New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 404617	64 (1.310)	4 (0.090)	4/248	NT	6.5%	coding (1440/2691 nt)	PP_0337	sensory box protein
	?	NC_002947	= 404657	54 (1.170)					coding (1400/2691 nt)	PP_0337	sensory box protein

GCAAACGCCTGGCCAGGCTGATCAGCAGCTTGTCGCCGGTCTGGTGGCCAAGGCTGTCGTTGATGCGCTTGAAGTTGTCGATGTCCACCAGCAGCAGGCACATCGAGCTTTCGCCATCGCGGGCGAAGCGTTCGTCCAGGCTGCGGATGAACGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/404463‑404617 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gaacgccTGGCTTACACCGACAACCTCACCAACCTGGGCAACCGCCCGGCGTTCATCCGCAGCCTGGACGAACGCTTCGCCCGCGATGGCGAAAGCTCGATGTGCCTGCTGCTGGTGGACATCGACAACTTCAAGCGCATCAACGACAGCCTTGG  <  NC_002947/404657‑404510                                                                                                                                                                                                                                                                                                                 GCAAACGCCTGGCCAGGCTGATCAGCAGCTTGTCGCCGGTCTGGTGGCCAAGGCTGTCGTTGATGCGCTTGAAGTTGTCGATGTCCACCAGCAGCAGGCACATCGAGCTTTCGCCATCGCGGGCGAAGCGTTCGTCCAGGCTGCGGATG                                                                                                                                                            >  6:254270/1‑149                                                                                GATGTCCACCAGCAGCAGGCACATCGAGCTTTCGCCATCGCGGGCGAAGCGTTCGTCCAGGCTGCGGATGAACGCCTGGCTTACACCGACAACCTCACCAACCTGGGCAACCGCCCGGCGTTCAT                                                                                                     >  1:264762/1‑125                                                                                GATGTCCACCAGCAGCAGGCACATCGAGCTTTCGCCATCGCGGGCGAAGCGTTCGTCCAGGCTGCGGATGAACGCCTGGCTTACACCGACAACCTCACCAACCTGGGCAACCGCCCGGCGTTCAT                                                                                                     <  2:264762/125‑1                                                                                       ACCAGCAGCAGGCACATCGAGCTTTCGCCATCGCGGGCGAAGCGTTCGTCCAGGCTGCGGATGAACGCCTGGCTTACACCGACAACCTCACCAACCTGGGCAACCGCCCGGCGTTC                                                                                                       >  5:180799/1‑116                                                                                       ACCAGCAGCAGGCACATCGAGCTTTCGCCATCGCGGGCGAAGCGTTCGTCCAGGCTGCGGATGAACGCCTGGCTTACACCGACAACCTCACCAACCTGGGCAACCGCCCGGCGTTC                                                                                                       <  6:180799/116‑1                                                                                                                                                      AACTCCTGGCTTACACCGACAACCTCCCCAACCTGCGCAACCGCCCGGCGTTCATCCGCAGCCTGGACGAACGCTTCGCCCGCGATGGCGAAAGCTCGATGTGCCTGCTGCTGGTGGACATCGACAACTTCAAGCGCATCAACGACAGC       <  8:120581/149‑1                                                                                                                                                          CCTGGCTTACACCGACAACCTCACCAACCTGGGCAACCGCCCGGCGTTCATCCGCAGCCTGGACGAACGCTTCGCCCGCGATGGCGAAAGCTCGATGTGCCTGCTGCTGGTGGACATCGACAACTTCAAGCGCATCAACGACAGCCTTG   >  2:71889/1‑149                                                                                                                                                           CTGGCTTACACCGACAACCTCACCAACCTGGGCAACCGCCCGGCGTTCATCCGCAGCCTGGACGAACGCTTCGCCCGCGATGGCGAAAGCTCGATGTGCCTGCTGCTGGTGGACATCGACAACTTCAAGCGCATCAACGACAGCCTTGG  >  2:177677/1‑149                                                                                                                                                                                                                                                                                                                 GCAAACGCCTGGCCAGGCTGATCAGCAGCTTGTCGCCGGTCTGGTGGCCAAGGCTGTCGTTGATGCGCTTGAAGTTGTCGATGTCCACCAGCAGCAGGCACATCGAGCTTTCGCCATCGCGGGCGAAGCGTTCGTCCAGGCTGCGGATGAACGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/404463‑404617 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gaacgccTGGCTTACACCGACAACCTCACCAACCTGGGCAACCGCCCGGCGTTCATCCGCAGCCTGGACGAACGCTTCGCCCGCGATGGCGAAAGCTCGATGTGCCTGCTGCTGGTGGACATCGACAACTTCAAGCGCATCAACGACAGCCTTGG  <  NC_002947/404657‑404510

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.