACGCGCAAAGGCAt < 3:228126/148‑1 (MQ=255) t‑gACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCGGCCGGCCAATGAAGGCGGCGGCCCACGCAGCCATATCAGCGCCCGCACGCGCAAAGGCAt < 8:281686/148‑1 (MQ=255) cAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCGGCCGGCCAATGAAGGCGGCGGCCCACGCAGCCATATCAGCGCCCGCACGCGCAAAGGCATCGAAc > 4:109141/1‑149 (MQ=255) aGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCGGCCGGCCAATGAAGGCGGCGG‑CCACGCAGCCATATCAGCGCCCGCACGCGCAAAGGCATCGAACTGATCCCGTTAc < 4:187222/149‑1 (MQ=255) gcgATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCGGCCGGCCAATGAAGGCGGCGGCCCACGCAGCCATATCAGCGCCCGCACGCGCAAAGGCATCGAACTGATCCCGTTACCCCAGGTGATCTAt < 8:19301/149‑1 (MQ=255) aTGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCGGCCGGCCAATGAAGGCGGCGGCCCACGCAGCCATATCAGCGCCCGCATGCGCAAAGGCATCGAACTGATCCCGTTACCCCAGGTGATCTATTTc < 1:234359/149‑1 (MQ=255) | CCTGCAGGTTGCCGCTCGCCTGTGCGAACGCGAGGCGCCGCC‑CGCGGTGGTGTTTTGCTCCGGGGATGATGAATACGGTGCAGAGGCATTCAAGGACAGTACCCTCAGCCATGT‑GACCAAGCCCTTCCAGGCCCACGCCTTGCGCGATGCCTTGCGCAAGGCCGAAAAACCCAACCGCGCCCAATTGGCGGCGCTTACCCGGCCGGCCAATGAAGGCGGCGGCCCACGCAGCCATATCAGCGCCCGCACGCGCAAAGGCATCGAACTGATCCCGTTACCCCAGGTGATCTATTTC > NC_002947/237305‑237599 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |