| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,945,616 | C→G | 5.8% | R322P (CGG→CCG) | flhB ← | flagellin export apparatus substrate specificity protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,945,616 | 0 | C | G | 5.8% | 222.5 / 3.3 | 69 | R322P (CGG→CCG) | flhB | flagellin export apparatus substrate specificity protein |
| Reads supporting (aligned to +/- strand): ref base C (32/33); new base G (2/2); total (34/35) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.93e-01 | |||||||||||
GCAGGTCGTCCTTCAGTGGCTCTGGGCGCTTGCCCTTGCCGGCGCGGTATTGGCGAATCTGGAACACATACGCCAGCACCTGCGCCACCGCCAGGTACAGCCCCGCCGGGATCTCCTGCTCAAG‑TTCGGTGGAGTAATAGATCGCCCGCGCCAGCGCCGGCGATTCGAGGATCTGGATGTTGTGCTCCACGCCAATTTCACGAATCTTCAACGCCATGAAATCGCTACCCTTGGCCAGCAGCAACGGCGCCGCACCGCCTTTCTCCGGGTCGTATTGCAAAGCCACCGCATAATG > NC_002947/4945470‑4945764 | gCAGGTCGTCCTTCAGTGGCTCTGGGCGCTTGCCCTTGCCGGCGCGGTATTGGCGAATCTGGAACACATACGCCAGCACCTGCGCCACCGCCAGGTACAGCCCCGCCGGGATCTCCTGCTCAAG‑TTCGGTGGAGTAATAGATCGCCcgc > 7:122941/1‑149 (MQ=255) aGGTCGTCCTTCAGTGGCTCTGGGCGCTTGCCCTTGCCGGCGCGGTATTGGCGAATCTGGAACACATACGCCAGCACCTGCGCCACCGCCAGGTACAGCCCCGCCGGGATCTCCTGCTCAAG‑TTCGGTGGAGTAATAGATCGCCCgcgc < 8:290669/149‑1 (MQ=255) gtcgtcCTTCAGTGGCTCTGGGCGCTTGCCCTTGCCGGCGCGGTATTGGCGAATCTGGAACACATACGCCAGCACCTGCGCCACCGCCAGGTACAGCCCCGCCGGGATCTCCTGCTCAAG‑TTCGGTGGAGTAATAGATCGCCCGCGCCa < 3:173649/149‑1 (MQ=255) tcCTTCAGTGGCTCTGGGCGCTTGCCCTTGCCGGCGCGGTATTGGCGAATCTGGAACACATACGCCAGCACCTGCGCCACCGCCAGGTACAGCCCCGCCGGGATCTCCTGCTCAAG‑TTCGGTCGAGTAATAGATCGCCGGCGCTCgcgc > 8:189580/1‑149 (MQ=255) ttCAGTGGCTCTGGGCGCTTGCCCTTGCCGGCGCGGTATTGGCGAATCTGGAACACATACGCCAGCACCTGCGCCACCGCCAGGTACAGCCCCGCCGGGATCTCCTGCTCAAG‑TTCGGTGGAGTAATAGATCGCCCGCGCCAGCGCCgg > 4:113800/1‑149 (MQ=255) ttCAGTGGCTCTGGGCGCTTGCCCTTGCCGGCGCGGTATTGGCGAATCTGGAACACATACGCCAGCACCTGCGCCACCGCCAGGTACAGCCCCGCCGGGATCTCCTGCTCAAG‑TTCGGTGGAGTAATAGATCGCCCGCGCCAGCGCCgg > 6:245705/1‑149 (MQ=255) tCAGTGGCTCTGGGCGCTTGCCCTTGCCGGCGCGGTATTGGCGAATCTGGAACACATACGCCAGCACCTGCGCCACCGCCAGGTACAGCCCCGCCGGGATCTCCTGCTCAAG‑TTCGGTGGAGTAATAGATCGCCCGCGCCAGCGCCGGc > 5:180321/1‑149 (MQ=255) aGTGGCTCTGGGCGCTTGCCCTTGCCGGCGCGGTATTGGCGAATCTGGAACACATACGCCAGCACCTGCGCCACCGCCAGGTACAGCCCCGCCGGGATCTCCTGCTCAAG‑TTCGGTGGAGTAATAGATCGCCCGCGCCAGCGCCGGCGa < 8:122941/149‑1 (MQ=255) tGGCTCTGGGCGCTTGCCCTTGCCGGCGCGGTATTGGCGAATCTGGAACACTTACGCCAGCACCTGCGCCACCGCCAGGTACAGCCCCGCCGGGATCTCCTGCTCAAG‑TTCGGTCGAGTAATAGATCGCCGGCGCTTGCGCGGGCGAtc < 7:189580/149‑2 (MQ=255) gCTCTGGGCGCTTGCCCTTGCCGGCGCGGTATTGGCGAATCTGGAACACATACGCCAGCACCTGCGCCACCGCCAGGTACAGCCCCGCCGGGATCTCCTGCTCAAG‑TTCGGTGGAGTAATAGATCGCCCGCGCCAGCGCCGGCGATTc > 4:304108/1‑148 (MQ=255) tGGGCGCTTGCCCTTGCCGGCGCGGTATTGGCGAATCTGGAACACATACGCCAGCACCTGCGCCACCGCCAGGTACAGCCCCGCCGGGATCTCCTGCTCAAG‑TTCGGTGGAGTAATAGATCGCCCGCGCCAGCGCCGGCGATTCGAGGa > 8:172794/1‑149 (MQ=255) ggCGCTTGCCCTTGCCGGCGCGGTATTGGCGAATCTGGAACACATACGCCAGCACCTGCGCCACCGCCAGGTACAGCCCCGCCGGGATCTCCTGCTCAAGATTCGGTGGAGTAATAAATCGCCGGCGCTGGCGCGGGCGAtctattac < 1:71234/148‑8 (MQ=255) ggCGCTTGCCCTTGCCGGCGCGGTATTGGCGAATCTGGAACACATACGCCAGCACCTGCGCCACCGCCAGGTACAGCCCCGCCGGGATCTCCTGCTCAAG‑TTCGGTGGAGTAATAGATCGCCCGCGCCAGCGCCGGCGATTCGAGGATc > 6:120620/1‑149 (MQ=255) cgcTTGCCCTTGCCGGCGCGGTATTGGCGAATCTGGAACACATACGCCAGCACCTGCGCCACCGCCAGGTACAGCCCCGCCGGGATCTCCTGCTCAAG‑TTCGGTGGAGTAATAGATCGCCCGCGCCAGCGCCGGCGATTCGAGGATCTg < 3:209328/149‑1 (MQ=255) gcccttgccGGCGCGGTATTGGCGAATCTGGAACACATACGCCAGCACCTGCGCCACCGCCAGGTACAGCCCCGCCGGGATCTCCTGCTCAAG‑TTCGGTGGAGTAATAGATCGCCCGCGCCAGCGCCGGCGATTCGAGGATCTGGAtg < 3:252987/148‑1 (MQ=255) gcccttgccGGCGCGGTATTGGCGAATCTGGAACACATACGCCAGCACCTGCGCCACCGCCAGGTACAGCCCCGCCGGGATCTCCTGCTCAAG‑TTCGGTGGAGTAATAGATCGCCCGCGCCAGCGCCGGCGATTCGAGGATCTGGAt < 3:29089/147‑1 (MQ=255) gcccttgccGGCGCGGTATTGGCGAATCTGGAACACATACGCCAGCACCTGCGCCACCGCCAGGTACAGCCCCGCCGGGATCTCCTGCTCAAG‑TGCGATGGAGTAATAGATCGCCCGCGCCAGCGCCGACGATTCGAGGAGAGGGAtgt > 8:66213/1‑149 (MQ=255) cccttgccGGCGCGGTATTGGCGAATCTGGAACACATACGCCAGCACCTGCGCCACCGCCAGGTACAGCCCCGCCGGTATCTCCTGCTCAAG‑TTCGGTGGAGTAATAGATCGCCCGCGCCAGCGCCGGCGATTCGAGGATCTGGAtgtt < 4:118714/149‑1 (MQ=255) cccttgacGGCGCGGTATTGGCGAATCTGGAACACATACGCCAGCACCTGCGCCACCGCCAGGTACAGCCCCGCCGGGATCTCCTGCTCAAG‑TTCGGTGGAGTAATAGATCGCCCGCGCCAGCGCCGGCGATTCGAGGATCTGGAtgtt < 3:306393/149‑1 (MQ=255) ccttgccGGCGCGGTATTGGCGAATCTGGAACACATACGCCAGCACCTGCGCCACCGCCAGGTACAGCCCCGCCGGGATCTCCTGCTCAAG‑TTCGGTGGAGTATTAGATCGCCCGCGCCGGCGCCGGCGATGCGGGGAGCTGCAtgttg > 7:167166/1‑149 (MQ=255) cGGCGCGGTATTGGCGAATCTGGAACACATACGCCAGCACCTGCGCCACCGCCAGGTACAGCCCCGCCGGGATCTCCTGCTCAAG‑TTCGGTGGAGTAATAGATCGCCCGCGCCAGCGCCGGCGATTCGAGGATCTGGATGTTGTGCTc > 5:54403/1‑148 (MQ=255) gTATTGGCGAATCTGGAACACATACGCCAGCACCTGCGCCACCGCCAGGTACAGCCCCGCCGGGATCTCCTGCTCAAG‑TTCGGTGGAGTAATAGATCGCCCGCGCCAGCGCCGGCGATTCGAGGATCTGGATGTTGTGCTCCACGCCaa > 4:127085/1‑149 (MQ=255) gCGAATCTGGAACACATACGCCAGCACCTGCGCCACCGCCAGGTACAGCCCCGCCGGGATCTCCTGCTCAAG‑TTCGGTGGAGTAATAGATCGCCCGCGCCAGCGCCGGCGATTCGAGGATCTGGATGTTGTGCTCCACGCCAATTTCAc < 6:54403/149‑1 (MQ=255) gCGAATCTGGAACACATACGCCAGCACCTGCGCCACCGCCAGGTACAGCCCCGCCGGGATCTCCTGCTCAAG‑TTCGGTGGAGTAATAGATCGCCCGCGCCAGCGCCGGCGATTCGAGGATCTGGATGTTGTGCTCCACGCCAATTTCAc < 3:304108/149‑1 (MQ=255) cGAATCTGGAACACATACGCCAGCACCTGCGCCACCGCCAGGTACAGCCCCGCCGGGATCTCCTGCTCAAG‑TTCGGTGGAGTAATAGATCGCCCGCGCCAGCGCCGGCGATTCGAGGATCTGGATGTTGTGCTCCACGCCAATTTCACg < 2:193248/149‑1 (MQ=255) gAATCTGGAACACATACGCCAGCACCTGCGCCACCGCCAGGTACAGCCCCGCCGGGATCTCCTGCTCAAG‑TTCGGTGGAGTAATAGATCGCCCGCGCCAGCGCCGGCGATTCGAGGATCTGGATGTTGTGCTCCACGCCAATTTCACg > 5:176661/1‑148 (MQ=255) ggAACACATACGCCAGCACCTGCGCCACCGCCAGGTACAGCCCCGCCGGGATCTCCTGCTCAAG‑TTCGGTGGAGTAATAGATCGCCCGCGCCAGCGCCGGCGATTCGAGGATCTGGATGTTGTGCTCCACGCCAATTTCACGAATCtt > 2:196140/1‑148 (MQ=255) gAACACATACGCCAGCACCTGCGCCACCGCCAGGTACAGCCCCGCCGGGATCTCCTGATCAAG‑TTCGGTGGAGTAATAGATCGCCCGCGCCAGCGCCGGCGATTCGAGGATCTGGATGTTGTGCTCAACGCCAATTTCACGAATCTTc > 5:234507/1‑148 (MQ=255) caTACGCCAGCACCTGCGCCACCGCCAGGTACAGCCCCGCCGGGATCTCCTGCTCAAG‑TTCGGTGGAGTAATAGATCGCCCGCGCCAGCGCCGGCGATTCGAGGATCTGGATGTTGTGCTCCACGCCAATTTCACGAATCTTCAACGcc < 7:231035/149‑1 (MQ=255) aTACGCCAGCACCTGCGCCACCGCCAGGTACAGCCCCGCCGGGATCTCCTGCTCAAG‑TTCGGTGGAGTAATAGATCGCCCGCGCCAGCGCCGGCGATTCGAGGATCTGGATGTTGTGCTCCACGCCAATTTCACGAATCTTCAACGCCa < 5:245705/149‑1 (MQ=255) tACGCCAGCACCTGCGCCACCGCCAGGTACAGCCCCGCCGGGATCTCCTGCTCAAG‑TTCGGTGGAGTAATAGATCGCCCGCGCCAGCGCCGGCGATTCGAGGATCTGGATGTTGTGCTCCACGCCAATTTCACGAATCTTCAACGCCAt < 5:120620/149‑1 (MQ=255) tACGCCAGCACCTGCGCCACCGCCAGGTACAGCCCCGCCGGGATCTCCTGCTCAAG‑TTCGGTGGAGTAATAGATCGCCCGCGCCAGCGCCGGCGATTCGAGGATCTGGATGTTGTGCTCCACGCCAATTTCACGAATCTTCAACGCCAt > 3:35886/1‑149 (MQ=255) cGCCAGCACCTGCGCCACCGCCAGGTACAGCCCCGCCGGGATCTCCTGCTCAAG‑TTCGGTGGAGTAATAGATCGCCCGCGCCAGCGCCGGCGATTCGAGGATCTGGATGTTGTGCTCCACGCCAATTTCACGAATCTTCAACGCCATg > 4:151109/1‑148 (MQ=255) gCCAGCACCTGCGCCACCGCCAGGTACAGCCCCGCCGGGATCTCCTGCTCAAG‑TTCGGTGGAGTAATAGATCGCCCGCGCCAGCGCCGGCGATTCGAGGATCTGGATGTTGTGCTCCACGCCAATTTCACGAATCTTCAACGCCATGa > 2:121927/1‑148 (MQ=255) cAGCACCTGCGCCACCGCCAGGTACAGCCCCGCCGGGATCTCCTGCTCAAG‑TTCGGTGGAGTAATAGATCGCCCGCGCCAGCGCCGGCGATTCGAGGATCTGGATGTTGTGCTCCACGCCAATTTCACGAATCTTCAACGCCATGAAAt > 8:299781/1‑149 (MQ=255) aGCACCTGCGCCACCGCCAGGTACAGCCCCGCCGGGATCTCCTGCTCAAG‑TTCGGTGGAGTAATAGATCGCCCGCGCCAGCGCCGGCGATTCGAGGATCTGGATGTTGTGCTCCACGCCAATTTCACGAATCTTCAACGCCATGAAATc < 7:172794/149‑1 (MQ=255) aGCACCTGCGCCACCGCCAGGTACAGCCCCGCCGGGATCTCCTGCTCAAG‑TTCGGTGGAGTAATAGATCGCCCGCGCCAGCGCCGGCGATTCGAGGATCTGGATGTTGTGCTCCACGCCAATTTCACGAATCTTCAACGCCATGAAATc < 3:151109/149‑1 (MQ=255) aCCGCCAGGTACAGCCCCGCCGGGATCTCCTGCTCAAG‑TTCGGTGGAGTAATAGATCGCCCGCGCCAGCGCCGGCGATTCGAGGATCTGGATGTTGTGCTCCACGCCAATTTCACGAATCTTCAACGCCATGAAATCGCTACCCTTGGc < 1:121927/149‑1 (MQ=255) aCCGCCAGGTACAGCCCCGCCGGGATCTCCTGCTCAAG‑TTCGGTGGAGTAATAGATCGCCCGCGCCAGCGCCGGCGATTCGAGGATCTGGATGTTGTGCTCCACGCCAATTTCACGAATCTTCAACGCCATGAAATCGCTACCCTTGGc > 4:306636/1‑149 (MQ=255) ccAGGTACAGCCCCGCCGGGATCTCCTGCTCAAG‑TTCGGTGGAGTAATAGATCGCCCGCGCCAGCGCCGGCGATTCGAGGATCTGGATGTTGTGCTCCACGCCAATTTCACGAATCTTCAACGCCATGAAATCGCt < 7:288275/136‑1 (MQ=255) ccAGGTACAGCCCCGCCGGGATCTCCTGCTCAAG‑TTCGGTGGAGTAATAGATCGCCCGAGCCAGCGCCGGCGATTCGAGGATCTGGATGTTGTGCTCCACGCCAATTTCACGAATCTTCAACGCCATGAAATCGCt > 8:288275/1‑136 (MQ=255) gTACAGCCCCGCCGGGATCTCCTGCTCAAG‑TTCGGTGGAGTAATAGATCGCCCGCGCCAGCGCCGGCGATTCGAGGATCTGGATGTTGTGCTCCACGCCAATTTCACGAATCTTCAACGCCATGAAATCGCTACCCTTGGCCagcagc > 4:63312/1‑148 (MQ=255) aGCCCCGCCGGGATCTCCTGCTCAAG‑TTCGGTGGAGTAATAGATCGCCCGCGCCAGCGCCGGCGATTCGAGGATCTGGATGTTGTGCTCCACGCCAATTTCACGAATCTTCAACGCCATGAAATCGCTACCCTTGGCCAGCAGCAACgg < 3:113800/149‑1 (MQ=255) aGCCCCGCCGGGATCTCCTGCTCAAG‑TTCGGTGGAGTAATAGATCGCCCGCGCCAGCGCCGGCGATTCGAGGATCTGGATGTTGTGCTCCACGCCAATTTCACGAATCTTCAACGCCATGAAATCGCTACCCTTGGCCAGCAGCAACgg > 3:277467/1‑149 (MQ=255) gCCCCGCCGGGATCTCCTGCTCAAG‑TTCGGTGGAGTAATAGATCGCCCGCGCCAGCGCCGGCGATTCGAGGATCTGGATGTTGTGCTGCACGCCAATTTCACGAATCTTCAACGCCATGAAATAGCTACCCTTGGCCAGCAGCAACGgc > 3:277553/1‑149 (MQ=255) ccccGCCGGGATCTCCTGCTCAAG‑TTCGGTGGAGTAATAGATCGCCCGCGCCAGCGCCGGCGATTCGAGGATCTGGATGTTGTGCTCCACGCCAATTTCACGAATCTTCAACGCCATGAAATCGCTACCCTTGGCCAGCAGCAACGgcg > 1:254956/1‑149 (MQ=255) cgctccgGGATCTCCTGCTCATG‑TTCGGTGGAGTAATAGATCGCCCGCGCCAGCGCCGGCGATTCGAGGATCTGGATGTTGTGCTCCACGCCAATTTCACGAATCTTCAACGCCATGAAATCGCTACCCTTGGCCAGCAGCAACGgcgc < 6:234507/145‑1 (MQ=255) ccgccgGGATCTCATGCTCAAG‑TTCGGTGGAGTAATACATCGCCCGCGCCAGCGCCGGCGAATCGACGATCTGGATGTTGTGCTCCACTACAATTTCACGAATCTTCACAGCCATGAAAAAGCAACCCTTGGCCAGCAGCAACGgcgca > 8:259551/1‑148 (MQ=255) cgccgGGATCTCCTGCTCAAG‑TTCGGTGGAGTAATAGATCGCCCGCGCCAGCGCCGGCGATTCGAGGATCTGGATGTTGTGCTCCACGCCAATTTCACGAATCTTCAACGCCATGAAATCGCTACCCTTGGCCAGCAGCAACGGcgccg < 3:63312/149‑1 (MQ=255) ccgGGATCTCCTGCTCAAG‑TTCGGTGGAGTAATAGATCGCCCGCGCCAGCGCCGGCGATTCGAGGATCTGGATGTTGTGCTCCACGCCAATTTCACGAATCTTCAACGCCATGAAATCGCTAc < 8:29078/123‑1 (MQ=255) ccgGGATCTCCTGCTCAAG‑TTCGGTGGAGTAATAGATCGCCCGCGCCAGCGCCGGCGATTCGAGGATCTGGATGTTGTGCTCCACGCCAATTTCACGAATCTTCAACGCCATGAAATCGCTAc > 7:29078/1‑123 (MQ=255) cgGGATCTCCTGCTCAAG‑TTCGGTGGAGTAATAGATCGCCCGCGCCAGCGCCGGCGATTCGAGGATCTGGATGTTGTGCTCCACGCCAATTTCACGAATCTTCAACGCCATGAAATCGCTACCCTTGGCCAGCAGCAACGGCGCCGCAc < 7:299781/149‑1 (MQ=255) ccTGCGCCAG‑TTCCGTGGAGTAATCGATCGCCCGCGCCAGCGCCGGCGATTCGAGGATCTGGATGTTGTGCTCCACGCCAATTTCACGAATCTTCAACGCCATGAACTCGCTACCCTTGGCCAGCAGCAACGGCGCCGCACCGCCTTtc < 4:35886/149‑1 (MQ=255) cTGCTCAAG‑TTCGGTGGAGTAATAGATCGCCCGCGCCAGCGCCGGCGATTCGAGGATCTGGATGTTGTGCTCCACGCCAATTTCACGAATCTTCAACGCCATGAAATCGCTACCCTTGGCCAGCAGCAACGGCGCCGCACCGCCTTtc < 6:122910/148‑1 (MQ=255) cTGCTCAAG‑TTCGGTGGAGTAATAGATCGCCCGCGCCAGCGCCGGCGATTCGAGGATCTGGATGTTGTGCTCCACGCCAATTTCACGAATCTTCAACGCCATGAAATCGCTACCCTTGACCAGCAGCAACGGCGCCGCACCGCCtt < 6:176661/146‑1 (MQ=255) tGCTCAAG‑TTCGGTGGAGTAATAGATCGCCCGCGCCAGCGCCGGCGATTCGAGGATCTGGAtgt > 7:217682/1‑64 (MQ=255) tGCTCAAG‑TTCGGTGGAGTAATAGATCGCCCGCGCCAGCGCCGGCGATTCGAGGATCTGGAtgt < 8:217682/64‑1 (MQ=255) cTCAAG‑TTCGGTGGAGTAATAGATGGCCCGCGCCAGCGCCGGCGATTCGAGGATCTGGATGTTGTGCTCCACGCCAATTTCACGAATCTTCAACGCCATGAAAt > 4:172423/1‑104 (MQ=255) cTCAAG‑TTCGGTGGAGTAATAGATGGCCCGCGCCAGCGCCGGCGATTCGAGGATCTGGATGTTGTGCTCCACGCCAATTTCACGAATCTTCAACGCCATGAAAt < 3:172423/104‑1 (MQ=255) tCAAG‑TTCGGTGGAGTAATAGATCGCCCGCGCCAGCGCCGGCGATTCGAGGATCTGGATGTTGTGCTCCACGCCAATTTCACGAATCTTCAACGCCATGAAATCGCTACCCTTGGCCAGCAGCAACGGCGCCGCACCGCCTTTCTCCgg > 3:137061/1‑149 (MQ=255) aaG‑TTCGGTGGAGTAATAGATCGCCCGCGCCAGCGCCGGCGATTCGAGGATCTGGATGTTGTGCTCCACGCCAATTTCACGAATCTTCAACGCCATGAAATCGCTACCCTTGGCCAGCAGCAACGGCGCCGCACCGCCTTTCTCCGGGt > 6:58511/1‑149 (MQ=255) ggTGGAGTAATAGATCGCCCGCGCCAGCGCCGGCGATTCGAGGATCTGGATGTTGTGCTCCACGCCAATTTCACGAATCTTCAACGCCATGAAATCGCTACCCTTGGCCAGCAGCAACGGCGCCGCACCGCCTTTCTCCGGGTCGTAtt < 2:275323/149‑1 (MQ=255) aGTAATAGATCGCCCGCGCCAGCGCCGGCGATTCGAGGATCTGGATGTTGTGCTCCACGCCAATTTCACGAATCTTCAACGCCATGAAATCGCTACCCTTGGCCAGCAGCAACGGCGCCGCACCGCCTTTCTCCGGGTCGTATTGCaaa < 3:127085/149‑1 (MQ=255) tcgaaTCGCCGGCGCTGGCGCGGGCGATTCGAGGATCTGGATGTTGTGCTCCACGCCAATTTCACGAATCTTCAACGCCATGAAATCGCTACCCTTGGCCAGCAGCAACGGCGCCGCACCGCCTTTCTCCGGGTCGTATTGCAAAGCCa > 6:197569/5‑149 (MQ=255) aTAGATCGCCCGCGCCAGCGCCGGCGATTCGAGGATCTGGATGTTGTGCTCCACGCCAATTTCACGAATCTTCAACGCCATGAAATCGCTACCCTTGGCCAGCAGCAACGGCGCCGCACCGCCTTTCTCCGGGTCGTATTGCAAAGCCa > 1:104053/1‑149 (MQ=255) tAGATCGCCCGCGCCAGCGCCGGCGATTCGAGGATCTGGATGTTGTGCTCCACGCCAATTTCACGAATCTTCAACGCCATGAAATCGCTACCCTTGGCCAGCAGCAACGGCGCCGCACCGCCTTTCTCCGGGTCGTATTGCAAAGCCAc > 3:202907/1‑149 (MQ=255) aGATCGCCCGCGCCAGCGCCGGCGATTCGAGGATCTGGATGTTGTGCTCCACGCCAATTTCACGAATCTTCAACGCCATGAAATCGCTACCCTTGGCCAGCAGCAACGGCGCCGCACCGCCTTTCTCCGGGTCGTATTGCAAAGCCAcc < 6:180321/149‑1 (MQ=255) gATCGCCCGCGCCAGCGCCGGCGATTCGAGGATCTGGATGTTGTGCTCCACGCCAATTTCACGAATCTTCAACGCCATGAAATCGCTACCCTTGGCCAGCAGCAACGGCGCCGCACCGCCTTTCTCCGGGTCGTATTGCAAAGCCAcc < 1:196140/148‑1 (MQ=255) tCGCCCGCGCCAGCGCCGGCGATTCGAGGATCTGGATGTTGTGCTCCACGCCAATTTCACGAATCTTCAACGCCATGAAATCGCTACCCTTGGCCAGCAGCAACGGCGCCGCACCGCCTTTCTCCGGGTCGTAtt > 1:33168/1‑135 (MQ=255) tCGCCCGCGCCAGCGCCGGCGATTCGAGGATCTGGATGTTGTGCTCCACGCCAATTTCACGAATCTTCAACGCCATGAAATCGCTACCCTTGGCCAGCAGCAACGGCGCCGCACCGCCTTTCTCCGGGTCGTAtt < 2:33168/135‑1 (MQ=255) cccGCGCCAGCGCCGGCGATTCGAGGATCTGGATGTTGTGCTCCACGCCAATTTCACGAATCTTCAACGCCATGAAATCGCTACCCTTGGCCAGCAGCAACGGCGCCGCACCGCCTTTCTCTGGGTCGTATTGCAAAGCCAcc < 7:3027/143‑1 (MQ=255) cccGCGCCAGCGCCGGCGATTCGAGGATCTGGATGTTGTGCTCCACGCCAATTTCACGAATCTTCAACGCCATGAAATCGCTACCCTTGGCCAGCAGCAACGGCGCCGCACCGCCTTTCTCTGGGTCGTATTGCAAAGCCAcc > 8:3027/1‑143 (MQ=255) ccGCGCCAGCGCCGGCGATTCGAGGATCTGGATGTTGTGCTCCACGCCAATTTCACGAATCTTCAACGCCATGAAATCGCTACCCTTGGCCAGCAGCAACGGCGCCGCACCGCCTTTCTCCGGGTCGTATTGCAAAGCCACCGCATAAt < 2:254956/149‑1 (MQ=255) cgcgCCAGCGCCGGCGATTCGAGGATCTGGATGTTGTGCTCCACGCCAATTTCACGAATCTTCAACGCCATGAAATCGCTACCCTTGGCCAGCAGCAACGGCGCCGCACCGCCTTTCTCCGGGTCGTATTGCAAAGCCACCGCATAATg < 8:167166/149‑1 (MQ=255) | GCAGGTCGTCCTTCAGTGGCTCTGGGCGCTTGCCCTTGCCGGCGCGGTATTGGCGAATCTGGAACACATACGCCAGCACCTGCGCCACCGCCAGGTACAGCCCCGCCGGGATCTCCTGCTCAAG‑TTCGGTGGAGTAATAGATCGCCCGCGCCAGCGCCGGCGATTCGAGGATCTGGATGTTGTGCTCCACGCCAATTTCACGAATCTTCAACGCCATGAAATCGCTACCCTTGGCCAGCAGCAACGGCGCCGCACCGCCTTTCTCCGGGTCGTATTGCAAAGCCACCGCATAATG > NC_002947/4945470‑4945764 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |