New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 678896 =56 (1.140)4 (0.090) 4/246 NT 6.6% coding (122/1374 nt) PP_0581 3‑oxoacyl‑ACP reductase
?NC_002947 678933 = 61 (1.330)coding (85/1374 nt) PP_0581 3‑oxoacyl‑ACP reductase

CCCTGCCGCAAAGTTGGTCCACACTTTCAAGCTTGCCTTTCGGGAGACCCCTCATGAGCGATCGCTACCTCGGTTTTGCCAACTCCAATCTCGGCCGCCGCCTCGTGGATGCCCTTGGCCTGCCACGCCCGGCGCCACTGGAGCGCTGGCAGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/679049‑678896
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggcaggcCAAGGGCATCCACGAGGCGGCGGCCGAGATTGGAGTTGGCAAAACCGAGGTAGCGATCGCTCATGAGGGGTCTCCCGAAAGGCAAGCTTGAAAGTGTGGACCAACTTTGCGGCAGGGTCGTTCGAATGCGGTAAAAACACCTAGG  >  NC_002947/678933‑679077
                                                                                                                                                                                                                                                                                                             
CCCTGCCGCAAAGTTGGTCCACACTTTCAAGCTTGCCTTTCGGGAGACCCCTCATGAGCGATCGCTACCTCGGTGTTGCCAACTCCAATCTCGGCCGCCGCCTCGTGGATGCCCTTGGCCTGCCACGCCCGGCGCCACTGGAGCGCTGG                                                                                                                                                        <  5:159061/149‑1
 CCTGCCGCAAAGTTGGTCCACACTTTCAAGCTTGCCTTTCGGGAGACCCCTCATGAGCGATCGCTACCTCGGTTTTGCCAACTCCAATCTCGGCCGCCGCCTCGTGGATGCCCTTGGCCTGCCACGCCCGGCGCCACTGGAGCGCTGG                                                                                                                                                        >  8:105763/1‑148
     CCGGAAAGTTGGTCCACACTTTCAAGCTTGCCTTTCGGGAGACCGCTCATGAGCGATCGCTACCTCGGTTTTGCCAACTCCAATCTCGGCCGGCGCCTCGTGGATGCCCTTGGCCTGCGACGCCCGGCGCCTCTGGAGCGCTGGCAGG                                                                                                                                                    <  7:209287/148‑1
      CGCAAAGTTGGTCCACACTTTCAAGCTTGCCTTTCGGGAGACCCCTCATGAGCGATCGCTACCTCGGTTTTGCCAACTCCAATCTCGGCCGCCGCCTCGTGGATGCCCTTGGCCTGCCACGCCCGGCGCCACTGGAGCGCTGGCA                                                                                                                                                      <  3:153856/145‑1
      CGCAAAGTTGGTCCACACTTTCAAGCTTGCCTTTCGGGAGACCCCTCATGAGCGATCGCTACCTCGGTTTTGCCAACTCCAATCTCGGCCGCCGCCTCGTGGATGCCCTTGGCCTGCCACGCCCGGCGCCACTGGAGCGCTGGCA                                                                                                                                                      >  4:153856/1‑145
                    ACACTTTCAAGCTTGCCTTTCGGGAGACCCCTCATGAGCGATCGCTACCTCGGTTTTGCCAACTCCAATCTCGGCCGCCGCCTCGTGGATGCCCTTGGCCTGCCAGCGCTCCAGTGGCGCCGGGCGTGGCAGGCCAAGGGCATCCACGA                                                                                                                                    <  8:293055/149‑1
                                                       GAGCGATCGCTACCTCGGTTTTGCCAACTCCAATCTCGGCCGCCGCCTCGTGGATGCCCTTGGCCTGCCACGCCCGGCGCCACTGGAGCGCTGGC                                                                                                                                                       >  5:248234/1‑95
                                                       GAGCGATCGCTACCTCGGTTTTGCCAACTCCAATCTCGGCCGCCGCCTCGTGGATGCCCTTGGCCTGCCACGCCCGGCGCCACTGGAGCGCTGGC                                                                                                                                                       <  6:248234/95‑1
                                                                                                                     GCCTGCCACGCCCGGCGCCACTGGAGCGCTGACAGGCCAAGGGCATCCACGAGGCGGCGGCCGAGATTGGAGTTGACAAAACCGAGGTAGCGATCGCTCATGAGGGGTCTCCCGAAAGGCAAGC                                                            <  3:110543/124‑1
                                                                                                                     GCCTGCCACGCCCGGCGCCACTGGAGCGCTGACAGGCCAAGGGCATCCACGAGGCGGCGGCCGAGATTGGAGTTGACAAAACCGAGGTAGCGATCGCTCATGAGGGGTCTCCCGAAAGGCAAGC                                                            >  4:110543/1‑124
                                                                                                                                     GCGCCACTGGAGCGCTGGCAGGCCAAGGGCATCCACGAGGCGGCGGCCGAGATTGGAGTTGGCAAAACCGAGGTAGCGATCGCTCATGAGGGGTCTCCCGAAAGGCAAGCTTGAAAGTGTGGACCAACTTTGCGGCAGGGTCGTTCGAA                     <  7:293055/149‑1
                                                                                                                                                      GCAGGCCAAGGGCATCCACGAGGCGGCGGCCGAGATTGGAGTTGGCAAAACCGAGGTAGCGATCGCTCATGAGGGGTCTCCCGAAAGGCAAGCTTGAAAGTGTGGACCAACTTTGCGGCAGGGTCGTTCGAATGCGGTAAAAACACCTA    <  2:190310/149‑1
                                                                                                                                                      GCAGGCCAAGGGCATCCACGAGGCGGCGGCCGAGATTGGAGTTGGCAAAACCGAGGTAGCGATCGCTCATGAGGGGTCTCCCGAAAGGCAAGCTTGAAAGTGTGGACCAACTTTGCGGCAGGGTCGTTCGAATGCGGTAAAAACACC      >  5:188055/1‑147
                                                                                                                                                      GCAGGCCAAGGGCATCCACGAGGCGGCGGCCGAGATTGGAGTTGGCAAAACCGAGGTAGCGATCGCTCATGAGGGGTCTCCCGAAAGGCAAGCTTGAAAGTGTGGACCAACTTTGCGGCAGGGTCGTTCGAATGCGGTAAAAACACC      >  6:236483/1‑147
                                                                                                                                                        AGGCCAAGGGCATCCACGAGGCGGCGGCCGAGATTGGAGTTGGCAAAACCGAGGTAGCGATCGCTCATGAGGGGTCTCCCGAAAGGCAAGCTTGAAAGTGTGGACCAACTTTGCGGCAGGGTCGTTCGAATGCGGTAAAAACACCTAGG  <  3:212828/149‑1
                                                                                                                                                                                                                                                                                                             
CCCTGCCGCAAAGTTGGTCCACACTTTCAAGCTTGCCTTTCGGGAGACCCCTCATGAGCGATCGCTACCTCGGTTTTGCCAACTCCAATCTCGGCCGCCGCCTCGTGGATGCCCTTGGCCTGCCACGCCCGGCGCCACTGGAGCGCTGGCAGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/679049‑678896
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggcaggcCAAGGGCATCCACGAGGCGGCGGCCGAGATTGGAGTTGGCAAAACCGAGGTAGCGATCGCTCATGAGGGGTCTCCCGAAAGGCAAGCTTGAAAGTGTGGACCAACTTTGCGGCAGGGTCGTTCGAATGCGGTAAAAACACCTAGG  >  NC_002947/678933‑679077

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.