| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,416,087:1 | +G | 5.7% | intergenic (+29/+90) | PP_3901 → / ← PP_3902 | hypothetical protein/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,416,087 | 1 | . | G | 5.7% | 281.3 / 10.6 | 70 | intergenic (+29/+90) | PP_3901/PP_3902 | hypothetical protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base . (30/36); new base G (2/2); total (32/38) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.19e-01 | |||||||||||
CCAGGAAGACTGGGGCGCGCTCGTCGAGGCCATGGAAGGCACCGAGGGCGTAAGCCTGGCCTTTGAAGATGATGGCGGCGTTCGTGTGACCTGGGAAAAGCCGCTAGAAGACTGATTTCGACAAACCCACCTTGCCCGCCTCGA‑GCGGGC‑TTTTTTTGCGCCATAGAAAAGTGAATTATGGGTACCACCATAACATTTATGAGCAAACCCATTGACACAAAATATGAGCATACTCATACTCGCTCCATCACCGGATAGACACCGGCCAGCAACAAAGGCAGCGAAAGTC > NC_002947/4415944‑4416232 | ccAGGAAGACTGGGGCGCGCTCGTCGAGGCCATGGAAGGCACCGAGGGCGTAAGCCTGGCCTTTGAAGATGATGGCGGCGTTCGTGTGACCTGGGAAAAGCCGCTAGAAGACTGATTTCGACAAACCCACCTTGCCCGCCTCGA‑GCggg > 8:254472/1‑149 (MQ=255) gAAGACTGGGGCGCGCTCGTCGAGGCCATGGAAGGCACCGAGGGCGTAAGCCTGGCCTTTGAAGATGATGGCGGCGTTCGTGTGACCTGGGAAAAGCCGCTAGAAGACTGATTTCGACAAACCCACCTTGCCCGCCTCGA‑GCGGGC‑ttt < 5:78572/149‑1 (MQ=255) gAAGACTGGGGCGCGCTCGTCGAGGCCATGGAAGGCACCGAGGGCGTAAGCCTGGCCTTTGAAGATGATGGCGGCGTTCGTGTGACCTGGGAAAAGCCGCTAGAAGACTGATTTCGACAAACCCACCTTGCCCGCCTCGA‑GCGGGC‑t > 3:96470/1‑147 (MQ=255) gAAGACTGGGGCGCGCTCGTCGAGGCCATGGAAGGCACCGAGGGCGTAAGCCTGGCCTTTGAAGATGATGGCGGCGTTCGTGTGACCTGGGAAAAGCCGCTAGAAGACTGATTTCGACAAACCCACCTTGCCCGCCTCGA‑GCGGGC‑t < 4:96470/147‑1 (MQ=255) gACTGGGGCGCGCTCGTCGAGGCCATGGAAGGCACCGAGGGCGTAAGCCTGGCCTTTGAAGATGATGGCGGCGTTCGTGTGACCTGGGAAAAGCCGCTAGAAGACTGATTTCGACAAACCCACCTTGCCCG‑CTCGAGGCGGGcaa > 7:16934/1‑143 (MQ=255) gACTGGGGCGCGCTCGTCGAGGCCATGGAAGGCACCGAGGGCGTAAGCCTGGCCTTTGAAGATGATGGCGGCGTTCGTGTGACCTGGGAAAAGCCGCTAGAAGACTGATTTCGACAAACCCACCTTGCCCG‑CTCGAGGCGGGcaa < 8:16934/145‑3 (MQ=255) ggggCGCGCTCGTCGAGGCCATGGAAGGCACCGAGGGCGTAAGCCTGGCCTTTGAAGATGATGGCGGCGTTCGTGTGACCTGGGAAAAGCCGCTAGAAGACTGATTTCGACAAACCCACCTTGCCCGCCTCGA‑GCGGGC‑TTTTTTTgcg > 7:50427/1‑149 (MQ=255) gggCGCGCTCGTCGAGGCCATGGAAGGCACCGAGGGCGTAAGCCTGGCCTTTGAAGATGAGGGCGGCGTTCGTGTGACCTGGGAAAAGCCGCTAGAAGACTGATTTCGACAAACCCACCTTGCCCGCCTCGA‑GCGGGC‑TTTTTTTgc < 2:4726/147‑1 (MQ=255) gcgcTCGTCGAGGGCATGGAAGGCACCGAGGGCGTAAGCCTGGCCTTTGAAGATGATGGCGGCGTTCGTGTGACCTGGGAAAAGCCGCTAGAAGACTGATTTCGACAAACCCACCTTGCCCGCCTCGA‑GCGGGC‑TTTTTTTGCGCCATa < 1:12048/149‑1 (MQ=255) gAGGCCATGGAAGGCACCGAGGGCGTAAGCCTGGCCTTTGAAGATGATGGCGGCGTTCGTGTGACCTGGGAAAAGCCGCTAGAAGACTGATTTCGACAAACCCACCTTGCCCGCCTCGA‑GTGGGC‑TTTTTTTGCGCCATAGAAAAGTGa < 5:34010/149‑1 (MQ=255) aGGCCATGGAAGGCACCGAGGGCGTAAGCCTGGCCTTTGAAGATGATGGCGGCGTTCGTGTGACCTGGGAAAAGCCGCTAGAAGACTGATTTCGACAAACCCACCTTGCCCGCCTCGA‑GCGGGC‑TTTTTTTGCGCCATAGAAAAGTGaa < 2:217829/149‑1 (MQ=255) cATGGAAGGCACCGAGGGCGTAAGCCTGGCCTTTGAAGATGATGGCGGCGTTCGTGTGACCTGGGAAAAGCCGCTAGAAGACTGATTTCGACAAACCCACCTTGCCCGCCTCGA‑GCGGGC‑TTTTTTTGCGCCATAGAAAAGTGAATTAt > 2:10156/1‑149 (MQ=255) tGGAAGGCACCGAGGGCGTAAGCCTGGCCTTTGAAGATGATGGCGGCGTTCGTGTGACCTGGGAAAAGCCGCTAGAAGACTGATTTCGACAAACCCACCTTGCCCGCCTCGA‑GCGGGC‑TTTTTTTGCGCCATAGAAAAGTGAATTATgg > 3:48321/1‑149 (MQ=255) aGGCACCGAGGGCGTAAGCCTGGCCTTTGAAGATGATGGCGGCGTTCGTGTGACCTGGGAAAAGCCGCTAGAAGACTGATTTCGACAAACCCACCTTGCCCGCCTCGA‑GCGGGC‑TTTTTTTGCGCCATAGAAAAGTGAATTATGGGTac > 3:171162/1‑149 (MQ=255) gCACCGAGGGCGTAAGCCTGGCCTTTGAAGATGATGGCGGCGTTCGTGTGACCTGGGAAAAGCCGCTAGAAGACTGATTTCGACAAACCCACCTTGCCCGCCTCGA‑GCGGGC‑TTTTTTTGCGCCATAGAAAAGTGAATTATGGGTacca > 2:79661/1‑149 (MQ=255) aCCGAGGGCGTAAGCCTGGCCTTTGAAGATGATGGCGGCGTTCGTGTGACCTGGGAAAAGCCGCTAGAAGACTGATTTCGACAAACCCACCTTGCCCGCCTCGA‑GCGGGC‑TTTTTTTGCGCCATAGAAAAGTGAATTATGGGTaccacc < 4:171162/149‑1 (MQ=255) aGGGCGTAAGCCTGGCCTTTGAAGATGATGGCGGCGTTCGTGTGACCTGGGAAAAGCCGCTAGAAGACTGATTTCGACAAACCCACCTTGCCCGCCTCGA‑GCGGGC‑TTTTTTTGCGCCATa > 1:107923/1‑121 (MQ=255) aGGGCGTAAGCCTGGCCTTTGAAGATGATGGCGGCGTTCGTGTGACCTGGGAAAAGCCGCTAGAAGACTGATTTCGACAAACCCACCTTGCCCGCCTCGA‑GCGGGC‑TTTTTTTGCGCCATa < 2:107923/121‑1 (MQ=255) gggCGTAAGCCTGGCCTTTGAAGATGATGGCGGCGTTCGTGTGACCTGGGAAAAGCCGCTAGAAGACTGATTTCGACAAACCCACCTTGCCCGCCTCGA‑GCGGGC‑TTTTTTTgc < 2:207254/114‑1 (MQ=255) gggCGTAAGCCTGGCCTTTGAAGATGATGGCGGCGTTCGTGTGACCTGGGAAAAGCCGCTAGAAGACTGATTTCGACAAACCCACCTTGCCCGCCTCGA‑GCGGGC‑TTTTTTTgc > 1:207254/1‑114 (MQ=255) gCGTAAGCCTGGCCTTTGAAGATGATGGCGGCGTTCGTGTGACCTGGGAAAAGCCGCTATAAGACTGATTTCGACAAACCCACCTTGCCCGCCTCGA‑GCGGGC‑TTTTTTTGCGCCATAGAAAAGTGAATTATGGGTACCACCATAACAt < 1:261327/149‑1 (MQ=255) gTAAGCCTGGCCTTTGAAGATGATGGCGGCGTTCGTGTGACCTGGGAAAAGCCGCTAGAAGACTGATTTCGACAAACCCACCTTGCCCGCCTCGA‑GCGGGC‑TTTTTTTGCGCCATAGAAAAGTGAATTATGGGTACCACCATAACAtt > 8:24378/1‑148 (MQ=255) aGCCTGGCCTTTGAAGATGATGGCGGCGTTCGTGTGACCTGGGAAAAGCCGCTAGAAGACTGATTTCGACAAACCCACCTTGCCCGCCTCGA‑GCGGGC‑TTTTTTTGCGCCATAGAAAAGTGAATTATGGGTACCACCATAACATTTAt < 7:42044/148‑1 (MQ=255) gCCTGGCCTTTGAAGATGATGGCGGCGTTCGTGTGACCTGGGAAAAGCCGCTAGAAGACTGATTTCGACAAACCCACCTTGCCCGCCTCGA‑GCGGGC‑TTTTTTTgcg > 6:99639/1‑107 (MQ=255) gCCTGGCCTTTGAAGATGATGGCGGCGTTCGTGTGACCTGGGAAAAGCCGCTAGAAGACTGATTTCGACAAACCCACCTTGCCCGCCTCGA‑GCGGGC‑TTTTTTTgcg < 5:99639/107‑1 (MQ=255) gCCTGGCCTTTGAAGATGATGGCGGCGTTCGTGTGACCTGGGAAAAGCCGCTAGAAGACTGATTTCGACAAACCCACCTTGCCCGCCTCGA‑GCGGGC‑TTTTTTTGCGCCATAGAAAAGTGAATTATGGGTACCACCATAACATTTATGa < 4:48321/149‑1 (MQ=255) ggCCTTTGAAGATGATGGCGGCGTTCGTGTGACCTGGGAAAAGCCGCTAGAAGACTGATTTCGACAAACCCACCTTGCCCGCCTCGA‑GCGGGC‑TTTTTTTgcgc > 6:118403/1‑104 (MQ=255) ggCCTTTGAAGATGATGGCGGCGTTCGTGTGACCTGGGAAAAGCCGCTAGAAGACTGATTTCGACAAACCCACCTTGCCCGCCTCGA‑GCGGGC‑TTTTTTTgcgc < 5:118403/104‑1 (MQ=255) aaGATGATGGCGGCGTTCTGGTGACCTGGGAAAAGCCGCTAGAATACTGAATTCGAAAAACCCACCTTCCCCGCCTCTA‑GCGGGC‑TTTTTTTGCGCCATAGAATAGTGAATTATGGGTACCACCATAACATTTATGAGCATACCCAtt < 2:259182/148‑1 (MQ=255) aaGATGATGGCGGCGTTCGTGTGACCTGGGAAAAGCCGCTAGAAGACTGATTTCGACAAACCCACCTTGCCCGCCTCGA‑GCGGGC‑TTTTTTTGCGCCATAGAAAAGTGAATTATGGGTACCACCATAACATTTATGAGCAAACCCAtt < 7:254472/148‑1 (MQ=255) aaGATGATGGCGGCGTTCGTGTGACCTGGGAAAAGCCGCTAGAAGACTGATTTCGACAAACCCACCTTGCCCGCCTCGA‑GCGGGC‑TTTTTTTGCGCCATAGAAAAGTGAATTATGGGTACCACCATAACATTTATGAGCAAACCCAtt < 1:79661/148‑1 (MQ=255) aGATGATGGCGGCGTTCGTGTGCCCTGGGAAAAGCCGCTAGAAGACTGATTTCGACAAACCCACCTTGCCCGCCTCGA‑GCGGGC‑TTTTTTTGCGCCATAGCAAAGTGAATTATGGGTACCACCAGAACATTTATGAGCAGACCCATTgc > 6:310890/1‑148 (MQ=255) tgatgGCGGCGTTCGTGTGACCTGGGAAAAGCCGCTAGAAGACTGATTTCGACAAACCCACCTTGCCCGCCTCGA‑GCGGGC‑TTTTTTTGCGCCATAGAAAAGTGAATTATGGGTACCACCATAACATTTATGAGCAAAGGCATTGaca > 1:106182/1‑148 (MQ=255) ggcgTTCGTGTGACCTGGGAAAAGCCGCTAGAAGACCGATTTCGACAAACCCACCTTGCCCGCCTCGA‑GCGGGCTTTTTTTTGCGCCATAGAAAAGTGAATTATGGGTACCACCATAACATTTATGAGCAAACCCAtt > 6:146475/1‑138 (MQ=255) ggcgTTCGTGTGACCTGGGAAAAGCCGCTAGAAGACCGATTTCGACAAACCCACCTTGCCCGCCTCGA‑GCGGGCTTTTTTTTGCGCCATAGAAAAGTGAATTATGGGTACCACCATAACATTTATGAGCAAACCCAtt < 5:146475/138‑1 (MQ=255) cgTTCGTGTGACCTGGGAAAAGCCGCTAGAAGACTGATTTCGACAAACCCACCTTGCCCGCCTCGA‑GCGGGC‑TTTTTTTGCGCCATAGAAAAGTGAATTATGGGTACCACCATAACATTTATGAGCAAACCCATTGACACAAAATATGa < 6:273196/149‑1 (MQ=255) cgTTCGTGTGACCTGGGAAAAGCCGCTAGAAGACTGATTTCGACAAACCCACCTTGCCCGCCTCGA‑GCGGGC‑TTTTTTTGCGCCATAGAAAAGTGAATTATGGGTACCACCATAACATTTATGAGCAAACCCATTGACACAAAATATGa < 8:50427/149‑1 (MQ=255) gtgtGACCTGGGAAAAGCCGCTAGAAGACTGATTTCGACAAACCCACCTTGCCCGCCTCGA‑GCGGGC‑TTTTTTTGCGCCATAGAAAAGTGAATTATg < 3:212982/97‑1 (MQ=255) gtgtGACCTGGGAAAAGCCGCTAGAAGACTGATTTCGACAAACCCACCTTGCCCGCCTCGA‑GCGGGC‑TTTTTTTGCGCCATAGAAAAGTGAATTATg > 4:212982/1‑97 (MQ=255) cTGGGAAAAGCCGCTAGAAGACTGATTTCGACAAACCCACCTTGCCCGCCTCGA‑GCGGGC‑TTTTTTTGCGCCATAGAAAAGTGAATTATGGGTACCACCATACCATTTATGAGCAAACCCATTGACACAAAATATGAGcatactcatac > 8:95399/1‑149 (MQ=255) cTGGGAAAAGCCGCTAGAAGACTGATTTCGACAAACCCACCTTGCCCGCCTCGA‑GCGGGC‑TTTTTTTGCGCCATAGAAAAGTGAATTATGGGTACCACCATAACATTTATGAGCAAACCCATTGACACAAAATATGAGcatactcatag > 2:119061/1‑148 (MQ=255) gggAAAAGCCGCTAGAAGACTGATTTCGACAAACCCACCTTGCCCGCCTCGA‑GCGGGC‑TTTTTTTGCGCCATAGAAAAGTGAATTATGGGTACCACCATAACATTTATGAGCAAACCCATTGACACAAAATATGAGcatactca < 4:110662/144‑1 (MQ=255) gggAAAAGCCGCTAGAAGACTGATTTCGACAAACCCACCTTGCCCGCCTCGA‑GCGGGC‑TTTTTTTGCGCCATAGAAAAGTGAATTATGGGTACCACCATAACATTTATGAGCAAACCCATTGACACAAAATATGAGcatactca > 3:110662/1‑144 (MQ=255) gAAAAGCCGCTAGAAGACTGATTTCGACAAACCCACCTTGCCCGCGTCGA‑GCGGGC‑TTTTTTTGCGCCATAGAAAAGTGAATTATGGGTACCACCATAACATTTATGAGCAAACCCATTGACACAAAATATGAGCATACTCATACTCGc > 1:215901/1‑149 (MQ=255) gAAAAGCCGCTAGAAGACTGATTTCGACAAACCCACCTTGCCCGCCTCGA‑GCGGGC‑TTTTTTTGCGCCATAGAAAAGTGAATTATGGGTACCACCATAACATTTATGAGCAAACCCATTGACACAAAATATGAGCATACTCATACTCGc < 5:11161/149‑1 (MQ=255) cTAGAAGACTGATTTCGACAAACCCACCTTGCCCGCCTCGA‑GCGGGC‑TTTTTTTGCGCCATAGAAAAGTGAATTATGGGTACCACCATAACATTTATGAGCAAACCCATTGACACaa > 4:34020/1‑117 (MQ=255) cTAGAAGACTGATTTCGACAAACCCACCTTGCCCGCCTCGA‑GCGGGC‑TTTTTTTGCGCCATAGAAAAGTGAATTATGGGTACCACCATAACATTTATGAGCAAACCCATTGACACaa < 3:34020/117‑1 (MQ=255) gaagaCTGATTTCGACAAACCCACCTTGCCCGCCTCGA‑GCGGGC‑TTTTTTTGCGCCATAGAAAAGTGAATTATGGGTACCACCATAACATTTATGAGCAAACCCATTGACACAAAATATGAGCATACTCATACTCGCTCCATCACCgg < 2:215901/148‑1 (MQ=255) agaCTGATTTCGACAAACCCACCTTGCCCGCCTCGA‑GCGGGC‑TTTTTTTGCGCCATAGAAAAGTGAATTATGGGTACCACCATAACATTTATGAGCAAACCCATTGACACAAAATATGAGCATACTCATACTCGCTCCATCACCGGATa < 1:10156/149‑1 (MQ=255) gaCTGATTTCGACAAACCCACCTTGCCCGCCTCGA‑GCGGGC‑TTTTTTTGCGCCATAGAAAAGTGAATTATGGGTACCACCATAACATTTATGAGCAAACCCATTGACACAAAATATGAGCATACTCATACTCGCTCCATCACCGGATAg < 6:238177/149‑1 (MQ=255) aCTGATTTCGACAAACCCACCTTGCCCGCCTCGA‑GCGGGC‑TTTTTTTGCGCCATAGAAAAGTGAATTATGGGTACCACCATAACATTTATGAGCAAACCCATTGACACAAAATATGAGCATACTCATACTCGCTCCATCACCGGATAGa > 4:256294/1‑149 (MQ=255) tttCGACAAACCCACCTTGCCCGCCTCGA‑GCGGGC‑TTTTTTTGCGCCATAGAAAAGTGAATTATGGGTACCACCATAACATTTATGAGCAAACCCATTGACACAAAATATGAGCATACTCATACTCGCTCCATCACCGGATAGACACCg < 5:310890/149‑1 (MQ=255) ttCGACAAACCCACCTTGCCCGCCTCGA‑GCGGGC‑TTTTTTTGCGCCATAGAAAAGTGAATTATGGGTACCACCATAACATTTATGAGCAAACCCATTGACACAAAATATGAGCATACTCATACTCGCTCCATCACCGGATAGACACCgg > 7:152663/1‑149 (MQ=255) gACAAACCCACCTTGCCCGCCTCGA‑GCGGGC‑TTTTTTTGCGTCATAGAAAAGTGAATTATGGGTACCACCATAACATTTATTAGCAAACCCATTGACACAAAATATGAGCATACTCATACTCGCTCCATCACCGGATAGACACCGGc > 5:296298/1‑147 (MQ=255) aCAAACCCACCTTGCCCGCCTCGA‑GCGGGC‑TTTTTTTGCGCCATAGAAAAGTGAATTATGGGTACCACCATAACATTTATGAGCAAACCCATTGACACAAAatat < 4:125589/105‑1 (MQ=255) aCAAACCCACCTTGCCCGCCTCGA‑GCGGGC‑TTTTTTTGCGCCATAGAAAAGTGAATTATGGGTACCACCATAACATTTATGAGCAAACCCATTGACACAAAatat > 3:125589/1‑105 (MQ=255) cAAACCCACCTTGCCCGCCTCGA‑GCGGGC‑TTTTTTTGCGCCATAGAAAAGTGAATTATGGGTACCACCATAACATTTATGAGCAAACCCATTGACACAAAATATGAGCATACTCATACTCGCTCCATCACCGGATAGACACCGGCCAg > 8:26391/1‑148 (MQ=255) aaaCCCACCTTGCCCGCCTCGA‑GCGGGC‑TTTTTTTGCGCCATAGAAAAGTGAATTATGGGTACCACCATAACATTTATGAGCAAACCCATTGACACAAAATATGAGCATACTCATACTCGCTCCATCACCGGATAGACACCGGCCAGc > 2:94001/1‑148 (MQ=255) cccACCTTGCCCGCCTCGA‑GCGGGC‑TTTTTTTGCGCCATAGAAAAGTGAATTATGGGTACCACCATAACATTTATGAGCAAACCCATTGACACAAAATATGAGCATACTCATACTCGCTCCATCACCGGATAGACACCGGCCAGcaac > 1:81657/1‑148 (MQ=255) cACCTTGCCCGCCTCGA‑GCGGGC‑TTTTTTTGCGCCATAGAAAAGTGAATTATGGGTACCACCATAACATTTATGAGCAAACCCATTGACACAAAATATGAGCATACTCATACTCGCTCCATCACCGGATAGACACCGGCCAGCAACaaa < 3:256294/149‑1 (MQ=255) aaaaaagCCCG‑CTCGAGGCGGGC‑TTTTTTTGCGCCATAGAAAAGTGAATTATGGGTACCACCATAACATTTATGAGCAAACCCATTGACACAAAATATGAGCATACTCATACTCGCTCCATCACCGGATAGACACCGGCCAGcaaca > 7:10001/7‑147 (MQ=255) aaagCCCG‑CTCGAGGCGGGC‑TTTTTTTGCGCCATAGAAAAGTGAATTATGGGTACCACCATAACATTTATGAGCAAACCCATTGACACAAAATATGAGCATACTCATACTCGCTCCATCACCGGATAGACACCGGCCAGCAACAAAGGc < 8:10001/146‑1 (MQ=255) ccGCCTCGA‑GCGGGC‑TTTTTTTGCGCCATAGAAAAGTGAATTATGGGTACCACCATAACATTTATGAGCAAAc > 6:60556/1‑73 (MQ=255) ccGCCTCGA‑GCGGGC‑TTTTTTTGCGCCATAGAAAAGTGAATTATGGGTACCACCATAACATTTATGAGCAAAc < 5:60556/73‑1 (MQ=255) ccGCCTCGA‑GCGGGC‑TTTTTTTGCGCCATAGAAAAGTGAATTATGGGTACCACCATAACATTTATGAGCAAACCCATTGACACAAAATATGAGCATACTCATACTCGc > 7:29574/1‑108 (MQ=255) ccGCCTCGA‑GCGGGC‑TTTTTTTGCGCCATAGAAAAGTGAATTATGGGTACCACCATAACATTTATGAGCAAACCCATTGACACAAAATATGAGCATACTCATACTCGc < 8:29574/108‑1 (MQ=255) gCCTCGA‑GCGGGC‑TTTTTTTGCGCCATAGAAAAGTGAATTATGGGTACCACCATAACATTTATGAGCAAACCCATTGACACAAAATATGAGCATACTCATACTCGCTCCATCACCGGATAGACACCGGCCAGCAACAAAGGCAGCGaaa < 7:26391/149‑1 (MQ=255) gCCTCGA‑GCGGGC‑TTTTTTTGCGCCATAGAAAAGTGAATTATGGGTACCACCATAACATTTATGAGCAAACCCATTGACACAAAATATGAGCATACTCATACTCGCTCCATCACCGGATAGACACCGGCCAGCAACAAAGGCAGCGaaa < 2:106182/149‑1 (MQ=255) gA‑GCGGGC‑TTTTTTTGCGCCATAGAAAAGTGAATTATGGGTACCACCATAACATTTATGAGCAAACCCATTGACACAAAATATGAGCATACTCATACTCGCTCCATCACCGGATAGACACCGGCCAGCAACAAAGGCAGCGAAAGTc < 2:81657/147‑1 (MQ=255) gA‑GCGGGC‑TTTTTTTGCGCCATAGAAAAGTGAATTATGGGTACCACCATAACATTTATGAGCAAACCCATTGACACAAAATATGAGCATACTCATACTCGCTCCATCACCGGATAGACACCGGCCAGCAACAAAGGCAGCGAAAGTc < 1:94001/147‑1 (MQ=255) | CCAGGAAGACTGGGGCGCGCTCGTCGAGGCCATGGAAGGCACCGAGGGCGTAAGCCTGGCCTTTGAAGATGATGGCGGCGTTCGTGTGACCTGGGAAAAGCCGCTAGAAGACTGATTTCGACAAACCCACCTTGCCCGCCTCGA‑GCGGGC‑TTTTTTTGCGCCATAGAAAAGTGAATTATGGGTACCACCATAACATTTATGAGCAAACCCATTGACACAAAATATGAGCATACTCATACTCGCTCCATCACCGGATAGACACCGGCCAGCAACAAAGGCAGCGAAAGTC > NC_002947/4415944‑4416232 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |