New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 678896 = | 56 (1.140) | 4 (0.090) | 4/246 | NT | 6.6% | coding (122/1374 nt) | PP_0581 | 3‑oxoacyl‑ACP reductase |
? | NC_002947 | 678933 = | 61 (1.330) | coding (85/1374 nt) | PP_0581 | 3‑oxoacyl‑ACP reductase |
CCCTGCCGCAAAGTTGGTCCACACTTTCAAGCTTGCCTTTCGGGAGACCCCTCATGAGCGATCGCTACCTCGGTTTTGCCAACTCCAATCTCGGCCGCCGCCTCGTGGATGCCCTTGGCCTGCCA‑CGC‑CCGGCGCCACTGGAGCGCTGGCAGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/679049‑678896 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggcaggcCAAGGGCATCCACGAGGCGGCGGCCGAGATTGGAGTTGGCAAAACCGAGGTAGCGATCGCTCATGAGGGGTCTCCCGAAAGGCAAGCTTGAAAGTGTGGACCAACTTTGCGGCAGGGTCGTTCGAATGCGGTAAAAACACCTAGG > NC_002947/678933‑679077 CCCTGCCGCAAAGTTGGTCCACACTTTCAAGCTTGCCTTTCGGGAGACCCCTCATGAGCGATCGCTACCTCGGTGTTGCCAACTCCAATCTCGGCCGCCGCCTCGTGGATGCCCTTGGCCTGCCA‑CGC‑CCGGCGCCACTGGAGCGCTGG < 5:159061/149‑1 CCTGCCGCAAAGTTGGTCCACACTTTCAAGCTTGCCTTTCGGGAGACCCCTCATGAGCGATCGCTACCTCGGTTTTGCCAACTCCAATCTCGGCCGCCGCCTCGTGGATGCCCTTGGCCTGCCA‑CGC‑CCGGCGCCACTGGAGCGCTGG > 8:105763/1‑148 CCGGAAAGTTGGTCCACACTTTCAAGCTTGCCTTTCGGGAGACCGCTCATGAGCGATCGCTACCTCGGTTTTGCCAACTCCAATCTCGGCCGGCGCCTCGTGGATGCCCTTGGCCTGCGA‑CGC‑CCGGCGCCTCTGGAGCGCTGGCAGG < 7:209287/148‑1 CGCAAAGTTGGTCCACACTTTCAAGCTTGCCTTTCGGGAGACCCCTCATGAGCGATCGCTACCTCGGTTTTGCCAACTCCAATCTCGGCCGCCGCCTCGTGGATGCCCTTGGCCTGCCA‑CGC‑CCGGCGCCACTGGAGCGCTGGCA < 3:153856/145‑1 CGCAAAGTTGGTCCACACTTTCAAGCTTGCCTTTCGGGAGACCCCTCATGAGCGATCGCTACCTCGGTTTTGCCAACTCCAATCTCGGCCGCCGCCTCGTGGATGCCCTTGGCCTGCCA‑CGC‑CCGGCGCCACTGGAGCGCTGGCA > 4:153856/1‑145 ACACTTTCAAGCTTGCCTTTCGGGAGACCCCTCATGAGCGATCGCTACCTCGGTTTTGCCAACTCCAATCTCGGCCGCCGCCTCGTGGATGCCCTTGGCCTGCCAGCGCTCCAGTGGCGCCGG‑GCG‑TGGCAGGCCAAGGGCATCCACGA < 8:293055/149‑1 GAGCGATCGCTACCTCGGTTTTGCCAACTCCAATCTCGGCCGCCGCCTCGTGGATGCCCTTGGCCTGCCA‑CGC‑CCGGCGCCACTGGAGCGCTGGC > 5:248234/1‑95 GAGCGATCGCTACCTCGGTTTTGCCAACTCCAATCTCGGCCGCCGCCTCGTGGATGCCCTTGGCCTGCCA‑CGC‑CCGGCGCCACTGGAGCGCTGGC < 6:248234/95‑1 GCCTGCCA‑CGC‑CCGGCGCCACTGGAGCGCTGACAGGCCAAGGGCATCCACGAGGCGGCGGCCGAGATTGGAGTTGACAAAACCGAGGTAGCGATCGCTCATGAGGGGTCTCCCGAAAGGCAAGC < 3:110543/124‑1 GCCTGCCA‑CGC‑CCGGCGCCACTGGAGCGCTGACAGGCCAAGGGCATCCACGAGGCGGCGGCCGAGATTGGAGTTGACAAAACCGAGGTAGCGATCGCTCATGAGGGGTCTCCCGAAAGGCAAGC > 4:110543/1‑124 GCGCCACTGGAGCGCTGGCAGGCCAAGGGCATCCACGAGGCGGCGGCCGAGATTGGAGTTGGCAAAACCGAGGTAGCGATCGCTCATGAGGGGTCTCCCGAAAGGCAAGCTTGAAAGTGTGGACCAACTTTGCGGCAGGGTCGTTCGAA < 7:293055/149‑1 GCAGGCCAAGGGCATCCACGAGGCGGCGGCCGAGATTGGAGTTGGCAAAACCGAGGTAGCGATCGCTCATGAGGGGTCTCCCGAAAGGCAAGCTTGAAAGTGTGGACCAACTTTGCGGCAGGGTCGTTCGAATGCGGTAAAAACACCTA < 2:190310/149‑1 GCAGGCCAAGGGCATCCACGAGGCGGCGGCCGAGATTGGAGTTGGCAAAACCGAGGTAGCGATCGCTCATGAGGGGTCTCCCGAAAGGCAAGCTTGAAAGTGTGGACCAACTTTGCGGCAGGGTCGTTCGAATGCGGTAAAAACACC > 5:188055/1‑147 GCAGGCCAAGGGCATCCACGAGGCGGCGGCCGAGATTGGAGTTGGCAAAACCGAGGTAGCGATCGCTCATGAGGGGTCTCCCGAAAGGCAAGCTTGAAAGTGTGGACCAACTTTGCGGCAGGGTCGTTCGAATGCGGTAAAAACACC > 6:236483/1‑147 AGGCCAAGGGCATCCACGAGGCGGCGGCCGAGATTGGAGTTGGCAAAACCGAGGTAGCGATCGCTCATGAGGGGTCTCCCGAAAGGCAAGCTTGAAAGTGTGGACCAACTTTGCGGCAGGGTCGTTCGAATGCGGTAAAAACACCTAGG < 3:212828/149‑1 CCCTGCCGCAAAGTTGGTCCACACTTTCAAGCTTGCCTTTCGGGAGACCCCTCATGAGCGATCGCTACCTCGGTTTTGCCAACTCCAATCTCGGCCGCCGCCTCGTGGATGCCCTTGGCCTGCCA‑CGC‑CCGGCGCCACTGGAGCGCTGGCAGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/679049‑678896 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggcaggcCAAGGGCATCCACGAGGCGGCGGCCGAGATTGGAGTTGGCAAAACCGAGGTAGCGATCGCTCATGAGGGGTCTCCCGAAAGGCAAGCTTGAAAGTGTGGACCAACTTTGCGGCAGGGTCGTTCGAATGCGGTAAAAACACCTAGG > NC_002947/678933‑679077 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |