| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 892009 = | 51 (1.040) | 4 (0.080) | 4/256 | NT | 6.8% | coding (1706/2088 nt) | pta | phosphate acetyltransferase |
| ? | NC_002947 | 892050 = | 59 (1.230) | coding (1665/2088 nt) | pta | phosphate acetyltransferase | |||||
GTCTCGTCGGTGTTCTTCATGCTGTTCCCCGAGCAGGTGCTGGTGTACGGCGACTGCGTGATGAACCCGCACCCAAGCGCTGCCGAGCTGGCGGAGATTGCCCAACAGAGTGCCGCCTCGGCGCAGGCCTTCGGCATCGCGCCACGGGTGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/892160‑892009‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcACTCTGTTGGGCAATCTCCGCCAGCTCGGCAGCGCTTGGGTGCGGGTTCATCACGCAGTCGCCGTACACCAGCACCTGCTCGGGGAACAGCATGAA > NC_002947/892050‑892145 GTCTCGTCGGTGTTCTTCATGCTGTTCCCCGAGCAGGTGCTGGTGTACGGCGACTGCGTGATGAACCCGCACCCAAGCGCTGCCGAGCTGGCGGAGATTGCCCAACAGAGTGCCGCCTCGGCGCAGGCCTTCGGCATCGCG‑CACGGGTG < 4:175527/149‑1 CTCGTCGGTGTTCTTCATGCTGTTCCCCGAGCAGGTGCTGGTGTACGGCGACTGCGTGATGAACCCGCACCCAAGCGCTGCCGAGCTGGCGGAGATTGCCCAACAGAGTGCCGCCTCGGCGCAGGCCTTCGGCATCGCGCCACGGGTGG < 4:17970/149‑1 CTCGTCGGTGTTCTTCATGCTGTTCCCCGAGCAGGTGCTGGTGTACGGCGACTGCGTGATGAACCCGCACCCAAGCGCTGCCGAGCTGGCGGAGATTGCCCAACAGAGTGCCGCCTCGGCGCAGGCCTTCGGCATCGCGCCACGGGTGG < 5:219925/149‑1 GCCCAACAGAGTGCCGCCTCGGCGCAGGCCTTCGGCATCGCGCCACGGGTGGCACTCTGTTGGGCAATCTCCGCCAGCTCGGCAGCGCTTGGGTGCGGGTTCATCACGCAGTCGCCGTACACCAGCACCTGCTCGGGG > 7:28722/1‑138 GCCCAACAGAGTGCCGCCTCGGCGCAGGCCTTCGGCATCGCGCCACGGGTGGCACTCTGTTGGGCAATCTCCGCCAGCTCGGCAGCGCTTGGGTGCGGGTTCATCACGCAGTCGCCGTACACCAGCACCTGCTCGGGG < 8:28722/138‑1 CCGCCTCGGCGCAGGCCTTCGGCATCGCGCCACGGGTGGCACTCTGTTGGGCAATCTCCGCCAGCTCGGCAGCGCTTGGGTGCGGGTTCATCACGCAGTCGCCGTACACCAGCACCTGCTCGGGGAACAGCATGAA > 5:26497/1‑136 CCGCCTCGGCGCAGGCCTTCGGCATCGCGCCACGGGTGGCACTCTGTTGGGCAATCTCCGCCAGCTCGGCAGCGCTTGGGTGCGGGTTCATCACGCAGTCGCCGTACACCAGCACCTGCTCGGGGAACAGCATGAA < 6:26497/136‑1 GTCTCGTCGGTGTTCTTCATGCTGTTCCCCGAGCAGGTGCTGGTGTACGGCGACTGCGTGATGAACCCGCACCCAAGCGCTGCCGAGCTGGCGGAGATTGCCCAACAGAGTGCCGCCTCGGCGCAGGCCTTCGGCATCGCGCCACGGGTGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/892160‑892009‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcACTCTGTTGGGCAATCTCCGCCAGCTCGGCAGCGCTTGGGTGCGGGTTCATCACGCAGTCGCCGTACACCAGCACCTGCTCGGGGAACAGCATGAA > NC_002947/892050‑892145 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |