| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_002947 | 1,070,248 | +GA | intergenic (+48/+94) | aroP‑I → / ← PP_0928 | aromatic amino acid transport protein/K+‑dependent Na+/Ca+ exchanger‑like protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,070,246 | 1 | . | G | 90.5% | 225.1 / 17.7 | 74 | intergenic (+46/+96) | aroP‑I/PP_0928 | aromatic amino acid transport protein/K+‑dependent Na+/Ca+ exchanger‑like protein |
| Reads supporting (aligned to +/- strand): ref base . (2/5); new base G (34/33); total (36/38) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.31e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.96e-01 | |||||||||||
| * | NC_002947 | 1,070,246 | 2 | . | A | 90.5% | 217.0 / 17.9 | 74 | intergenic (+46/+96) | aroP‑I/PP_0928 | aromatic amino acid transport protein/K+‑dependent Na+/Ca+ exchanger‑like protein |
| Reads supporting (aligned to +/- strand): ref base . (2/5); new base A (34/33); total (36/38) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.31e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.11e-01 | |||||||||||
CCTGACGCCGCCGATTCGCATCTCGGTAATGCTGATCCCGGCATGGATCGCTGTGCTGTGGGTGGCTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGG‑TTTGTTCGTAAGGGGTATGCCGTTAGGTTTTCGGCGCCT‑‑GT‑‑G‑‑ATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGC‑GATGAAAGCCTAAAGGCATGCGTCTGGCGGCCCTGACGCGTTCCCCTTCCATGCCCCTCAATGCTGCCTCCGCCAAGCACGCACAGTGGTGTACAGCAA > NC_002947/1070098‑1070383 || ccTGACGCCGCCGATTCGCATCTCGGTAATGCTGATCCCGGCATGGATCGCTGTGCTGTGGGTGGCTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGG‑TTTGTTCGTAAGGGGTATGCCGTTAGGTTTTCGGCGCCt‑‑gt < 1:338206/149‑1 (MQ=255) cgccgATTCGCATCTCGGTAATGCTGATCCCGGCATGGATCGCTGTGCTGTGGGTGGCTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGG‑TTTGTTCGTAAGGGGTATGCCGTTAGGTTTTCGGCGCCT‑‑GT‑‑G‑‑agatcga < 2:7901/149‑7 (MQ=255) cgccgATTCGCATCTCGGTAATGCTGATCCCGGCATGGATCGCTGTGCTGTGGGTGGCTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGG‑TTTGTTCGTAAGGGGTATGCCGTTAGGTTTTCGGCGCCT‑‑GT‑‑G‑‑agatcga < 8:218706/149‑7 (MQ=255) gccgATTCGCATCTCGGTAATGCTGATCCCGGCATGGATCGCTGTGCTGTGGGTGGCTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGG‑TTTGTTCGTAAGGGGTATGCCGTTAGGTTTTCGGCGCCT‑‑GT‑‑G‑‑agatcgag > 8:60396/1‑142 (MQ=255) gccgATTCGCATCTCGGTAATGCTGATCCCGGCATGGATCGCTGTGCTGTGGGTGGCTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGG‑TTTGTTCGTAAGGGGTATGCCGTTAGGTTTTCGGCGCCT‑‑GT‑‑G‑‑agatcgag > 2:312309/1‑142 (MQ=255) aTTCGCATCTCGGTAATGCTGATCCCGGCATGGATCGCTGTGCTGTGGGTGGCTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGG‑TTTGTTCGTAAGGGGTATGCCGTTAGGTTTTCGGCGCCT‑‑GTGAG‑‑ATCGAGcgcc > 5:336192/1‑149 (MQ=255) ttCGCATCTCGGTAATGCTGATCCCGGCATGGATCGCTGTGCTGTGGGTGGCTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGG‑TTTGTTCGTAAGGGGTATGCCGTTAGGTTTTCGGCGCTt‑‑gt < 4:70403/135‑1 (MQ=255) ttCGCATCTCGGTAATGCTGATCCCGGCATGGATCGCTGTGCTGTGGGTGGCTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGG‑TTTGTTCGTAAGGGGTATGCCGTTAGGTTTTCGGCGCTt‑‑gt > 3:70403/1‑135 (MQ=255) gCATCTCGGTAATGCTGATCCCGGCATGGATCGCTGTGCTGTGGGTGGCTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCTGG‑TTTGTTCGTAAGTGGTATGCCGTTAGGTTTTCGGAGCCT‑‑GTGAG‑‑ATCGATCGCcgcgc > 4:295224/1‑149 (MQ=255) cATCTCGGTAATGCTGATCCCGGCATGGATCGCTGTGCTGTGGGTGGCTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGG‑TTTGTTCGTAAGGGGTATGCCGTTAGGTTTTCGGCGCCT‑‑GTGAG‑‑ATCGAGCGCcgcgcg > 3:186581/1‑149 (MQ=255) tcGGTAATGCTGATCCCGGCATGGATCGCTGTGCTGTGGGTGGCTTTCAAGCTGAAGCAGGCTCGCCAGGCCAAGGGCTGATCGGG‑TTTGTTCGTAAGGGGTATGCCGTTAGGTTTTCGGCGCCT‑‑GTGAG‑‑ATCGAGCGCCGCgcgggcg > 5:179424/1‑149 (MQ=255) tcGGTAATGCTGATCCCGGCATGGATCGCTGTGCTGTGGGTGGCTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGG‑TTTGTTCGTAAGGGGTATGCCGTTAGGTTTTCGGCGCCT‑‑GTGAG‑‑ATCGAGCGCCGCgcgggcg > 5:184685/1‑149 (MQ=255) ggTAATGCTGATCCCGGCATGGATCGCTGTGCTGTGGGTGGCTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGG‑TTTGTTCGTAAGGGGTATGCCGTTAGGTTTTCGGCGCCT‑‑GTGAG‑‑ATCGAGCGCCGCgcggg < 5:135908/145‑1 (MQ=255) gTAATGCTGATCCCGGCATGGATCGCTGTGCTGTGGGTGGCTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGG‑TTTGTTCGTAAGGGGTATGCCGTTAGGTTTTCGGCGCCT‑‑GTGAG‑‑ATCGATCGCCGCGCGGgcggcg > 8:344659/1‑149 (MQ=255) gTAATGCTGATCCCGGCATGGATCGCTGTGCTGTGGGTGGCTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGG‑TTTGTTCGTAAGGGGTATGCCGTTAGGTTTTCGGCGCCT‑‑GTGAG‑‑ATCGAGCGCCGCGCGGgcggcg > 3:25517/1‑149 (MQ=255) aTGCTGATCCCGGCATGGATCGCTGTGCTGTGGGTGGCTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGG‑TTTGTTCGTAAGGGGTATGCCGTTAGGTTTTCGGCGCCT‑‑GTGAG‑‑ATCGAGCGCCGCGCGGGCGGCGCTc < 1:45676/149‑1 (MQ=255) cTGATCCCGGCATGGATCGCTGTGCTGTGGGTGGCTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGG‑TTTGTTCGTAAGGGGTATGCCGTTAGGTTTTCGGCGCCT‑‑GTGAG‑‑ATCGAGCGCCGCCCGCGCGGCGCTCGa < 6:331896/148‑1 (MQ=38) ctCCCGGCATGGATCGCTGTGCTGTGGGGGGCTTACAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGG‑TTTGTTCGTAACGGGTCTGCCGTTAGGTGTTCGGCGCCT‑‑GTGAG‑‑AGCGAGCGCCGCGCGGGCGGCGCTCGAtctc < 1:135331/148‑1 (MQ=38) tCCCGGCATGGATCGCTGTGCTGTGGGTGGCTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGG‑TTTGTTCGTAAGGGGTATGCCGTTAGGTTTTCGGCGCCT‑‑GTGAG‑‑ATCGAGCGCCGCGCGGGCGGCGCTCGATCTca < 4:265790/149‑1 (MQ=255) aTGGATCGCTGTGCTGTGGGTGGCTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGG‑TTTGTTCGTAAGGGGTATGCCGTTAGGTTTTCGGCGCCT‑‑GTGAG‑‑ATCGAGCGCCGCCCGCGCGGCGCTCGATCTCACAGGC‑gc < 7:60396/149‑2 (MQ=38) tGGATCGCTGTGCTGTGGGTGGCTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGG‑TTTGTTCGTAAGGGGTATGCCGTTAGGTTTTCGGCGCCT‑‑GTGAG‑‑ATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGC‑GAt < 4:25517/149‑1 (MQ=255) aTCGCTGTGCTGTGGGTGGCTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGG‑TTTGTTCGTAAGGGGTATGCCGTTAGGTTTTCGGCGCCT‑‑GTGAG‑‑ATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGC‑GATGa > 7:78692/1‑148 (MQ=255) cGCTGTGCTGTGGGTGGCTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGG‑TTTGTTCGTAAGGGGTATGCCGTTAGGTTTTCGGCGCCT‑‑GTGAG‑‑ATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGC‑GATGaaa < 1:318030/148‑1 (MQ=255) tgtgctgtgGGTGGCTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGG‑TTTGTTCGTAAGGGGTATGCCGTTAGGTTTTCGGCGCCT‑‑GTGAG‑‑ATCGAGCGCCGCGCGGGCGGCGCTCGATCTca < 2:134303/133‑1 (MQ=255) tgtgctgtgGGTGGCTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGG‑TTTGTTCGTAAGGGGTATGCCGTTAGGTTTTCGGCGCCT‑‑GTGAG‑‑ATCGAGCGCCGCGCGGGCGGCGCTCGATCCCACAGGC‑GATGAAAGcc > 2:230516/1‑148 (MQ=255) gtggCTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGG‑TTTGTTCGTAAGGGGTATGCCGTTAGGTTTTCGGCGCCT‑‑GTGAG‑‑ATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGC‑GATGAAAGCCTAAAGGCATGc > 6:27832/1‑149 (MQ=255) ggCTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGG‑TTTGTTCGTAAGGGGTATGCCGTTAGGTTTTCGGCGCCT‑‑GTGAG‑‑ATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGC‑GATGAAAGCCTAAAGGCATGCGt < 3:291111/149‑1 (MQ=255) gCTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGG‑TTTGTTCGTAAGGGGTATGCCGTTAGGTTTTCGGCGCCT‑‑GTGAG‑‑ATAGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGC‑GATGAAAGCCTAAAGGCATGCGTc > 2:369911/1‑149 (MQ=255) tttCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGG‑TTTGTTCGTAAGGGGTATGCCGTTAGGTTTTCGGCGCCT‑‑GTGAG‑‑ATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGC‑GATGAAAGCCTAAAGGCATGCGTCTg > 6:179930/1‑149 (MQ=255) tttCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGG‑TTTGTTCGTAAGGGGTATGCCGTTAGGTTTTCGGCGCCT‑‑GTGAG‑‑ATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGC‑GATGAAAGCCTAAAGGCATGCGTCTg > 5:367544/1‑149 (MQ=255) gCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGG‑TTTGTTCGTAAGGGGTATGCCGTTAGGTTTTCGGCGCCT‑‑GTGAG‑‑ATCGCGCGCCGCGCGGGCGGCGCTCGATCTCACAGGC‑GATGAAAGCCTAAAGGCATGc > 6:331225/1‑138 (MQ=255) gCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGG‑TTTGTTCGTAAGGGGTATGCCGTTAGGTTTTCGGCGCCT‑‑GTGAG‑‑ATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGC‑GATGAAAGCCTAAAGGCATGc < 5:331225/138‑1 (MQ=255) tGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGGTTTTGTTCGTAAGGGGTATGCCGTTAGGTTTTCGGCGCCT‑‑GTGAG‑‑ATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGC‑GATGAAAGCCTAAAGGCATGCGTCTGGCGGccc > 1:55365/1‑149 (MQ=38) tGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGG‑TTTGTTCGTAAGGGGTATGCCGTTAGGTTTTCGGCGCCT‑‑GTGAG‑‑ATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGC‑GATGAAAGCCTAAAGGCATGCGTCTGGCGGCCCt > 7:109349/1‑149 (MQ=255) tGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGG‑TTTGTTCGTAAGGGGTATGCCGTTAGGTTTTCGGCGCCT‑‑GTGAG‑‑ATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGC‑GATGAAAGCCTAAAGGCATGCGTCTGGCGGCCCt > 1:53927/1‑149 (MQ=255) aagaagGCTCGCCAGGCCAAGGGCTGATCGGG‑TTTGTTCGTAAGGGGTATGCCGTTAGGTTTTCGGCGCCT‑‑GTGAG‑‑ATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGC‑GATGAAAGCCTAAAGGCATGCGTCTGGCGGCCCTGa > 1:169905/1‑149 (MQ=255) agaagGCTCGCCAGGCCAAGGGCTGATCGGG‑TTTGTTCGTAAGGGGTATGCCGTTAGGTTTTCGGCGCCT‑‑GTGAG‑‑ATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGC‑GATGAAAGCCTAAAGGCATGCGTCTGGCGGCCCTGAc < 6:336192/149‑1 (MQ=255) gaagGCTCGCCAGGCCAAGGGCTGATCGGG‑TTTGTTCGTAAGGGGTATGCCGTTAGGTTTTCGGCGCCT‑‑GTGAG‑‑ATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGC‑GATGAAAGCCTAAAGGCATGCGTCTGGCGGCCCTGa < 7:205129/147‑1 (MQ=255) gaagGCTCGCCAGGCCAAGGGCTGATCGGG‑TTTGTTCGTAAGGGGTATGCCGTTAGGTTTTCGGCGCCT‑‑GTGAG‑‑ATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGC‑GATGAAAGCCTAAAGGCATGCGTCTGGCGGCCCTGa > 8:205129/1‑147 (MQ=255) gaagGCTCGCCAGGCCAAGGGCTGATCGGG‑TTTGTTCGTAAGGGGTATGCCGTTAGGTTTTCGGCGCCT‑‑GTGAG‑‑ATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGC‑GATGAAAGCCTAAAGGCATGCGTCTGGCGGCCCTGAcg > 7:319552/1‑149 (MQ=255) cTCGCCAGGCCAAGGGCTGATCGGG‑TTTGTTCGTAAGGGGTATGCCGTTAGGTTTTCGGCGCCT‑‑GTGAG‑‑ATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGC‑GATGAAAGCCTAAAGGCATGCGTCTGGCGGCCCTGACGCGTTc < 7:344659/149‑1 (MQ=255) cTCGCCAGGCCAAGGGCTGATCGGG‑TTTGTTCGTAAGGGGTATGCCGTTAGGTTTTCGGCGCCT‑‑GTGAG‑‑ATCGAGCGCCGCCCGCGCGGCGCTCGATCTCACAGGC‑GCCGaaaa < 6:354355/114‑2 (MQ=21) cTCGCCAGGCCAAGGGCTGATCGGG‑TTTGTTCGTAAGGGGTATGCCGTTAGGTTTTCGGCGCCT‑‑GTGAG‑‑ATCGAGCGCCGCCCGCGCGGCGCTCGATCTCACAGGC‑GCCGaaaa > 5:354355/1‑113 (MQ=21) tCGCCAGGCCAAGGGCTGATCGGG‑TTTGTTCGTAAGGGGTATGCCGTTAGGTTTTCGGCGCCT‑‑GTGAG‑‑ATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGC‑GATGAAAGCCTAAAGGCATGCGTc > 7:205813/1‑129 (MQ=255) tCGCCAGGCCAAGGGCTGATCGGG‑TTTGTTCGTAAGGGGTATGCCGTTAGGTTTTCGGCGCCT‑‑GTGAG‑‑ATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGC‑GATGAAAGCCTAAAGGCATGCGTc < 8:205813/129‑1 (MQ=255) tCGCCAGGCCAAGGGCTGATCGGG‑TTTGTTCGTAAGGGGTATGCCGTTAGGTTTTCGGCGCCT‑‑GTGAG‑‑ATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGC‑GATGAAAGCCTAAAGGCATGCGTCTGGCGGCCCTGACGCGt > 5:139683/1‑146 (MQ=255) tCGCCAGGCCAAGGGCTGATCGGG‑TTTGTTCGTAAGGGGTATGCCGTTAGGTTTTCGGCGCCT‑‑GTGAG‑‑ATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGC‑GATGAAAGCCTAAAGGCATGCGTCTGGCGGCCCTGACGCGt < 6:139683/146‑1 (MQ=255) ccAGGCCAAGGGCTGATCGGG‑TTTGTTCGTAAGGGGTATGCCGTTAGGTTTTCGGCGCCT‑‑GTGAG‑‑ATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGC‑GATGAAAGCCTAAAGGCATGCGTCTGGCGGCCCTGACGCGTTCCCCt > 1:227536/1‑149 (MQ=255) ccAGGCCAAGGGCTGATCGGG‑TTTGTTCGTAAGGGGTATGCCGTTAGGTTTTCGGCGCCT‑‑GTGAG‑‑ATCGAGCGCCGCGCGGGCGGCGCTCGATCCCACAGGC‑GATGAAAGCCTAAAGGCATGCGTCTGGCGGCCCTGACGCGTTCCCCt < 1:230516/149‑1 (MQ=255) gCCAAGGGCTGATCGGG‑TTTGTTCGTAAGGGGTATGCCGTTAGGTTTTCGGCGCCT‑‑GTGAG‑‑ATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGC‑GATGAAAGCCTAAAGGCATGCGTCTGGCGGCCCTGACGCGTTCCCCTTCCa > 7:266035/1‑149 (MQ=255) gCCAAGGGCTGATCGGG‑TTTGTTCGTAAGGGGTATGCCGTTAGGTTTTCGGCGCCT‑‑GTGAG‑‑ATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGC‑GATGAAAGCCTAAAGGCATGCGTCTGGCGGCCCTGACGCGTCCCCCTTCCa < 8:78692/149‑1 (MQ=255) ccAAGGGCTGATCGGG‑TTTGTTCGTAAGGGGTATGCCGTTAGGTTTTCGGCGCCT‑‑GTGAG‑‑ATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGC‑GATGAAAGCCTAAAGGCATGCGTCt < 4:309416/122‑1 (MQ=255) ccAAGGGCTGATCGGG‑TTTGTTCGTAAGGGGTATGCCGTTAGGTTTTCGGCGCCT‑‑GTGAG‑‑ATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGC‑GATGAAAGCCTAAAGGCATGCGTCt > 3:309416/1‑122 (MQ=255) acAAGGGCTGATCGGG‑TTTGTTCGTAAGGGGTATGCAGTTAGGTTTTCGGCGCCT‑‑GT‑‑GACATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGC‑GATGAAAGCCTAAAGGCATGCGTCTGGCGGCCCTGACGCGTTCCCCTTCCAt < 3:295224/148‑1 (MQ=255) aGGGCTGATCGGG‑TTTGTTCGTAAGGGGTATGCCGTTAGGTTTTCGGCGCCT‑‑GTGAG‑‑ATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGC‑GATGAAAGCCTAAAGGCATGCGTCTGGCGGCCCTGACGCGTTCCCCTTCCATGcc > 8:320186/1‑149 (MQ=255) gggCTGATCGGG‑TTTGTTCGTAAGGGGTATGCCGTTAGGTTTTCGGCGCCT‑‑GTGAG‑‑ATCGAGCGCCGCGCGGGAGGCGCTCGATCTCACAGGC‑GATGAAAGCCTAAAGGCATGCGTCTGGCGGCCCTGACGCGTTCCCCTTCCATGccc > 8:171436/1‑149 (MQ=255) cTGATCGGG‑TTTGTTCGTAAGGGGTATGCCGTTAGGTTTTCGGCGCCt‑‑gt > 8:172282/1‑50 (MQ=255) aTCGGG‑TTTGTTCGTAAGGGGTATGCCGTTAGGTTTTCGGCGCCT‑‑GTGAG‑‑ATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGC‑GATGAAAGCCTAAAGGCATGCGTCTGGCGGCCCTGACGCGTTCCCCTTCCATGCCCCTCAAt < 8:319552/149‑1 (MQ=255) ggg‑TTTGTTCGTAAGGGGTATGCCGTTAGGTTTTCGGCGCCT‑‑GTGAG‑‑ATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGC‑GATGAAAGCCTAAAGGCATGCGTCTGGCGGCCCTGACGCGTTCCCCTTCCATGCCCCTCAAtgc < 5:27832/148‑1 (MQ=255) g‑TTTGTTCGTAAGGGGTATGCCGTTAGGTTTTCGGCGCCT‑‑GTGAG‑‑ATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGC‑GATGAAAGCCTAAAGGCATGCGTCTGGCGGCCCTGACGCGTTCCCCTTCCATGCCCCTCAAtgctgc > 7:62894/1‑149 (MQ=255) gTAAGGGGTATGCCGTTAGGTTTTCGGCGCCT‑‑GTGAG‑‑ATCGAGCGCCCCGCGGGCCGCGCAAGATCTCACAGCC‑GATGAAAGCCAAAAGGCATGCGTATGGCGGCCCAGACCCGATCCCCTTCCAAGCCCCTCAAATCTGCCTCCGcc > 4:157644/1‑148 (MQ=255) tAAGGGGTATGCCGTTAGGTTTTCGGCGCCT‑‑GTGAG‑‑ATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGC‑GATGAAAGCCTAAAGGCATGCGTCTGGCGGCCCTGACGCGTTCCCCTTCCATGCCCCTCAATGCTGCCTCCGcc > 7:146307/1‑147 (MQ=255) ggTATGCCGTTAGGTTTTCGGCGCCT‑‑GTGAG‑‑ATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGC‑GATGAAAGCCTAAAGGCATGCGTCTGGCGGCCCTGACGCGTTCCCCTTCCATGCCCCTCAATGCTGCCTCCGCCAAgcacg < 4:186581/149‑1 (MQ=255) aTGCCGTTAGGTTTTCGGCGCCT‑‑GTGAG‑‑ATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGC‑GATGAAAGCCTATAGGCATGCGTCTGGCGGCCCTGACGCGTTCCCCTTCCATGCCCCTCAATGCTGCCTCCGCCAAgcacgca > 1:117446/1‑148 (MQ=255) gctgTTAGGTTTTCGGCGCCTGGGA‑‑G‑‑ATGGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGC‑GATGAAAGCCTAAAGGCATGCGTCTGGCGGCCCTGACGCGTTCCCCTTCCATGCCCCTCATTGCTGCCTCCGCCAAGCACGcaca < 7:52716/145‑1 (MQ=38) ttAGGTTTTCGGCGCCT‑‑GTGAG‑‑ATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGC‑GATGAAAGCCTAAAGGCATGCGTCTGGCGGCCCTGACGCGTTCCCCTTCCATGCCCCTCAATGCTGCCTCCGCCAAGCACGCACAgtggt < 8:109349/149‑1 (MQ=255) ttAGGTTTTCGGCGCCT‑‑GTGAG‑‑ATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGC‑GATGAAAGCCTAAAGGCATGCGTCTGGCGGCCCTGACGCGTTCCCCTTCCATGCCCCTCAATGCTGCCTCCGCCAAGCACGCACAgtggt < 7:171436/149‑1 (MQ=255) gTTTTCGGCGCCT‑‑GTGAG‑‑ATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGC‑GATGAAAGCCTAAAGGCATGCGTCTGGCGGCCCTGACGCGTTCCCCTTCCATGCCCCTCAATGCTGCCTCCGCCAAgcacgca < 1:182102/138‑1 (MQ=255) gTTTTCGGCGCCT‑‑GTGAG‑‑ATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGC‑GATGAAAGCCTAAAGGCATGCGTCTGGCGGCCCTGACGCGTTCCCCTTCCATGCCCCTCAATGCTGCCTCCGCCAAGCACGCACAgtg > 7:254226/1‑143 (MQ=255) gTTTTCGGCGCCT‑‑GTGAG‑‑ATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGC‑GATGAAAGCCTAAAGGCATGCGTCTGGCGGCCCTGACGCGTTCCCCTTCCATGCCCCTCAATGCTGCCTCCGCCAAGCACGCACAgtg < 8:254226/143‑1 (MQ=255) ttttCGGCGCCTGGGA‑‑G‑‑ATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGC‑GATGAAAGCCTAAAGGCATGCGTCTGGCGGCCCTGACGCGTTCCCCTTCCATGCCCCTCAATGCTGCCTCCGCCAAGCACGCACAGTGGTGTACa < 3:157644/149‑1 (MQ=255) ttttCGGCGCCT‑‑GTGAG‑‑ATCGCGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGGATGAAAGCCTAAAGGCATGCGTCTGGCGGCCCGGCCGCGTTCCCCTTCCATGCCCCTCAATGCTGCCTCCGCCAAGCCCGCACAGTGGTGTAc > 1:284959/1‑149 (MQ=37) ttttCGGCGCCT‑‑GTGAG‑‑ATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGC‑GATGAAAGCCTAAAGGCATGCGTCTGGCGGCCCTGACGCGTTCCCCTTCCATGCCCCTCAATGCTGCCTCCGCCAAGCACGCACAGTGGTGTACa < 2:169905/149‑1 (MQ=255) ttCGGCGCCT‑‑GTGAG‑‑ATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGC‑GATGAAAGCCTAAAGGCATGCGTCTGGCGGCCCTGACGCGTTCCCCTTCCATGCCCCTCAATGCTGCCTCCGCCAAGCACGCACAGTGGTGTACAg < 2:53927/148‑1 (MQ=255) tCGGCGCCT‑‑GTGAG‑‑ATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGC‑GATGAAAGCCTAAAGGCATGCGTCTGGCGGCCCTGACGCGTTCCCCTTCCATGCCCCTCAATGCTGCCTCCGCCAAGCACGCACAGTGGTGTACAGc < 8:266035/148‑1 (MQ=255) tCGGCGCCT‑‑GTGAG‑‑ATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGC‑GATGAAAGCCTAAAGGCATGCGTCTGGCGGCCCTGACGCGTTCCCCTTCCATGCCCCTCAATGCTGCCTCCGCCAAGCACGCACAGTGGTGTACAGc < 1:369911/148‑1 (MQ=255) cGGCGCCT‑‑GTGAG‑‑ATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGC‑GATGAAAGCCTAAAGGCATGCGTCTGGCGGCCCTGACGCGTTCCCCTTCCATGCCCCTCAATGCTGCCTCCGCCAAGCACGCACAGTGGTGTACAGCa < 2:117446/148‑1 (MQ=255) ggCGCCT‑‑GTGAG‑‑ATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGC‑GATGAAAGCCTAAAGGCATGCGTCTGGCGGCCCTGACGCGTTCCCCTTCCATGCCCCTCAATGCTGCCTCCGCCAAGCACGCACAGTGGTGTACAGCaa < 2:55365/148‑1 (MQ=255) || CCTGACGCCGCCGATTCGCATCTCGGTAATGCTGATCCCGGCATGGATCGCTGTGCTGTGGGTGGCTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGG‑TTTGTTCGTAAGGGGTATGCCGTTAGGTTTTCGGCGCCT‑‑GT‑‑G‑‑ATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGC‑GATGAAAGCCTAAAGGCATGCGTCTGGCGGCCCTGACGCGTTCCCCTTCCATGCCCCTCAATGCTGCCTCCGCCAAGCACGCACAGTGGTGTACAGCAA > NC_002947/1070098‑1070383 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |