| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 961109 = | 62 (1.270) | 4 (0.090) | 4/252 | NT | 6.2% | coding (272/1113 nt) | selU | tRNA 2‑selenouridine synthase |
| ? | NC_002947 | 961154 = | 62 (1.320) | coding (227/1113 nt) | selU | tRNA 2‑selenouridine synthase | |||||
GATGAACGACCAGGAGCGGCAGAAGGTCGGCACCTGCTACAAACAGCAGGGCCAGGCTGCCGCCATCGCCCTGGGCCACCAACTGGTCAGTGGCGCCACCAAGCAAGCCCGTCTGGAGGCCTGGGCAGCGTTTGCCAAGGCGCACCCTGACGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/961261‑961109‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gacggGCTTGCTTGGTGGCGCCACTGACCAGTTGGTGGCCCAGGGCGATGGCGGCAGCCTGGCCCTGCTGTTTGTAGCAGGTGCCGACCTTCTGCCGCTCCTGGTCGTTCATCAGCGGCAGGTTTACCACGCCAGGGAAGGCGCCTTTG > NC_002947/961154‑961297 GATGAACGACCAGGAGCGGCAGAAGGTCGGCACCTGCTACAAACAGCAGGGCCAGGCTGCCGCCATCGCCCTGGGCCACCAACTGGTCAGTGGCGCCACCAAGCAAGCCCGTCTGGAGGCCTGGGCAGCGTTTGCCAAGGCGCACCCTG > 3:210727/1‑149 GAACGACCAGGAGCGGCAGAAGGTCGGCACCTGCTACAAACAGCAGGGCCAGGCTGCCGCCATCGCCCTGGGCCACCAACTGGTCAGTGGCGCCACCAAGCAAGCCCGTCTGGAGGCCTGGGCAGCGTTTGCCAAGGCGCACCCTGAC > 5:143839/1‑148 GAACGACCAGGAGCGGCAGAAGGTCGGCACCTGCTACAAACAGCAGGGCCAGGCTGCCGCCATCGCCCTGGGCCACCAACTGGTCAGTGGCGCCACCAAGCAAGCCCGTCTGGAGGCCTGGGCAGCGTTTGCCAAGGCGCACCCTGAC < 6:143839/148‑1 AACGACCAGGAGCGGCAGAAGGTCGGCACCTGCTACAAACAGCAGGGCCAGGCTGCCGCCATCGCCCTGGGCCACCAACTGGTCAGTGGCGCCACCAAGCAAGCCCGTCTGGAGGCCTGGGCAGCGTTTGCCAAGGCGCACCCTGACGG < 4:148860/149‑1 CGACCAGGAGCGACAGAAGGTCGGCACCTGCTACAAACAGCAGGGCCAGGCTGCCGCCATCGCCCTGGGCCACCAACTGGTCAGTGGCGCCACCAAGCAAGCCCGTCTGGAGGCCTGGGCAGCGTTTGCCAAGGCGCACCCTGACGG < 5:98637/147‑1 CGACCAGGAGCGACAGAAGGTCGGCACCTGCTACAAACAGCAGGGCCAGGCTGCCGCCATCGCCCTGGGCCACCAACTGGTCAGTGGCGCCACCAAGCAAGCCCGTCTGGAGGCCTGGGCAGCGTTTGCCAAGGCGCACCCTGACGG > 6:98637/1‑147 CCAACTGGTCAGTGGCGCCACCAAGCAAGCCCGTCTGGAGGCCTGGGCAGCGTTTGCCAAGGCGCACCCTGA < 2:298460/72‑1 CAAGCAAGCCCGTCTGGAGGCCTGGGCAGCGTTTGCCAAGGCGCACCCTGACGGGCTTGCTTGGTGGCGCCACTGACCAGTTGGTGGCCCAGGGCGATGGCGGCAGCCTGGCCCTGCTGTTTGTAGCAGGTGCCGACCTTCTGCCGCTC > 4:248806/1‑149 AGCCCGTCTGGAGGCCTGGGCAGCGTTTGCCAAGGCGCACCCTGACGGGCTTGCTTGGTGGCGCCACTGACCAGTTGGTGGCCCAGGGCGATGGCGGCAGCCTGGCCCTGCTGTTTGTAGCAGGTGCC < 7:89993/128‑1 AGCCCGTCTGGAGGCCTGGGCAGCGTTTGCCAAGGCGCACCCTGACGGGCTTGCTTGGTGGCGCCACTGACCAGTTGGTGGCCCAGGGCGATGGCGGCAGCCTGGCCCTGCTGTTTGTAGCAGGTGCC > 8:89993/1‑128 GGCGCACCCTGACGGGCTTGCTTGGTGGCGCCACTGACCAGTTGGTGGCCCAGGGCGATGGCGGCAGCCTGGCCCTGCTGTTTGTAGCAGGTGCCGACCTTCTGCCGCTCCTGGTCGTTCATCAGCGGCAGGTTTACCACGCCAGGGAA < 3:248806/149‑1 GACGGGCTTGCTTGGTGGCGCCACTGACCAGTTGGTGGCCCAGGGCGATGGCGGCAGCCTGGCCCTGCTGTTTGTAGCAGGTGCCGACCTTCTGCCGCTCCTGGTCGTTCATCAGCGGCAGGTTTACCACGCCAGGGAAGGCGCCTTTG > 5:26016/1‑149 GATGAACGACCAGGAGCGGCAGAAGGTCGGCACCTGCTACAAACAGCAGGGCCAGGCTGCCGCCATCGCCCTGGGCCACCAACTGGTCAGTGGCGCCACCAAGCAAGCCCGTCTGGAGGCCTGGGCAGCGTTTGCCAAGGCGCACCCTGACGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/961261‑961109‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gacggGCTTGCTTGGTGGCGCCACTGACCAGTTGGTGGCCCAGGGCGATGGCGGCAGCCTGGCCCTGCTGTTTGTAGCAGGTGCCGACCTTCTGCCGCTCCTGGTCGTTCATCAGCGGCAGGTTTACCACGCCAGGGAAGGCGCCTTTG > NC_002947/961154‑961297 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |