| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,704,312 | G→C | 6.5% | S284R (AGC→AGG) | kdpA ← | potassium‑transporting ATPase subunit A |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,704,312 | 0 | G | C | 6.5% | 195.6 / 4.5 | 62 | S284R (AGC→AGG) | kdpA | potassium‑transporting ATPase subunit A |
| Reads supporting (aligned to +/- strand): ref base G (30/28); new base C (2/2); total (32/30) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.35e-01 | |||||||||||
CCGAAGCGGCTTTCCTTGCCCTCCAGAGGGGCGGTCTGTTGCACCTGCGTGCTTTCCAGGGCCGGGTTCGGCTGATGCTCGGACCACAGCGCCGTGCTGCCACC‑GATCAGGAACAGGGCAAGCATGCAGGCGAGGATGGCGCGGCTCTGACGCAGGTCCTTCACGTAGTGACCGAAGGTGAACACCAATGCCACTGGAATGAGGATGATCGATGCCACCTCGAACAGGTTGCTCCAGGCCGTTGGGTTTTCGAACGGGTGCGCCGAGTTGACGCCGAAGAAGCCACCGC > NC_002947/4704169‑4704457 | ccGAAGCGGCTTTCCTTGCCCTCCAGAGGGGCGGTCTGTTGCACCTGCGTGCTTTCCAGGGCCGGGTTCGGCTGATGCTCGGACCACAGCGCCGTGCTGCCACC‑GATCAGGAACAGGGCAAGCATGCAGGCGAGGATGGCGCGGctct > 4:72931/1‑148 (MQ=255) cGGCTTTCCTTGCCCTCCAGAGGGGCGGTCTGTTGCACCTGCGTGCTTTCCAGGGCCGGGTTCGGCTGATGCTCGGACCACAGCGCCGTGCTGCCACC‑GATCAGGAACAGGGCAAGCATGCAGGCGAGGATGGCGCGGCTCTGACGCAg < 4:211050/149‑1 (MQ=255) tttCCTTGCCCTCCAGAGGGGCGGTCTGTTGCACCTGCGTGCTTTCCAGGGCCGGGTTCGGCTGATGCTCGGACCACAGCGCCGTGCTGCCACC‑GATCAGGAACAGGGCAAGCATGCAGGCGAGGATGGCGCGGCTCTGACGCAGGTcc > 8:296077/1‑149 (MQ=255) cTTGCCCTCCAGAGGGGCGGTCTGTTGCACCTGCGTGCTTTCCAGGGCCGGGTTCGGCTGATGCTCGGACCACAGCGCCGTGCTGCCACC‑GATCAGGAACAGGGCAAGCATGCAGGCGAGGATGGCGCGGCTCTGACGCAGGTCCTTc < 4:271782/148‑1 (MQ=255) ccTCCAGAGGGGCGGTCTGTTGCACCTGCGTGCTTTCCAGGGCCGGGTTCGGCTGATGCTCGGACCACAGCGCCGTGCTGCCACC‑GATCAGGAACAGGGCAAGCATGCAGGCGAGGATGGCGCGGCTCTGACGCAGGTCCTTCACGTAg < 8:47099/149‑1 (MQ=255) ccTCCAGAGGGGCGGTCTGTTGCACCTGCGTGCTTTCCAGGGCCGGGTTCGGCTGATGCTCGGACCACAGCGCCGTGCTGCCACC‑GATCAGGAACAGGGCAAGCATGCAGGCGAGGATGGCGCGGCTCTGACGCAGGTCCTTCACGTAg < 5:144635/149‑1 (MQ=255) cTCCAGAGGGGCGGTCTGTTGCACCTGCGTGCTTTCCAGGGCCGGGTTCGGCTGATGCTCGGACCACAGCGCCGTGCTGCCACC‑GATCAGGAACAGGGCAAGCATGCAGGCGAGGATGGCGCGGCTCTGACGCAGGTCCTTCActacgt < 3:298520/149‑6 (MQ=255) cTCCAGAGGGGCGGTCTGTTGCACCTGCCTGCTTTCCAGGGCCGGGTTCGGCTGATGCTCGGACCACAGCGCCGTGCTGCCACC‑GATCAGGAACAGGGCAAGCATGCAGGCGAGGATGGCGCGGCTCTGACGCAGGTCCTTCACGTAGt > 1:181875/1‑149 (MQ=255) cAGAGGGGCGGTCTGTTGCACCTGCGTGCTTTCCAGGGCCGGGTTCGGCTGATGCTCGGACCACAGCGCCGTGCTGCCACC‑GATCAGGAACAGGGCAAGCATGCAGGCGAGGATGGCGCGGCTCTGACGCAGGTCCTTCACGTAGTGAc < 4:154660/149‑1 (MQ=255) ggggCGGTCTGTTGCACCTGCGTGCTTTCCAGGGCCGGGTTCGGCTGATGCTCGGACCACAGCGCCGTGCTGCCACC‑GATCAGGAACAGGGCAAGCATGCAGGCGAGGATGGCGCGGCTCTGACGCAGGTCCTTCACGTAGTGACCg > 7:90271/1‑147 (MQ=255) gggCGGTCTGTTGCACCTGCGTGCTTTCCAGGGCCGGGTTCGGCTGATGCTCGGACCACAGCGCCGTGCTGCCACC‑GATCAGGAACAGGGCAAGCATGCAGGCGAGGATGGCGCGGCTCTGACGCAGGTCCTTCACGTAGTGACCGAAg < 8:90271/149‑1 (MQ=255) gCGGTCTGTTGCACCTGCGTGCTTTCCAGGGCCGGGTTCGGCTGATGCTCGGACCACAGCGCCGTGCTGCCACC‑GATCAGGAACAGGGCAAGCATGCAGGCGAGGATGGCGCGGCTCTGACGCAGGTCCTTCACGTAGTGACCGAAGGt > 6:64367/1‑149 (MQ=255) cGGTCTGTTGCACCTGCGTGCTTTCCAGGGCCGGGTTCGGCTGATGCTCGGACCACAGCGCCGTGCTGCCACC‑GATCAGGAACAGGGCAAGCATGCAGGCGAGGATGGCGCGGCTCTGACGCAGGTCCTTCACGTAGTGACCGAAGGTg < 8:292293/149‑1 (MQ=255) tGTTGCACCTGCGTGCTTTCCAGGGCCGGGTTCGGCTGATGCTCGGACCACAGCGCCGTGCTGCCACC‑GATCAGGAACAGGGCAAGCATGCAGGCGAGGATGGCGCGGCTCTGACGCAGGTCCTTCACGTAGTGACCGAAGGTGCacac > 5:140425/1‑149 (MQ=255) ttGCACCTGCGTGCTTTCCAGGGCCGGGTTCGGCTGATGCTCGGACCACAGCGCCGTGCTGCCACC‑GATCAGGACCCGGGCAAGCATGCAGGCGAGGATGGCGCGGCTCTGACGCAGGTCCTTCACGTAGTGACCGAAGGTGAaca < 1:265839/146‑1 (MQ=255) ttGCACCTGCGTGCTTTCCAGGGCCGGGTTCGGCTGATGCTCGGACCACAGCGCCGTGCTGCCACC‑GATCAGGAACAGGGCAAGCATGCAGGCGAGGATGGCGCGGCTCTGACGCAGGTCCTTCACGTAGTGACCGAAGGTGAACAcc > 2:295209/1‑148 (MQ=255) gCACCTGCGTGCTTTCCAGGGCCGGGTTCGGCTGATGCTCGGACCACAGCGCCGTGCTGCCACC‑TATCAGGAACAGGGCAAGCATGCAGGCGAGGATGGCGCGGCTCTGACGCAGGTCCTTCACGTAGTGACCGAAGGTTAACACCaa < 2:86216/148‑1 (MQ=255) tGCGTGCTTTCCAGGGCCGGGTTCGGCTGATGCTCGGACCACAGCGCCGTGCTGCCACC‑GATCAGGAACAGGGCAAGCATGCAGGCGAGGATGGCGCGGCTCTGACGCAGGTCCTTCACGTAGTGACCGAAGGTGAACACCAATGCCAc > 2:261994/1‑149 (MQ=255) gCGTGCTTTCCAGGGCCGGGTTCGGCTGATGCTCGGACCACAGCGCCGTGCTGCCACC‑GATCAGGAACAGGGCAAGCATGCAGGCGAGGATGGCGCGGCTCTGACGCAGGTCCTTCACGTAGTGACCGAAGGTGAACACCAATGCCACt > 3:83867/1‑149 (MQ=255) tGCTTTCCAGGGCCGGGTTCGGCTGATGCTCGGACCACAGCGCCGTGCTGCCACC‑GATCAGGAACAGGGCAAGCATGCAGGCGAGGATGGCGCGGCTCTGACGCAGGTCCTTCACGTAGTGACCGAAGGTGAACACCAATGCCACTGGa < 3:72931/149‑1 (MQ=255) cTTTCCAGGGCCGGGTTCGGCTGATGCTCGGACCACAGCGCCGTGCTGCCACC‑GATCAGGAACAGGGCAAGCATGCAGGCGAGGATGGCGCGGCTCTGACGCAGGTCCTTCACGTAGTGACCGAAGGTGAACACCAATGCCACTGGa > 2:88406/1‑147 (MQ=255) cTTTCCAGGGCCGGGTTCGGCTGATGCTCGGACCACAGCGCCGTGCTGCCACC‑GATCAGGAACAGGGCAAGCATGCAGGCGAGGATGGCGCGGCTCTGACGCAGGTCCTTCACGTAGTGACCGAAGGTGAACACCAATGCCACTGGa < 1:88406/147‑1 (MQ=255) cTTTCCAGGGCCGGGTTCGGCTGATGCTCGGACCACAGCGCCGTGCTGCCACC‑GATCAGGAACAGGGCAAGCATGCAGGCGAGGATGGCGCGGCTCTGACGCAGGTCCTTCACGTAGTGACCGAAGGTGAACACCAATGCCACTGGAAt > 4:106993/1‑149 (MQ=255) ccAGGGCCGGGTTCGGCTGATGCTCGGACCACAGCGCCGTGCTGCCACC‑GATCAGGAACAGGGCAAGCATGCAGGCGAGGATGGCGCGGCTCTGACGCAGGTCCTTCACGTAGTGACCGAAGGTGAACACCAATGCCACTGGAATGAg > 3:251507/1‑148 (MQ=255) cAGGGCCGGGTTCGGCTGATGCTCGGACCACAGCGCCGTGCTGCCACC‑GATCAGGAACAGGGCAAGCATGCAGGCGAGGATGGCGCGGCTCTGACGCAGGTCCTTCACGTAGTGACCGAAGGTGAACACCAATGCCACTGGAATGAgg < 7:296077/148‑1 (MQ=255) cAGGGCCGGGTTCGGCTGATGCTCGGACCACAGCGCCGTGCTGCCACC‑GATCAGGAACAGGGCAAGCATGCAGGCGAGGATGGCGCGGCTCTGACGCAGGTCCTTCACGTAGTGACCGAAGGTGAACACCAATGCCACTGGAATGAGga > 8:60611/1‑149 (MQ=255) ggCCGGGTTCGGCTGATGCTCGGACCACAGCGCCGTGCTGCCACC‑GATCAGGAACAGGGCAAGCATGCAGGCGAGGATGGCGCGGCTCTGACGCAGGTCCTTCACGTAGTGACCGAAGGTGAACACCAATGCCACTGGAATGAGgatga < 4:83867/149‑1 (MQ=255) ccGGGTTCGGCTGATGCTCGGACCACAGCGCCGTGCTGCCACCGGATCAGGAACAGGGCAAGCATGCAGGCGAGGATGGCGCGGCTCTGACGCAGGTCCTTCACGTAGTGACCGAAGGTGAACACCAATGCCACTg > 1:67754/1‑136 (MQ=255) ccGGGTTCGGCTGATGCTCGGACCACAGCGCCGTGCTGCCACC‑GATCAGGAACAGGGCAAGCATGCAGGCGAGGATGGCGCGGCTCTGACGCAGGTCCTTCACGTAGTGACCGAAGGTGAACACCAATGCCACTg < 2:67754/135‑1 (MQ=255) ggTTCGGCTGATGCTCGGACCACAGCGCCGTGCTGCCACC‑GATCAGGAACAGGGCAAGCATGCAGGCGAGGATGGCGCGGCTCTGACGCAGGTCCTTCACGTAGTGACCGAAGGTGAACACCAATGCCACTg < 2:43067/132‑1 (MQ=255) ggTTCGGCTGATGCTCGGACCACAGCGCCGTGCTACCACC‑GATCAGGAACAGGGCAAGCATGCAGGCGAGGATGGCGCGGCTCTGACGCAGGTCCTTCACGTAGTGACCGAAGGTGAACACCAATGCCACTg > 1:43067/1‑132 (MQ=255) aTGCTCGGACCACAGCGCCGTGCTGCCACC‑GATCAGGAACAGGGCAAGCATGCAGGCGAGGATGGCGCGGCTCTGACGCAGGTCCTTCACGTAGTGACCGAAGGTGAACACCAATGCCACTGGAATGAGGATGATCGATGCCACCTCg > 7:39041/1‑148 (MQ=255) ggACCACAGCGCCGTGCTGCCACC‑GATCAGGAACAGGGCAAGCATGCAGGCGAGGATGGCGCGGCTCTGACGCAGGTCCTTCACGTAGTGACCGAAGGTGAACACCAATGCCACTGGAATGAGGATGATCGATGCCACCTCGAACAgg < 4:251507/148‑1 (MQ=255) ggACCACAGCGCCGTGCTGCCACC‑GATCAGGAACAGGGCAAGCATGCAGGCGAGGATGGCGCGGCTCTGACGCAGGTCCTTCACGTAGTGACCGAAGGTGAACACCAATGCCACTGGAATGAGGATGATCGATGCCACCTCGAACAGGt < 5:64367/149‑1 (MQ=255) acaGCGCCGTGCTGCCACC‑GATCAGGAACAGGTCAAGCATGCAGGCGAGGATGGCGCGCCTCTGACGCAGGTCCTTCACGTAGTGACCGAAGGTGAACACCAATGCCACTGGAATGa < 4:251429/117‑1 (MQ=255) acaGCGCCGTGCTGCCACC‑GATCAGGAACAGGGCAAGCATGCAGGCGAGGATGGCGCGCCTCTGACGCAGGTCCTTCACGTAGTGACCGAAGGTGAACACCAATGCCACTGGAATGa > 3:251429/1‑117 (MQ=255) acaGCGCCGTGCTGCCACC‑GATCAGGAACAGGGCAAGCATGCAGGCGAGGATGGCGCGCCTCTGACGCAGGTCCTTCACGTAGTGACCGAAGGTGAACACCAATGCCACTGGAATGa < 4:255871/117‑1 (MQ=255) acaGCGCCGTGCTGCCACC‑GATCAGGAACAGGGCAAGCATGCAGGCGAGGATGGCGCGCCTCTGACGCAGGTCCTTCACGTAGTGACCGAAGGTGAACACCAATGCCACTGGAATGa > 3:255871/1‑117 (MQ=255) aGCGACGTGCTGCCACC‑GATCAGGAACAGGGCAAGCATGCAGGCGAGGATGGCGCGGCTCTGACGCAGGTCCTTCACGTAGTGACCGAAGGTGAACACCAATGCCACTGGAATGAGGATGATCGATGCCACCTCGAACAGGTTGCTCCa < 8:214807/149‑1 (MQ=255) ctgcCACC‑GATCAGGAACAGGGCAAGCATGCAGGCGAGGATGGCGCGGCTCTGACGCAGGTCCTTCACGTAGTGACCGAAGGTGAACACCAATGCCACTGGAATGAGGATGATCGATGCCACCTCGAACAGGt > 5:98668/1‑133 (MQ=255) ctgcCACC‑GATCAGGAACAGGGCAAGCATGCAGGCGAGGATGGCGCGGCTCTGACGCAGGTCCTTCACGTAGTGACCGAAGGTGAACACCAATGCCACTGGAATGAGGATGATCGATGCCACCTCGAACAGGt < 6:98668/133‑1 (MQ=255) ccACC‑GATCAGGAACAGGGCAAGCATGCAGGCGAGGATGGCGCGGCTCTGACGCAGGTCCTTCACGTAGTGACCGAAGGTGAACACCAATGCCACTGGAATGAGGATGATCGATGCCACCTCGAACAGGTTGCTCCAGGCCGTTGGGtt > 6:139787/1‑149 (MQ=255) c‑GATGAGGAACAGGGCAAGCATGCAGGCGAGGATGGCGCGGCTCTGACGCAGGTCCTTCACGTAGTGACCGAAGGTGAACCCCAATGGCCCTGGAATGAGGATGATCGATGCCACGTCGAACAGGTTGCTCCAGGCCGTTGGGTTGTCg > 2:117159/1‑149 (MQ=255) gAACAGGGCAAGCATGCAGGCGAGGATGGCGCGGCTCTGACGCAGGTCCTTCACGTAGTGACCGAAGGTGAACACCAATGCCACTGGAATGAGGATGATCGATGCCACCTCGAACAGGTTGCTCCAGGCCGTTGGGTTTTCGAACGGGt < 1:295209/149‑1 (MQ=255) gAACAGGGCAAGCATGCAGGCGAGGATGGCGCGGCTCTGACGCAGGTCCTTCACGTAGTGACCGAAGGTGAACACCAATGCCACTGGAATGAGGATGATCGATGCCACCTCGAACAGGTTGCTCCAGGCCGTTGGGTTTTCGAACGGGt > 5:17956/1‑149 (MQ=255) gAACAGGGCAAGCATGCAGGCGAGGATGGCGCGGCTCTGACGCAGGTCCTTCACGTAGTGACCGAAGGTGAACACCAATGCCACTGGAATGAGGATGATCGATGCCACCTCGAACAGGTTGCTCCAGGCCGTTGGGTTTTCGAACGGGt < 2:181875/149‑1 (MQ=255) aGGGCAAGCATGCAGGCGAGGATGGCGCGGCTCTGACGCAGGTCCTTCACGTAGTGACCGAAGGTGAACACCAATGCCACTGGAATGAGGATGATCGATCCCACCTCCAACAGGTTGCTCCAGGCCGTTGGGTTTTCGAACGCGTgcgc > 5:244824/1‑149 (MQ=255) ggCAAGCATGCAGGCGAGGATGGCGCGGCTCTGACGCAGGTCCTTCACGTAGTGACCGAAGGTGAACACCAATGCCACTGGAATGAGGATGATCGATGCCACCTCGAACAGGTTGCTCCAGGCCGTTGGGTTTTCGAACGGGTGCGcc > 5:281547/1‑148 (MQ=255) gCAAGCATGCAGGCGAGGATGGCGCGGCTCTGACGCAGGTCCTTCACGTAGTGACCGAAGGTGAACACCAATGCCACTGGAATGAGGATGATCGATGCCACCTCGAACAGGTTGCTCCAGGCCGTTGGGTTTTCGAACGGGTGCGcc > 6:281224/1‑147 (MQ=255) cATGCAGGCGAGGATGGCGCGGCTCTGACGCAGGTCCTTCACGTAGTGACCGAAGGTGAACACCAATGCCACTGGAATGAGGATGATCGATGCCACCTCGAACAGGTTGCTCCAGGCCGTTGGGTTTTCGAACGGGTGCGCCGAGTTGa < 1:121039/149‑1 (MQ=255) aGGCGAGGATGGCGCGGCTCTGACGCAGGTCCTTCACGTAGTGACCGAAGGTGAACACCAATGCCACTGGAATGAGGATGATCGATGCCACCTCGAACAGGTTGCTCCAGGCCGTTGGGTTTTCGAACGGGTGCGCCGAGTTGACGcc > 6:277551/1‑148 (MQ=255) ggCGAGGATGGCGCGGCTCTGACGCAGGTCCTTCACGTAGTGACCGAAGGTGAACACCAATGCCACTGGAATGAGGATGATCGATGCCACCTCGAACAGGTTGCTCCAGGCCGTTGGGTTTTCGAACGGGTGCGCCGAGTTGACGCCg > 3:291782/1‑148 (MQ=255) gCGAGGATGGCGCGGCTCTGACGCAGGTCCTTCACGTAGTGACCGAAGGTGAACACCAATGCCACTGGAATGAGGATGATCGATGCCACCTCGAACAGGTTGCTCCAGGCCGTTGGGTTTTc < 1:223961/122‑1 (MQ=255) gCGAGGATGGCGCGGCTCTGACGCAGGTCCTTCACGTAGTGACCGAAGGTGAACACCAATGCCACTGGAATGAGGATGATCGATGCCACCTCGAACAGGTTGCTCCAGGCCGTTGGGTTTTc > 2:223961/1‑122 (MQ=255) gCGAGGATGGCGCGGCTCTGACGCAGGTCCTTCACGTAGTGACCGAAGGTGAACACCAATGCCACTGGAATGAGGATGATCGATGCCACCTCGAACAGGTTGCTCCAGGCCGTTGGGTTTTCTAACGGGTGCGCCGAGTTGACGCCg > 4:211560/1‑147 (MQ=255) gAGGATGGCGCGGCTCTGACGCAGGTCCTTCACGTAGTGACCGAAGGTGAACACCAATGCCACTGGAATGAGGATGATCGATGCCACCTCGAACAGGTTGCTCCAgg > 4:97021/1‑107 (MQ=255) agtaTGCCGCGGCTCTGACGCAGGTCCTTCACGTAGTGACCCAAGGTTAACACCAATGCCACTGGAATGAGGATGATCGATGCCACCTCGAACAGGTTGCTCCAGGCCGTTGGGTTTTCGAACGGGTGCGCCGAGTTGACGCCgaagaa < 8:53941/146‑1 (MQ=255) aGGATGGCGCGGCTCTGACGCAGGTCCTTCACGTAGTGACCGAAGGTGAACACCAATGCCACTGGAATGAGGATGATCGATGCCACCTCGAACAGGTTGCTCCAGGCCGTTGGGTTTTCGAACGGGTGCGCCGAGTTGACGCCgaagaa < 7:307/149‑1 (MQ=255) aGGATGGCGCGGCTCTGACGCAGGTCCTTCACGTAGTGACCGAAGGTGAACACCAATGCCACTGGAATGAGGATGATCGATGCCACCTCGAACAGGTTGCTCCAGGCCGTTGGGTTTTCGAACGGGTGCGCCGAGTTGACGCCgaagaa < 1:261994/149‑1 (MQ=255) gcgGCTCTGACGCAGGTCCTTCACGTAGTGACCGAAGGTGAACACCAATGCCACTGGAATGAGGATGATCGATGCCACCTCGAACAg < 1:288365/87‑1 (MQ=255) gcgGCTCTGACGCAGGTCCTTCACGTAGTGACCGAAGGTGAACACCAATGCCACTGGAATGAGGATGATCGATGCCACCTCGAACAg > 2:288365/1‑87 (MQ=255) gcgGCTCTGACGCAGGTCCTTCACGTAGTGACCGAAGGTGAACACCAATGCCACTGGAATGAGGATGATCGATGCCACCTCGAACAGGTTGCTCCAGGCCGTTGGGTTTTCGAACGGGTGCGCCGAGTTGACGCCGAAGAAGCCACCGc > 5:206148/1‑149 (MQ=255) | CCGAAGCGGCTTTCCTTGCCCTCCAGAGGGGCGGTCTGTTGCACCTGCGTGCTTTCCAGGGCCGGGTTCGGCTGATGCTCGGACCACAGCGCCGTGCTGCCACC‑GATCAGGAACAGGGCAAGCATGCAGGCGAGGATGGCGCGGCTCTGACGCAGGTCCTTCACGTAGTGACCGAAGGTGAACACCAATGCCACTGGAATGAGGATGATCGATGCCACCTCGAACAGGTTGCTCCAGGCCGTTGGGTTTTCGAACGGGTGCGCCGAGTTGACGCCGAAGAAGCCACCGC > NC_002947/4704169‑4704457 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |