New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	405087 =	55 (1.120)	3 (0.070)	3/246	NT	5.8%	coding (970/2691 nt)	PP_0337	sensory box protein
	?	NC_002947	405143 =	45 (0.980)					coding (914/2691 nt)	PP_0337	sensory box protein

CGCCCTGGCGCAAAGCATGCGCCCGGAAAACAAGGCCATGCTCGACGCCAGCATCCGTGTCGATGGCCAGGTGATCGGCGTGTTGTGCCTGGAGCAAAGCGGCCAGCCAAGGGCCTGGCAGTCGGACGAGATTGCCTTTGCCGGTGAGCTGGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/405241‑405087 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctggccgCTTTGCTCCAGGCACAACACGCCGATCACCTGGCCATCGACACGGATGCTGGCGTCGAGCATGGCCTTGTTTTCCGGGCGCATGCTTTGCGCCAG‑GGCGCGGGTGCGCGGGTCGTGGCCGGCGTTGTGAGCGTCGATGGCGCGGCTT  >  NC_002947/405143‑405289                                                                                                                                                                                                                                                                                                                 CGCCCTGGCGCAAAGCATGCGCCCGGAAAACAAGGCCATGCTCGACGCCAGCATCCGTGTCGATGGCCAGGTGATCGGCGTGTTGTGCCTGGAGCAAAGCGGCCAGCCAAGGGCCTGGCAGTCGGACGAGATTGCCTTTGCCGGTGAGC                                                                                                                                                            <  3:267915/149‑1   CCCTGGCGCAAAGCATGCGCCCGGAAAACAAGGCCATGCTCGACGCCAGCATCCGTGTCGATGGCCAGGTGATCGGCGTGTTGTGCCTGGAGCAAAGCGGCCAGCCAAGGGCCTGGCAGTCGGACGAGATTGCCTTTGCCGGTGAGCTG                                                                                                                                                          <  2:10344/149‑1     CTGGCGCAAAGCATGCGCCCGGAAAACAAGGCCATGCTCGACGCCAGCATCCGTGTCGATGGCCAGGTGATCGGCGTGTTGTGCCTGGAGCAAAGCGGCCAGCCAAGGGCCTGGCAGTCGGACGAGATTGCCTTTGCCGGTGAGCTGGC                                                                                                                                                        <  3:129607/149‑1                                                                                              GCAAAGCGGCCAGCCAAGGGCCTGGCAGTCGGACGAGATAGCGTTTGCCGGTGAGCTGGCCGCTTTGCTCCAGGCACAACACGACGATCACCTGGCCATCGACACGGATGCTGGCGTCGAGCATGGCCTTGATTTCCGGGCGCATCCTT                                                               >  2:124843/1‑149                                                                                                   GCGGCCAGCCAAGGGCCTGGCAGTCGGACGAGATTGCCTTTGCCGGTGAGCTGGCCGCTTTGCTCCAGGCACAACACGCCGATCACCTGGCCATCGACACGGATGCTGGCGTCGAGCATGGCCTTGTTTTCCGGGCGCATGCTTTGCGC                                                          >  7:61239/1‑149                                                                                                       CCAGCCAAGGGCCTGGCAGTCGGACGAGATTGCCTTTGCCGGTGAGCTGGCCGCTTTGCTCCAGGCACAACACGCCGATCTCCTGGCCATGGACACGGATGCTGGCGTCGAGCATGGCCTTGTTTTCCGGGCTCATGCTTTGCGCCAG‑G                                                     <  1:124843/149‑1                                                                                                                                                    GCTGGCCGCTTTGCTCCAGGCACAACACGCCGATCACCTGGCCATCGACACGGATGCTGGCGTCGAGCATGGCCTTGTTTTCCGGGCGCATGCTTTGCGCCAG‑GGCGCGGGTGCGCGGGTCGTGGCCGGCGTTGTGAGCGTCGATGGCG        <  4:129607/149‑1                                                                                                                                                          CGCTTTGCTCCAGGCACAACACGCCGATCACCTGGCCATCGACACGGATGCTGGCGTCGAGCATGGCCTTGTTTTCCGGGCGCATGCTTTGCGCCAGAGGCGCGGGTGCGCGGGTCGTGGCCGGCGTTGTGA                    <  1:197446/132‑1                                                                                                                                                          CGCTTTGCTCCAGGCACAACACGCCGATCACCTGGCCATCGACACGGATGCTGGCGTCGAGCATGGCCTTGTTTTCCGGGCGCATGCTTTGCGCCAG‑GGCGCGGGTGCGCGGGTCGTGGCCGGCGTTGTGAGCGTCGATGGCGCGGCTT  >  4:111257/1‑149                                                                                                                                                          CGCTTTGCTCCAGGCACAACACGCCGATCACCTGGCCATCGACACGGATGCTGGCGTCGAGCATGGCCTTGTTTTCCGGGCGCATGCTTTGCGCCAG‑GGCGCGGGTGCGCGGGTCGTGGCCGGCGTTGTGA                    >  2:197446/1‑131                                                                                                                                                          CGCTTTGCTCCAGGCACAACACGCCGATCACCTGGCCATCGACACGGATGCTGGCGTCGAGCATGGCCTTGTTTTCCGGGCGCATGCTTTGCGCCAG‑GGCGCGGGTGCGCGGGTCGTGGCC                              >  5:216234/1‑121                                                                                                                                                          CGCTTTGCTCCAGGCACAACACGCCGATCACCTGGCCATCGACACGGATGCTGGCGTCGAGCATGGCCTTGTTTTCCGGGCGCATGCTTTGCGCCAG‑GGCGCGGGTGCGCGGGTCGTGGCC                              <  6:216234/121‑1                                                                                                                                                                                                                                                                                                                 CGCCCTGGCGCAAAGCATGCGCCCGGAAAACAAGGCCATGCTCGACGCCAGCATCCGTGTCGATGGCCAGGTGATCGGCGTGTTGTGCCTGGAGCAAAGCGGCCAGCCAAGGGCCTGGCAGTCGGACGAGATTGCCTTTGCCGGTGAGCTGGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/405241‑405087 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctggccgCTTTGCTCCAGGCACAACACGCCGATCACCTGGCCATCGACACGGATGCTGGCGTCGAGCATGGCCTTGTTTTCCGGGCGCATGCTTTGCGCCAG‑GGCGCGGGTGCGCGGGTCGTGGCCGGCGTTGTGAGCGTCGATGGCGCGGCTT  >  NC_002947/405143‑405289

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.