New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 824759 = | 57 (1.170) | 4 (0.090) | 4/250 | NT | 6.6% | coding (1358/1500 nt) | PP_0709 | NCS1 family transporter |
? | NC_002947 | 824799 = | 58 (1.240) | coding (1318/1500 nt) | PP_0709 | NCS1 family transporter |
GCCACTACTGGTTCCTGCACGGCTGGAACTGGCGCGGCATGGGGGCGTGGATCCCCAGCGCGGCGGTTGGCCTGTGCTTCGTCAACCTGCCGGGGCAGTTCGTCGGCCCACTGGGTGACCTGGCGGGCGGCATCGACCTGAGCCTGCC‑GGTCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/824912‑824759 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtcacCCAGTGGGCCGACGAACTGCCCCGGCAGGTTGACGAAGCACAGGCCAACCGCCGCGCTGGGGATCCACGCCCCCATGCCGCGCCAGTTCCAGCCGTGCAGGAACCAGTAGTGGCCACCACGCTGGCCGCGGGTGAATACCTGC > NC_002947/824799‑824941 GCCACTACTGGTTCCTGCACGGCTGGAACTGGCGCGGCATGGGGGCGTGGATCCCCAGCGCGGCGGTTGGCCTGTGCTTCGTCAACCTGCCGGGGCAGTTCGTCGGCCCACTGGGTGACCTGGCGGGCGGCATCGACCTGAGCCTGCC‑G < 8:133998/149‑1 CACTACTGGTTCCTGCACGGCTGGAACTGGCGCGGCATGGGGGCGTGGATCCCCAGCGCGGCGGTTGGCCTGTGCTTCGTCAACCTGCCGGGGCAGTTCGTCGGCCCACTGGGTGACCTGGCGGGCGGCATCGACCTGAGCCTGCC‑GGT > 2:114990/1‑149 CACTACTGGTTCCTGCACGGCTGGAACTGGCGCGGCATGGGGGCGTGGATCCCCAGCGCGGCGGTTGGCCTGTGCTTCGTCAACCTGCCGGGGCAGTTCGTCGGCCCACTGGGTGACCTGGCGGGCGGCATCGACCTGAGCCTGCC‑GGT > 2:212319/1‑149 CACTACTGGTTCCTGCACGGCTGGAACTGGCGCGGCATGGGGGCGTGGATCCCCAGCGCGGCGGTTGGCCTGTGCTTCGTCAACCTGCCGGGGCAGTTCGTCGGCCCACTGGGTGACCTGGCGGGCGGCATCGACCTGAGCCTGCC‑GGT < 4:199777/149‑1 CACTACTGGTTCCTGCACGGCTGGAACTGGCGCGGCATGGGGGCGTGGATCCCCAGCGCGGCGGTTGGCCTGTGCTTCGTCAACCTGCCGGGGCAGTTCGTCGGCCCACTGGGTGACCTGGCGGGCGGCATCGACCTGAGCCTGCC‑GGT > 7:200981/1‑149 TACTGGTTCCTGCACGGCTGGAACTGGCGCGGCATGGGGGCGTGGATCCCCAGCGCGGCGGTTGGCCTGTGCTTCGTCAACCTGCCGGGGCAGTTCGTCGGCCCACTGGGTGACCTGGCGGGCGGTATCGACCTGAGCCTGCC‑GGTCAC > 6:65665/1‑149 TACTGGTTCCTGCACGGCTGGAACTGGCGCGGCATGGGGGCGTGGATCCCCAGCGCGGCGGTTGGCCTGTGCTTCGTCAACCTGCCGGGGCAGTTCGTCGGCCCACTGGGTGACCTGGCGGGCGGCATCGACCTGAGCCTGCC‑GGTCAC > 4:161907/1‑149 GTGACCTGGCGGGCGGCATCGACCTGAGCCTGCC‑GGTCACCCAGTGGGCCGACGAACTGCCCCGGCAGGTTGACGAAGCACAGGCCAACCGCCGCGCTGGGGATCCACGCCCCCATGCCGCGCCAGTTCCAGCCGTGCAGGAACCAG > 2:254277/1‑147 TGACCTGGCGGGCGGCATCGACCTGAGCCTGCC‑GGTCACCCAGTGGGCCGACGAACTGCCCCGGCAGGTTGACGAAGCACAGGCCAACCGCCGCGCTGGGGATCCACGCCCCCATGCCGCGCCAGTTCCAGCCGTGCAGGAACCAGTAG < 1:254277/149‑1 GACCTGGCGGGCGGCATCGACCTGAGCCTGCC‑GGTCACCCAGTGGGCCGACGAACTGCCCCGGCAGGTTGACGAAGCACAGGCCAACCGCCGCGCTGGGGATCCACGCCCCCATGCCGCGCCAGTTCCAGCCGTGCAGGAACCAGTAGT > 8:130205/1‑149 TGGCGGGCGGCATCGACCTGAGCCTGCCAGGTCACCCAGTGGGCCGACGAACTGCCCCGGCAGGTTGACGAAGCACAGGCCAACCGCCGCGCTGGGGATCCACGCCCCCATGCCGCGCCAGTTCCAGCCGTGCAGGAACCAGTAGTGGC > 6:146621/1‑149 GGTCACCCAGTGGGCCGACGAACTGCCCCGGCAGGTTGACGAAGCACAGGCCAACCGCCGCGCTGGGGATCCACGCCCCCATGCCGCGCCAGTTCCAGCCGTGCAGGAACCAGTAGTGGCCACCACGCTGGCCGCGGGTGAATACCTGC < 5:238343/149‑1 GCCACTACTGGTTCCTGCACGGCTGGAACTGGCGCGGCATGGGGGCGTGGATCCCCAGCGCGGCGGTTGGCCTGTGCTTCGTCAACCTGCCGGGGCAGTTCGTCGGCCCACTGGGTGACCTGGCGGGCGGCATCGACCTGAGCCTGCC‑GGTCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/824912‑824759 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtcacCCAGTGGGCCGACGAACTGCCCCGGCAGGTTGACGAAGCACAGGCCAACCGCCGCGCTGGGGATCCACGCCCCCATGCCGCGCCAGTTCCAGCCGTGCAGGAACCAGTAGTGGCCACCACGCTGGCCGCGGGTGAATACCTGC > NC_002947/824799‑824941 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |