| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 338,068 | A→C | 6.2% | S167R (AGT→AGG) | PP_0280 ← | amino acid ABC transporter permease |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 338,068 | 0 | A | C | 6.2% | 199.5 / 4.3 | 65 | S167R (AGT→AGG) | PP_0280 | amino acid ABC transporter permease |
| Reads supporting (aligned to +/- strand): ref base A (24/36); new base C (2/2); total (26/39) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.99e-01 | |||||||||||
AAGCCTTGCACCAGCATGAACGAGATCACCAGGTAGAACACGCCTGCGGCGAAGAAGATTTCCACCGGCAGGTAGGTGCGGGCGATGATGGTACGGGCCATGCCGGTCAGTTCCAGCAGGGTCACGGTACTGGCCAGGGCACTGGCCTTGAGCATCAGGATCACTTCGTTGCTGTACGCCGGCAGGCCGATGCGCGCAGCGCGTGGCAGCATGATGTAGAACAGCGTTTTGCCACGCGACATGCCCAGCGCCCGTGCCGCTTCAATCTCACCTTTAGGGATCGCCTGCA > NC_002947/337928‑338216 | aaGCCTTGCACCAGCATGAACGAGATCACCAGGTAGAACACGCCTGCGGCGAAGAAGATTTCCACCGGCAGGTAGGTGCGGGCGATGATGGTACGGGCCATGCCGGTCAGTTCCAGCAGGGTCACGGTACTGGCCAGGGCACTGGCCtt < 8:50673/149‑1 (MQ=255)aaGCCTTGCACCAGCATGAACGAGATCACCAGGTAGAACACGCCTGCGGCGAAGAAGATTTCCACCGGCAGGTAGGTGCGGGCGATGATGGTACGGGCCATGCCGGTCAGTTCCAGCAGGGTCACGGTACTGGCCAGGGCACTGGCCtt < 6:90019/149‑1 (MQ=255)aaGCCTTGCACCAGCATGAACGAGATCACCAGGTAGAACACGCCTGCGGCGAAGAAGATTTCCACCGGCAGGTAGGTGCGGGCGATGATGGTACGGACCATGCCGGTCAGTTCCAGCAGGGTCACGGTACTGGCCAGGGCACTGGCCtt < 7:275548/149‑1 (MQ=255) gCCTTGCACCAGCATGAACGAGATCACCAGGTAGAACACGCCTGCGGCGAAGAAGATTTCCACCGGCAGGTAGGTGCGGGCGATGATGGTACGGGCCATGCCGGTCAGTTCCAGCAGGGTCACGGTACTGGCCAGTGCCCTGGccagta < 5:266268/149‑5 (MQ=255) cTTGCACCAGCATGAACGAGATCACCAGGTAGAACACGCCTGCGGCGAAGAAGATTTCCACCGGCAGGTAGGTGCGGGCGATGATGGTACGGGCCATGCCGGTCAGTTCCAGCAGGGTCACGGTACTGGCCAGGGCACTGGCCTTGAGc < 4:41682/149‑1 (MQ=255) caccacCATGATCGAGATCACCAGGTAGAACACGCCTGCGGCGAAGAAGATTTCGACCGGCAGGTAGGTGCGGGCGATGATGGTACGGGCCATGCCGGTCAGTTCCAGCAGGGTCACGGTACTGGCCAGGGCACTGGCCTTGAGCATc < 6:4319/148‑1 (MQ=255) cACCAGCATGAACGAGATCACCAGGTAGAACACGCCTGCGGCGAAGAAGATTTCCACCGGCAGGTAGGTGCGGGCGATGATGGTACGGGCCATGCCGGTCAGTTCCAGCAGGGTCACGGTACTGGCCAGGGCACTGGCCTTGAGCATc < 3:30075/148‑1 (MQ=255) ccAGCATGAACGAGATCACCAGGTAGAACACGCCTGCGGCGAAGAAGATTTCCACCGGCAGGTAGGTGCGGGCGATGATGGTACGGGCCATGCCGGTCAGTTCCAGCAGGGTCACGGTACTGGCCAGGGCACTGGCCTTGAGCATCAgg < 7:227146/149‑1 (MQ=255) ccAGCATGAACGAGATCACCAGGTAGAACACGCCTGCGGCGAAGAAGATTTCCACCGGCAGGTAGGTGCGGGCGATGATGGTACGGGCCATGCCGGTCAGTTCCAGCAGGGTCACGGTACTGGCCAGGGCACTGGCCTTGAGCATCAgg < 3:22846/149‑1 (MQ=255) cATGAACGAGATCACCAGGTAGAACACGCCTGCGGCGAAGAAGATTTCCACCGGCAGGTAGGTGCGGGCGATGATGGTACGGGCCATGCCGGTCAGTTCCAGCAGGGTCACGGTACTGGCCAGGGCACTGGCCTTGAGCATCAGGATCa > 4:50288/1‑149 (MQ=255) aCGAGATCACCAGGTAGAACACGCCTGCGGCGAAGAAGATTTCCACCGGCAGGTAGGTGCGTGCGATGATGGTACGGGCCATGCCGGGCAGTTCCATCAGGGTCACGGTGCTGGCCATGGCACTGGCCTTGAGCATCAGGATCACTTCg < 2:45208/149‑1 (MQ=255) cGAGATCACCAGGTAGAACACGCCTGCGGCGAAGAAGATTTCCACCGGCAGGTAGGTGCGGGCGATGATGGTACGGGCCATGCCGGTCAGTTCCAGCAGGGTCACGGTACTGGCCAGGGCACTGGCCTTGAGCATCAGGATCACTTCGt < 4:61369/149‑1 (MQ=255) gagaTCACCAGGTAGAACACGCCTGCGGCGAAGAAGATTTCCACCGGCAGGTAGGTGCGGGCGATGATGGTACGGGCCATGCCGGTCAGTTCCAGCAGGGCCACGGTACTGGCCAGGGCACTGGCCTTGAGCATCAGGATCACTTCGtt > 8:265046/1‑149 (MQ=255) agaTCACCAGGTAGAACACGCCTGCGGCGAAGAAGATTTCCACCGGCAGGTAGGTGCGGGCGATGATGGTACGGGCCATGCCGGTCAGTTCCAGCAGGGTCACGGTACTGGCCAGGGCACTGGCCTTGAGCATCAGGATCACTTCGTTg < 4:269499/149‑1 (MQ=255) gaTCACCAGGTAGAACACGCCTGCGGCGAAGAAGATTTCCACCGGCTGGTAGGTGCGGGCGATGATGGTACGGGCCATGCCGGTCAGATCCAGCAGGCTCACGGTACAGGCCAGGGCACTGGCCTAGAGCATCAGGATCACTTCGTTGc > 7:73117/1‑149 (MQ=255) gaTCACCAGGTAGAACACGCCTGCGGCGAAGAAGATTTCCACCGGCAGGTAGGTGCGGGCGATGATGGTACGGGCCATGCCGGTCAGTTCCAGCAGGGTCACGGTACTGGCCAGGACACTGGCCTTGAGCATCAGGATCACTTCGTTGc > 6:228101/1‑149 (MQ=255) tCACCAGGTAGAACACGCCTGCGGCGAAGAAGATTTCCACCGGCAGGTAGGTGCGGGCGATGATGGTACGGGCCATGCCGGTCAGTTCCAGCAGGGTCACGGTACTGGCCAGGGCACTGGCCTTGAGCATCAGGATCACTTCGTTGCTg < 2:137737/149‑1 (MQ=255) aCCAGGTAGAACACGCCTGCGGCGAAGAAGATTTCCACCGGCAGGTAGGTGCGGGCGATGATGGTACGGGCCATGCCGGTCAGTTCCAGCAGGGTCACGGTACTGGCCAGGGCACTGGCCTTGAGCATCAGGATCa > 7:20067/1‑136 (MQ=255) aCCAGGTAGAACACGCCTGCGGCGAAGAAGATTTCCACCGGCAGGTAGGTGCGGGCGATGATGGTACGGGCCATGCCGGTCAGTTCCAGCAGGGTCACGGTACTGGCCAGGGCACTGGCCTTGAGCATCAGGATCa < 8:20067/136‑1 (MQ=255) aCCAGGTAGAACACGCCTGCGGCGAAGAAGATTTCCACCGGCAGGTAGGTGCGGGCGATGATGGTACGGGCCATGCCGGTCAGTTCCAGCAGGGTCACGGTACTGGCCAGGGCACTGGCCTTGAGCATCAGGATCACTTCGTTGCTGTa > 6:299714/1‑149 (MQ=255) cAGGTAGAACACGCCTGCGGCGAAGAAGATTTCCACCGGCAGGTAGGTGCGGGCGATGATGGTACGGGCCATGCCGGTCAGTTCCAGCAGGGTCACGGTACTGGCCAGGGCACTGGCCTTGAGCATCAGGATCACTTCGTTGCTGTACg > 6:20019/1‑149 (MQ=255) ggTAGAACACGCCTGCGGCGAAGAAGATTTCCACCGGCAGGTAGGTGCGGGCGATGATGGTACGGGCCATGCCGGTCAGTTCCAGCAGGGTCACGGTACTGGCCAGGGCACTGGCCTTGAGCATCAGGATCACTTCGTTGCTGTACGcc < 3:242999/149‑1 (MQ=255) gTAGAACACGCCTGCGGCGAAGAAGATTTCCACCGGCAGGTAGGTGCGGGCGATGATGGTACGGGCCATGCCGGTCAGTTCCAGCAGGGTCACGGTACTGGCCAGGGCACTGGCCTTGAGCATCAGGATCACTTCGTTGCTGTACGCCg > 7:129234/1‑149 (MQ=255) gAACACGCCTGCGGCGAAGAAGATTTCCACCGGCAGGTAGGTGCGGGCGATGATGGTACGGGCCATGCCGGTCAGTTCCAGCAGGGTCACGGTACTGGCCAGGGCACTGGCCTTGAGCATCAGGATCACTTCGTTGCTGTACGCCgg > 3:82369/1‑147 (MQ=255) gacGCCTGCGGCGAAGTAGATTTCCCCCGGCAGGTAGGTGGGGGCGATGATGGTACGGCCCTTGCCGGTCAGTTCCAGGAGGGTCACGGTACTGGCCTGGGCTCTGGCCTTGAGCTTCAGGATCACTTCGTTGCTGTTCGCCGGCAGGc < 8:73117/148‑1 (MQ=255) cacGCCTGCGGCGAAGAAGATTTCCACCGGCAGGTAGGTGCGGGCGATGATGGTACGGGCCATGCCGGTCAGTTCCAGCAGGGTCACGGTACTGGCCAGGGCACTGGCCTTGAGCATCAGGATCACTTCGTTGCTGTACGCCTGCAGGc < 6:147862/149‑1 (MQ=255) cacGCCTGCGGCGAAGAAGATTTCCACCGGCAGGTAGGTGCGGGCGATGATGGTACGGGCCATGCCGGTCAGTTCCAGCAGGGTCACGGTACTGGCCAGGGCACTAGCCTTGAGCATCAGGATCACTTCGTTGCTGTACGCCGGCAGGc > 6:96516/1‑149 (MQ=255) cTGCGGCGAAGAAGATTTCCACCGGCAGGTAGGTGCGGGCGATGATGGTACGGGCCATGCCGGTCAGTTCCAGCAGGGTCACGGTACTGGCCAGGGCACTGGCCTTGAGCATCAGGATCACTTCGTTGCTGTACGCCGGCAGGCCGATg < 1:5820/149‑1 (MQ=255) cggcgAAGAAGATTTCCACCGGCAGGTAGGTGCGGGCGATGATGGTACGGGCCATGCCGGTCAGTTCCAGCAGGGTCACGGTACTGGCCAGGGCACTGGCCTTGAGCATCAGGATCACTTCGTTGCTGTACGCCGGCAGGCCGATgcgc > 8:135995/1‑149 (MQ=255) agaagaTTTCCACCGGCAGGTAGGTGCGGGCGATGATGGTACGGGCCATGCCGGTCAGTTCCAGCAGGGTCACGGTACTGGCCAGGGCACTGGCCTTGAGCATCAGGATCACTTCGTTGCTGTACGCCGGCAGGCCGATGCGCGCAgcg > 8:225791/1‑149 (MQ=255) gaTTTCCACCGGCAGGTAGGTGCGGGCGATGATGGTACGGGCCATGCCGGTCAGTTCCAGCAGGGTCACGGTACTGGCCAGGGCACTGGCCTTGAGCATCAGGATCACTTCGTTGCTGTACGCCGGCAGGCCGATGCGCGCAGCGCGTg > 4:196412/1‑149 (MQ=255) aCCGGCAGGTAGGTGCGGGCGATGATGGTACGGGCCATGCCGGTCAGTTCCAGCAGGGTCACGGTACTGGCCAGGGCACTGGCCTTGAGCATCAGGATCACTTCGTTGCTGTACGCCGGCAGGCCGATGCGCGCAGCGCGTGgcagc < 8:206874/147‑1 (MQ=255) aCCGGCAGGTAGGTGCGGGCGATGATGGTACGGGCCATGCCGGTCAGTTCCAGCAGGGTCACGGTACTGGCCAGGGCACTGGCCTTGAGCATCAGGATCACTTCGTTGCTGTACGCCGGCAGGCCGATGCGCGCAGCGCGTGgcagc > 7:206874/1‑147 (MQ=255) gtaggtGCGGGCGATGATGGTACGGGCCATGCCGGTCAGTTCCAGCAGGGTCACGGTACTGGCCAGGGCACTGGCCTTGAGCATCAGGATCACTTCGTTGCTGTACGCCGGCAGGCCGATGCGCGCAGCGCGTGGCAGCATGATGTAg > 5:142911/1‑148 (MQ=255) taggtGCGGGCGATGATGGTACGGGCCATGCCGGTCAGTTCCAGCAGGGTCACGGTACTGGCCAGGGCACTTGCCTTGAGCTTCAGGATCACTTCGTTGCTGTACGCCGGCAGGCCGATGCGCGCAGCGCGTGGCAGCATGATGTAGaa < 5:96516/149‑1 (MQ=255) ggtGCGGGCGATGATGGTACGGGCCATGCCGGTCAGTTCCAGCAGGGTCACGGTACTGGCCAGGGCACTGGCCTTGAGCATCAGGATCACTTCGTTGCTGTACGCCGGCAGGCCGATGCGCGCAGCGCGTGGCAGCATGATGTAGAAc < 2:51666/148‑1 (MQ=255) ggCGATGATGGTACGGGCCATGCCGGTCAGTTCCAGCAGGGTCACGGTACTGGCCAGGGCACTGGCCTTGAGCATCAGGATCACTTCGTTGCTGTACGCCGGCAGGCCGATGCGCGCAGCGCGTGGCAGCATGATGTAGAACAGCGttt < 3:196412/149‑1 (MQ=255) cGATGATGGTACGGGCCATGCCGGTCAGTTCCAGCAGGGTCACGGTACTGGCCAGGGCACTGGCCTTGAGCATCAGGATCACTTCGTTGCTGTACGCCGGCAGGCCGATGCGCGCAGCGCGTGGCAGCATGATGTAGAACAGCGTTTTg < 5:17286/149‑1 (MQ=255) gatgatGGTACGGGCCATGCCGGTCAGTTCCAGCAGGGCCACGGTACTGGCCAGGGCACTGGCCTTGAGCATCAGGATCACTTCGTTGCTGTACGCCGGCAGGCCGATGCGCGCAGCGCGTGGCAGCATGATGTAGAACAGCGTTTTGc < 7:265046/149‑1 (MQ=255) atgatgGTACGGGCCATGCCGGTCAGTTCCAGCAGGGTCACGGTACTGGCCAGGGCACTGGCCTTGAGCATCAGGATCACTTCGTTGCTGTACGCCGGCAGGCCGATGCGCGCAGCGCGTGGTAGCATGATGTAGAACAGCGTTTTGcc < 8:129234/149‑1 (MQ=255) gatgGTACGGGCCATGCCGGTCAGTTCCAGCAGGGTCACGGTACTGGCCAGGGCACTGGCCTTGAGCATCAGGATCACTTCGTTGCTGTACGCCGGCAGGCCGATGCGCGCAGCGCGTGGCAGCATGATGTAGAACAGCGTTTTGCCAc > 4:189927/1‑149 (MQ=255) tACGGGCCATGCCGGTCAGTTCCAGCAGGGTCACGGTACTGGCCAGGGCAGTGGCCTTGAGCATCAGGATCACTTCGTTGCTGTACGCCGGCAGGCCGATGCGCGCAGCGCGTGGCAGCATGATGTAGAACAGCGTTTTGCCACGCGa > 7:9161/1‑148 (MQ=255) cGGGCCATGCCGGTCAGTTCCAGCAGGGTCACGGTACTGGCCAGGGCACTGGCCTTGAGCATCAGGATCACTTCGTTGCTGTACGCCGGCAGGCCGATGCGCGCAGCGCGTGGCAGCATGATGTAGAACAGCGTTTTGCCACGCGACAt < 3:189927/149‑1 (MQ=255) gCCATGCCGGTCAGTTCCAGCAGGGTCACGGTACTGGCCAGGGCACTGGCCTTGAGCATCAGGATCACTTCGTTGCTGTACGCCGGCAGGCCGATGCGCGCAGCGCGTGGCAGCATGATGTAGAACAGCGtt > 5:268319/1‑132 (MQ=255) gCCATGCCGGTCAGTTCCAGCAGGGTCACGGTACTGGCCAGGGCACTGGCCTTGAGCATCAGGATCACTTCGTTGCTGTACGCCGGCAGGCCGATGCGCGCAGCGCGTGGCAGCATGATGTAGAACAGCGtt < 6:268319/132‑1 (MQ=255) gCCATGCCGGTCAGTTCCAGCAGGGTCACGGTACTGGCCAGGGCACTGGCCTTGAGCATCAGGATCACTTCGTTGCTGTACGCCGGCAGGCCGATGCGCGCAGCGCGTGGCAGCATGATGTAGAACAGCGTTTTGCCACGCGACATGcc < 1:242140/149‑1 (MQ=255) cGGTCAGTTCCAGCAGGGTCACGGTACTGGCCAGGGCACTGGCCTTGAGCATCAGGATCACTTCGTTGCTGTACGCCGGCAGGCCGATGCGCGCAGCGCGTGGCAGCATGATGTAGAACAGCGTTTTGCCAcg > 7:173300/1‑133 (MQ=255) cGGTCAGTTCCAGCAGGGTCACGGTACTGGCCAGGGCACTGGCCTTGAGCATCAGGATCACTTCGTTGCTGTACGCCGGCAGGCCGATGCGCGCAGCGCGTGGCAGCATGATGTAGAACAGCGTTTTGCCAcg < 8:173300/133‑1 (MQ=255) aGTTCCAGCAGGGTCACGGTACTGGCCAGGGCACTGGCCTTGAGCATCAGGATCACTTCGTTGCTGTACGCCGGCAGGCCGATGCGCGCAGCGCGTGGCAGCATGATGTAGAACAGCGTTTTGCCACGCGACATGCCCAGCGCCCGTGc < 7:225791/149‑1 (MQ=255) aGTTCCAGCAGGGTCACGGTACTGGCCAGGGCACTGGCCTTGAGCATCAGGATCACTTCGTTGCTGTACGCCGGCAGGCCGATGCGCGCAGCGCGTGGCAGCATGATGTAGAACAGCGTTTTGCCACGCGACATGCCCAGCGCCCGTGc < 3:50288/149‑1 (MQ=255) gcagGGTCACGGTACTGGCCAGGGCACTGGCCTTGAGCATCAGGATCACTTCGTTGCTGTACGCCGGCAGGCCGATGCGCGCAGCGCGTGGCAGCATGATGTAGAACAGCGTTTTGCCACGCGACATGCCCAGCGCCCGTGCCGCTTCa < 5:299714/149‑1 (MQ=255) cagGGTCACGGTACTGGCCAGGGCACTGGCCTTGAGCATCAGGATCACTTCGTTGCTGTACGCCGGCAGGCCGATGCGCGCAGCGCGTGGCAGCATGATGTAGAACAGCGTTTTGCCACGCGACATGCCCAGCGCCCGTGCCGCTTCaa < 7:85745/149‑1 (MQ=255) cagGGGCACGGTACTGGCCAGGGCACTGGCCGTGAGCATCAGGATCACTTCGTTGCTGTACGCCGGCAGGCCGATGCGCGCAGCGCGTGGCAGCATGATGTAGAACAGCGTTTTGCCACGCGACATGCCCAGCGCCCGTGCCGCTTCaa < 7:146363/149‑1 (MQ=255) gTCACGGTACTGGCCAGGGCACTGGCCTTGAGCATCAGGATCACTTCGTTGCTGTACGCCGGCAGGCCGATGCGCGCAGCGCGTGGCAGCATGATGTAGAACAGCGTTTTGCCACGCGACATGCCCAGCGCCCGTGCCGCTTCa < 7:229122/144‑1 (MQ=255) gTCACGGTACTGGCCAGGGCACTGGCCTTGAGCATCAGGATCACTTCGTTGCTGTACGCCGGCAGGCCGATGCGCGCAGCGCGTGGCAGCATGATGTAGAACAGCGTTTTGCCACGCGACATGCCCAGCGCCCGTGCCGCTTCa > 8:229122/1‑144 (MQ=255) tCACGGTTCTGGCCAGGGCACTGGCCTTGATCATCAGGATCACTTCTTTGCTGTACGCCGGGAGGCCGATGCGCGCAGCGCGTGGCAGCATGATGTATAACAGCGTTTTGCCACGCGACATGCCCAGCGCCCGTGCCGCTTCAATCTCa < 8:299611/149‑1 (MQ=255) tCACGGTACTGGCCAGGGCACTGGCCTTGAGCATCAGGATCACTTCGTTGCTGTACGCCGGCAGGCCGATGCGCGCAGCGCGTGGCAGCATGATGTAGAACAGCGTTTTGTCACGCGACATGCCCAGCGCCCGTGCCGCTTCAATCTCa < 4:82369/149‑1 (MQ=255) cACGGTACTGGCCAGGGCACTGGCCTTGAGCATCAGGATCACTTCGTTGCTGTACGCCGGCAGGCCGATGCGCGCAGCGCGTGGCAGCATGATGt > 8:279340/1‑95 (MQ=255) cACGGTACTGGCCAGGGCACTGGCCTTGAGCATCAGGATCACTTCGTTGCTGTACGCCGGCAGGCCGATGCGCGCAGCGCGTGGCAGCATGATGt < 7:279340/95‑1 (MQ=255) aCGGTACTGGCCAGGGCACTGGCCTTGAGCATCAGGATCACTTCGTTGCTGTACGCCGGCAGGCCGATGCGCGCAGCGCGTGGCAGCATGATGTAGAACAGCGTTTTGCCACGCGACATGCCCAGCGCCCGTGCCGCTTCAATCTCAcc > 4:1347/1‑149 (MQ=255) cGGTACTGGCCAGGGCACTGGCCTTGAGCATCAGGATCACTTCGTTGCTGTACGCCGGCAGGCCGATGCGCGCAGCGCGTGGCAGCATGATGTAGAACAGCGTTTTGCCACGCGACATGCCCAGCGCCCGTGCCGCTTCAATCTCACCt > 5:92221/1‑149 (MQ=255) ctcaaggCCAGTGCCCTGGCCTTGAGCATCAGGATCACTTCGTTGCTGTACGCCGGCAGGCCGATGCGCGCAGCGCGTGGCAGCATGATGTAGAACAGCGTTTTGCCACGCGACATGCCCAGCGCCCGTGCCGCTTCAATCTCACCtt > 2:120586/6‑148 (MQ=255) aaggCCAGTGCCCTGGCCTTGAGCATCAGGATCACTTCGTTGCTGTACGCCGGCAGGCCGATGCGCGCAGCGCGTGGCAGCATGATGTAGAACAGCGTTTTGCCACGCGACATGCCCAGCGCCCGTGCCGCTTCAATCTCACCTTTAgg > 4:163708/3‑149 (MQ=255) aggCCAGTGCCCTGGCCTTGAGCATCAGGATCACTTCGTTGCTGTACGCCGGCAGGCCGATGCGCGCAGCGCGTGGCAGCATGATGTAGAACAGCGTTTTGCCACGCGACATGCCCAGCGCCCGTGCCGCTTCAATCTCACCTTTAggg < 1:120586/148‑1 (MQ=255) gCCAGGGCACTGGCCTTGAGCATCAGGATCACTTCGTTGCTGTACGCCGGCAGACCGATGCGCGCAGCGCGTGGCAGCATGATGTAGAACAGCGTTTTGCCACGCGACATGCCCAGCGCCCGTGCCGCTTCAATCTCACCTTTAGGGAt > 1:84188/1‑149 (MQ=255) aCTGGCCTTGAGCATCAGGATCACTTCGTTGCTGTACGCCGGCAGGCCGATGCGCGCAGCGCGTGGCAGCATGATGTAGAACAGCGTTTTGCCACGCGACATGCCCAGCGCCCGTGCCGCTTCAATCTCACCTTTAGGGATCGCCTGCa < 5:20019/149‑1 (MQ=255) | AAGCCTTGCACCAGCATGAACGAGATCACCAGGTAGAACACGCCTGCGGCGAAGAAGATTTCCACCGGCAGGTAGGTGCGGGCGATGATGGTACGGGCCATGCCGGTCAGTTCCAGCAGGGTCACGGTACTGGCCAGGGCACTGGCCTTGAGCATCAGGATCACTTCGTTGCTGTACGCCGGCAGGCCGATGCGCGCAGCGCGTGGCAGCATGATGTAGAACAGCGTTTTGCCACGCGACATGCCCAGCGCCCGTGCCGCTTCAATCTCACCTTTAGGGATCGCCTGCA > NC_002947/337928‑338216 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |