| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,793,968 | A→T | 6.7% | intergenic (‑129/+27) | pvdI ← / ← PP_4222 | non‑ribosomal peptide synthetase/protein SyrP |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,793,968 | 0 | A | T | 6.7% | 216.8 / 4.6 | 75 | intergenic (‑129/+27) | pvdI/PP_4222 | non‑ribosomal peptide synthetase/protein SyrP |
| Reads supporting (aligned to +/- strand): ref base A (40/30); new base T (2/3); total (42/33) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.49e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.98e-01 | |||||||||||
GTGAGTCTTGGGCGTTCATGCTCGGGGTCCTTACTGATCTGCAGCTCGGCCGTGCGGCCAAAGCGTTTCCAGTAGAACGAGCGGAGGGAGGGCGAATTTAACGCGGCAGCGCCATGCCCGGACGCTGCGCTGGCGAGCGCCTGCGGCAAGCCGCAAGCACTCGCCACAGTGGCCTCAAAGCGCCGCTTCGCGGTGCCCCTGAGCCATGGCCACGACCACTTTGCGTGGCCCGGTGAACG‑GTGCCCGGGCGTGCGCCGCGAGCATGTTGTCGAGCATCAGCACGTCGTTTTCCTGC > NC_002947/4793821‑4794115 | gtgagtCTTGGGCGTTCATGCTCGGGGTCCTTACTGATCTGCAGCTCGGCCGTGCGGCCAAAGCGTTTCCAGTAGAACGAGCGGAGGGAGGGCGAATTTAACGCGGCAGCGCCATGCCCGGACGCTGCGCTGGCGAGCGCCTGCGGCaa > 6:178914/1‑149 (MQ=255) agtCTTGGGCGTTCATGCTCGGGGTCCTTACTGATCTGCAGCTCGGCCGTGCGGCCAAAGCGTTTCCAGTAGAACGAGCGGAGGGAGGGCGAATTTAAAGCGGCAGCGCCATGCCCGGACGCTGCGCTGGCGAGCGCCTGCGGCAAGcc > 4:21041/1‑149 (MQ=255) ttGGGCGTTCATGCTCGGGGTCCTTACTGATCTGCAGCTCGGCCGTGCGGCCAAAGCGTTTCCAGTAGAACGAGCGGAGGGAGGGCGAATTTAACGCGGCAGCGCCATGCCCGGACGCTGCGCTGGCGAGCGCCTGCGGCAAGCCGc > 4:31012/1‑147 (MQ=255) gggCGTTCATGCTCGGGGTCCTTACTGATCTGCAGCTCGGCCGTGCGGCCAAAGCGTTTCCAGTAGAACGAGCGGAGGGAGGGCGAATTTAACGCGGCAGCGCCATGCCCGGACGCTGCGCTGGCGAGCGCCTGCGGCTTGCCGCagg < 1:320564/148‑3 (MQ=255) gggCGTTCATGCTCGGGGTCCTTACTGATCTGCAGCTCGGCCGTGCGGCCAAAGCGTTTCCAGTAGAACGAGCGGAGGGAGGGCGAATTTAACGCGGCAGCGCCATGCCCGGACGCTGCGCTGGCGAGCGCCTGCGGCAAGCCGCAAg < 3:123782/148‑1 (MQ=255) gTTCATGCTCGGGGTCCTTACTGATCTGCAGCTCGGCCGTGCGGCCAAAGCGTTTCCAGTAGAACGAGCGGAGGGAGGGCGAATTTAACTCGGCAGCGCCATGACCGGAAGCTGCGCTGGCGAGCGCCTGAGGCAAGCCgcacgcacat > 2:119453/1‑147 (MQ=255) gTTCATGCTCGGGGTCCTTACTGATCTGCAGCTCGGCCGTGCGGCCAAAGCGTTTCCAGTAGAACGAGCGGAGGGAGGGCGAATTTAACGCGGCAGCGCCATGCCCGGACGCTGCGCTGGCGAGCGCCTGCGGCAAGCCGCAAGCACTc < 3:102217/149‑1 (MQ=255) tCATGCTCGGGGTCCTTACTGATCTGCAGCTCGGCCGTGCGGCCAAAGCGTTTCCAGTAGAACGAGCGGAGGGAGGGCGAATTTAACGCGGCAGCGCCATGCCCGGACGCTGCGCTGGTGAGCGCCTGCGGCAAGCCGCAAGCACTCGc > 1:263088/1‑149 (MQ=255) cATGCTCGGGGTCCTTACTGATCTGCAGCTCGGCCGTGCGGCCAAAGCGTTTCCAGTAGAACGAGCGGAGGGAGGGCGAATTTAACGCGGCAGCGCCATGCCCGGACGCTGCGCTGGCGAGCGCCTGCGGCAAGCCGCAAGCACTCGc > 8:39150/1‑148 (MQ=255) tGCTCGGGGTCCTTACTGATCTGCAGCTCGGCCGTGCGGCCAAAGCGTTTCCAGTAGAACGAGCGGAGGGAGGGCGAATTTAACGCGGCAGCGCCATGCCCGGACGCTGCGCTGGCGAGTGCTTGCGGCTTGCCGCAGGCGCTCGCcag < 5:88350/149‑2 (MQ=39) gggTCCTTACTGATCTGCAGCTCGGCCGTGCGGCCAAAGCGTTTCCAGTAGAACGAGCGGAGGGAGGGCGAATTTAACGCGGCAGCGCCATGCCCGGACGCTGCGCTGGCGAGCGCCTGCGGCAAGCCGCAAGCACTCGCCACAGTGGc < 5:11525/149‑1 (MQ=255) ccTTACTGATCTGCAGCTCGGCCGTGCGGCCAAAGCGTTTCCAGTAGAACGAGCGGAGGGAGGGCGAATTTAACGCGGCAGCGCCATGCCCGGACGCTGCGCTGGCGAGCGCCTGCGGCAAGCCGCAAGCACTCGCCACAGTGGCCTc > 3:211746/1‑148 (MQ=255) cTTACTGATCTGCAGCTCGGCCGTGCGGCCAAAGCGTTTCCAGTAGAACGAGCGGAGGGAGGGCGAATTTAACGCGGCAGCGCCATGCCCGGACGCTGCGCTGGCGAGCGCCTGCGGCAAGCCGCAAGCACTCGCCACAGTGGCCTCa > 2:197869/1‑148 (MQ=255) cTTACTGATCTGCAGCTCGGCCGTGCGGCCAAAGCGTTTCCAGTAGAACGAGCGGAGGGAGGGCGAATTTAACGCGGCAGCGCCATGCCCGGACGCTGCGCTGGCGAGCGCCTGCGGCAAGCCGCAAGCACTCGCCACAGTGGCCTCa > 7:128889/1‑148 (MQ=255) cTTACTGATCTGCAGCTCGGCCGTGCGGCCAAAGCGTTTCCAGTAGAACGAGCGGAGGGAGGGCGAATTTAACGCGGCAGCGCCATGCCCGGACGCTGCGCTGGCGAGCGCCTGCGGCAAGCCGCAAGCACTCGCCACAGTGGCCTCa > 2:145788/1‑148 (MQ=255) aCTGATCTGCAGCTCGGCCGTGCGGCCAAAGCGTTTCCAGTAGAACGAGCGGAGGGAGGGCGAATTTAACGCGGCAGCGCCATGCCCGGACGCTGCGCTGGCGAGCGCCTGCGGCAAGCCGCAAGCACTCGCCACAGTGGCCTCAAAgc > 2:53523/1‑149 (MQ=255) tGATCTGCAGCTCGGCCGTGCGGCCAAAGCGTTTCCAGTAGAACGAGCGGAGGGAGGGCGAATTTAACGCGGCAGCGCCATGCCCGGACGCTGCGCTGGCGAGCGCCTGCGGCAAGCCGCAAGCACTCGCCACAGTGGCCTCAAAgcgc > 6:205212/1‑149 (MQ=255) tGATCTGCAGATCGGCCGTGCGGCCAAAGCGTTTCCAGTAGAACGAGCGGAGGGAGGGCGAATTTAACGCGGCAGCGCCATGCCCGGACGCTGCGCTGGCGAGCGCCTGCGGCAAGCCGCAAGCACTCGCCACAGTGGCCTCAAAgcgc > 1:115316/1‑149 (MQ=255) cTGCAGCTCGGCCGTGCGGCCAAAGCGTTTCCAGTAGAACGAGCGGAGGGAGGGCGAATTTAACGCGGCAGCGCCATGCCCGGACGCTGCGCTGGCGAGCGCCTGCGGCAAGCCGCAAGCACTCGCCACAGTGGCCTCAAAGCGCCGCt > 8:171269/1‑149 (MQ=255) gCAGCTCGGCCGTGCGGCCAAAGCGTTTCCAGTAGAACGAGCGGAGGGAGGGCGAATTTAACGCGGCAGCGCCATGCCCGGACGCTGCGCTGGCGAGCGCCTGCGGCAAGCCGCAAGCACTCGCCACAGTGGc > 1:52217/1‑133 (MQ=255) gCAGCTCGGCCGTGCGGCCAAAGCGTTTCCAGTAGAACGAGCGGAGGGAGGGCGAATTTAACGCGGCAGCGCCATGCCCGGACGCTGCGCTGGCGAGCGCCTGCGGCAAGCCGCAAGCACTCGCCACAGTGGc < 2:52217/133‑1 (MQ=255) gCAGCTCGGCCGTGCGGCCAAAGCGTTTCCAGTAGAACGAGCGGAGGGAGGGCGAATTTAACGCGGCAGCGCCATGCCCGGACGCTGCGCTGGCGAGCGCCTGCGGCAAGCCGCAAGCACTCGCCACAGTGGCCTCAAAGCGCCGCTTc > 5:75868/1‑149 (MQ=255) cAGCTCGGCCGTGCGGCCAAAGCGTTTCCAGTAGAACGAGCGGAGGGAGGGCGAATTTAACGCGGCAGCGCCATGCCCGGACGCTGCGCTGGCGAGCGCCTGCGGCAAGCCGCAAGCACTCGCCACAGTGGCCTCAAAGCGCCGCtt < 6:257308/147‑1 (MQ=255) tttggCCGCACGGCCAAAGCGTTTCCAGTAGAACGAGCGGAGGGAGGGCGAATTTAACGCGGCAGCGCCATGCCCGGACGCTGCGCTGGCGAGCGCCTGCGGCAAGCCGCAAGCACTCGCCACAGTGGCCTCAAAGCGCCGCTTCGCgg > 7:225232/4‑149 (MQ=255) cTCGGCCGTGCGGCCAAAGCGTTTCCAGTAGAACGAGCGGAGGGAGGGCGAATTTAACGCGGCAGCGCCATGCCCGGACGCTGCGCTGGCGAGCGCCTGCGGCAAGCCGCAAGCACTCGCCACAGTGGCCTCAAAGCGCCGCTTCGCgg > 1:294236/1‑149 (MQ=255) ggCCGTGCGGCCAAAGCGTTTCCAGTAGAACGAGCGGAGGGAGGGCGAATTTAACGCGGCAGCGCCATGCCCGGACGCTGCGCTGGCGAGCGCCTGCGGCAAGCCGCAAGCACTCGCCACAGTGGCCTCAAAGCGCCGCTTCGCGGTGc < 7:141861/149‑1 (MQ=255) gTGCGGCCAAAGCGTTTCCAGTAGAACGAGCGGAGGGAGGGCGAATTTAACGCGGCAGCGCCATGCCCGGACGCTGCGCTGGCGAGCGCCTGCGGCAAGCCGCAAGCACTCGCCACAGTGGc < 1:320500/122‑1 (MQ=255) tGCGGCCAAAGCGTTTCCAGTAGAACGAGCGGAGGGAGGGCGAATTTAACGCGGCAGCGCCATGCCCGGACGCTGCGCTGGCGACCCCCAGCGGCAAACCCCAAACACACGCCACACAGGCCACAAAACCCCGCATAGCCGTGccc > 2:164358/1‑146 (MQ=255) cGGCCAAAGCGTTTCCAGTAGAACGAGCGGACGGAGGGCGAATTTAACGCGGCAGCGCCATGCCCGGACGCTGCGCTGGCGAGCGCCTGCGGCAAGCCGCAAGCACTCGCCACAGTGGCCTCAAAGCGCCGCTTCGCGGTGCCCCTGAg < 6:75550/149‑1 (MQ=255) ggCCAAAGCGTTTCCAGTAGAACGAGCGGAGGGAGGGCGAATTTAATGCGGCAGCGCCATGCCCGGACGCTGCGCTGGCGAGCGCCTGCGGCAAGCCGCAAGCACTCGCCACAGTGGCCTCAAAGCGCCGCTTCGCGGTGCCCCTGAGc > 1:279606/1‑149 (MQ=255) gCCAAAGCGTTTCCAGTAGAACGAGCGGAGGGAGGGCGAATTTAACGCGGCAGCGCCATGCCCGGACGCTGCGCTGGCGAGCGCCTGCGGCAAGTCGCAAGCACTCGCCACAGTGGCCTCAAAGCGCCGCTTCGCGGTGCCCCTGAGc > 4:14794/1‑148 (MQ=255) cAAAGCGTTTCCAGTAGAACGAGCGGAGGGAGGGCGAATTTAACGCGGCAGCGCCATGCCCGGACGCTGCGCTGGCGAGCGCCTGCGGCAAGCCGCAAGCACTCGCCACAGTGGCCTCAAAGCGCCGCTTCGCGGTGCCCCTGAGCCAt > 6:86763/1‑149 (MQ=255) aaaGCGTTTCCAGTAGAACGAGCGGAGGGAGGGCGAATTTAACGCGGCAGCGCCATGCCCGGACGCTGCGCTGGCGAGCGCCTGCGGCAAGCCGCAAGCACTCGCCACAGTGGCCTCAAAGCGCCGCTTCGCGGTGCCCCTGAGCCATg > 6:177129/1‑149 (MQ=255) gTAGAACGAGCGGAGGGAGGGCGAATTTAACGCGGCAGCGCCATGCCCGGACGCTGCGCTGGCGAGCGCCTGCGGCAAGCCGCAAGCCCTCGCCACAGTGGCCTCAAAGCGCCGCTTCGCGGTGCCCCTGCGCCATGGCCACGACCCCt > 4:304477/1‑149 (MQ=255) tAGAACGAGCGGAGGGAGGGCGGATTTAACGCGGCAGCGCCATGCCCGGACGCTGCGCTGGCGAGCGCCTGCGGCAAGCCGCAAGCACTCGCCACAGTGGCCTCAAAGCGCCGCTTCGCGGTGCCCCTGAGCCATGGCCACGACCACtt > 8:21399/1‑149 (MQ=255) tAGAACGAGCGGAGGGAGGGCGAATTTAACGCGGCAGCGCCATGCCCGGACGCTGCGCTGGCGAGCGCCTGCGGCAAGCCGCAAGCACTCGCCACAGTGGCCTCAAAGCGCCGCTTCGCGGTGCCCCTGAGCCATGGCCAc < 1:281067/141‑1 (MQ=255) tAGAACGAGCGGAGGGAGGGCGAATTTAACGCGGCAGCGCCATGCCCGGACGCTGCGCTGGCGAGCGCCTGCGGCAAGCCGCAAGCACTCGCCACAGTGGCCTCAAAGCGCCGCTTCGCGGTGCCCCTGAGCCATGGCCAc > 2:281067/1‑141 (MQ=255) gAACGAGCGGAGGGAGGGCGAATTTAACGCGGCAGCGCCATGCCCGGACGCTGCGCTGGCGAGCGCCTGCGGCAAGCCGCAAGCACTCGCCACAGTGGCCTCAAAGCGCCGCTTCGCGGTGCCCCTGAGCCATGGCCACGACCACttt < 1:53523/148‑1 (MQ=255) gAACGAGCGGAGGGAGGGCGAATTTAACGCGGCAGCGCCATGCCCGGACGCTGCGCTGGCGAGCGCCTGCGGCAAGCCGCAAGCACTCGCCACAGTGGCCTCAAAGCGCCGCTTCGCGGTGCCCCTGAGCCATGGCCACGACCACTTTg > 3:84830/1‑149 (MQ=255) aaCGAGCGGAGGGAGGGCGAATTTAACGCGGCAGCGCCATGCCCGGACGCTGCGCTGGCGAGCGCCTGCGGCAAGCCGCAAGCACTCGCCACAGTGGCCTCAAAGCGCCGCTTCGCGGTGCCCCTGAGCCATGGCCACGACCACTTTGc < 5:177129/149‑1 (MQ=255) aaCGAGCGGAGGGAGGGCGAATCTAACGCGGCAGCGCCATGCCCGGACGCTGCGCTGGCGAGCGCCTGCGGCAAGCCGCAAGCACTCGCCACAGTGGCCTCAAAGCGCCGCTTCGCGGTGCCCCTGAGCCATGGCCACGACCACTTTGc > 7:47402/1‑149 (MQ=255) gAGCGGAGGGAGGGCGAATTTAACGCGGCAGCGCCATGCCCGGACGCTGCGCTGGCGAGCGCCTGCGGCAAGCCGCAAGCACTCGCCACAGTGGCCTCAAAGCGCCGCTTCGCGGTGCCCCTGAGCCATGGCCACGACCACTTtgtgtg < 5:178914/149‑1 (MQ=255) ggagggagGGCGAATTTAACGCGGCAGCGCCATGCCCGGACGCTGCGCTGGCGAGCGCCTGCGGCAAGCCGCAAGCACTCGCCACAGTGGCCTCAAAGCGCCGCTTCGCGGTGCCCCTGAGCCATGGCCACGACCACTTTGCGTGGccc > 7:86668/1‑149 (MQ=255) agggCGAATTTAACGCGGCAGCGCCATGCCCGGACGCTGCGCTGGCGAGCGCCTGCGGCAAGCCGCAAGCACTCGCCACAGTGGCCTCAAAGCGCCGCTTCGCGGTGCCCCTGAGCCATGGCCACGACCACTTTGCGTGGCCCGGTGaa > 3:240554/1‑149 (MQ=255) gggCGAATTTAACGCGGCAGCGCCATGCCCGGACGCTGCGCTGGCGAGCGCCTGCGGCAAGCCGCAAGCACTCGCCACAGTGGCCTCAAAGCGCCGCTTCGCGGTGCCCCTGAGCCATGGCCACGACCACTTTGCGTGGCCCGGTGAAc < 5:205212/149‑1 (MQ=255) gAATTTAACGCGGCAGCGCCATGCCCGGACGCTGCGCTGGCGAGCGCCTGCGGCAAGCCGCAAGCACTCGCCACAGTGGCCTCAAAGCGCCGCTTCGCGGTGCCCCTGAGCCATGGCCACGACCACttt > 3:49876/1‑129 (MQ=255) gAATTTAACGCGGCAGCGCCATGCCCGGACGCTGCGCTGGCGAGCGCCTGCGGCAAGCCGCAAGCACTCGCCACAGTGGCCTCAAAGCGCCGCTTCGCGGTGCCCCTGAGCCATGGCCACGACCACttt < 4:49876/129‑1 (MQ=255) gAATTTAACGCGGCAGCGCCATGCCCGGACGCTGCGCTGGCGAGCGCCTGCGGCAAGCCGCAAGCACTCGCCACAGTGGCCTCAAAGCGCCGCTTCGCGGTGCCCCTGAGCCATGGCCACGACCACTTTGCGTGGCCCGGTGAACG‑GTg > 2:25732/1‑149 (MQ=255) aaTTTAACGCGGCAGCGCCATGCCCGGACGCTGCGCTGGCGAGCGCCTGCGGCAAGCCGCAAGCACTCGCCACAGTGGCCTCAAAGCGCCGCTTCGCGGTGCCCCTGAGCCATGGCCACGACCACTTTGCGTGGCCCGGTGAACG‑GTGc > 3:30503/1‑149 (MQ=255) ttAACGCGGCAGCGCCATGCCCGGACGCTGCGCTGGCGAGCGCCTGCGGCAAGCCGCAAGCACTCGCCACAGTGGCCTCAAAGCGCCGCTTCGCGGTGCCCCTGAGCCATGGCCACGACCACTTTGCGTGGCCCGGTGAACG‑GTGCCCg > 1:49044/1‑149 (MQ=255) cgcgGCAGCGCCATGCCCGGACGCTGCGCTGGCGAGCGCCTGCGGCAAGCCGCAAGCACTCGCCACAGTGGCCTCAAAGCGCCGCTTCGCGGTGCCCCTGAGCCATGGCCACGACCACTTTGCGTGGCCCGGTGAACG‑GTGCCCGGGCg < 4:30503/149‑1 (MQ=255) ggCAGCGCCATGCCCGGACGCTGCGCTGGCGAGCGCCTGCGGCAAGCCGCAAGCACTCGCCACAGTGGCCTCAAAGCGCCGCTTCGCGGTGCCCCTGAGCCATGGCCACGACCACTTTGCGTGGCCCGGTGAACG‑GTGCCCGGGCGTgc < 8:128889/149‑1 (MQ=255) gCAGCGCCATGCCCGGACGCTGCGCTGGCGAGCGCCTGCGGCAAGCCGCAAGCACTCGCCACAGTGGCCTCAAAGCGCCGCTTCGCGGTGCCCCTGAGCCATGGCCACGACCACTTTGCGTGGCCCGGTGAACG‑GTGCCCGGGCGTgcg < 3:21041/149‑1 (MQ=255) ccATGCCCGGACGCTGCGCTGGCGAGCGCCTGCGGCAAGCCGCAAGCACTCGCCACAGTGGCCTCAAAGCGCCGCTTCGCGGTGCCCCTGAGCCATGGCCACGACCACTTTGCGTGGCCCGGTGAACG‑GTGCCCGGGCGTGcgccgc > 1:122291/1‑147 (MQ=255) ccATGCCCGGACGCTGCGCTGGCGAGCGCCTGCGGCAAGCCGCAAGCACTCGCCACAGTGGCCTCAAAGCGCCGCTTCGCGGTGCCCCTGAGCCATGGCCACGACCACTTTGCGTGGCCCGGTGAACG‑GTGCCCGGGCGTGCGCCGCGa < 5:86763/149‑1 (MQ=255) cATGCCCGGACGCTGCGCTGGCGAGCGCCTGCGGCAAGCCGCAAGCACTCGCCACAGTGGCCTCAAAGCGCCGCTTCGCGGTGCCCCTGAGCCATGGCCACGACCACTTTGCGTGGCCCGGTGAACG‑GTGCCCGGGCGTGCGCCGCGAg < 4:211746/149‑1 (MQ=255) gACGCTGCGCTGGCGAGCGCCTGCGGCAAGCCGCAAGCACTCGCCACAGTGGCCTCAAAGCGCCGCTTCGCGGTGCCCCTGAGCCATGGCCACGACCACTTTGCGTGGCCCGGTGAACG‑GTGCCCGGGCGTGCGCCGCGAGCAtgttgt < 8:47402/149‑1 (MQ=255) aCGCTGCGCTGGCGAGCGCCTGCGGCAAGCCGCAAGCACTCGCCACAGTGGCCTCAAAGCGCCGCTTCGCGGTGCCCCTGAGCCATGGCCACGACCACTTTGCGTGGCCCGGTGAACG‑GTGCCCGGGCGTGCGCCGCGAGCATGTTGTc < 2:294236/149‑1 (MQ=255) cgctgcgctgGGGAGCGCCTGCGGCAAGCCGCAAGCACTCGCCACAGTGGCCTCAAAGCGCCGCTTCGCGGTGCCCCTGAGCCATGGCCACGACCACTTTGCGTGGCCCGGTGAACG‑GTGCCCGGGCGTGCGCCGCGAGCATGTTGTCg < 2:263088/149‑1 (MQ=255) tgcgctgGCGAGCGCCTGCGGCAAGCCGCAAGCACTCGCCACAGTGGCCTCAAAGCGCCGCTTCGCGGTGCCCCTGAGCCATGGCCACGACCACTTTGCGTGGCCCGGTGAACG‑GTGCCCGGGCGTGCGCCGCGAGCATGTTGTCGAg > 4:233428/1‑148 (MQ=255) tgcgctgGCGAGCGCCTGCGGCAAGCCGCAAGCACTCGCCACAGTGGCCTCAAAGCGCCGCTTCGCGGTGCCCCTGAGCCATGGCCACGACCACTTTGCGTGGCCCGGTGAACG‑GTGCCCGGGCGTGCGCCGCGAGCATGTTGTCGAg > 4:100477/1‑148 (MQ=255) cgctgGCGAGCGCCTGCGGCAAGCCGCAAGCACTCGCCACAGTGGCCTCAAAGCGCCGCTTCGCGGTGCCCCTGAGCCATGGCCACGACCACTTTGCGTGGCCCGGTGAACG‑GTGCCCGGGCGTGCGCCGCGAGCATGTTGTCGAGc < 1:164358/147‑1 (MQ=255) cgctgGCGAGCGCCTGCGGCAAGCCGCAAGCACTCGCCACAGTGGCCTCAAAGCGCCGCTTCGCGGTGCCCCTGAGCCATGGCCACGACCACTTTGCGTGGCCCGGTGAACG‑GTGCCCGGGCGTGCGCCGCGAGCATGTTGTCGAGCa < 8:225232/148‑1 (MQ=255) ctgGCGAGCGCCTGCGGCAAGCCGCAAGCACTCGCCACAGTGGCCTCAAAGCGCCGCTTCGCGGTGCCCCTGAGCCATGGCCACGACCACTTTGCGTGGCCCGGTGAACG‑GTGCCCGGGCGTGCGCCGCGAGCATGTTGTCGAGCAt > 1:37921/1‑147 (MQ=255) ctgGCGAGCGCCTGCGGCAAGCCGCAAGCACTCGCCACAGTGGCCTCAAAGCGCCGCTTCGCGGTGCCCCTGAGCCATGGCCACGACCACTTTGCGTGGCCCGGTGAACG‑GTGCCCGGGCGTGCGCCGCGAGCATGTTGTCGAGCATCa < 2:37921/149‑1 (MQ=255) gCGAGTGCTTGCGGCTTGCCGCAGGCACTCGCCACAGTGGCCTCAAAGCGCCGCTTCGCGGTGCCCCTGAGCCATGGCCACGACCACTTTGCGTGGCCCGGTGAACG‑GTGCCCGGGCGTGCGCCGCGAGCATGTTGTCGAGCATCAGCa > 6:298995/1‑149 (MQ=255) gCGAGCGCCTGCGGCAAGCCGCAAGCACTCGCCACAGTGGCCTCAAAGCGCCGCTTCGCGGTGCCCCTGCGCCATGGCCACGACCACTTTGCGTGGCCCGGTGAACG‑GTGCCCGGGCGTGCGCCGCGAGCATGTTGTCGAGCATCAGCa > 7:237214/1‑149 (MQ=255) gAGCGCCTGCGGCAAGCCGCAAGCACTCGCCACAGTGGCCTCAAAGCGCCGCTTCGCGGTGCCCCTGAGCCATGGCCACGACCACTTTGCGTGGCCCGGTGAACG‑GTGCCCGGGCGTGCGCCGCGAGCATGTTGTCGAGCATCAGCAcg > 8:197394/1‑149 (MQ=255) tgcttGCGGCTTGCCGCAAGCACTCGCCACAGTGGCCTCAAAGCGCCGCTTCGCGGTGCCCCTGAGCCATGGCCACGACCACTTTGCGTGGCCCGGTGAACGTGTGCCCGGGCGTGCGCCGCGAGCATGTTGTCGAGCATCAGCAcgtc < 1:236101/145‑1 (MQ=255) tgcttGCGGCTTGCCGCAAGCACTCGCCACAGTGGCCTCAAAGCGCCGCTTCGCGGTGCCCCTGAGCCATGGCCACGACCACTTTGCGTGGCCCGGTGAACG‑GTGCCCGGGCGTGCGCCGCGAGCATGTTGTCGAGCATCAGCAcgtc > 2:236101/5‑148 (MQ=255) ccTGCGGCAAGCCGCAAGCACTCGCCACAGTGGCCTCAAAGCGCCGCTTCGCGGTGCCCCTGAGCCATGGCCACGACCACTTTGCGTGGCCCGGTGAACG‑GTGCCCGGGCGTGCGCCGCGAGCATGTTGTCGAGCATCAGCACGTCGtt < 2:122291/149‑1 (MQ=255) cTGCGGCAAGCCGCAAGCACTCGCCACAGTGGCCTCAAAGCGCCGCTTCGCGGTGCCCCTGAGCCATGGCCACGACCACTTTGCGTGGCCCGGTGAATG‑GTGCCCGGGCGTGCGCCGCGAGCATGTTGTCGAGCATCAGCACGTCGttt < 2:115316/149‑1 (MQ=255) cGGCAAGTCGCAAGCACTCGCCACAGTGGCCTCAAAGCGCCGCTTCGCGGTGCCCCTGAGCCATGGCCACGACCACTTTGCGTGGCCCGGTGAACG‑GTGCCCGGGCGTGCGCCGCGAGCATGTTGTCGAGCATCAGCACGTCGTTTTcc < 3:14794/149‑1 (MQ=255) cGGCAAGCCGCAAGCACTCGCCACAGTGGCCTCAAAGCGCCGCTTCGCGGTGCCCCTGAGCCATGGCCACGACCACTTTGCGTGGCCCGGTGAACG‑GTGCCCGGGCGTGCGCCGCGAGCATGTTGTCGAGCATCAGCACGTCGTTTTcc < 1:197869/149‑1 (MQ=255) ggCAAGCCGCAAGCACTCGCCACAGTGGCCTCAAAGCGCCGCTTCGCGGTGCCCCTGAGCCATGGCCACGACCACTTTGCGTGGCCCGGTGAACG‑GTGCCCGGGCGTGCGCCGCGAGCATGTTGTCGAGCATCAGCACGTCGTTTTCCt > 1:324795/1‑149 (MQ=255) cAAGCCGCAAGCACTCGCCACAGTGGCCTCAAAGCGCCGCTTCGCGGTGCCCCTGAGCCATGGCCACGACCACTTTGCGTGGCCCGGTGAACG‑GTGCCCGGGCGTGCGCCGCGAGCATGTTGTCGAGCATCAGCACGTCGTTTTCCTGc < 2:49044/149‑1 (MQ=255) | GTGAGTCTTGGGCGTTCATGCTCGGGGTCCTTACTGATCTGCAGCTCGGCCGTGCGGCCAAAGCGTTTCCAGTAGAACGAGCGGAGGGAGGGCGAATTTAACGCGGCAGCGCCATGCCCGGACGCTGCGCTGGCGAGCGCCTGCGGCAAGCCGCAAGCACTCGCCACAGTGGCCTCAAAGCGCCGCTTCGCGGTGCCCCTGAGCCATGGCCACGACCACTTTGCGTGGCCCGGTGAACG‑GTGCCCGGGCGTGCGCCGCGAGCATGTTGTCGAGCATCAGCACGTCGTTTTCCTGC > NC_002947/4793821‑4794115 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |