New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 663244	56 (1.140)	3 (0.060)	3/248	NT	5.1%	coding (110/4902 nt)	yfhM	lipoprotein
	?	NC_002947	= 663347	59 (1.270)					coding (213/4902 nt)	yfhM	lipoprotein

TAGTTGCTGCCCTCACGTACACGCTGCCCAAGAGTTCCTATCTCATGTTCAACAAAGGATTGTTGCTGGCCTGCGCGCTGGCGTTGCTCAGTGCCTGTGACTCTTCCACGCCGGGTAAACCAGCACCGGTCGAGAAGTCTATGACACCCGCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/663091‑663244 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgcgccATCGAGCTGCACTTCCGATACGTCCAGCACCGTGAGTTCGCGGCCCTCGTAGCGCTTGGCGAGCATGGCCGGGTCCTCACGCTTGGGGGCGGAGGCTTCGGCGGGCGCGGGTGTCATAGACTTCTCGACCGGTGCTGGTTTACC  <  NC_002947/663347‑663204                                                                                                                                                                                                                                                                                                            TAGTTGCTGCCCTCACGTACACGCTGCCCAAGAGTTCCTATCTCATGTTCAACAAAGGATTGTTGCTGGCCTGCGCGCTGGCGTTGCTCAGTGCCTGTGACTCTTCCACGCCGGGTAAACCAGCACCGGTCGAGAAGTCTATGACACCC                                                                                                                                                       >  2:41278/1‑149                                                    ACAAAGGATTGTTGCTGGCCTGCGCGCTGGCGTTGCTCAGTGCCTGTGACTCTTCCACGCCGGGTAAACCAGCACCGGTCGAGAAGTCTATGACACCCGCGCCATCGAGCTGCACTTCCGATACGTCCAGCACCGTGAGTTCGCGGCCC                                                                                                    >  5:11888/1‑149                                                                        TGCGCGCTGGCGTTGCTCAGTGCCTGTGACTCTTCCACGCCGGGTAAACCAGCACCGGTCGAGAAGTCTATGACACCCGCGCCATCGAGCTGCACTTCCGATACGTCCAGCAACGTGAGTTCGCGGCCCTCGAAGCGCTTGGCTAGCAT                                                                                >  3:202443/1‑149                                                                                                                    TAAACCAGCACCGGTCGAGAAGTCTATGACACCCGCGCCATCGAGCTGCACTTCCGATACGTCCAGCACCGTGAGTTCGCGGCCCTCGTAGCGCTTGGCGAGCATGGCCGGGTCCTCACGCTTGGGGGCGGAGGCTTCGGCGGGCGCGG                                    <  6:11888/149‑1                                                                                                                                                    CCGCGCCATCGAGCTGCACTTCCGATACGTCCAGCACCGTGAGTTCGCGGCCCTCGTAGCGCTTGGCGAGCATGGCCGGGTCCTCACGCTTGGGGGCGGAGGCTTCGGCGGGCGCGGGTGTCATAGACTTCTCGACCGGTGCTGGTTTA    >  7:139119/1‑149                                                                                                                                                     CGCGCCATCGAGCTGCACTTCCGATACGTCCAGCACCGTGAGTTCGCGGCCCTCGTAGCGCTTGGCGAGCATGGCCGGGTCCTCACGCTTGGGGGCGGAGGCTTCGGCGGGCGCGGGTGTCATAGACTTCTCGACCGGTGCTGGTTTAC   <  7:4839/149‑1                                                                                                                                                      GCGCCATCGAGCTGCACTTCCGATACGTCCAGCACCGTGAGTTCGCGGCCCTCGTAGCGCTTGGCGAGCATGGCCGGGTCCTCACGCTTGGGGGCGGAGGCTTCGGCGGGCGCGGGTGTCATAGACTTCTCGACCGGTGCTGGTTTACC  >  1:250360/1‑149                                                                                                                                                      GCGCCATCGAGCTGCACTTCCGATACGTCCAGCACCGTGAGTTCGCGGCCCTCGTAGCGCTTGGCGAGCATGGCCGGGTCCTCACGCTTGGGGGCGGAGGCTTCGGCGGGCGCGGGTGTCATAGACTTCTCGACCGGTGCTGGTTTACC  >  1:300272/1‑149                                                                                                                                                                                                                                                                                                            TAGTTGCTGCCCTCACGTACACGCTGCCCAAGAGTTCCTATCTCATGTTCAACAAAGGATTGTTGCTGGCCTGCGCGCTGGCGTTGCTCAGTGCCTGTGACTCTTCCACGCCGGGTAAACCAGCACCGGTCGAGAAGTCTATGACACCCGCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/663091‑663244 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgcgccATCGAGCTGCACTTCCGATACGTCCAGCACCGTGAGTTCGCGGCCCTCGTAGCGCTTGGCGAGCATGGCCGGGTCCTCACGCTTGGGGGCGGAGGCTTCGGCGGGCGCGGGTGTCATAGACTTCTCGACCGGTGCTGGTTTACC  <  NC_002947/663347‑663204

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.