| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,136,489 | T→A | 5.8% | F233Y (TTC→TAC) | PP_3640 → | AraC family transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,136,489 | 0 | T | A | 5.8% | 214.9 / 2.2 | 69 | F233Y (TTC→TAC) | PP_3640 | AraC family transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base T (28/37); new base A (2/2); total (30/39) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.25e-01 | |||||||||||
GCAGGGCAATCGCTGGGCGGGCTGGTCGCCCTCGCCCGCCAGCCGGCATTTGCCGGATTGCTTGAGCAATTGATCGAGCATCCGGGGCAAACCTGGACCATGGAGAACATGGCCGCTTGCACCGGGTTGTCACGGTCGGCTTTTTTCAAGCGTTTCAGCGAGCTGGCCGGGCAGTCACCGGGACAAGTGCTGCTGGCGCTGCGCATGCGCCATGCCAGCCAGTTGCTGCAGGCGGGGCATACCGTTGAGCAGGTAGGCGCGCAGGTGGGGTATCAGTCGGTGGCCGCATTCA > NC_002947/4136344‑4136635 | gCAGGGCAATCGCTGGGCGGGCTGGTCGCCCTCGCCCGCCAGCCGGCATTTGCCGGATTGCTTGAGCAATTGATCGAGCATCCGGGGCAAACCTGGACCATGGAGAACATGGCCGCTTGCACCGGGTTGTCACGGTCGGCTTTTTTCaa < 2:154548/149‑1 (MQ=255)gCAGGGCAATCGCGGGGCGGGCTGGTCGCCCTCGCGCGCCAGCCGGCATTTGCCGGATTGCTTGAGCAATTGATCGAGCATCCGGGGCAAACCTGGACCATGGAGAACATGGCCGCTTGCACCGGGTTGTCACGGTCGGCTTTTTTCaa < 4:49897/149‑1 (MQ=255) gCAATCGCTGGGCGGGCTGGTCGCCCTCGCCCGCCAGCCGGCATTTGCCGGATTGCTTGAGCAATTGATCGAGCATCCGGGGCAAACCTGGACCATGGAGAACATGGCCGCTTGCACCGGGTTGTCACGGTCGGCTTTTTTCAAGCGtt < 3:311573/149‑1 (MQ=255) aaTCGCTGGGCGGGCTGGTCGCCCTCGCCCGCCAGCCGGCATTTGCCGGATTGCTTGAGCAATTGATCGAGCATCCGGGGCAAACCTGGACCATGGAGAACATGGCCGCTTGCACCGGGTTGTCACGGTCGGCTTTTTTCAAGCGttt > 7:7051/1‑148 (MQ=255) tCGCTGGGCGGGCTGGTCGCCCTCGCCCGCCAGCCGGCATTTGCCGGATTGCTTGAGCAATTGATCGAGCATCCGGGGCAAACCTGGACCATGGAGAACATGGCCGCTTGCACCGGGTTGTCACGGTCGGCTTTTTTCaa < 5:139581/140‑1 (MQ=255) tCGCTGGGCGGGCTGGTCGCCCTCGCCCGCCAGCCGGCATTTGCCGGATTGCTTGAGCAATTGATCGAGCATCCGGGGCAAACCTGGACCATGGAGAACATGGCCGCTTGCACCGGGTTGTCACGGTCGGCTTTTTTCaa > 6:139581/1‑140 (MQ=255) gcgggcTGGTCGCCCTCGCCCGCCAGCCGGGATTTGCCGGATTGCTTGAGCAATTGATCGAGCATCCGGGGCAAACCTGGACCATGGAGAACATGGCCGCTTGCACCGGGTTGTCACGGTCGGCTTTTTTCAAGCGTTTCAGCGAGCTg < 1:234466/149‑1 (MQ=255) ggcTGGTCGCCCTCGCCCGCCAGCCGGCATTTGCCGGATTGCTTGAGCAATTGATCGAGCATCCGGGGCAAACCTGGACCATGGAGAACATGGCCGCTTGCACCGGGTTGTCACGGTCGGCTTTTTTCAAGCGTTTCAGCGAGCTGGcc < 8:7051/149‑1 (MQ=255) cTGGTCGCCCTCGCCCGCCAGCCGGCATTTGCCGGATTGCTTGAGCAATTGATCGAGCATCCGGGGCAAACCTGGACCATGGAGAACATGGCCGCTTGCACCGGGTTGTCACGGTCGGCTTTTTTCAAGCGTTTCAGCGAGCTGGCCgg < 7:38880/149‑1 (MQ=255) tGGTCGCCCTCGCCCGCCAGCCGGCATTTGCCGGATTGCTTGAGCAATTGATCGAGCATCCGGGGCAAACCTGGACCATGGAGAACATGGCCGCTTGCACCGGGTTGTCACGGTCGGCTTTTTTCAAGCGTTTCAGCGAGCTGGCCggg > 3:87775/1‑149 (MQ=255) ggTCGCCCTCGCCCGCCAGCCGGCATTTGCCGGATTGCTTGAGCAATTGATCGAGCATCCGGGGCAAACCTGGACCATGGAGAACATGGCCGCTTGCACCGGGTTGTCACGGTCGGCTTTTTTCAAGCGTTTCAGCGAGCTGGCCGGGc < 2:149735/149‑1 (MQ=255) gTCGCCCTCGCCCGCCAGCCGGCATTTGCCGGATTGCTTGAGCAATTGATCGAGCATCCGGGGCAAACCTGGACCATGGAGAACATGGCCGCTTGCACCGGGTTGTCACGGTCGGCTTTTTTCAAGCGTTTCAGCGAGCTGGCCGGGc < 6:69837/148‑1 (MQ=255) gccctcgcccGCCAGCCGGCATTTGCCGGATTGCTTGAGCAATTGATCGAGCATCCGGGGCAAACCTGGACCATGGAGAACATGGCCGCTTGCACCGGGTTGTCACGGTCGGCTTTTTTCAAGCGTTTCAGCGAGCTGGCCGGGCAGt > 6:304994/1‑148 (MQ=255) cctcgcccGCCAGCCGGCATTTGCCGGATTGCTTGAGCAATTGATCGAGCATCCGGGGCAAACCTGGACCATGGAGAACATGGCCGCTTGCACCGGGTTGTCACGGTCGGCTTTTTTCAAGCGTTTCAGCGAGCTGGCCgg < 6:312900/141‑1 (MQ=255) cctcgcccGCCAGCCGGCATTTGCCGGATTGCTTGAGCAATTGATCGAGCATCCGGGGCAAACCTGGACCATGGAGAACATGGCCGCTTGCACCGGGTTGTCACGGTCGGCTTTTTTCAAGCGTTTCAGCGAGCTGGCCgg > 5:312900/1‑141 (MQ=255) cctcgcccGCCAGCCGGCATTTGCCGGATTGCTTGAGCAATTGATCGAGCATCCGGGGCAAACCTGGACCATGGAGAACATGGCCGCTTGCACCGGGTTGTCACGGTCGGCTTTTTTCAAGCGTTTCAGCGAGCTGGCCGGGCAGTCAc < 7:201710/149‑1 (MQ=255) cctcgcccGCCAGCCGGCATTTGCCGGATTGCTTGAGCAATTGATCGAGCATCCGGGGCAAACCTGGACCATGGAGAACATGGCCGCTTGCACCGGGTTGTCACGGTCGGCTTTTTTCAAGCGTTTCAGCGAGCTGGCCGGGCAGTCAc > 4:29045/1‑149 (MQ=255) cctcgcccGCCAGCCGGCATTTGCCGGATTGCTTGAGCAATTGATCGAGCATCCGGGGCAAACCTGGACCATGGAGAACATGGCCGCTTGCACCGGGTTGTCACGGTCGGCTTTTTTCAAGCGTTTCAGCGAGCTGGCCGGGCAGTCAc > 3:196852/1‑149 (MQ=255) cgcccgccAGCCGGCATTTGCCGGATTGCTTGAGCAATTGATCGAGCATCCGGGGCAAACCTGGACCATGGAGAACATGGCCGCTTGCACCGGGTTGTCACGGTCGGCTTTTTTCAAGCGTTTCAGCGAGCTGGCCGGGCAGTCACCgg > 8:8000/1‑149 (MQ=255) ggccgccAGCCGGCATTTGCCGGATTGCTTGAGCAATTGATCGTGCATCCGGGGCAAACCTGGACCATGGAGAACATGGCCGCTTGCACCGGGTTGTCACGGTCGGCTTTTTTCAAGCGTTTCAGCGAGCTGGCCGGGCAGCCACCgg < 8:138912/146‑1 (MQ=255) cAGCCGGCATTTGGCGGATTGCTTGAGCAATTGATCGAGCATCCGGGGCAAACCTGGACCATGGAGAACATGGCCGCTTGCACCGGGTTGTCACGGTCGGCTTTTTTCAAGCGTTTCAGCGAGCTGGCCGGGCAGTCACCGGGACAAGt < 3:32499/149‑1 (MQ=255) cAGCCGGCATTTGCCGGATTGCTTGAGCAATTGATCGAGCATCCGGGGCAAACCTGGACCATGGAGAACATGGCCGCTTGCACCGGGTTGTCACGGTCGGCTTTTTTCAAGCGTTTCAGCGAGCTGGCCGGGCAGTCACCGGGACAAGt < 2:120501/149‑1 (MQ=255) ccGGCATTTGCCGGATTGCTTGAGCAATTGATCGAGCATCCGGGGCAAACCTGGACTATGGAGAACATGGCCGCTTGCACCGGGTTGTCACGGTCGGCTTTTTTCaa < 8:304977/107‑1 (MQ=255) ccGGCATTTGCCGGATTGCTTGAGCAATTGATCGAGCATCCGGGGCAAACCTGGACAATGGAGAACATGGCCGCTTGCACCGGGTTGTCACGGTCGGCTTTTTTCaa > 7:304977/1‑107 (MQ=255) aTTTGCCGGATTGCTTGAGCAATTGATCGAGCATCCGGGGCAAACCTGGACCATGGAGAACATGGCCGCTTGCACCGGGTTGTCACGGTCGGCTTTTTTCAAGCGTTTCAGCGAGCTGGCCGGGCAGTCACCGGGACAAGTGCTGCTgg > 1:155803/1‑149 (MQ=255) cGGATTGCTTGAGCAATTGATCGAGCATCCGGGGCAAACCTGGACCATGGAGAACATGGCCGCTTGCACCGGGTTGTCACGGTCGGCTTTTTTCAAGCGTTTCAGCGAGCTGGCCGGGCAGTCACCGGGACAAGTGCTGCTGGCGCTgc < 8:291563/149‑1 (MQ=255) gATTGCTTGAGCAATTGATCGAGCATCCGGGGCAAACCTGGACCATGGAGAACATGGCCGCTTGCACCGGGTTGTCACGGTCGGCTTTTTTCAAGCGTTTCAGCGAGCTGGCCGGGCAGTCACCGGGACAAGTGCTGCTGGCGCTg > 5:142561/1‑146 (MQ=255) gATTGCTTGAGCAATTGATCGAGCATCCGGGGCAAACCTGGACCATGGAGAACATGGCCGCTTGCACCGGGTTGTCACGGTCGGCTTTTTTCAAGCGTTTCAGCGAGCTGGCCGGGCAGTCACCGGGACAAGTGCTGCTGGCGCTg < 6:142561/146‑1 (MQ=255) gCTTGAGCAATTGATCGAGCATCCGGGGCAAACCTGGACCATGGAGAACATGGCCGCTTGCACCGGGTTGTCACGGTCGGCTTTTTTCAAGCGTTTCAGCTTAAGTGCCAGGCAGTCACCGGGACAAGTGCTGCTGGCGCTGCGCATgc > 1:272798/1‑149 (MQ=255) aGCAATTGATCGAGCATCCGGGGCAAACCTGGACCATGGAGAACATGGCCGCTTGCACCGGGTTGTCACGGTCGGCTTTTTTCAAGCGTTTCAGCGAGCTGGCCGGGCAGTCACCGGGACAAGTGCTGCTGGCGCTGCGCATGCGCCAt > 2:1993/1‑149 (MQ=255) gCAATTGATCGAGCATCCGGGGCAAACCTGGACCATGGAGAACATGGCCGCTTGCACCGGGTTGTCACGGTCGGCTTTTTTCAAGCGTTTCAGCGAGCTGGCCGGGCAGTCACCGGGACAAGTGCTGCTGGCGCTGCGCATGCGCCATg > 7:217050/1‑149 (MQ=255) aaTTGATCGAGCATCCGGGGCAAACCTGGACCATGGAGAACATGGCCGCTTGCACCGGGTTGTCACGGTCGGCTTTTTTCAAGCGTTTCAGCGAGCTGGCCGGGCAGTCACCGGGACAAGTGCTCCTGGCGCTGCGCATGCGCCATgc > 4:285589/1‑148 (MQ=255) aTTGATCGAGCATCCGGGGCAAACCTGGACCATGGAGAACATGGCCGCTTGCACCGGGTTGTCACGGTCGGCTTTTTTCAAGCGTTTCAGCGAGCTGGCCGGGCAGTCACCGGGACAAGTGCTGCTGGCGCTgcgc > 6:36841/1‑136 (MQ=255) aTTGATCGAGCATCCGGGGCAAACCTGGACCATGGAGAACATGGCCGCTTGCACCGGGTTGTCACGGTCGGCTTTTTTCAAGCGTTTCAGCGAGCTGGCCGGGCAGTCACCGGGACAAGTGCTGCTGGCGCTgcgc < 5:36841/136‑1 (MQ=255) ttGATCGAGCATCCGGGGCAAACCTGGACCATGGAGAACATGGCCGCTTGCACCGGGTTGTCACGGTCGGCTTTTTTCAAGCGTTTCAGCGAGCTGGCCGGGCAGTCACCGGGACAAGTGCTGCTGGCGCTGCGCATGCGCCATgccag > 4:148498/1‑149 (MQ=255) gcgcGAGCCTCCGGGGCAAACCTGGACCATGGAGAACATGGCCGCTTGCACCGGGTTGTCACGGTCGGCTTTTTTCAAGCGTTTCAGCGAGCTGGCCGGGCAGTCACCGGGACAAGTGCTGCTGGCGCTGCGCATGCGCCATgccagc < 8:276544/145‑1 (MQ=255) gATCGAGCATCCGGGGCAAACCTGGACCATGGAGAACATGGCCGCTTGCACCGGGTTGTCACGGTCGGCTTTTTTCAAGCGTTTCAGCGAGCTGGCCGGGCAGTCACCGGGACAAGTGCTGCTGGCGCTGCGCATGCGCCATgccagc < 2:241433/148‑1 (MQ=255) aTCGAGCATCCGGGGCAAACCTGGACCATGGAGAACATGGCCGCTTGCACCGGGTTGTCACGGTCGGCTTTTTTCAAGCGTTTCAGCGAGCTGGCCGGGCAGTCACCGGGACAAGTGCTGCTGGCATGGCGCATGCGCAGCgccagcag < 3:29045/149‑3 (MQ=255) aGCATCCGGGGCAAACCTGGACCATGGAGAACATGGCCGCTTGCACCGGGTTGTCACGGTCGGCTTTTTTCAAGCGTTTCAGCGAGCTGGCCGGGCAGTCACCGGGACAAGTGCTGCTGGCGCTGCGCATGCGCCATgccag > 1:234068/1‑142 (MQ=255) aGCATCCGGGGCAAACCTGGACCATGGAGAACATGGCCGCTTGCACCGGGTTGTCACGGTCGGCTTTTTTCAAGCGTTTCAGCGAGCTGGCCGGGCAGTCACCGGGACAAGTGCTGCTGGCGCTGCGCATGCGCCATgccag < 2:234068/142‑1 (MQ=255) cATCCGGGGCAAACCTGGACCATGGAGAACATGGCCGCTTGCACCGGGTTGTCACGGTCGGCTTTTTTCAAGCGTTTCAGCGAGCTGGCCGGGCAGTCACCGGGACAAGTGCTGCTGGCGCTGCGCATGCGCCATGCCAGCCAGTtgct < 3:128591/149‑1 (MQ=255) gcGGGGCAAACCTGGACCATGGAGAACATGGCCGCTTGCACCGGGTTGTCACGGTCGGCTTTTTTCAAGCGTTTCAGCGAGCTGGCCGGGCAGTCACCGGGACAAGTGCTGCTGGCGCTGCGCATGCGCCATgc < 8:234406/133‑1 (MQ=255) ccGGGGCAAACCTGGACCATGGAGAACATGGCCGCTTGCACCGGGTTGTCACGGTCGGCTTTTTTCAAGCGTTTCAGCGAGCTGGCCGGGCAGTCACCGGGACAAGTGCTGCTGGCGCTGCGCATGCGCCATgc > 7:234406/1‑134 (MQ=255) cGGGGCAAACCTGGACCATGGAGAACATGGCCGCTTGCACCGGGTTGTCACGGTCGGCTTTTTTCAAGCGTTTCAGCGAGCTGGCCGGGCAGTCACCGGGACAAGTGCTGCTGGCGCTGCGCATGCGCCATGCCAGCCAGTTGCTGCAg > 5:111662/1‑149 (MQ=255) gggCAAACCTGGACCATGGAGAACATGGCCGCTTGCACCGGGTTGTCACGGTCGGCTTTTTTCAAGCGTTTCAGCGAGCTGGCCGGGCAGTCACCGGGACAAGTGCTGCTGGCGCTGCGCATGCGCCATGCCAGCCAGTTGCTGCAGGc < 6:204689/149‑1 (MQ=255) gCAAACCTGGACCATGGAGAACATGGCCGCTTGCACCGGGTTGTCATGGTCGGCTTTTTTCAAGCGTTACAGCGAGCTGGCCGGGCAGTCACCGGGACAAGTGCTGCTGGCGCTGCGCATGCGCCATGCCAGCCAGTTGCTGCAGGCgg > 1:27012/1‑149 (MQ=255) gCAAACCTGGACCATGGAGAACATGGCCGCTTGCACCGGGTTGTCACGGTCGGCTTTTTACAAGCGTTTCAGCGAGCTGGCCGGGCAGTCACCGGGACAAGTGCTGCTGGCGCTGCGCATGCGCCATGCCAGCCAGTtgctgc < 2:305027/143‑1 (MQ=255) gCAAACCTGGACCATGGAGAACATGGCCGCTTGCACCGGGTTGTCACGGTCGGCTTTTTACAAGCGTTTCAGCGAGCTGGCCGGGCAGTCACCGGGACAAGTGCTGCTGGCGCTGCGCATGCGCCATGCCAGCCAGTtgctgc > 1:309705/1‑143 (MQ=255) gCAAACCTGGACCATGGAGAACATGGCCGCTTGCACCGGGTTGTCACGGTCGGCTTTTTACAAGCGTTTCAGCGAGCTGGCCGGGCAGTCACCGGGACAAGTGCTGCTGGCGCTGCGCATGCGCCATGCCAGCCAGTtgctgc > 1:305027/1‑143 (MQ=255) gCAAACCTGGACCATGGAGAACATGGCCGCTTGCACCGGGTTGTCACGGTCGGCTTTTTACAAGCGTTTCAGCGAGCTGGCCGGGCAGTCACCGGGACAAGTGCTGCTGGCGCTGCGCATGCGCCATGCCAGCCAGTtgctgc < 2:309705/143‑1 (MQ=255) cAAACCTGGACCATGGAGAACATGGCCGCTTGCACCGGGTTGTCACGGTCGGCTTTTTTCAAGCGTTTCAGCGAGCTGGCCGGGCAGTCACCGGGACAAGTGCTGCTGGCGCTGCGCATGCGCCATGCCAGCCAGTTGCTGCAGGCggg < 2:155803/149‑1 (MQ=255) aaaCCTGGACCATGGAGAACATGGCCGGTTGCACCGGGTTGTCACGGTCGGCTTTTTTCAAGCGTTTCAGCGAGCTGGCCGGGCAGTCACCGGGACAAGTGCTGCTGGCGCTGCGCATGCGCCATGCCAGCCAGTTGCTGCAGGCgggg < 4:134028/149‑1 (MQ=255) aCCTGGACCATGGAGAACATGGCCGCTTGCACCGGGTTTTCCCGGTCGGCTTTTTTCAAGCGTTTCAGCGAGCTGGCCGGGCAGTCACCGGGACAAGTGCTGCTGGCGCTGCGCATGCGCCATGCCAGCCAGTTGCTGCAGGCGGGGCa < 4:237248/149‑1 (MQ=255) ggACCATGGAGAACATGGCCGCTTGCACCGGGTTGTCACGGTCGGCTTTTTTCAAGCGTTTCAGCGAGCTGGCCGGGCAGTCACCGGGACAAGTGCTGCTGGCGCTGCGCATGCGCCATGCCAGCCAGTTGCTGCAGGCGGGGCATAcc > 5:207907/1‑149 (MQ=255) ccATGGAGAACATGGCCGCTTGCACCGGGTTGTCACGGTCGGCTTTTTTCAAGCGTTTCAGCGAGCTGGCCGGGCAGTCACCGGGACAAGTGCTGCTGGCGCTGCGCATGCGCCATGCCAGCCAGTTGCTGCAGGCGGGGCATACCGtt < 1:197652/149‑1 (MQ=255) aTGGAGAACATGGCCGCTTGCACCGGGTTGTCACGGTCGGCTTTTTTCAAGCGTTTCAGCGAGCTGGCCGGGCAGTCACCGGGACAAGTGCTGCTGGCGCTGCGCATGCGCCATGCCAGCCAGTTGCTGCAGGCGGGGCATACCGTTGa < 7:120523/149‑1 (MQ=255) agaACATGGCCGCTTGCACCGGGTTGTCACGGTCGGCTTTTTTCAAGCGTTTCAGCGAGCTGGCCGGGCAGTCACCGGGACAAGTGCTGCTGGCGCTGCGCATGCGCCATGCCAGCCAGTTGCTGCAGGCGGGGCATACCGTTGAGCAg > 8:59307/1‑149 (MQ=255) cATGGCCGCTTGCACCGGGTTGTCACGGTCGGCTTTTTTCAAGCGTTTCAGCGAGCTGGCCGGGCAGTCACCGGGACAAGTGCTGCTGGCGCTGCGCATGCGCCATGCCAGCCAGTTGCTGCAGGCGGGGCATACCGtt < 6:183506/139‑1 (MQ=255) cATGGCCGCTTGCACCGGGTTGTCACGGTCGGCTTTTTTCAAGCGTTTCAGCGAGCTGGCCGGGCAGTCACCGGGACAAGTGCTGCTGGCGCTGCGCATGCGCCATGCCAGCCAGTTGCTGCAGGCGGGGCATACCGtt > 5:183506/1‑139 (MQ=255) aTGGCCGCTTGCACCGGGTTGTCACGGTCGGCTTTTTTCAAGCGTTTCAGCGAGCTGGCCGGGCAGTCACCGGGACAAGTGCTGCTGGCGCTGCGCATGCGCCATGCCAGCCAGTTGCTGCAGGCGGGGCATACCGTTGAGCAGGTAgg > 7:270319/1‑149 (MQ=255) aTGGCCGCTTGCACCGGGTTGTCACGGTCGGCTTTTTTCAAGCGTTTCAGCGAGCTGGCCGGGCAGTCACCGGGACAAGTGCTGCTGGCGCTGCGCATGCGCCATGCCAGCCAGTTGCTGCAGGCGGGGCATACCGTTGAGCAGGTAgg < 7:179532/149‑1 (MQ=255) tGGCCGCTTGCACCGGGTTGTCACGGTCGGCTTTTTTCAAGCGTTTCAGCGAGCTGGCCGGGCAGTCACCGGGACAAGTGCTGCTGGCGCTGCGCATGCGCCATGCCAGCGAGTTGCTGCAGGCGGGGCATACCGTTGAGCAGGTAGgc < 8:217050/149‑1 (MQ=255) ccGCTTGCACCGGGTTGTCACGGTCGGCTTTTTTCAAGCGTTTCAGCGAGCTGGCCGGGCAGTCACCGGGACAAGTGCTGCTGGCGCTGCGCATGCGCCATGCCAGCCAGTTGCTGCAGGCGGGGCATACCGTTGAGCAGGTAGgcgcg > 3:303609/1‑149 (MQ=255) gCTTGCACCGGGTTGTCACGGTCGGCTTTTTTGAAGCGTTTCAGCGAGCTGGCCGGGCAGTCACCGGGACAAGTGCTGCTGGCGCTGCGCATGCGCCATGCCAGCCAGTTGCTGCAGGCGGGGCATACCGTTGAGCAGGTAGGCGCGCa < 4:196852/149‑1 (MQ=255) ttGCACCGGGTTGTCACGGTCGGCTTTTTTCAAGCGTTTCAGCGAGCTGGCCGGGCAGTCACCGGGACAAGTGCTGCTGGCGCTGCGCATGCGCCATGCCAGCCAGGTGCTGCAGGCGGGGCATACCGTTGAGCAGGTAGGCGCGCAgg > 8:212935/1‑149 (MQ=255) cGGGTTGTCACGGTCGGCTTTTTTCAAGCGTTTCAGCGAGCTGGCCGGGCAGTCACCGGGACAAGTGCTGCTGGCGCTGCGCATGCGCCATGCCAGCCAGTTGCTGCAGGCGGGGCATACCGTTGAGCAGGTAGGCGCGCAGGTgggg > 6:251060/1‑148 (MQ=255) aCGGTCGGCTTTTTTCAAGCGTTTCAGCGAGCTGGCCGGGCAGTCACCGGGACAAGTGCTGCTGGCGCTGCGCATGCGCCATGCCAGCCAGTTGCTGCAGGCGGGGCATACCGTTGAGCAGGTAGGCGCGCAGGTGGGGTATCAGTCg < 1:1993/148‑1 (MQ=255) aCGGTCGGCTTTTTTCAAGCGTTTCAGCGAGCTGGCCGGGCAGTCACCGGGACAAGTGCTGCTGGCGCTGCGCATGCGCCATGCCAGCCAGTTGCTGCAGGCGGGGCATACCGTTGAGCAGGTAGGCGCGCAGGTGGGGTATCAGTCg < 5:304994/148‑1 (MQ=255) cGGTCGGCTTTTTTCAAGCGTTTCAGCGAGCTGGCCGGGCAGTCACCGGGACAAGTGCTGCTGGCGCTGCGCATGCGCCATGCCAGCCAGTTGCTGCAGGCGGGGCATACCGTTGAGCAGGTAGGCGCGCAGGTGGGGTATCAGTCGGt < 4:303609/149‑1 (MQ=255) ttttttCAAGCGTTTCAGCGAGCTGGCCGGGCAGTCACCGGGACAAGTGCTGCTGGCGCTGCGCATGCGCCATgcca > 7:295673/1‑77 (MQ=255) ttttttCAAGCGTTTCAGCGAGCTGGCCGGGCAGTCACCGGGACAAGTGCTGCTGGCGCTGCGCATGCGCCATgcca < 8:295673/77‑1 (MQ=255) tttCAAGCGTTTCAGCGAGCTGGCCGGGCAGTCACCGGGACAAGTGCTGCTGGCGCTGCGCATGCGCCATGCCAGCCAGTTGCTGCAGGCGGGGCATACCGtt < 3:160519/103‑1 (MQ=255) tttCAAGCGTTTCAGCGAGCTGGCCGGGCAGTCACCGGGACAAGTGCTGCTGGCGCTGCGCATGCGCCATGCCAGCCAGTTGCTGCAGGCGGGGCATACCGTTGAGCAGGTAGGCGCGCAGGTGGGGTATCAGTCGGTGGCCGCATTCa > 1:23109/1‑149 (MQ=255) tttCAAGCGTTTCAGCGAGCTGGCCGGGCAGTCACCGGGACAAGTGCTGCTGGCGCTGCGCATGCGCCATGCAAGCCAGTTGCTGCAGGCGGGGCATACCGtt > 4:160519/1‑103 (MQ=255) | GCAGGGCAATCGCTGGGCGGGCTGGTCGCCCTCGCCCGCCAGCCGGCATTTGCCGGATTGCTTGAGCAATTGATCGAGCATCCGGGGCAAACCTGGACCATGGAGAACATGGCCGCTTGCACCGGGTTGTCACGGTCGGCTTTTTTCAAGCGTTTCAGCGAGCTGGCCGGGCAGTCACCGGGACAAGTGCTGCTGGCGCTGCGCATGCGCCATGCCAGCCAGTTGCTGCAGGCGGGGCATACCGTTGAGCAGGTAGGCGCGCAGGTGGGGTATCAGTCGGTGGCCGCATTCA > NC_002947/4136344‑4136635 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |