New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 1004713 | 44 (0.900) | 4 (0.090) | 4/250 | NT | 8.2% | coding (738/987 nt) | PP_0866 | transmembrane sensor |
? | NC_002947 | = 1004745 | 48 (1.030) | coding (770/987 nt) | PP_0866 | transmembrane sensor |
CGCCTGGACCCAGCCAGCACCCGTGTGGCGGTGGAACAGGGGTCGGTGCGGGTGCAGGGCAAGGGCGACTCGCCGGCGCAACTGACGGCCGGGCAGGGGTCGCATATAGATGCACAGGGCCTGGTCGCCGCACCCTATGCGGTCAACACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1004564‑1004713 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aacaccAGCTTGCCCTGTCGCCATGCGGTAATGGCGCCGGTGTTGACCGCATAGGGTGCGGCGACCAGGCCCTGTGCATCTATATGCGACCCCTGCCCGGCCGTCAGTTGCGCCGGCGAGTCGCCCTTGCCCTGCACCCGCACCGACCCCTGTT < NC_002947/1004745‑1004598 CGCCTGGACCCAGCCAGCACCCGTGTGGCGGTGGAACAGGGGTCGGTGCGGGTGCAGGGCAAGGGCGACTCGCCGGCGCAACTGACGGCCGGGCAGGGGTCGCATATAGATGCACAGGGCCTGGTCGCCGCACCCTATGCGGTCAACAC < 8:161809/149‑1 CCAGCCAGCACCCGTGTGGCGGTGGAACAGGGGTCGGTGCGGGTGCAGGGCAAGGGCGACTCGCCGGCGCAACTGACGGCCGGGCAGGGGTCGCATATAGATGCACAGGGCCTGGTCGCCGCACCCTATGCGGTCAACACCAGCTTGCC > 8:62253/1‑149 ACAGGGGTCGGTGCGGGTGCAGGGCAAGGGCGACTCGCCGGCGCAACTGACGGCCGGGCAGGGGTCGCATATAGATGCACAGGGCCTGGTCGCCGCACCCTATGCGGTCAAC > 7:119222/1‑112 ACAGGGGTCGGTGCGGGTGCAGGGCAAGGGCGACTCGCCGGCGCAACTGACGGCCGGGCAGGGGTCGCATATAGATGCACAGGGCCTGGTCGCCGCACCCTATGCGGTCAAC < 8:119222/112‑1 GTCGGTGCGGGTGCAGGGCAAGGGCGACTCGCCGGCGCAACTGACGGCCGGGCAGGGGTCGCATATAGATGCACAGGGCCTGGTCGCCGCACCCTATGCGGTCAACACCAGCTTGCCCTGTCGCCATGCGGTAATGGCGCCAGTGTTGA < 7:62253/149‑1 GGCAAGGGCGACTCGCCGGCGCAACTGACGGCCGGGCAGGGGTCGCATATAGATGCACAGGGCCTGGTCGCCGCACCCTATGCGGTCAACACCAGCTTGCCCTGTCGCCATGCGGTAATGGCGCCGGTGTTGAC > 7:235366/1‑134 GGCAAGGGCGACTCGCCGGCGCAACTGACGGCCGGGCAGGGGTCGCATATAGATGCACAGGGCCTGGTCGCCGCACCCTATGCGGTCAACACCAGCTTGCCCTGTCGCCATGCGGTAATGGCGCCGGTGTTGAC < 8:235366/134‑1 ACACCAGCTTGCCCTGTCGCCATGCGGTAATGGCGCCGGTGTTGACCGCATAGGGTGCGGCGACCAGGCCCTGTGCATCTATATGCGACCCCTGCCCGGCCGTCAGTTGCGCCGGCGAGTCGCCCTTGCCCTGCACCCGCACCGACCCC < 1:106718/149‑1 CAGCTTGCCCTGTCGCTATGCGGTAATGGCGCCGGTGTTGACCGCATAGGGTGCGGCGACCAGGCCCTGTGCATCTATATGCGACCCCTGCCCGGCCGTCAGTTGCGCCGGCGAGTCGCCCTTGCCCTGCACCCGCACCGACCCCTGTT > 6:284155/1‑149 CAGCTTGCCCTGTCGCCATGCGGTAATGGCGCCGGTGTTGACCGCATAGGGTGCGGCGACCAGGCCCTGTGCATCTATATGCGACCCCTGCCCGGCCGTCAGTTGCGCCGGCGAGTCGCCCTTGCCCTGCACCCGCACCGACCCCTGTT < 3:231693/149‑1 CAGCTTGCCCTGTCGCCATGCGGTAATGGCGCCGGTGTTGACCGCATAGGGTGCGGCGACCAGGCCCTGTGCATCTATATGCGACCCCTGCCCGGCCGTCAGTTGCGCCGGCGAGTCGCCCTTGCCCTGCACCCGCACCGACCCCTGTT > 4:231693/1‑149 CAGCCTGCCCTGTCGCCATGCGGTAATGGCGCCGGTGTTGACCGCATAGGGTGCGGCGACCAGGCCCTGTGCATCTATATGCGACCCCTGCCCGGCCGTCAGTTGCGCCGGCGAGTCGCCCTTGCCCT < 7:262834/128‑1 CAGCCTGCCCTGTCGCCATGCGGTAATGGCGCCGGTGTTGACCGCATAGGGTGCGGCGACCAGGCCCTGTGCATCTATATGCGACCCCTGCCCGGCCGTCAGTTGCGCCGGCGAGTCGCCCTTGCCCT > 8:262834/1‑128 CGCCTGGACCCAGCCAGCACCCGTGTGGCGGTGGAACAGGGGTCGGTGCGGGTGCAGGGCAAGGGCGACTCGCCGGCGCAACTGACGGCCGGGCAGGGGTCGCATATAGATGCACAGGGCCTGGTCGCCGCACCCTATGCGGTCAACACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1004564‑1004713 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aacaccAGCTTGCCCTGTCGCCATGCGGTAATGGCGCCGGTGTTGACCGCATAGGGTGCGGCGACCAGGCCCTGTGCATCTATATGCGACCCCTGCCCGGCCGTCAGTTGCGCCGGCGAGTCGCCCTTGCCCTGCACCCGCACCGACCCCTGTT < NC_002947/1004745‑1004598 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |