Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_002947	367,362	C→A	7.7%	intergenic (‑48/+26)	PP_5442 ← / ← PP_0306	hypothetical protein/hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_002947	367,362	0	C	A	7.7%	180.3 / 2.0	59	intergenic (‑48/+26)	PP_5442/PP_0306	hypothetical protein/hypothetical protein
Reads supporting (aligned to +/- strand):  ref base C (32/22);  new base A (3/2);  total (35/24)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.64e-01

CATAGCTGCAAATCTTCCCATGTATCGAGTGTCAGCCAGGGCGCAGGCTTGATGCTTAGCCGCTCCTCGAATATTCGGGTGTCCAGGCTCG‑TATCGTCCATGTGGCATTGCTCCTTGATGGATGCAGATGACCAGAACCGGGTACCAGCGCGCTCTGGTACCCGGCCTCGCTAATCAGATAGCGAGAAACGCGCCGAGGTCGCCTTTGATCTTCTCATTCACAAGGTCACGTGCAGCGTCGAAGTGACGAACGCTGAACGTGCCTTGTTGCGAAGCGCGATAGACGCGGGTAGAG  >  NC_002947/367214‑367508                                                                                                                                                      |                                                                                                                                                   cATAGCTGCAAATCTTCCCATGTATCGAGTGTCAGCCAGGGCGCAGGCTTGATGCTTAGCCGCTCCTCGAATATTCGGGTGTCCAGGCTCG‑TATCGTCCATGTGGCATTGCTCCTTGATGGATGCAGATGACCAGAACCGGGTACCAgc                                                                                                                                                    <  6:183607/149‑1 (MQ=255)      cTGCAAATCTTCCCATGTATCGAGTGTCAGCCAGGGCGCAGGCTTGATGCTTAGCCGCTCCTCGAATATTCGGGTGTCCAGGCTCG‑TATCGTCCATGTGGCATTGCTCCTTGATGGATGCAGATGACCAGAACCGGGTACCAGCGCGct                                                                                                                                               >  5:82931/1‑149 (MQ=255)      cTGCAAATCTTCCCATGTATCGAGTGTCAGCCAGGGCGCAGGCTTGATGCTTAGCCGCTCCTCGAATATTCGGGTGTCCAGGCTCG‑TATCGTCCATGTGGCATTGCTCCTTGATGGATGCAGATGACCAGAACCGGGTACCAGCGCGct                                                                                                                                               <  2:27362/149‑1 (MQ=255)       tGCAAATCTTCCCATGTATCGAGTGTCAGCCAGGGCGCAGGCTTCATGCTTACCCGCTCCTCGAATATTCGGGTGTCCACGCTCG‑TATCGTCCATGTGCCATTGCTCCTTGATGGATGCAGATGCCCAGAACCCGGTACAAGCGctcta                                                                                                                                              >  7:132280/1‑148 (MQ=255)         cAAATCTTCCCATGTATCGAGTGTCAGCCAGGGCGCAGGCTTGATGCTTAGCCGCTCCTCGAATATTCGGGTGTCCAGGCTCG‑TATCGTCCATGTGGCATTGCTCCTTGATGGATGCAGATGACCAGAACCGGGTACCAGCGCGCTCTg                                                                                                                                            <  4:156692/149‑1 (MQ=255)                 cccATGTATCGAGTGTCAGCCAGGGCGCAGGCTTGATGCTTAGCCGCTCCTCGAATCTTCGGGTGTCCAGGCTCG‑TATCGTCCATGTGGCATTGCTCCTTGATGGATGCAGATGACCAGAACCGGGTACCAGCGCGCTCTGGTAc                                                                                                                                        <  4:9246/145‑1 (MQ=255)                 cccATGTATCGAGTGTCAGCCAGGGCGCAGGCTTGATGCTTAGCCGCTCCTCGAATATTCGGGTGTCCAGGCTCG‑TATCGTCCATGTGGCATTGCTCCTTGATGGATGCAGATGACCAGAACCGGGTACCAGCGCGCTCTGGTACCCgg                                                                                                                                    >  5:302335/1‑149 (MQ=255)                 cccATGTATCGAGTGTCAGCCAGGGCGCAGGCTTGATGCTTAGCCGCTCCTCGAATATTCGGGTGTCCAGGCTCG‑TATCGTCCATGTGGCATTGCTCCTTGATGGATGCAGATGACCAGAACCGGGTACCAGAGCGCGCTGGTAc                                                                                                                                        <  1:295570/145‑1 (MQ=255)                   cATGTATCGAGTGTCAGCCAGGGCGCAGGCTTGATGCTTAGCCGCTCCTCGAATATTCGGGTGTCCAGGCTCG‑TATCGTCCATGTGGCATTGCTCCTTGATGGATGCAGATGACCAGAACCGGGTACCAGCGCGCTCTGGTACCCGGc                                                                                                                                   >  3:228540/1‑148 (MQ=255)                    aTGTATCGAGTGTCAGCCAGGGCGCAGGCTTGATGCTTAGCCGCTCCTCGAATATTCGGGTGTCCAGGCTCG‑TATCGTCCATGTGGCATTGCTCCTTGATGGATGCAGATGACCAGAACCGGGTACCAGCGCGCTCTGGTACCCGGCCt                                                                                                                                 >  5:2505/1‑149 (MQ=255)                         tCGAGTGTCAGCCAGGGCGCAGGCTTGATGCTTAGCCGCTCCTCGAATATTCGGGTGTCCAGGCTCG‑TATCGTCCATGTGGCATTGCTCCTTGATGGATGCAGATGACCAGAACCGGGTACCAGCGCGCTCTGGTAccc                                                                                                                                      >  8:211258/1‑139 (MQ=255)                         tCGAGTGTCAGCCAGGGCGCAGGCTTGATGCTTAGCCGCTCCTCGAATATTCGGGTGTCCAGGCTCG‑TATCGTCCATGTGGCATTGCTCCTTGATGGATGCAGATGACCAGAACCGGGTACCAGCGCGCTCTGGTAccc                                                                                                                                      <  7:211258/139‑1 (MQ=255)                         tCGAGTGTCAGCCAGGGCGCAGGCTTGATGCTTAGCCGCTCCTCGAATATTCGGGTGTCCAGGCTCG‑TATCGTCCATGTGGCATTGCTCCTTGATGGATGCAGATGACCAGAACCGGGTACCAGCGCGCTCTGGTACCCGGCCTCGCt                                                                                                                             >  6:75856/1‑148 (MQ=255)                           gAGTGTCAGCCAGGGCGCAGGCTTGATGCTTAGCCGCTCCTCGAATATTCGGGTGTCCAGGCTCG‑TATCGTCCATGTGGCATTGCTCCTTGATGGATGCAGATGACCAGAACCGGGTACCAGCGCGCTCTGGTACCCGGCCTCGCTaa                                                                                                                           >  8:257069/1‑148 (MQ=255)                             gtgtCAGCCAGGGCGCAGGCTTGATGCTTAGCCGCTCCTCGAATATTCGGGTGTCCAGGCTCG‑TATCGTCCATGTGGCATTGCTCCTTGATGGATGCAGATGACCAGAACCGGGTACCAGCGCGCTCTGGTACCCGGCCTCGCTAATCa                                                                                                                        <  6:2505/149‑1 (MQ=255)                              tgtCAGCCAGGGCGCAGGCTTGATGCTTAGCCGCTCCTCGAATATTCGTGTGTCCAGGCTAG‑TATCGTCCATTTGGCATTGCTCCTTGATTGATTCAGACTACCAGAACCGGCTAACAGCGAGCTCTTGTACACTGCCTCTCTAAt                                                                                                                          >  4:90248/1‑146 (MQ=255)                                     cAGGGCGCAGGCTTGATGCTTAGCCGCTCCTCGAATATTCGGGTGTCCAGGCTCG‑TATCGTCCATGTGGCATTGCTCCTTGATGGATGCAGATGACCAGAACCGGGTACCAGCGCGCTCTGGTACCCGGCCTCGCTAATCAGATAGCga                                                                                                                <  6:82931/149‑1 (MQ=255)                                       gtgcgcAGGCTTGATGCTTAGCCGCTCCTCGAATATTCGGGTGGCCATGCTCG‑TATCGTCCATGTGGCATTGCTCCTTGATGGATGCAGATGACCAGAACCGGGTACCAGCGCGCTCTGGTACCCGGCCTCGCTAATCAGATAGCgaga                                                                                                              <  8:248310/147‑1 (MQ=255)                                               gCTTGATGCTTAGCCGCTCCTCGAATATTCGGGTGTCCAGGCTCG‑TATCGTCCATGTGGCATTGCTCCTTGATGGATGCAGATGACCAGAACCGGGTACCAGCGCGCTCTGGTACCCGGCCTCGCTAATCAGAAAGCGACAAACGcccc                                                                                                      >  2:185906/1‑149 (MQ=255)                                                   gATGCTTAGCCGCTCCTCGAATATTCGGGTGTCCAGGCTCG‑TATCGTCCATGTGGCATTGCTCCTTGATGGATGCAGATGACCAGAACCGGGTACCAGCGCGCTCTGGTACCCGGCCTCGCTAATCATATAGCGAGAAAACCGCCGAgg                                                                                                  >  8:141013/1‑149 (MQ=255)                                                            ccGCTCCTCGAATATTCGGGTGTCCAGGCTCG‑TATCGTCCATGTGGCATTGCTCCTTGATGGATGCAGATGACCAGAACCGGGTACCAGCGCGCTCTGGTACCCGGCCTCGCTAATCAGATAGCGAGAAACGCGCCGAGGTCGCCTTTg                                                                                         <  7:141013/149‑1 (MQ=255)                                                              gCTCCTCGAATATTCGGGTGTCCAGGCTCG‑TATCGTCCATGTGGCATTGCTCCTTGATGGATGCAGATGACCAGAACCGGGTACCAGCGCGCTCTGGTACCCGGCCTCGCTAATCAGATAGCGAGAAACGCGCCGAGGTCGCCTTTGa                                                                                        >  4:27545/1‑148 (MQ=255)                                                                tcctcGAATATTCGGGTGTCCAGGCTCG‑TATCGTCCATGTGGCATTGCTCCTTGATGGATGCAGATGACCAGAACCGGGTACCAGCGCGCTCTGGTACCCGGCCTCGCTAATCAGATAGCGAGAAACGCGCCGAGGTCGCCTTTGAtct                                                                                     >  5:98406/1‑149 (MQ=255)                                                                  ctcGAATATTCGGGTGTCCAGGCTCGTTATCGTCCATGTGGCATTGCTCCTTGATGGATGCAGATGACCAGAACCGGGTACCAGCGCGCTCTGGTACCCGGCCTCGCTAATCAGATAGCGAGAAACGCGCCGAGGTCGCCTTTGAtctt                                                                                    >  1:14995/1‑149 (MQ=255)                                                                  ctcGAATATTCGGGTGTCCAGGCTCG‑TATCGTCCATGTGGCATTGCTCCTTGATGGATGCAGATGACCAGAACCGGGTACCAGCGCGCTCTGGTACCCGGCCTCGCTAATCAGATAGCGAGAAACGCGCCGAGGTCGCCTTTGAtcttc                                                                                   <  6:302335/149‑1 (MQ=255)                                                                  ctcGAATATTCGGGTGTCCAGGCTCG‑TATCGTCCATGTGGCATTGCTCCTTGATGGATGCAGATGACCAGAACCGGGTACCAGCGCGCTCTGGTACCCGGCCTCGCTAATCAGATAGCGAGAAACGCGCCGAGGTCGCCTTTGAtcttc                                                                                   <  3:27545/149‑1 (MQ=255)                                                                     gAATATTCGGGTGTCCAGGCTCG‑TATCGTCCATGTGGCATTGCTCCTTGATGGATGCAGATGACCAGAACCGGGTACCAGCGCGCTCTGGTACCCGGCCTCGCTAATCAGATAGCGAGAAACGCGCCGAGGTCGCCTTTGATCTTCTCa                                                                                >  8:52775/1‑149 (MQ=255)                                                                          ttCGGGTGTCCAGGCTCG‑TATCGTCCATGTGGCATTGCTCCTTGATGGATGCAGATGACCAGAACCGGGTACCAGCGCGCTCTGGTACCCGGCCTCGCTAATCAGATAGCGAGAAACGCGCCGAGGTCGCCTTTGATCTTCTCATTca                                                                            <  3:143062/148‑1 (MQ=255)                                                                             gggTGTCCAGGCTCG‑TATCGTCCATGTGGCATTGCTCCTTGATGGATGCAGATGACCAGAACCGGGTACCAGCGCGCTCTGGTACCCGGCCTCGCTAATCAGATAGCGAGAAACGCGCCGAGGTCGCCTTTGATCTTCTCATTCACaa                                                                         <  7:257069/148‑1 (MQ=255)                                                                               gtgtCCAGGCTCG‑TATCGTCCATGTGGCATTGCTCCTTGATGGATGCAGATGACCAGAACCGGGTACCAGCGCGCTCTGGTACCCGGCCTCGCTAATCAGATAGCGAGAAACGCGCCGAGGTCGCCTTTGATCTTCTCATTCACAAGGt                                                                      >  6:301548/1‑149 (MQ=255)                                                                                     aGGCTCG‑TATCGTCCATGTGGCATTGCTCCTTGATGGATGCAGATGACCAGAACCGGGTACCAGCGCGCTCTGGTACCCGGCCTCGCTAATCAGATAGCGAGAAACGCGCCGAGGTCGCCTTTGATCTTCTCATTCACAAGGTCACGTg                                                                <  2:14995/149‑1 (MQ=255)                                                                                       gCTCT‑TATCGTCCATGTGGCATTGCTCATTGATGGATTCAGATGACCAGAACCGGGTACCAGCGCGCTCTGGTACCCGGCCTCGCTAATCAGATAGCGAGATACGCGCCGAGGTCGCCTTTGATCTTCTCATTCACAAGGTCACGTGCa                                                              <  8:132280/149‑1 (MQ=255)                                                                                               tCGTCCATGTGGCATTGCTCCTTGATGGATGCAGACGACCAGAACCGGGTACCAGAGCGCGCTGGTACCCGGCCTCGCTAATCAGATAGCGAGAAACGCGCCGAGGTCGCCTTTGATCTTCTCATTCACAAGGTCACGTGCAGCGTCg                                                        <  3:90248/148‑1 (MQ=255)                                                                                                  tCCATGTGGCATTGCTCCTTGATGGATGCAGATGACCAGAACCGGCTACCAGCGCGCTCTGGTACCCGGCCTCGCTAATCAGATAGCGAGAAACGCGCCGAGGTCGCCTTTGATCTTCTCATTCACAAGGTCACGTGCAGCGTAGAAGt                                                    >  4:175048/1‑149 (MQ=255)                                                                                                    cATGTGGCATTGCTCCTTGATGGATGCAGATGACCAGAACCGGGTACCAGCGCGCTCTGGTACCCGGCCTCGCTAATCAGATAGCGAGAAACGCGCCGAGGTCGCCTTTGATCTTCTCATTCACAAGGTCACGTGCAGCGTCGAAGTGa                                                  >  8:141554/1‑149 (MQ=255)                                                                                                        tgGCATTGCTCCTTGATGGATGCAGATGACCAGAACCGGGTACCAGCGCGCTCTGGTACCCGGCCTCGCTAATCAGATAGCGAGAAACGCGCCGAGGTCGCCTTTGATCTTCTCATTCACAAGGTCACGTGCAGCGTCGAAGTGACGaa                                              >  4:203240/1‑149 (MQ=255)                                                                                                        tgGCATTGCTCCTTGATGGATGCAGATGACCAGAACCGGGTACCAGCGCGCTCTGGTACCCGGCCTCGCTAATCAGATAGCGAGAAACGCGCCGAGGTCGCCTTTGATCTTCTCATTCACAAGGTCACGTGCAGCGTCGAAGTGACGaa                                              >  5:221263/1‑149 (MQ=255)                                                                                                          gCATTGCTCCTTGATGGATGCAGATGACCAGAACCGGGTACCAGCGCGCTCTGGTACCCGGCCTCGCTAATCAGATAGCGAGAAACGCGCCGAGGTCGCCTTTGATCTTCTCATTCACAAGGTCACGTGCAGCGTCGAAGTGACGAACg                                            <  1:185906/149‑1 (MQ=255)                                                                                                            aTTGCTCCTTGATGGATGCAGATGACCAGAACCGGGTACCAGCGCGCTCTGGTACCCGGCCTCGCTAATCAGATAGCGAGAAACGCGCCGAGGTCGCCTTTGATCTTCTCATTCACAAGGTCACGTGCAGCGTCGAAGTGACGAACGCt                                          >  3:309859/1‑149 (MQ=255)                                                                                                                 tCCTTGATGGATGCAGATGACCAGAACCGGGTACCAGCGCGCTCTGGTACCCGGCCTCGCTAATCAGATAGCGAGAAACGCGCCGAGGTCGCCTTTGATCTTCTCATTCACAAGGTCACGTGCAGCGTCGAAGTGACGAACGCTGAACg                                     >  7:31719/1‑149 (MQ=255)                                                                                                                  ccTTGATGGATGCAGATGACCAGAACCGGGTACCAGCGCGCTCTGGTACCCGGCCTCGCTAATCAGATAGCGAGAAACGCGCCGAGGTCGCCTTTGATCTTCTCATTCACAAGGTCACGTGCAGCGTCGAAGTGACGAACGCTGAACGt                                    >  7:97374/1‑149 (MQ=255)                                                                                                                   cTTGATGGATGCAGATGACCAGAACCGGGTACCAGCGCGCTCTGGTACCCGGCCTCGCTAATCAGATAGCGAGAAACGCGCCGAGGTCGCCTTTGATCTTCTCATTCACAAGGTCACGTGCAGCGTCGAAGTGACGAACGCTGAACGt                                    <  5:75856/148‑1 (MQ=255)                                                                                                                   cTTGATGGATGCAGATGACCAGAACCGGGTACCAGCGCGCTCTGGTACCCGGCCTCGCTAATCAGATAGCGAGAAACGCGCCGAGGTCGCCTTTGATCTTCTCATTCACAAGGTCACGTGCAGCGTCGAAGTGACGAACGCTGAACGTg                                   >  1:287322/1‑149 (MQ=255)                                                                                                                   cTTGATGGATGCAGATGACCAGAACCGGGTACCAGCGCGCTCTGGTACCCGGCCTCGCTAATCAGATAGCGAGAAACGCGCCGAGGTCGCCTTTGATCTTCTCATTCACAAGGTCACGTGCAGCGTCGAAGTGACGAACGCTGAACGTg                                   >  2:291041/1‑149 (MQ=255)                                                                                                                     tGATGGATGCAGATGACCAGAACCGGGTACCAGCGCGCTCTGGTACCCGGCCTCGCTAATCAGATAGCGAGAAACGCGCCGAGGTCGCCTTTGATCTTCTCATTCACAAGGTCACGTGCAGCGTCGAAGTGACGAACGCTGAACGTGcc                                 >  4:40528/1‑149 (MQ=255)                                                                                                                          gatgCAGATGACCAGAACCGGGTACCAGCGCGCTCTGGTACCCGGCCTCGCTAATCAGATAGCGAGAAACGCGCCGAGGTCGCCTTTGATCTTCTCATTCACAAGGTCACGTGCAGCGTCGAAGTGACGAACGCTGAACGTGCCttgtt                            <  8:31719/149‑1 (MQ=255)                                                                                                                             gCAGATGACCAGAACCGGGTACCAGCGCGCTCTGGTACCCGGCCTCGCTAATCAGATAGCGAGAAACGCGCCGAGGTCGCCTTTGATCTTCTCATTCACAAGGTCACGTGCAGCGTCGAAGTGACGAACGCTGAACGTGCCTTGTTGCg                         >  2:124697/1‑149 (MQ=255)                                                                                                                               aGATGACCAGAACCGGGTACCAGCGCGCTCTGGTACCCGGCCTCGCTAATCAGATAGCGAGAAACGCGCCGAGGTCGCCTTTGATCTTCTCATTCACAAGGTCACGTGCAGCGTCGAAGTGACGAACGCTGAACGTGCCTTGTTGCg                         >  5:28134/1‑147 (MQ=255)                                                                                                                                  tGACCAGAACCGGGTACCAGCGCGCTCTGGTACCCGGCCTCGCTAATCAGATAGCGAGAAACGCGCCGAGGTCGCCTTTGATCTTCTCATTCACAAGGTCACGTGCAGCGTCGAAGTGACGAACGCTGAACGTGCCTTGTTGCGAAgcg                    <  1:291041/149‑1 (MQ=255)                                                                                                                                  tGACCAGAACCGGGTACCAGCGCGCTCTGGTACCCGGCCTCGCTAATCAGATAGCGAGAAACGCGCCGAGGTCGCCTTTGATCTTCTCATTCACAAGGTCACGTGCAGCGTCGAAGTGACGAACGCTGAACGTGCCTTGTTGCGAAgcg                    <  7:52775/149‑1 (MQ=255)                                                                                                                                   gACCAGAACCGGGTACCAGCGCGCTCTGGTACCCGGCCTCGCTAATCAGATAGCGAGAAACGCGCCGAGGTCGCCTTTGATCTTCTCATTCACAAGGTCACGTGCAGCGTCGAAGTGACGAACGCTGAACGTGCCTTGTTGCGAAgcgc                   >  2:90049/1‑149 (MQ=255)                                                                                                                                      cAGAACCGGGTACCAGCGCGCTCTGGTACCCGGCCTCGCTAATCAGATAGCGAGAAACGCGCCGAGGTCGCCTTTGATCTTCTCATTCACAAGGTCACGTGCAGCGTCGAAGTGACGAACGCTGAACGTGCCTTGTTGCGGAGCGCGAt                <  1:124697/149‑1 (MQ=255)                                                                                                                                        aggccGGGTACCAGAGCGCGCTGGTACCCGGTCTCGCTAATCAGATAGCGAGAAACGCGCCGAGGTCGCCTTTGATCTTCTCATTCACAAGGTCACGTGCAGCGTCGAAGTGACGAACGCTGAACGTGCCTTGTTGCGAAGCGCGa                 >  6:106853/4‑146 (MQ=255)                                                                                                                                           ccGGGTACCAGAGCGCGCTGGTACCCGGCCTCGCTAATCAGATAGCGAGAAACGCGCCGAGGTCGCCTTTGATCTTCTCATTCACAAGGTCACGTGCAGCGTCGAAGTGACGAACGCTGAACGTGCCTTGTTGCGAAGCGCGATAGAcg           >  5:148512/1‑149 (MQ=255)                                                                                                                                            cGGGTACCAGCGCGCTCTGGTACCCGGCCTCGCTAATCAGATAGCGAGAAACGCGCCGAGGTCGCCTTTGATCTTCTCATTCACAAGGTCACGTGCAGCGTCGAAGTGACGAACGCTGAACGTGCCTTGTTGCGAAGCGCGATAGAc            >  8:250432/1‑147 (MQ=255)                                                                                                                                            cGGGTACCAGAGCGCGCTGGTACCCGGCCTCGCTAATCAGATAGCGAGAAACGCGCCGAGGTCGCCTTTGATCTTCTCATTCACAAGGTCACGTGCAGCGTCGAAGTGACGAACGCTGAACGTGCCTTGTTGCGAAGCGCGATAGAcgc          >  7:205749/1‑149 (MQ=255)                                                                                                                                              ggTACCAGCGCGCGCTGCTACCCGGCCTCCCTAATCAGATAGCGAGAAACGCGCCGAGGTCGCCTTTGATCTTCTCATTCACAAGGTCACGTGCAGCGTCGAAGTGACGAACGCTGAACGTGCCTTGTTGCGAAGCGCGATAGACGCgg        <  8:246774/149‑1 (MQ=255)                                                                                                                                                   cAGCGCGCTCTGGTACCCGGCCTCGCTAATCAGATAGCGTGAAACGCGCCGAGGTCGCCTTTGATCTTCTCATTCACAAGGTCACGTGCAGCGTCGAAGTGACGAACGCTGAACGTGCCTTGTTGCGAAGCGCGATAGACGCGGGTa     >  6:279738/1‑147 (MQ=255)                                                                                                                                                   cAGCGCGCTCTGGTACCCGGCCTCGCTAAACAGATAGCGAGAAACGCGCCGAGGTCCCCATAGATCTTCTCATTCACAAGGTCACGTGCAGCGTCGAAGTGACGAACGCTGAACGTGCCTTGATGCGAAGCGCGATAGACGCGGGTa     >  1:190476/1‑147 (MQ=255)                                                                                                                                                    aGCCCGCTCTGGTACCCGGCCTCGCTAATCAGATAGCGAGAAACGCGCCGAGGGCGCCTTTGATCTTCTCATTCACAAGGTCACGTGCAGCGTCGAAGTGACGAACGCTGAACGTGCCTTGTTGCGAAGCGCGATAGACGCGGGTagag  <  4:46049/149‑1 (MQ=255)                                                                                                                                                      |                                                                                                                                                   CATAGCTGCAAATCTTCCCATGTATCGAGTGTCAGCCAGGGCGCAGGCTTGATGCTTAGCCGCTCCTCGAATATTCGGGTGTCCAGGCTCG‑TATCGTCCATGTGGCATTGCTCCTTGATGGATGCAGATGACCAGAACCGGGTACCAGCGCGCTCTGGTACCCGGCCTCGCTAATCAGATAGCGAGAAACGCGCCGAGGTCGCCTTTGATCTTCTCATTCACAAGGTCACGTGCAGCGTCGAAGTGACGAACGCTGAACGTGCCTTGTTGCGAAGCGCGATAGACGCGGGTAGAG  >  NC_002947/367214‑367508

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑