New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 94323750 (1.020)4 (0.090) 4/248 NT 7.6% coding (2385/18933 nt) PP_0806 surface adhesion protein
?NC_002947 = 943304 50 (1.080)coding (2318/18933 nt) PP_0806 surface adhesion protein

GGCGGTGTGATATCCGGGGCTGTGAACTCCAGCGGTATCGAACTGTTGCCGGCGGCATCCACCAGACGCACGTCGAGTGCTTCACCATTGGTCTGGGCCGGCGACAGGGTGAGGCTGAACAGGCCGTCGGCCCCGACGACACCAGTACCGATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/943085‑943237
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑accgatgGCATCACCTTCACCGGTCGCGGCGAACCCGGCGCTACAGTGCAGGTACGCGATGCCGGCGGTGCTGTCATCGGTACTGGTGTCGTCGGGGCCGACGGCCTGTTCAGCCTCACCCTGTCGCCGGCCCAGACCAATGGTGAAGCAC  <  NC_002947/943304‑943161
                                                                                                                                                                                                                                                                                                         
GGCGGTGTGATATCCGGGGCTGTGAACTCCAGCGGTATCGAACTGTTGCCGGCGGCATCCACCAGACGCACGTCGAGTGCTTCACCATTGGTCTGGGCCGGCGACAGGGTGAGGCTGCACAGGCCGTCGGCCCCGACGACACCAGTACC                                                                                                                                                      >  3:3914/1‑149
 GCGGTGGTATATCGGGGGCTTTGAACTCCAGCGGTATCGAACTGTTGCCGGCGGCATCCACCAGACGCACGTCGAGTGCTTCACCATTGGTCTGGGCCGGCGACAGGGTGAGGCTGAACAGGCCGTCGGCCCCGACGACACCAGTACCG                                                                                                                                                     <  4:3914/149‑1
   GGTGTGATATCCGGGGCTGTGAACTCCAGCGGTATCGAACTGTTGCCGGCGGCATCCACCAGACGCACGTCGAGTGCTTCACCATTGGTCTGGGCCAGCGACAGGGTGAGGCTGAACAGGCCGTCGGCCCCGACGACACCAGTACCGAT                                                                                                                                                   <  2:3099/149‑1
           ATCCGGGGCTGTGAACTCCAGCGGTATCGAACTGTTGCCGGCGGCATCCACCAGACGCACGTCGAGTGCTTCACCATTGGTCTGGGCCGGCGACAGGGTGAGGCTGAACAGGCCGTCGGCCCCGACGACACCAGTA                                                                                                                                                        <  5:17657/136‑1
           ATCCGGGGCTGTGAACTCCAGCGGTATCGAACTGTTGCCGGCGGCATCCACCAGACGCACGTCGAGTGCTTCACCATTGGTCTGGGCCGGCGACAGGGTGAGGCTGAACAGGACGTCGGCCCCGACGACACCAGTA                                                                                                                                                        >  6:17657/1‑136
                                                        ATCCACCAGACGCACGTCGAGTGCTTCACCATTGGTCTGGGCCGGCGACAGGGTGAGGCTGAACAGGCCGTCGGCCCCGACGACACCAGTACCGATGGCATCACCTTCACCGGTCGCGGCGAACCCGGCGCTACAGTGCAGGTACGCGA                                                                                              >  6:20251/1‑149
                                                                   GCACGTCGAGTGCTTCACCATTGGTCTGGGCCGGCGACAGGGTGAGGCTGAACAGGCCGTCGGCCCCGACGACACCAGTACCGATGGCATCACCTTCACCGGTCGCGGCGAACCCGGCGCTACAGTGCAGGTACGCGATGCCGGCGGTG                                                                                   >  4:120107/1‑149
                                                                            GTGCTTCACCATTGGTCTGGGCCGGCGACAGGGTGAGGCTGAACAGGCCGTCGGCCCCGACGACACCAGTACCGATGGCATCACCTTCACCGGTCGCGGCGAACCCGGCGCTACAGTGCAGGTACGCGATGCCGGCGGTGCTGTCATCG                                                                          <  5:20251/149‑1
                                                                                   ACCATTGGTCTGGGCCGGCGACAGGGTGAGGCTGAACAGGCCGTCGGCCCCGACGACACCAGTACCGATGGCATCACCTTCACCGGTCGCGGCGAACCCGGCGCTACAGTGCAGGTACGCGATGCCGGCGGTGCTGTCATCGGTACTGG                                                                   <  3:120107/149‑1
                                                                                                                                                  ACCGATGGCATCACCTTCACCGGTCGCGGCGAACCCGGCGCTACAGTGCAGGTACGCGATGCCGGCGGTGCTGTCATCGGTACTGGTGTCGTCGGGGCCGACGGCCTGTTCAGCCTCACCCTGTCGCCGGCCCAGACCAATGGTGAAG     <  8:109695/148‑1
                                                                                                                                                  ACCGATGGCATCACCTTCACCGGTCGCGGCGAACCCGGCGCTACAGTGCAGGTACGCGATGCCGGCGGTGCTGTCATCGGTACTGGTGTCGTCGGGGCCGACGGCCTGTTCAGCCTCACCCTGTCGCCGGCCCAGACCAATGGTGAA      <  5:308552/147‑1
                                                                                                                                                    CGATGGCATCACCTTCACCGGTCGCGGCGAACCCGGCGCTACAGTGCAGGTACGCGATGCCGGCGGTGCTGTCATCGGTACTGGTGTCGTCGGGGCCGACGGCCTGTTCAGCCTCACCCTGTCGCCGGCCCAGACCAATGGTGAAGCAC  >  4:179958/1‑149
                                                                                                                                                    CGATGGCATCACCTTCACCGGTCGCGGCGAACCCGGCGCTACAGTGCAGGTACGCGATGCCGGCGGTGCTGTCATCGGTACTGGTGTCGTCGGGGCCGACGGCCTGTTCAGCCTCACCCTGTCGCCGGCCCAGACCAATGGTGAAGCAC  >  8:24972/1‑149
                                                                                                                                                    CGATGGCATCACCTTCACCGGTCGCGGCGAACCCGGCGCTACAGTGCAGGTACGCGATGCCGGCGGTGCTGTCATCGGTACTGGTGTCGTCGGGGCCGACGGCCTGTT                                           >  3:222050/1‑108
                                                                                                                                                    CGATGGCATCACCTTCACCGGTCGCGGCGAACCCGGCGCTACAGTGCAGGTACGCGATGCCGGCGGTGCTGTCATCGGTACTGGTGTCGTCGGGGCCGACGGCCTGTT                                           <  4:222050/108‑1
                                                                                                                                                                                                                                                                                                         
GGCGGTGTGATATCCGGGGCTGTGAACTCCAGCGGTATCGAACTGTTGCCGGCGGCATCCACCAGACGCACGTCGAGTGCTTCACCATTGGTCTGGGCCGGCGACAGGGTGAGGCTGAACAGGCCGTCGGCCCCGACGACACCAGTACCGATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/943085‑943237
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑accgatgGCATCACCTTCACCGGTCGCGGCGAACCCGGCGCTACAGTGCAGGTACGCGATGCCGGCGGTGCTGTCATCGGTACTGGTGTCGTCGGGGCCGACGGCCTGTTCAGCCTCACCCTGTCGCCGGCCCAGACCAATGGTGAAGCAC  <  NC_002947/943304‑943161

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.