| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,873,746 | C→A | 5.6% | intergenic (‑127/+31) | aqpZ ← / ← PP_4283 | aquaporin Z/GntR family transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,873,746 | 0 | C | A | 5.6% | 224.1 / 3.2 | 71 | intergenic (‑127/+31) | aqpZ/PP_4283 | aquaporin Z/GntR family transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base C (37/30); new base A (2/2); total (39/32) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.45e-01 | |||||||||||
CCATGCGTTTACCCAGGGACATGCTCATGAATCCATTCCTCAAGAAGTTGAACGCAACGAATGCGCAAGCCCAACTGCTTGATGAAGGTTTG‑CTCACAAGAATTTAGCAGACCTTTGGGTTATGGCCAGTA‑GTGGCTGGAAGGGCTGCCTTGCAG‑CCCCTCGATCACGCAGGCAAACGA‑TCAACCCTTGACGGAAACCTTGGGTTTTTTCAACAGATGCGAGAACACGGCATGCAAATCGTCCGAGGCGCTCTCCTCGTCCAGATTCAGCTTGCTGTCGATGTGGTCCATGTGATGC > NC_002947/4873598‑4873894 | ccATGCGTTTACCCAGGGACATGCTCATGAATCCATTCCTCAAGAAGTTGAACGCAACGAATGCGCAAGCCCAACTGCTTGATGAAGGTTTG‑CTCACAAGAATTTAGCAGACCTTTGGGTTATGGCCAGTA‑GTGGCTGGAAGGGCTGcc > 2:240109/1‑149 (MQ=255)ccATGCGTTTACCCAGGGACATGCTCATGAATCCATTCCTCAAGAAGTTGAACGCAACGAATGCGCAAGCCCAACTGCTTGATGAAGGTTTG‑CTCACAAGAATTTAGCAGACCTTTGGGTTATGGCCAGTA‑GTGGCTGGAAGGGCTGcc < 3:230792/149‑1 (MQ=255) tttACCCAGGGACATGCTCATGAATCCATTCCTCAAGAAGTTGAACGCAACGAATGCGCAAGCCCAACTGCTTGATGAAGGTTTG‑CTCACAAGAATTTAGCAGACCTTTGGGTTATGGCCAGTA‑GTGGCTGGAAGGGCTGCCTTGCAG‑c > 6:158406/1‑149 (MQ=255) aCCCAGGGACATGCTCATGAATCCATTCCTCAAGAAGTTGAACGCAACGAATGCGCAAGCCCAACTGCTTGATGAAGGTTTG‑CTCACAAGAATTTAGCAGACCTTTGGGTTATGGCCAGTA‑GTGGCTGGAAGGGCTGCCTTGCAG‑ccc < 1:240109/148‑1 (MQ=255) ccAGGGACATGCTCATGAATCCATTCCTCAAGAAGTTGAACGCAACGAATGCGCAAGCCCAACTGCTTGATGAAGGTTTG‑CTCACAAGAATTTAGCAGACCTTTGGGTTATGGCCAGTA‑GTGGCTGGAAGGGCTGCAAGGCAG‑CCCTTc < 3:259260/149‑1 (MQ=255) gCTCATGAATCCATTCCTCAAGAAGTTGAACGCAACGAATGCGCAAGCCCAACTGCTTGATGAAGGTTTG‑CTCACAAGAATTTAGCAGACCTTTGGGTTATGGCCAGTA‑GTGGCTGGAAGGGCTGCCTTGCAG‑CCCCTCGATCACGCAg > 2:2382/1‑149 (MQ=255) cTCATGAATCCATTCCTCAAGAAGTTGAACGCAACGAATGCGCAAGCCCAACTGCTTGATGAAGGTTTG‑CTCACAAGAATTTAGCAGACCTTTGGGTTATGGCCAGTA‑GTGGCTGGAAGGGCTGCCTTGCAG‑CCCCTCGATCACGCAg < 4:91965/148‑1 (MQ=255) cATGAATCCATTCCTCAAGAAGTTGAACGCAACGAATGCGCAAGCCCAACTGCTTGATGAAGGTTTG‑CTCACAAGAATTTAGCAGACCTTTGGGTTATGGCCAGTA‑GTGGCTGGAAGGGCTGCAAGGCAG‑CCCTTcca < 3:178802/138‑3 (MQ=255) cATGAATCCATTCCTCAAGAAGTTGAACGCAACGAATGCGCAAGCCCAACTGCTTGATGAAGGTTTG‑CTCACAAGAATTTAGCAGACCTTTGGGTTATGGCCAGTA‑GTGGCTGGAAGGGCTGCAAGGCAG‑CCCTTcca > 4:178802/1‑136 (MQ=255) aTGAATCCATTCCTCAAGAAGTTGAACGCAACGAAAGCGCAAGCCCAACTGCTTGATGAAGGTTTG‑CTCACAACAATTTAGCAGACCTTTGGGTTATGGCCAGTA‑GTGGCTGGAAGGGCTGCCATGCAG‑CCCCTCGATCACGCAGGCa > 7:3303/1‑148 (MQ=255) gAATCCATTCCTCAAGAAGTTGAACGCAACGAATGCGCAAGCCCAACTGCTTGATGAAGGTTTG‑CTCACAAGAATTTAGCAGACCTTTGGGTTATGGCCAGTA‑GTGGCTGGAAGGGCTGCCTTGCAG‑CCCCTCGATCACGCAGGCAAAc > 1:57042/1‑149 (MQ=255) tCCATTCCTCAAGAAGTTGAACGCAACGAATGCGCAAGCCCAACTGCTTGATGAAGGTTTG‑CTCACAAGAATTTAGCAGACCTTTGGGTTATGGCCAGTACGTGGCTGGAAGGGCTGCCTTGCAG‑CCCCTCGATCACGCAGGCAAACGa < 1:76519/149‑1 (MQ=255) tCCATTCCTCAAGAAGTTGAACGCAACGAATGCGCAAGCCCAACTGCTTGATGAAGGTTTG‑CTCACAAGAATTTAGCAGACCTTTGGGTTATGGCCAGTA‑GTGGCTGGAAGGGCTGCCTTGCAG‑CCCCTCGATCACGCAGGCAAACGa > 1:128404/1‑148 (MQ=255) tCCTCAAGAAGTTGAACGCAACGAATGCGCAATCCCAACTGCTTGATGTAGGTTTG‑CTCACAAGAATTTAGCAGACCTTTGGGTTATGGCCAGTA‑GTGGCTGGAAGGGCTGCCTTGCAGCCCCCTCGATCACGCAGGCAAACGA‑TCAAc < 1:2382/149‑1 (MQ=255) tCCTCAAGAAGTTGAACGCAACGAATGCGCAAGCCCAACTGCTTGATGAAGGTTTG‑CTCACAAGAATTTAGCAGACCTTTGGGTTATGGCCAGTA‑GTGGCTGGAAGGGCTGCCTTGCAG‑CCCCTCGATCACGCAGGCAAACGA‑TCAAcc > 7:213051/1‑149 (MQ=255) ccTCAAGAAGTTGAACGCAACGAATGCGCAAGCCCAACTGCTTGATGAGGGTTTGAGTCACAAGAATTTAGCAGACCTTTGGGTTATGGCCAGTA‑GTGGCTGGAAGGGCTGCCTTGCAG‑CCCCTAGATCACGCAGGCAAACGA‑TAAAcc > 1:253094/1‑149 (MQ=255) cAAGAAGTTGAACGCAACGAATGCGCAAGCCCAACTGCTTGATGAAGGTTTG‑CTCACAAGAATTTAGCAGACCTTTGGGTTATGGCCAGTA‑GTGGCTGGAAGGGCTGCCTTGCAG‑CCCCTCGATCACGCAGGCAAACGA‑TCAACCCtt > 3:57886/1‑148 (MQ=255) aagaagTTGAACGCAACGAATGCGCAAGCCCAACTGCTTGATGAAGGTTTG‑CTCACAAGAATTTAGCAGACCTTTGGGGTATGGCCAGTA‑GTGGCTGGAAGGGCTGCCTTGCAG‑CCCCTCGATCACGCAGGCAAACGA‑TCAACCCTTGa > 8:64466/1‑149 (MQ=255) gaagTTGAACGCAACGAATGCGCAAGCCCAACTGCTTGATGAAGGTTTG‑CTCACAAGAATTTAGCAGACCTTTGGGTTATGGCCAGTA‑GTGGCTGGAAGGGCTGCCTTGCAG‑CCCCTCGATCACGCAGGCAAACGA‑TCAACCCTTGACg > 8:249996/1‑149 (MQ=255) cGCAACGAATGCGCAAGCCCAACTGCTTGATGAAGGTTTG‑CTCACAAGAATTTAGCAGACCTTTGGGTTATGGCCAGTA‑GTGGCTGGAAGGGCTGCCTTGCAG‑CCCCTCGATCACGCAGGCAAACGA‑TCAACCCTTGACGGAAACCTTg > 5:262872/1‑149 (MQ=255) aaCGAATGCGCAAGCCCAACTGCTTGATGAAGGTTTG‑CTCACAAGAATTTAGCAGACCTTTGGGTTATGGCCAGTA‑GTGGCTGGAAGGGCTGCCTTGCAG‑CCCCTCGATCACGCAGGCAAACGA‑TCAACCCTTGACGGAAACCTTGGGt > 1:20737/1‑149 (MQ=255) tGCGCAAGCCCAACTGCTTGATGAAGGTTTG‑CTCACAAGAATTTAGCAGACCTTTGGGTTATGGCCAGTA‑GTGGCTGGAAGGGCTGCCTTGCAG‑CCCCTCGATCACGCAGGCAAACGA‑TCAACCCTTGACGGAAACCTTGGGTTTTTTc < 2:325124/149‑1 (MQ=255) tGCGCAAGCCCAACTGCTTGATGAAGGTTTG‑CTCACAAGAATTTAGCAGACCTTTGGGTTATGGCCAGTA‑GTGGCTGGAAGGGCTGCCTTGCAG‑CCCCTCGATCACGCAGGCAAACGA‑TCAACCCTTGACGGAAACCTTGGGTTTTTTc < 2:57042/149‑1 (MQ=255) cgcAAGCCCAACTGCTTGATGAAGGTTTG‑CTCACAAGAATTTAGCAGACCTTTGGGTTATGGCCAGTA‑GTGGCTGGAAGGGCTGCCTTGCAG‑CCCCTCGATCACGCAGGCAAACGA‑TCAACCCTTGACGGAAACCTTGGGTTTTTTCaa > 5:320676/1‑149 (MQ=255) cgcAAGCCCAACTGCTTGATGAAGGTTTG‑CTCACAAGAATTTAGCAGACCTTTGGGTTATGGCCAGTA‑GTGGCTGGAAGGGCTGCCTTGCAG‑CCCCTCGATCACGCAGGCAAACGA‑TCAACCCTTGACGGAAACCTTGGGTTTTTTCaa < 7:35294/149‑1 (MQ=255) cgcAAGCCCAACTGCTTGATGAAGGTTTG‑CTCACAAGAATTTAGCAGACCCTTGGGTTATGGCCAGTA‑GTGGCTGGAAGGGCTGCCTTGCAG‑CCCCTCGATCACGCAGGCAAACGACTCAACCCTTGACGGAAACCTTGGGTTTTTTc < 1:33786/148‑1 (MQ=255) gcAAGCCCAACTGCTTGATGAAGGTTTG‑CTCACAAGAATTTAGCAGACCTTTGGGTTATGGCCAGTA‑GTGGCTGGAAGGGCTGCCTTGCAG‑CCCCTCGATCACGCAGGCAAACGA‑TCAACCCTTGACg > 8:100128/1‑128 (MQ=255) gcAAGCCCAACTGCTTGATGAAGGTTTG‑CTCACAAGAATTTAGCAGACCTTTGGGTTATGGCCAGTA‑GTGGCTGGAAGGGCTGCCTTGCAG‑CCCCTCGATCACGCAGGCAAACGA‑TCAACCCTTGACg < 7:100128/128‑1 (MQ=255) gcAAGCCCAACTGCTTGATGAAGGTTTG‑CTCACAAGAATTTAGCAGACCTTTGGGTTATGGCCAGTA‑GTGGCTGGAAGGGCTGCCTTGCAG‑CCCCTCGATCACGCAGGCAAACGA‑TCAACCCTTGACGGAAACCTTGGGTTTTTTCaa > 6:25898/1‑148 (MQ=255) gcAAGCCCAACTGCTTGATGAAGGTTTG‑CTCACAAGAATTTAGCAGACCTTTGGGTTATGGCCAGTA‑GTGGCTGGAAGGGCTGCCTTGCAG‑CCCCTCGATCACGCAGGCAAACGA‑TCAACCCTTGACGGAAACCTTGGGTTTTTTCaa > 3:196555/1‑148 (MQ=255) gcAAGCCCAACTGCTTGATGAAGGTTTG‑CTCACAAGAATTTAGCAGACCTTTGGGTTATGGCCAGTA‑GTGGCTGGAAGGGCTGCCTTGCAG‑CCCCTCGATCACGCAGGCAAACGA‑TCAACCCTTGACGGAAACCTTGGGTTTTTTCaa > 2:42623/1‑148 (MQ=255) gcAAGCCCAACTGCTTGATGAAGGTTTG‑CTCACAAGAATTTAGCAGACCTTTGGGTTATGGCCAGTA‑GTGGCTGGAAGGGCTGCCTTGCAG‑CCCCTCGATCACGCAGGCAAACGA‑TCAACCCTTGACGGAAACCTTGGGTTTTTTCaa > 4:103436/1‑148 (MQ=255) gcAAGCCCAACTGCTTGATGAAGGTATG‑CTCACAAGAATTTAGCAGACCTTTGGGTTATGGCCAGTA‑GTGGATCGAAGGGCTGCCTTCCAG‑CACCTAGATAACGCAGGCAAACGA‑TCAACACATGACGGAAACCTTGGGTTTTTTCaa > 5:296022/1‑148 (MQ=255) aaGCCCAACTGCTTGATGAGGGTTTG‑CTCACAAGAATTTAGCAGACCTTTGGGTTATGGCCAGTA‑GTGGCTGGAAGGGCTGCCTTGCAG‑CCCCTCGATCACGCAGGCAAACGA‑TCAACCCTTGACGGAAACCTTGGGTTTTTTCAAc < 2:253094/147‑1 (MQ=255) aGCCCAACTGCTTGATGAAGGTTTG‑CTCACAAGAATTTAGCAGACCTTTGGGTTATGGCCAGTA‑GTGGCTGGAAGGGCTGCCTTGCAG‑CCCCTCGATCACGCAGGCAAACGA‑TCAACCCTTGACGGAAACCTTGGGTTTTTTCAACAGa < 6:320676/149‑1 (MQ=255) gCCCAACTGCTTGATGAAGGTTTG‑CTCACAAGAATTTAGCAGACCTTTGGGTTATGGCCAGTA‑GTGGCTGGAAGGGCTCCCTTGCAG‑CCCCTCGATCACGCAGGCAAACGA‑TCAACCCTTGACGGAAACCTTGGGTTTTTTCAACAGAt > 8:262708/1‑149 (MQ=255) ccAACTGCTTGATGAAGGTTTG‑CTCACAAGAATTTAGCAGACCTTTGGGTTATGGCCAGTA‑GTGGCTGGAAGGGCTGCCTTGCAG‑CCCCTCGATCACGCAGGCAAACGA‑TCAACCCTTGACGGAAACCTTGGGTTTTTTCAACAGATGc > 1:119999/1‑149 (MQ=255) atcTGGTTGATGAAGGTTTG‑CTCACAAGAATTTAGGAGACCTTTGGGTTATGGCCAGTA‑GTGGCTGGAAGGGCTGCCTTGCAG‑CCCCTCGATCACGCAGGCAAACGA‑TCAACCCTTGACGGAAACCTTGGGTTTTTTCAACAGATGcta < 8:3303/147‑3 (MQ=255) aaCTGCTTGATGAAGGTTTG‑CTCACAAGAATTTAGCAGACCTTTGGGTTATGGCCAGTA‑GTGGCTGGACGGGCTGCCTTGCAG‑CCCCTCGATCACGCAGGCAAACGA‑TCAACCCTTGACGGAAACCTTGGGTTTTTTCAACAGATGCga > 1:232384/1‑149 (MQ=255) gatgaAGGTTTG‑CTCACAAGAATTTAGCAGACCTTTGGGTTATGGCCAGTA‑GTGGCTGGAAGGGCTGCCTTGCAG‑CCCCTCGATCACGCAGGCAAACGA‑TCAACCCTTGACGGAAACCTTGGGTTTTTTCAACAGATGCGAGAACACg < 7:249996/148‑1 (MQ=255) gatgaAGGTTTG‑CTCACAAGAATTTAGCAGACCTTTGGGTTATGGCCAGTA‑GTGGCTGGAAGGGCTGCCTTGCAG‑CCCCTCGATCACGCAGGCAAACGA‑TCAACCCTTGACGGAAACCTTGGGTTTTTTCAACAGATGCGAGAACACg < 2:232384/148‑1 (MQ=255) atgaAGGTTTG‑CTCACAAGAATTTAGCAGACCTTTGGGTTATTGCCAGTA‑GTGGCTGGAAGGGCTGCCTTGCAG‑CCCCTCGATCACGCAGGCAAACGA‑TCAACCCTTGACGGAAACCTTGGGTTTTTTCAACAGATGCga < 5:129938/140‑1 (MQ=255) atgaAGGTTTG‑CTCACAAGAATTTAGCAGACCTTTGGGTTATGGCCAGTA‑GTGGCTGGAAGGGCTGCCTTGCAG‑CCCCTCGATCACGCAGGCAAACGA‑TCAACCCTTGACGGAAACCTTGGGTTTTTTCAACAGATGCGAGAACACgg > 3:126387/1‑148 (MQ=255) aGGTTTG‑CTCACAAGAATTTAGCAGACCTTTGGGTTATGGCCAGTA‑GTGGCTGGAAGGGCTGCCTTGCAG‑CCCCTCGATCACGCAGGCAAACGA‑TCAACCCTTGACGGAAACCTTGGGTTTTTTCAACAGATGCGAGAACACGGCATg < 2:20737/148‑1 (MQ=255) aGGTTTG‑CTCACAAGAATTTAGCAGACCTTTGGGTTATGGCCAGTA‑GTGGCTGGAAGGGCTGCCTTGCAG‑CCCCTCGATCACGCAGGCAAACGA‑TCAACCCTTGACGGAAACCTTGGGTTTTTTCAACAGATGCGAGAACACGGCATGc < 3:103436/149‑1 (MQ=255) tttG‑CTCACAAGAATTTAGCAGACCTTTGGGTTATGGCCAGTA‑GTGGCTGGAAGGGCTGCCTTGCAG‑CCCCTCGATCACGCAGGCAAACGA‑TCAACCCTTGACGGAAACCTTGGGTTTTTTCAAc < 1:96519/125‑1 (MQ=255) tttG‑CTCACAAGAATTTAGCAGACCTTTGGGTTATGGCCAGTA‑GTGGCTGGAAGGGCTGCCTTGCAG‑CCCCTCGATCACGCAGGCAAACGA‑TCAACCCTTGACGGAAACCTTGGGTTTTTTCAAc > 2:96519/1‑125 (MQ=255) tttG‑CTCACAAGAATTTAGCAGACCTTTGGGTTATGGCCAGTA‑GTGGCTGGAAGGGCTGCCTTGCAG‑CCCCTCGATCACGCAGGCAAACGA‑TCAACCCTTGACGGAAACCTTGGGTTTTTTCAACAGATGCGAGAACACGGCATGCaaa < 1:42623/149‑1 (MQ=255) tCACAAGAATTTAGCAGACCTTTGGGTTATGGCCAGTA‑GTGGCTGGAAGGGCTGCCTTGCAG‑CCCCTCGATCACGCAGGCAAACGA‑TCAACCCTTGACGGAAACCTTGGGTTTTTTCAACAGAt < 8:82812/124‑1 (MQ=255) tCACAAGAATTTAGCAGACCTTTGGGTTATGGCCAGTA‑GTGGCTGGAAGGGCTGCCTTGCAG‑CCCCTCGATCACGCAGGCAAACGA‑TCAACCCTTGACGGAAACCTTGGGTTTTTTCAACAGATGCGAGAACACGGCATGCAAATCGTc > 5:201133/1‑149 (MQ=255) acaAGAATTTAGCAGACCTTTGGGTTATGGCCAGTA‑GTGGCTGGAAGGGCTGCCTTGCAG‑CCCCTCGATCACGCAGGCAAACGA‑TCAACCCTTGACGGAAACCTTGGGTTTTTTCAACAGATGCga < 3:94492/126‑1 (MQ=255) acaAGAATTTAGCAGACCTTTGGGTTATGGCCAGTA‑GTGGCTGGAAGGGCTGCCTTGCAG‑CCCCTCGATCACGCAGGCAAACGA‑TCAACCCTTGACGGAAACCTTGGGTTTTTTCAACAGATGCga > 4:94492/1‑126 (MQ=255) aGAATTTAGCAGACGTTTGGGTTATGGCCAGTA‑GTGGCTGGAAGGGCTGCCTTGCAG‑CCCCTAGATCACGCAGGCAAACGA‑TCACCCCTTGACGGAAACGTTGGGTTGTTTCAACAGATGCGAGAACACGGCATGCAAATCGTCCGAgg > 6:176740/1‑149 (MQ=255) gAATTTAGCAGACCTTTGGGTTATGGCCAGTA‑GTGGCTGGAAGGGCTGCCTTGCAG‑CCCCTCGATCACGCAGGCAAACGA‑TCAACCCTTGACGGAAACCTTGGGTTTTTTCAACAGATGCGAGAACACGGCATGCAAATCGTCCGAg > 5:59218/1‑147 (MQ=255) gAATTTAGCAGACCTTTGGGTTATGGCCAGTA‑GTGGCTGGAAGGGCTGCCTTGCAG‑CCCCTCGATCACGCAGGCAAACGA‑TCAACCCTTGACGGAAACCTTGGGTTTTTTCAACAGATGCGAGAACACGGCATGCAAATCGTCCGAg < 6:59218/147‑1 (MQ=255) gAATTTAGCAGACCTTTGGGTTATGGCCAGTA‑GTGGCTGGAAGGGCTGCCTTGCAG‑CCCCTCGATCACGCAGGCAAACGA‑TCAACCCTTGACGGAAACCTTGGGTTTTTTCAACAGATGCGAGAACACGGCATGCAAATCGTCCGAGgc > 2:227290/1‑149 (MQ=255) gAATTTAGCAGACCTTTGGGTTATGGCCAGTA‑GTGGCTGGAAGGGCTGCCTTGCAG‑CCCCTCGATCACGCAGGCAAACGA‑TCAACCCTTGACGGAAACCTTGGGTTTTTTCAACAGATGCGAGAACACGGCATGCAAATCGTCCGAGgc > 6:296661/1‑149 (MQ=255) tttAGCAGACCTTTGGGTTATGGCCAGTA‑GTGGCTGGAAGGGCTGCCTTGCAG‑CCCCTCGATCACGCAGGCAAACGA‑TCAACCCTTGACCGAAACCTTGGGTTTTTTCAACAGATGCGAGAACACGGCATGCAAATCGTCCGAGGCGct > 6:291749/1‑149 (MQ=255) gCAGACCTTTGGGTTATGGCCAGTA‑GTGGCTGGAAGGGCTGCCTTGCAG‑CCCCTCGATCACGCAGGCAAACGA‑TCAACCCTTGACGGAAACCTTGGGTTTTTTCAACAGATGCGAGAACACGGCATGCAAATCGTCCGAGGCGCTctcc < 4:57886/149‑1 (MQ=255) gCAGACCTTTGGGTTATGGCCAGTA‑GTGGCTGGAAGGGCTGCCTTGCAG‑CCCCTCGATCACGCAGGCAAACGA‑TCAACCCTTGACGGAAACCTTGGGTTTTTTCAACAGATGCGAGAACACGGCATGCAAATCGTCCGAGGCGCTctcc > 1:304841/1‑149 (MQ=255) cAGACCTTTGGGTTATGGGCAGTA‑GTGGCTGGATGGGCTGCCTTGCAG‑CCCCTCGATCACGCAGGCAAACGA‑TCAACCCTTGACGGAAACCTTGGGTTTTTTCAACAGATGCGAGAACACGGCATGCAAATCGTCCGAGGCGCTctcc < 4:210190/148‑1 (MQ=255) gggTTATGGCCAGTA‑GTGGCTGGAAGGGCTGCCTTGCAG‑CCCCTCGATCACGCAGGCAAACGA‑TCAACCCTTGACGGAAACCTTGGGTTTTTTCAACAGATGCGAGAACACGGCATGCAAATCGTCCGAGGCGCTCTCCTCGTCCAGa < 6:262872/148‑1 (MQ=255) gTTATGGCCAGTA‑GTGGCTGGAAGGGCTGCCTTGCAG‑CCCCTCGATCACGCAGGCAAACGA‑TCAACCCTTGACGGAAACCTTGGGTTTTTTCAACAGATGCGAGAACACGGCATGCAAATCGTCCGAGGCGCTCTCCTCGTCCAGAtt > 2:265884/1‑148 (MQ=255) ttATGGCCAGTA‑GTGGCTGGAAGGGCTGCCTTGCAG‑CCCCTCGATCACGCAGGCAAACAA‑TCAACCCTTGACGGAAACCTTGGGTTTTTTCAACAGATGCGAGAACACGGCATGCAAATCGTCCGAGGCGCTCTCCTCGTCCAGAtt > 7:144996/1‑147 (MQ=255) gCCAGTA‑GTGGCTGGAAGGGCTGCCTTGCAG‑CCCCTCGATCACGCAGGCAAACGA‑TCAACCCTTGACGGAAACCTTGGGTTTTTTCAACAGATGCGAGAACACGGCATGCAAATCGTCCGAGGCGCTCTCCTCGTCCAGATTCAGCTTg < 2:119999/149‑1 (MQ=255) gtGGCTGGAAGGGCTGCCTTGCAG‑CCCCTCGATCACGCAGGCAAACGA‑TCAACCCTTGACGGAAACCTTGGGTTTTTTCAACAGATGCGAGAACACGGCATGCAAATCGTCCGAGGCGCTCTCCTCGTCCAGATTCAGCTTGCTGTCGa < 8:213051/149‑1 (MQ=255) tGGAAGGGCTGCCTTGCAG‑CCCCTCGATCACGCAGGCAAACGA‑TCAACCCTTGACGGAAACCTTGGGTTTTTTCAACAGATGCGAGAACACGGCATGCAAATCGTCCGAGGCGCTCTCCTCGTCCAGATTCa > 2:144844/1‑132 (MQ=255) gAAGGGCTGCCTTGCAG‑CCCCTCGATCACGCAGGCAAACGA‑TCAACCCTTGACGGAAACCTTGGGTTTTTTCAACAGATGCGAGAACACGGCATGCAAATCGTCCGAGGCGCTCTCCTCGTCCAGATTCAGCTTGCTGTCGATGTGGt < 7:23765/148‑1 (MQ=255) aggggCTGCAAGGCAG‑CCCCTCGATCACGCAGGCAAACGA‑TCAACCCTTGACGGAAACCTTGGGTTTTTTCAACAGATGCGAGAACACGGCATGCAAATCGTCCGAGGCGCTCTCCTCGTCCAGATTCAGCTTGCTGTCGATGTGGTc > 2:62966/3‑148 (MQ=255) ggCTGCCTTGCAG‑CCCCTCGATCACGCAGGCAAACGA‑TCAACCCTTGACGGAAACCTTGGGTTTTTTCAACAGATGCGAGAACACGGCATGCAAATCGTCCGAGGCGCTCTCCTCGTCCAGATTCAGCTTGCTGTCGATGTGGTCCAtg < 2:304841/149‑1 (MQ=255) cTGCCCTGCAG‑CCCCTCGATCACGCAGGCAAACGA‑TCAACCCTTGACGGAAACCTTGGGTTTTTTCAACAGATGCGAGAACACGGCATGCAAATCGTCCGAGGCGCTCTCCTCGTCCAGATTCAGCTTGCTGTCGATGTGGTCCAtgtg > 7:41148/1‑149 (MQ=255) gCCTTGCAG‑CCCCTCGATCACGCAGGCAAACGA‑TCAACCCTTGACGGAAACCTTGGGTTTTTTCAACAGATGCGAGAACACGGCATGCAAATCGTCCGAGGCGctc > 6:204540/1‑106 (MQ=255) gCCTTGCAG‑CCCCTCGATCACGCAGGCAAACGA‑TCAACCCTTGACGGAAACCTTGGGTTTTTTCAACAGATGCGAGAACACGGCATGCAAATCGTCCGAGGCGctc < 5:204540/106‑1 (MQ=255) ccTTGCAG‑CCCCTCGATCACGCAGGCAAACGA‑TCAACCCTTGACGGAAACCTTGGGTTTTTTCAACAGATGCGAGAACACGGCATGCAAATCGTCCGAGGCGCTCTCCTCGTCCAGATTCAGCTTGCTGTCGATGTGGTCCATGTGATg > 5:85969/1‑149 (MQ=255) cTTGGAG‑CCCGTCGATAACGCAGGCAAACGA‑TCTACGCTTGACGGAATCCTTGGGTTTTTTCAACAGATGCGAGAACACGGCATGCAAATCGTCCGAGGCGCTCTCCTCGTCGAGATTCATCTTGCTGTCGATGTGGTCCATGTGATGc < 6:296022/149‑1 (MQ=255) cTTGCAT‑CCCCTCGATCACGCAGGCAAACGA‑TCAACCCTTGACGGAAACCTTGGGTTTTTTCAACAGATGCGAGAACACGGCATGCAAATCGTCCGAGGCGCTCTCCTCGTCCAGATTCAGCTTGCTGTCGATGTGGTCCATGTGATGc < 5:158406/149‑1 (MQ=255) cTTGCAG‑CCCCTCGATCACGCAGGCAAACGA‑TCAACCCTTGACGGAAACCTTGGGTTTTTTCAACAGATGCGAGAACACGGCATGCAAATCGTCCGAGGCGCTCTCCTCGTCCAGATTCAGCTTGCTGTCGATGTGGTCCATGTGATGc < 7:262708/149‑1 (MQ=255) | CCATGCGTTTACCCAGGGACATGCTCATGAATCCATTCCTCAAGAAGTTGAACGCAACGAATGCGCAAGCCCAACTGCTTGATGAAGGTTTG‑CTCACAAGAATTTAGCAGACCTTTGGGTTATGGCCAGTA‑GTGGCTGGAAGGGCTGCCTTGCAG‑CCCCTCGATCACGCAGGCAAACGA‑TCAACCCTTGACGGAAACCTTGGGTTTTTTCAACAGATGCGAGAACACGGCATGCAAATCGTCCGAGGCGCTCTCCTCGTCCAGATTCAGCTTGCTGTCGATGTGGTCCATGTGATGC > NC_002947/4873598‑4873894 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |