| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,900,069 | G→A | 6.7% | intergenic (+30/‑468) | PP_4308 → / → PP_4309 | AsnC family transcriptional regulator/NCS1 family transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,900,069 | 0 | G | A | 6.7% | 211.9 / 3.6 | 74 | intergenic (+30/‑468) | PP_4308/PP_4309 | AsnC family transcriptional regulator/NCS1 family transporter |
| Reads supporting (aligned to +/- strand): ref base G (37/32); new base A (2/3); total (39/35) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.62e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.09e-02 | |||||||||||
TGTGCGCTCGATGGAGCAGCTGGACACCCTGCTCGACCTCATGAATGTGCTGGCCGAGACCAATACCGCGATCATCAAGAAGACCCCGGTCAAGCGGCGGTTGCCGCCAATGGATTGA‑TTG‑GCTCCTGTGCTGGCCTCTTCGCAGGCGTGCCCGCGAAGAGGCCAGTACAGGAAAAGCTGAGTATTTTTTGTACACAAAAACGTAACCATAGGTGCCATTTTTGTGTGCACTTTCTTCAGTGGCGCCCCAATTCGTTACACACTTTCCACCCTCTATTTTGACCAAATGATCAA > NC_002947/4899922‑4900215 | tgtgCGCTCGATGGAGCAGCTGGACACCCTGCTCGACCTCATGAATGTGCTGGCCGAGACCAATACCGCGATCATCAAGAAGACCCCGGTCAAGCGGCGGTTGCCGCCAATGGATTGA‑TTG‑GCTCCTGTGCTGGCCTCTTCGCAGGCGt > 7:253822/1‑149 (MQ=255) tgCGCTCGATGGAGCAGCTGGACACCCTGCTCGACCTCATGAATGTGCTGGCCGAGACGAATACCGCGATCATCAAGAAGACCCCGGTCAAGCGGCGGTTGCCGCCAATGGATTGA‑TTG‑GCTCCTGTGCTGGCCTCTTCGCAGGCGTGc > 5:251031/1‑149 (MQ=255) tgCGCTCGATGGAGCAGCTGGACACCCTGCTCGACCTCATGAATGTGCTGGCCGAGACCAATACCGCGATCATCAAGAAGACCCCGGTCAAGCGGCGGTTGCCGCCAATGGATTGA‑TTG‑GCTCCTGTGCTGGCCTCTTCGCAGGCGTGc > 2:283233/1‑149 (MQ=255) tgCGCTCGATGGAGCAGCTGGACACCCTGCTCGACCTCATGAATGTGCTGGCCGAGACCAATACCGCGATCATCAAGAAGACCCCGGTCAAGCGGCGGTTGCCGCCAATGGATTGA‑TTG‑GCTCCTGTGCTGGCCTCTTCGCAGGCGTGc < 8:144062/149‑1 (MQ=255) cgcTCGATGGAGCAGCTGGACACCCTGCTCGACCTCATGAATGTGCTGGCCGAGACCAATACCGCGATCATCAAGAAGACCCCGGTCAAGCGGCGGTTGCCGCCAATGGATTGA‑TTG‑GCTCCTGTACTGGCCTCTTCGCAGGCGTGccc > 2:225116/1‑149 (MQ=255) cGATGGAGCAGCTGGACACCCTGCTCGACCTCATGAATGTGCTGGCCGAGACCAATACCGCGATCATCAAGAAGACCCCGGTCAAGCGGCGGTTGCCGCCAATGGATTGA‑TTG‑GCTCCTGTGCTGGCCTCTTCGCAGGCGTGCCcgcg > 7:163539/1‑148 (MQ=255) tGGAGCAGCTGGACACCCTGCTCGACCTCATGAATGTGCTGGCCGAGACCAATACCGCGATCATCAAGAAGACCCCGGTCAAGCGGCGGTTGCCGCCAATGGATTGA‑TTG‑GCTCCTGTACTGGCCTCTTCGCGGGCACGCCTGCGAaga < 7:202560/149‑1 (MQ=39) tGGAGCAGCTGGACACCCTGCTCGACCTCATGAATGTGCTGGCCGAGACCAATACCGCGATCATCAAGAAGACCCCGGTCAAGCGGCGGTTGCCGCCAATGGATTGA‑TTG‑GCTCCTGTACTGGCCTCTTCGCAGGCGTGCCCGCGAaga < 1:225116/149‑1 (MQ=255) gAGCAGCTGGACACCCTGCTCGACCTCATGAATGTGCTGGCCGAGACCAATACCGCGATCATCAAGAAGACCCCGGTCAAGCGGCGGTTGCCGCCAATGGATTGA‑TTG‑GCTCCTGTACTGGCCTCTTCGCGGGCACGCCTGCGAagag < 6:223651/148‑1 (MQ=39) cagcTGGACACCCTGCTCGACCTCATGAATGTGCTGGCCGAGACCAATACCGCTATCATCAAGAAGACCCCGGTCAAGCGGCGGTTGCCGCCAATGGATTGA‑TTG‑GCTCCTGTGCTGGCCTCTTCGCAGGCGGGCCCGCGAAGAGGCCa < 8:201431/149‑1 (MQ=255) agcTGGACACCCTGCTCGACCTCATGAATGTGCTGGCCGAGACCAATACCGCGATCATCAAGAAGACCCCGGTCAAGCGGCGGTTGCCGCCAATGGATTGA‑TTG‑GCTCCTGTGCTGGCCTCTTCGCAGGCGTGCCCGCGAAGAGGCCAg > 6:297625/1‑149 (MQ=255) tGGACACCCTGCTCGACCTCATGAATGTGATGGCCGAGACCAATACCGCGATCATCAAGAAGACCCCGGTCAAGCGGCGGTTGCCGCCAATGGATTGA‑TTG‑GCTCCTGTGCTGGCCTCTTCGCAGGCGTGCCCGCGAAGAGGCCAGTa > 1:49455/1‑148 (MQ=255) gACACCCTGCTCGACCTCATGAATGTGCTGGCCGAGACCAATACCGCGATCATCAAGAAGACCCCGGTCAAGCGGCGGTTGCCGCCAATGGATTGA‑TTG‑GCTCCTGTGCTGGCCTCTTCGCAGGCGTGCCCGCGAAGAGGCCAGTACa < 5:297625/148‑1 (MQ=255) gACACCCTGCTCGACCTCATGAATGTGCTGGCCGAGACCAATACCGCGATCATCAAGAAGACCCCGGTCAAGCGGCGGTTGCCGCCAATGGATTGA‑TTG‑GCTCCTGTGCTGGCCTCTTCGCAGGCGTGCCCGCGAAGAGGCCAGTACAg > 3:92395/1‑149 (MQ=255) acacCCTGCTCGACCTCATGAATGTGCTGGCCGAGACCAATACCGCGATCATCAAGAAGACCCCGGTCAAGCGGCGGTTGCCGCCAATGGATTGA‑TTG‑GCTCCTGTGCTGGCCTCTTCGCAGGCGTGCCCGCGAAGAGGCCAGTACAg > 1:304357/1‑148 (MQ=255) ccTGCTCGACCTCATGAATGTGCTGGCCGAGACCAATACCGCGATCATCAAGAAGACCCCGGTCAAGCGGCGGTTGCCGCCAATGGATTGA‑TTG‑GCTCCTGTGCTGGCCTCTTCGCAGGCGTGCCCGCGAAGAGGCCAGTACAGGaa > 3:9425/1‑147 (MQ=255) ccTGCTCGACCTCATGAATGTGCTGGCCGAGACCAATACCGCGATCATCAAGAAGACCCCGGTCAAGCGGCGGTTGCCGCCAATGGATTGA‑TTG‑GCTCCTGTGCTGGCCTCTTCGCAGGCGTGCCCGCGAAGAGGCCAGTACAGGaa > 3:236125/1‑147 (MQ=255) ccTGCTAGACCTCATGAATGTGCTGGCCGAGACCAATACCGCGATCAGCAAGAAGACACCGGTCAAGCGGCGGTTGCCGCCAATGGAATGA‑TTG‑GCTCCTGTGCTGGCATCTTCGCAGGCGTGCCCGCGAAGAGGCGAGTACAGGcaaa > 6:21697/1‑149 (MQ=255) cTCGACCTCATGAATGTGCTGGCCGAGACCAATACCGCGATCATCAAGAAGACCCCGGTCAAGCGGCGGTTGCCGCCAATGGATTGA‑TTG‑GCTCCTGTACTGGCCTCTTCGCGGGCACGCCTGCGAAGAGGCCAGCACAGGagccaa < 8:63287/147‑6 (MQ=37) tCGACCTCATGAATGTGCTGGCCGAGACCAATACCGCGATCATCAAGAAGACCCCGGTCAAGCGGCGGTTGCCGCCAATGGATTGA‑TTG‑GCTCCTGTGCTGGCCTCTTCGCAGGCGTGCCCGCGAaga > 7:85496/1‑128 (MQ=255) tCGACCTCATGAATGTGCTGGCCGAGACCAATACCGCGATCATCAAGAAGACCCCGGTCAAGCGGCGGTTGCCGCCAATGGATTGA‑TTG‑GCTCCTGTGCTGGCCTCTTCGCAGGCGTGCCCGCGAaga < 8:85496/128‑1 (MQ=255) gACCTCATGAATGTGCTGGCCGAGACCAATACCGCGATCATCAAGAAGACCCCGGTCAAGCGGCGGTTGCCGCCAATGGATTGA‑TTGTTCTCCTGTGCTGGCCTCTTCGCAGGCGTGCCCGCGAAGAGGCCAGTACAGGAAAAGCTg < 1:92967/147‑1 (MQ=255) aaTGTGCTGGCCGAGACCAATACCGCGATCATCAAGAAGACCCCGGTCAAGCGGCGGTTGCCGCCAATGGATTGA‑TTG‑GCTCCTGTGCTGGCCTCTTCGCAGGCGTGCCCGCGAAGAGGCCAGTACAGGAAAAGCTGAGTATTTTTTGt < 2:151691/149‑1 (MQ=255) aTGTGCTGGCCGAGACCAATACCGCGATCATCAAGAAGACCCCGGTCAAGCGGCGGTTGCCGCCAATGGATTGA‑TTG‑GCTCCTGTGCTGGCCTCTTCGCAGGCGTGCCCGCGAAGAGGCCAGTACAGGAAAAGCTGAGTATTTTTTGTa < 1:283233/149‑1 (MQ=255) cTGGCCGAGACCAATACCGCGATCATCAAGAAGACCCCGGTCAAGCGGCGGTTGCCGCCAATGGATTGA‑TTG‑GCTCCTGTGCTGGCCTCTTCGCAGGTGTGCCCGCGAAGAGGCCAGTACAGGAAAAGCTGa < 1:281754/132‑1 (MQ=255) cTGGCCGAGACCAATACCGCGATCATCAAGAAGACCCCGGTCAAGCGGCGGTTGCCGCCAATGGATTGA‑TTG‑GCTCCTGTGCTGGCCTCTTCGAAGGTGTGCCCGCGAAGAGGCCAGTACAGGAAAAGCTGa > 2:281754/1‑132 (MQ=255) gCCGAGACCAATACCGCGATCATCAAGAAGACCCCGGTCAAGCGGCGGTTGCCGCCAATGGATTGA‑TTG‑GCTCCTGTGCTGGCCTCTTCGCAGGCGTGCCCGCGAAGAGGCCAGTACAGGAAAAGCTGAGTATTTTTTGTACACaaaaa < 6:125390/149‑1 (MQ=255) gCCGAGACCAATACCGCGATCATCAAGAAGACCCCGGTCAAGCGGCGGTTGCCGCCAATGGATTGA‑TTG‑GCTCCTGTGCTGGCCTCTTCGCACGCGTGCCCGCGAAGAGGCCAGTACAGGAAAAGCTGAGTATTTTTTGTACACaaaa > 6:8359/1‑148 (MQ=255) ccGAGACCAATACCGCGATCATCAAGAAGACCCCGGTCAAGCGGCGGTTGCCGCCAATGGATTGAGTTG‑GCTCCTGTGCTGGCCTCTTCGCAGGCGTGCCCGCGAAGAGGCCAGTACAGGAAAAGCTGAGTATTTTTTGTACACaaaaa > 1:97836/1‑149 (MQ=255) ccGAGACCAATACCGCGATCATCAAGAAGACCCCGGTCAAGCGGCGGTTGCCGCCAATGGATTGA‑TTG‑GCTCCTGTGCTGGCCTCTTCGCAGGCGTGCCCGCGAAGAGGCCAGTACAGGAAAAGCTGAGTATTTTTTGTACACAAAAAc > 1:262790/1‑149 (MQ=255) gaCCAATACCGCGATCCTCACGAAGACCCCGGTCAACCCGCGGTTGCCGCCAATGGATTGA‑TTG‑GCTCCTGTGCTGGCCTCTTCGCAGGCGTGCCCGCGAAGAGGCCAGTACAGGAAAAGCTGAGTATTTTTTGTACACAAAAACGTaa < 6:256761/149‑1 (MQ=255) aTACCGCGATCATCAAGAAGACCCCGGTCAAGCGGCGGTTGCCGCCAATGGATTGA‑TTG‑GCTCCTGTGCTGGCCTCTTCGCAGGCGTGCCCGCGAAGAGGCCAGTACAGGAAAAGCTGAGTATTTTTTGTACACAAAAACGTAACCa > 2:214890/1‑147 (MQ=255) tACCGCGATCATCAAGAAGACCCCGGTCAAGCGGCGGTTGCCGCCAATGGATTGA‑TTG‑GCTCCTGTGCTGGCCTCTTCGCAGGCGTGCCCGCGAAGAGGCCAGTACAGGAAAAGCTGAGTATTTTTTGTACACAAAAACGTAACCATAg < 4:9425/149‑1 (MQ=255) ccGCGATCATCAAGAAGACCGCGGTCAAGCGGCGGTTGCCGCCAATGGATTGA‑TTG‑GCTCCTGTGCTGGCCTCTTCGCAGGCGTGCCCGCGAAGAGGCCAGTACAGGAAAAGCTGAGTATTTTTTGTACACAAAAACGTAACCATAGGt < 4:236125/149‑1 (MQ=255) cgcgATCATCAAGAAGACCCCGGTCAAGCGGCGGTTGCCGCCAATGGATTGA‑TTG‑GCTCCTGTGCTGGCCTCTTCGCAGGCGTGCCCGCGAAGAGGCCAGTACAGGAAAAGCTGAGTATTTTTTGTacac < 7:180877/130‑1 (MQ=255) cgcgATCATCAAGAAGACCCCGGTCAAGCGGCGGTTGCCGCCAATGGATTGA‑TTG‑GCTCCTGTGCTGGCCTCTTCGCAGGCGTGCCCGCGAAGAGGCCAGTACAGGAAAAGCTGAGTATTTTTTGTacac > 8:180877/1‑130 (MQ=255) cgcgATCATCAAGAAGACCCCGGTCAAGCGGCGGTTGCCGCCAATGGATTGA‑TTG‑GCTCCTGTGCTGGCCTCTTCGCAGGCGTGCCCGCGAAGAGGCCAGTACAGGAAAAGCTGAGTATTTTTTGTACACAAAAACGTAACCATAGGTg > 8:176528/1‑149 (MQ=255) tcaAGAAGACCCCGGTCAAGCGGCGGTTGGCGCCAATGGATTGA‑TTG‑GCTCCTGTGCTGGCCTCTTCGCAGGCGTGCCCGCGAAGAGGCCAGTACAGGAAAAGCTGAGTATTTTTTGTACACAAAAACGTAACCATAGGTGCCAttttt < 2:49455/149‑1 (MQ=255) tcaAGAAGACCCCGGTCAAGCGGCGGTTGCCGCCAATGGATTGA‑TTG‑GCTCCTGTGCTGGCCTCTTCGCAGGCGTGCCCGCGAAGAGGCCAGTACAGGAAAAGCTGAGTATTTTTTGTa < 5:330968/119‑1 (MQ=255) tcaAGAAGACCCCGGTCAAGCGGCGGTTGCCGCCAATGGATTGA‑TTG‑GCTCCTGTGCTGGCCTCTTCGCAGGCGTGCCCGCGAAGAGGCCAGTACAGGAAAAGCTGAGTATTTTTTGTa > 6:330968/1‑119 (MQ=255) gaagaCCCCGGTCAAGCGGCGGTTGCCGCCAATGGATTGA‑TTG‑GCTCCTGTGCTGGCCTCTTCGCAGGCGTGCCCGCGAAGAGGCCAGTACAGGAAAAGCTGAGTATTTTTTGTACACAAAAACGTAACCATAGGTGCCATTTTtgtgt < 2:304357/149‑1 (MQ=255) gaagaCCCCGGTCAAGCGGCGGTTGCCGCCAATGGATTGA‑TTG‑GCTCCTGTGCTGGCCTCTTCGCAGGCGTGCCCGCGAAGAGGCCACTACAGGAAAACCTGAGTATTTTTTGTACACAAAAACGTAAACAAAGGTGCCAtattagag > 8:18683/1‑144 (MQ=255) gccgccAATGGATTGA‑TTG‑GCTCCTGTGCTGGCCTCTTCGCAGGCGTGCCCGCGAAGAGGCCAGTACAGGAAAAGCTGAGTATTTTTTGTACACAAAAACGTAACCATAGGTGCCATTTTTGTGTGCACTTTCTTCAGTGGCGCCCCa > 8:293159/1‑148 (MQ=255) ccgccAATGGATTGA‑TTG‑GCTCCTGTGCTGGCCTCTTCGCAGGCGTGCCCGCGAAGAGGCCAGTACAGGAAAAGCTGAGTATTTTTTGTACACAAAAACGTAACCATAGGTGCCATTTTTGTGTGCACTTTCTTCAGTGGCGCCCCaa < 7:293159/148‑1 (MQ=255) cAATGGATTGA‑TTG‑GCTCCTGTGCTGGCCTCTTCGCAGGCGTGCCCGCGAAGAGGCCAGTACAGGAAAAGCTGAGTATTTTTTGTACACAAAAACGTAACCATAGGTGCCATTTTTGTGTGCACTTTCTTCAGTGGCGCCCCAATTCGt < 8:253822/149‑1 (MQ=255) aaTGGATTGA‑TTG‑GCTCCTGTGCTGGCCTCTTCGCAGGCGTGCCCTCGAAGAGGCCAGTACAGGAAAAGCTGAGTATTTTTTGTACACAAAAACGTAACCATATGTGCCATTTTTGTGTGCACTTTCTTCAGTGGCGCCCCAATTCGtt < 5:8359/149‑1 (MQ=255) aaTGGATTGA‑TTG‑GCTCCTGTGCTGGCCTCTTCGCAGGCGTGCCCGCGAAGAGGCCAGTACAGGAAAAGCTGAGTATTTTTTGTACACAAAAACGTAACCATAGGTGCCATTTTTGTGTGCACTTTCTTCAGTGGCGCCCCAATTCGtt < 1:214890/149‑1 (MQ=255) aTGGATTGA‑TTG‑GCTCCTGTGCTGGCCTCTTCGCAGGCGTGCCCGCGAAGAGGCCAGTACAGGAAAAGCTGAGTATTTTTTGTACACAAAAACGTAACCATAGGTGCCATTTTTGTGTGCACTTTCTTCAGTGGCGCCCCAATTCGTTa < 3:44708/149‑1 (MQ=255) aTGGATTGA‑TTG‑GCTCCTGTGCTGGCCTCTTCGCAGGCGTGCCCGCGAAGAGGCCAGTACAGGAAAAGCTGAGTATTTTTTGTACACAAAAACGTAACCATAGGTGCCATTTTTGTGTGCACTTTCTTCAGTGGCGCCCCAATTCGTTa < 7:176528/149‑1 (MQ=255) tGGATTGT‑TTG‑GCTCCTGTGCTTGCCTCTTCGCTGGCGTGCCCGCGAAGAGGCCAGTACAGGAAAAGCTGAGTATTTTTTGTACACAAAAACGTAACCATAGGTGCCTTTTTTGTGTGCACTTTCTTCAGTGGCGCCCCAATTCGTTa < 2:262790/148‑1 (MQ=255) gattga‑ttG‑GCTCCTGTGCTGGCCTCTTCGCAGGCGTGCCCGCGAAGAGGCCAGTACAGGAAAAGCTGAGTATTTTTTGTACACAAAAACGTAACCATAGGTGCCATTTTTGTGTGCACTTTCTTCAGTGGCGCCCCAATTCGTTaca > 4:287933/1‑148 (MQ=255) ttga‑ttg‑GCTCCTGTGCTGGCCTCTTCGCAGGCGTGCCCGCGAAGAGGCCAGTACAGGAAAAGCTGAGTATTTTTTGTACACAAAAACGTAACCATAGGTGCCATTTTTGTGTGCACTTTCTTCAGTGGCGCCCCAATTCGTTacacac > 6:76174/1‑149 (MQ=255) cagctag‑gCTCCTGTGCTGGCCTCTTCGCAGGCGTGCCCGCGAAGAGGCCAGTACAGGAAAAGCTGAGTATTTTTTGTACACAAAAACGTAACCATAGGTGCCATTTTTGTGTGCACTTTCTTCAGTGGCGCCCCAATTCGTTa < 6:21811/138‑1 (MQ=255) ttg‑GCTCCTGTGCTGGCCTCTTCGCAGGCGTGCCCGCGAAGAGGCCAGTACAGGAAAAGCTGAGTATTTTTTGTACACAAAAACGTAACCATAGGTGCCATTTTTGTGTGCACTTTCTTCAGTGGCGCCCCAATTCGTTACACACTTTc > 1:33478/1‑149 (MQ=255) tCCTGTGCTGGCCTCTTCGCAGGCGTGCCCGCGAAGAGGCCAGTACAGGAAAAGCTGAGTATTTTTTGTACACAAAAACGTAACCATAGGTGCCATTTTTGTGTGCACTTTCTTCAGTGGCGCCCCAATTCGTTACACACTTTCCAccc > 6:318768/1‑149 (MQ=255) cTGTGCTGGCCTCTTCGCAGGCGTGCCCGCGAAGAGGCCAGTACAGGAAAAGCTGAGTATTTTTTGTACACAAAAACGTAACCATAGGTGCCATTTTTGTGTGCACTTTCTTCAGTGGCGCCCCAATTCGTTACACACTTTCCACCctc < 4:92395/149‑1 (MQ=255) cTGGCCTCTTCGCAGGCGTGCCCGCGAAGAGGCCAGTACAGGAAAAGCTGAGTATTTTTTGTACACAAAAACGTAACCATAGGTGCCATTTTTGTGTGCACTTTCTTCAGTGGCGCCCCAATTCGTTACACACTTTCCACCCTCTAtt < 2:33478/148‑1 (MQ=255) cTGGCCTCTTCGCAGGCGTGCCAGCGAAGAGGCCAGTACAGGAAAAGCTGAGTATTTTTTGTACACAAAAACGTAACCATAGGTGCCAATTTTGTGTGCACTTTCTTCAGTGGCGCCCCAATTAGTTACACACTTTCCACCCTCTAttt > 8:24228/1‑149 (MQ=255) tGGCCTCTTCGCGGGCACGCCTGCGAAGAGGCCAGTACAGGAAAAGCTGAGTATTTTTTGTACACAAAAACGTAACCATAGGTGCCATTTTTGTGTGCACTTTCTTCAGTGGCGCCCCAATTCGTTACACACTTTCCACCCTCTAtttt > 2:209993/1‑149 (MQ=255) gCCTCTTCGCAGGCGTGCCCGCGAAGAGGCCAGTACAGGAAAAGCTGAGTATTTTTTGTACACAAAAACGTAACCATAGGTGCCATTTTTGTGTGCACTTTCTTCAGTGGCGCCCCAATTCGTTACACACTTTCCACCCTCTATTTTGa > 6:197757/1‑149 (MQ=255) ccTCTTCGCAGGCGTGCCCGCGAAGAGGCCAGTACAGGAAAAGCTGAGTATTTTTTGTACACAAAAACGTAACCATAGGTGCCATTTTTGTGTGCACTTTCTTCAGTGGCGCCCCAATTCGTTACACACTTTCCACCCTCTATTTTGAc < 5:76174/149‑1 (MQ=255) ctctTCGCAGGCGTGCCCGCGAAGAGGCCAGTACAGGAAAAGCTGAGTATTTTTTGTACACAAAAACGTAACCATAGGTGCCATTTTTGTGTGCACTTTCTTCAGTGGCGCCCCAATTCGTTACACACTTTCCACCCTCTATTTTGAc > 7:38881/1‑148 (MQ=255) tctTCGCGGGCACGCCTGCGAAGAGGCCAGTACAGGAAAAGCTGAGTATTTATTGTACACAAAAACGTAACCATAGGTGCCATTTTTGTGTGCACTTTCTTCAGTGGCGCCCCAATTCGTTACACAATTTCCAGCCTCTATTTTGAcc > 4:178634/1‑148 (MQ=255) tctTCGCAGGCGTGCCCGCGAAGAGGCCAGTACAGGAAAAGCTGAGTATTTTTTGTACACAAAAACGTAACCATAGGTGCCATTTTTGTGTGCACTTTCTTCAGTGGCGCCCCAATTCGtt < 6:326627/121‑1 (MQ=255) tctTCGCAGGCGTGCCCGCGAAGAGGCCAGTACAGGAAAAGCTGAGTATTTTTTGTACACAAAAACGTAACCATAGGTGCCATTTTTGTGTGCACTTTCTTCAGTGGCGCCCCAATTCGtt > 5:326627/1‑121 (MQ=255) tctTCGCAGGCGTGCCCGCGAAGAGGCCAGTACAGGAAAAGCTGAGTATTTTTTGTACACAAAAACGTAACCATAGGTGCCATTTTTGTGTGCACTTTCTTCAGTGGCGCCCCAATTCGTTACACACTTTCCACCCTCTATTTTGAcc > 3:299217/1‑148 (MQ=255) cGCAGGCGTGCCCGCGAAGAGGCCAGTACAGGAAAAGCTGAGTATTTTTTGTACACAAAAACGTAACCATAGGTGCCATTTTTGTGTGAACTTTCTTCAGTGGCGCCCCAATTCGTTACACACTTTCCACCCTCTATTTTGACCAAAt > 6:117451/1‑148 (MQ=255) gCAGGCGTGCCCGCGAAGAGGCCAGTACAGGAAAAGCTGAGTATTTTTTGTACACAAAAACGTAACCATAGGTGCCATTTTTGTGTGCACTTTCTTCAGTGGCGCCCCAATTCGTTACACACTTTCCACCCTCTATTTTGACCAAATGa < 3:287933/149‑1 (MQ=255) gCAGGCGTGCCCGCGAAGAGGCCAGTACAGGAAAAGCTGAGTATTTTTTGTACACAAAAACGTAACCATAGGTGCCATTTTTGTGTGCACTTTCTTCAGTGGCGCCCCAATTCGTTACACACTTTCCACCCTCTATTTTGACCAAATGa > 8:281236/1‑149 (MQ=255) cAGGCGTGCCCGCGAAGAGGCCAGTACAGGAAAAGCTGAGTATTTTTTGTACACAAAAACGTAACCATAGGTGCCATTTTTGTGTGCACTTTCTTCAGTGGCGCCCCAATTCGTTACACACTTTCCACCCTCTATTTTGACCAAATGAt > 8:173617/1‑149 (MQ=255) cAGGCGTGCCCGCGAAGAGGCCAGTACAGGAAAAGCTGAGTATTTTTTGTACACAAAAACGTAACCATAGGTGCCATTTTTGTGTGCACTTTCTTCAGTGGCGCCCCAATTCGTTACACACTTTCCACCCTCTATTTTGACCAAATGAt < 5:117451/149‑1 (MQ=255) aGGCGTGCCCGCGAAGAGGCCAGTACAGGAAAAGCTGAGTATTTTTTGTACACAAAAACGTAACCATAGGTGCCATTTTTGTGTGCACTTTCTTCAGTGGCGCCCCAATTCGTTACACACTTTCCACCCTCTATTTTGACCAAATGAt > 1:312001/1‑148 (MQ=255) gCGTGCCCGCGAAGAGGCCAGTACAGGAAAAGCTGAGTATTTTTTGTACACAAAAACGTAACCATAGGTGCCATTTTTGTGTGCACTTTCTTCAGTTGCGCCCCAATTCGTTACACACTTTCCACCCTCTATTTTGACCAAATGATCaa < 4:311456/149‑1 (MQ=255) gCGTGCCCGCGAAGAGGCCAGTACAGGAAAAGCTGAGTATTTTTTGTACACAAAAACGTAACCATAGGTGCCATTTTTGTGTGCACTTTCTTCAGTGGCGCCCCAATTCGTTACACACTTTCCACCCTCTATTTTGACCAAATGATCa > 3:107048/1‑148 (MQ=255) | TGTGCGCTCGATGGAGCAGCTGGACACCCTGCTCGACCTCATGAATGTGCTGGCCGAGACCAATACCGCGATCATCAAGAAGACCCCGGTCAAGCGGCGGTTGCCGCCAATGGATTGA‑TTG‑GCTCCTGTGCTGGCCTCTTCGCAGGCGTGCCCGCGAAGAGGCCAGTACAGGAAAAGCTGAGTATTTTTTGTACACAAAAACGTAACCATAGGTGCCATTTTTGTGTGCACTTTCTTCAGTGGCGCCCCAATTCGTTACACACTTTCCACCCTCTATTTTGACCAAATGATCAA > NC_002947/4899922‑4900215 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |